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Memory and Resting-State Connectivity in Acute Transient Global Amnesia: A Case-Control fMRI Study.

Code ↔ Paper

5 matches between paragraphs of the paper and lines of its authors' code, computed by the harvester (lexical-v1). Click a colored paragraph or line to see its counterpart.

The 5 matches
  1. [1] § Materials and Methods › Statistical Analysis ↔ analysis/functions.py, lines 129–219 · score 0.76 · Aligned Rank Transform, Post hoc, Shapiro, ART, ANOVA, scores
  2. [2] § Results › Functional MRI ↔ analysis/ICA.ipynb, lines 50–65 · score 0.73 · dorsal DMN, ventral DMN, right SN, voxel, ECN, ICA
  3. [3] § Materials and Methods › Neuropsychological Battery ↔ analysis/main_analysis.ipynb, lines 81–200 · score 0.58 · cued recall, free recall, anterograde memory, incidental, clap, Mnemosyne
  4. [4] § Materials and Methods › Statistical Analysis ↔ analysis/functions.py, lines 129–219 · score 0.58 · post hoc, Linear, predictors, variables, fitted, Model
  5. [5] § Results › Neuropsychological Results ↔ analysis/main_analysis.ipynb, lines 81–200 · score 0.54 · cued recall, free recall, Anterograde memory, incidental, AES, scores

Paper

Loaded from Europe PMC by your browser, not stored by OSCR: doi.org · Europe PMC

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The authors' code

Python · 785 lines · 34 KB · no license · 2 matches

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It can be read at the source: analysis/functions.py.

Overview

Authors: Elias El Otmani1, Emmanuel Barbeau2, Béatrice Lemesle3, Emilie Milongo‐Rigal3, Sophie Fernandez4, Sandrine Charpentier4,5, Jean‐François Albucher1,6, Nicolas Raposo1,6, Fabrice Bonneville1,7, Patrice Péran1, Jérémie Pariente1,3
  1. ToNIC Toulouse NeuroImaging Center, UMR 1214, Universit. De Toulouse, INSERM, Paul Sabatier University (UT3) Toulouse France
  2. CNRS, Cerco Toulouse France
  3. Department of Neurology Neuroscience Centre, Toulouse‐Purpan University Hospital Toulouse Cedex France
  4. Department of Emergency Medicine University Hospital of Toulouse Toulouse France
  5. Laboratory of Epidemiology and Analyses in Public Health UMR 1295 Inserm, Toulouse University France
  6. Department of Neurolog Clinical Investigation Center, CIC1436, Toulouse University Hospital Toulouse France
  7. Department of Neuroradiology University Hospital of Toulouse Toulouse France
Journal: Annals of clinical and translational neurology, article 10.1002/acn3.70396
Dates: received 16 February 2026; accepted 21 March 2026; published online 10 April 2026; in print April 2026
Type: Research article · Language: English
License: CC BY
Identifiers: DOI 10.1002/acn3.70396 · PMID 41958247 · PMCID PMC13394162 · OpenAlex W7153314802
Open access: gold, a free copy (OpenAlex)
Status: code verified
Categories: fMRI (modality), human (organism), cognitive (subfield)
Methods: Preprocessing, Statistics, Smoothing, state filtering, decompositions, Connectivity, fMRI & imaging
Keywords: episodic memory, memory networks, transient global amnesia
Topic: Memory and Neural Mechanisms (Cognitive Neuroscience, Neuroscience), according to OpenAlex
Citations: not cited yet (Europe PMC); 47 references in the paper

Abstract

Background and Objectives: Transient global amnesia (TGA) is a striking model of isolated amnesia. While hippocampal lesions are well described, the network‐level mechanisms and the precise neuropsychological profile remain debated. Our objective was thus to characterize functional and neuropsychological correlates of acute TGA and their longitudinal evolution.

Methods: Prospective, single‐center case–control study of 20 patients with acute TGA and 20 age‐ and sex‐matched healthy controls. All participants completed neuropsychological testing and underwent structural and functional MRI at three time points: acute phase (< 24 h from onset), day 3, and 3 months. Primary outcomes were neuropsychological performance across episodic, semantic, and metamemory domains and resting‐state fMRI connectivity within the episodic memory network. Secondary outcomes were functional connectivity within the Default Mode (DMN), Executive (ECN), and Salience (SN) networks.

Results: A total of 40 participants were included (20 patients with TGA, mean age 65.5 years, 45% women; 20 controls, mean age 64.3 years, 45% women). In patients, median delay from symptoms' onset to MRI was 6.67 h. Neuropsychologically, patients showed profound multimodal anterograde amnesia during the acute phase, resolving by 3 months. This deficit was largely isolated, sparing semantic memory and metamemory. Structurally, small bilateral lesions were present in most patients. Functionally, acute hypoconnectivity was observed within the extended hippocampal system, particularly between parahippocampal and cingulate cortices, normalizing by 3 months. No consistent disruption was found in large‐scale networks (default mode, executive control, salience).

