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Intrinsic units: identifying a system's causal grain.

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  1. [1] § Examples › Example 2: coarse-graining ↔ marshall_intrinsic_units/marshall_intrinsic_units.py, lines 418–433 · score 0.50 · horizontal neighbor, vertical neighbor

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Python · 513 lines · 17 KB · GPL-3.0 · 1 match

  1. import pathlib
  2. import pickle
  3. import matplotlib.pyplot as plt
  4. import numpy as np
  5. import pyphi
  6. import pyphi.utils
  7. import pyphi.visualize
  8. from tqdm.auto import tqdm
  9. _BU_MICRO_SAVEDIR = "results/bu_micro" # "Binary units micro"
  10. _BBX_MACRO_SAVEDIR = "results/bbx_macro" # "Blackbox macro"
  11. _BBX_MICRO_SAVEDIR = "results/bbx_micro" # "Blackbox micro"
  12. _CG_MICRO_SAVEDIR = "results/cg_micro" # "Coarsegrain micro"
  13. _CG_MACRO_SAVEDIR = "results/cg_macro" # "Coarsegrain macro"
  14. _MIN_MICRO_SAVEDIR = "results/min_micro" # "Minimal micro"
  15. _MIN_MACRO_SAVEDIR = "results/min_macro" # "Minimal macro"
  16. _SFN_MICRO_SAVEDIR = "results/sfn_micro" # "Something from nothing"
  17. _SFNN_MICRO_SAVEDIR = "results/sfnn_micro" # "Something from nearly nothing"
  18. _SFS_MICRO_SAVEDIR = "results/sfs_micro" # "Something from something"
  19. def get_subsets_by_size(network):
  20. return {
  21. size: list(
  22. pyphi.utils.powerset(network.node_indices, min_size=size, max_size=size)
  23. )
  24. for size in range(1, len(network.node_indices) + 1)
  25. }
  26. def get_subsystem_string(network, subset):
  27. return "".join(sorted(np.array(network.node_labels)[list(subset)].tolist()))
  28. def run_example(
  29. network,
  30. network_state,
  31. subsystem_size=None,
  32. subsystem_index=None,
  33. verbose=1,
  34. savedir=None,
  35. ):
  36. # Create savedir if it does not already exist
  37. if savedir is not None:
  38. savedir = pathlib.Path(savedir)
  39. savedir.mkdir(parents=True, exist_ok=True)
  40. # Get specific subsystems to check
  41. if subsystem_size is not None:
  42. subsets = get_subsets_by_size(network)[subsystem_size]
  43. if subsystem_index is not None:
  44. subsets = [subsets[subsystem_index]]
  45. else: # Check all subsystems
  46. subsets = list(
  47. pyphi.utils.powerset(network.node_indices, nonempty=True, reverse=True)
  48. )
  49. sias = {}
  50. for subset in tqdm(subsets):
  51. # Print progress for user
  52. subsystem_string = get_subsystem_string(network, subset)
  53. if verbose:
  54. print(f"Doing {subsystem_string}...")
  55. # Do actual work
  56. subsystem = pyphi.Subsystem(network, network_state, subset)
  57. sias[subset] = subsystem.sia()
  58. # Print output and save
  59. if verbose == 1:
  60. print(f" φ_s: {[sias[subset].phi]}")
  61. elif verbose >= 2:
  62. print(sias[subset])
  63. if savedir is not None:
  64. with open(savedir / f"{subsystem_string}.pickle", "wb") as f:
  65. pickle.dump(sias[subset], f, protocol=pickle.HIGHEST_PROTOCOL)
  66. def summarize_example(network, savedir):
  67. savedir = pathlib.Path(savedir)
  68. subsets = get_subsets_by_size(network)
  69. with open(savedir / "summary.txt", "w") as f:
  70. for subsystem_size in range(1, len(network.node_indices) + 1):
  71. f.write(f"====={subsystem_size}-node subsystems=====\n")
  72. for subset in subsets[subsystem_size]:
  73. subsystem_string = get_subsystem_string(network, subset)
  74. subsystem_file = savedir / f"{subsystem_string}.pickle"
  75. if subsystem_file.exists():
  76. with open(subsystem_file, "rb") as pf:
  77. sia = pickle.load(pf)
  78. f.write(f"φ_s({subsystem_string}) = {sia.phi}\n")
  79. def run_binary_units_micro_example(savedir=_BU_MICRO_SAVEDIR, **kwargs):
  80. network, network_state = get_binary_units_micro_example()
  81. run_example(network, network_state, savedir=savedir, **kwargs)
  82. def summarize_binary_units_micro_example(savedir=_BU_MICRO_SAVEDIR):
  83. network, _ = get_binary_units_micro_example()
  84. summarize_example(network, savedir)
  85. def run_blackbox_micro_example(savedir=_BBX_MICRO_SAVEDIR, **kwargs):
  86. network, network_state = get_blackbox_micro_example()