Interpretation: TGA is associated with transient, selective hypoconnectivity within the mesiotemporal–cingulate episodic memory network, aligning with previous reports and further precising the functional anatomy. The finding of a profound anterograde amnesia was replicated and its recovery timecourse was elucidated. Semantic memory and metamemory remain preserved, clarifying inconsistencies in prior reports. These findings suggest that TGA reflects a transient limbic dysconnectivity syndrome rather than a diffuse network disorder, reconciling structural lesions with clinical and functional data.

Reproduced under the paper's license (CC BY), from the paper cited above.

Repository

Its files are read in the Code ↔ Paper reader above, with 5 matches between paragraphs and lines of code.

EliasElOtmani/TGA

License: none: the authors keep all their rights
State: the link answers, verified on 29 September 2026
Evidence: files inventoried
Commit: c950a5a092e4dcf92e29236d88503057babccfae, 13 February 2026
Languages: Jupyter (10), Python (2)
Size: 1,998 files, 12 scripts
Software Heritage: not archived
Found in: “Data Availability Statement”
Holds: 3 notebooks
Not found: README, license file, CITATION.cff, environment file, tests, continuous integration, documentation
Tools: Matplotlib (11 files), NumPy (11 files), pandas (9 files), SciPy (9 files), Pingouin (6 files), Plotly (6 files), seaborn (6 files), statsmodels (6 files), NiBabel (2 files), Nilearn (2 files)
Availability: 1 check, the latest on 29 September 2026: the link answers
  • 29 September 2026: the link answers
11 files, not copied: shown from their source

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The paper's code and data availability statement is in the Data section.

Tracing map

Proposed by the machine: these links were found in the paper and verified at the source, without human review. The map will receive a Zenodo DOI once one of the paper's authors has validated it with their ORCID.

What the map holds:

  • 1 repository of the authors' code, each at its verified commit, with its license and how the link was found in the paper;
  • 11 scripts, each with its path and the digest of its content;
  • 5 matches between paragraphs of the paper and lines of the code (method lexical-v1);
  • neither the text of the paper nor the code itself.

Its JSON (tracing-map.json) is deposited on Zenodo with its DOI once the map is validated.

Data

No dataset and no data link were found in the paper.

Data Availability Statement

Light data such as neuropsychological data, 1st‐level preprocessed fMRI ROI‐to‐ROI data and python codes are available at https://github.com/EliasElOtmani/TGA. Heavy data such as raw fMRI, ICA and MRI data are available upon request.

Reproduced under the paper's license (CC BY), from the paper cited above.

Versions

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Version 1, 29 September 2026: the first record

Recorded: type, language, journal, pages, dates, 11 authors, 3 keywords, 3 funders, 45 references.

Cite

This paper

El Otmani, E., Barbeau, E., Lemesle, B., Milongo‐Rigal, E., Fernandez, S., Charpentier, S., Albucher, J., Raposo, N., Bonneville, F., Péran, P., & Pariente, J. (2026). Memory and Resting-State Connectivity in Acute Transient Global Amnesia: A Case-Control fMRI Study. Annals of clinical and translational neurology, 10.1002/acn3.70396. https://doi.org/10.1002/acn3.70396

BibTeX

@article{elotmani2026memory,
author = {El Otmani, Elias and Barbeau, Emmanuel and Lemesle, Béatrice and Milongo‐Rigal, Emilie and Fernandez, Sophie and Charpentier, Sandrine and Albucher, Jean‐François and Raposo, Nicolas and Bonneville, Fabrice and Péran, Patrice and Pariente, Jérémie},
title = {{Memory and Resting-State Connectivity in Acute Transient Global Amnesia: A Case-Control fMRI Study}},
journal = {Annals of clinical and translational neurology},
year = {2026},
month = apr,
pages = {10.1002/acn3.70396},
publisher = {Wiley},
issn = {2328-9503},
doi = {10.1002/acn3.70396},
url = {https://doi.org/10.1002/acn3.70396},
pmid = {41958247},
pmcid = {PMC13394162}
}

RIS

TY - JOUR
AU - El Otmani, Elias
AU - Barbeau, Emmanuel
AU - Lemesle, Béatrice
AU - Milongo‐Rigal, Emilie
AU - Fernandez, Sophie
AU - Charpentier, Sandrine
AU - Albucher, Jean‐François
AU - Raposo, Nicolas
AU - Bonneville, Fabrice
AU - Péran, Patrice
AU - Pariente, Jérémie
TI - Memory and Resting-State Connectivity in Acute Transient Global Amnesia: A Case-Control fMRI Study
T2 - Annals of clinical and translational neurology
J2 - Ann Clin Transl Neurol
PY - 2026
DA - 2026/04/10
SP - 10.1002/acn3.70396
SN - 2328-9503
PB - Wiley
DO - 10.1002/acn3.70396
UR - https://doi.org/10.1002/acn3.70396
LA - en
ER -

CSL-JSON

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