  87. run_example(network, network_state, savedir=savedir, **kwargs)
  88. def summarize_blackbox_micro_example(savedir=_BBX_MICRO_SAVEDIR):
  89. network, _ = get_blackbox_micro_example()
  90. summarize_example(network, savedir)
  91. def run_blackbox_macro_example(savedir=_BBX_MACRO_SAVEDIR, **kwargs):
  92. network, network_state = get_blackbox_macro_example()
  93. run_example(network, network_state, savedir=savedir, **kwargs)
  94. def summarize_blackbox_macro_example(savedir=_BBX_MACRO_SAVEDIR):
  95. network, _ = get_blackbox_macro_example()
  96. summarize_example(network, savedir)
  97. def run_coarsegrain_micro_example(savedir=_CG_MICRO_SAVEDIR, **kwargs):
  98. network, network_state = get_coarsegrain_micro_example()
  99. run_example(network, network_state, savedir=savedir, **kwargs)
  100. def summarize_coarsegrain_micro_example(savedir=_CG_MICRO_SAVEDIR):
  101. network, _ = get_coarsegrain_micro_example()
  102. summarize_example(network, savedir)
  103. def run_coarsegrain_macro_example(savedir=_CG_MACRO_SAVEDIR, **kwargs):
  104. network, network_state = get_coarsegrain_macro_example()
  105. run_example(network, network_state, savedir=savedir, **kwargs)
  106. def summarize_coarsegrain_macro_example(savedir=_CG_MACRO_SAVEDIR):
  107. network, _ = get_coarsegrain_macro_example()
  108. summarize_example(network, savedir)
  109. def run_minimal_micro_example(savedir=_MIN_MICRO_SAVEDIR, **kwargs):
  110. network, network_state = get_minimal_micro_example()
  111. run_example(network, network_state, savedir=savedir, **kwargs)
  112. def summarize_minimal_micro_example(savedir=_MIN_MICRO_SAVEDIR):
  113. network, _ = get_minimal_micro_example()
  114. summarize_example(network, savedir)
  115. def run_minimal_macro_example(savedir=_MIN_MACRO_SAVEDIR, **kwargs):
  116. network, network_state = get_minimal_macro_example()
  117. run_example(network, network_state, savedir=savedir, **kwargs)
  118. def summarize_minimal_macro_example(savedir=_MIN_MACRO_SAVEDIR):
  119. network, _ = get_minimal_macro_example()
  120. summarize_example(network, savedir)
  121. def run_something_from_nothing_micro_example(savedir=_SFN_MICRO_SAVEDIR, **kwargs):
  122. network, network_state = get_something_from_nothing_micro_example()
  123. run_example(network, network_state, savedir=savedir, **kwargs)
  124. def summarize_something_from_nothing_micro_example(savedir=_SFN_MICRO_SAVEDIR):
  125. network, _ = get_something_from_nothing_micro_example()
  126. summarize_example(network, savedir)
  127. def run_something_from_nearly_nothing_micro_example(
  128. savedir=_SFNN_MICRO_SAVEDIR, **kwargs
  129. ):
  130. network, network_state = get_something_from_nearly_nothing_micro_example()
  131. run_example(network, network_state, savedir=savedir, **kwargs)
  132. def summarize_something_from_nearly_nothing_micro_example(savedir=_SFNN_MICRO_SAVEDIR):
  133. network, _ = get_something_from_nearly_nothing_micro_example()
  134. summarize_example(network, savedir)
  135. def run_something_from_something_micro_example(savedir=_SFS_MICRO_SAVEDIR, **kwargs):
  136. network, network_state = get_something_from_something_micro_example()
  137. run_example(network, network_state, savedir=savedir, **kwargs)
  138. def summarize_something_from_something_micro_example(savedir=_SFS_MICRO_SAVEDIR):
  139. network, _ = get_something_from_something_micro_example()
  140. summarize_example(network, savedir)
  141. def _get_iit4_fig6d_micro_tpm():
  142. node_labels = ("A", "B", "C", "D", "E", "F")
  143. network_size = len(node_labels)
  144. current_states = np.array(list(pyphi.utils.all_states(network_size)))
  145. tpm = np.zeros_like(current_states, dtype=float)
  146. k = 4
  147. for current_state, p in zip(current_states, tpm):
  148. # Convert 0s to -1s for sigmoidal activation function
  149. current_state = np.where(current_state == 0, -1, current_state)
  150. total_input = np.sum(current_state)
  151. prob = 1.0 / (1.0 + np.exp(-k * total_input))
  152. p[:] = prob
  153. return tpm, current_states, node_labels
  154. def get_iit4_fig6d():
  155. tpm, _, node_labels = _get_iit4_fig6d_micro_tpm()
  156. network = pyphi.Network(tpm, node_labels=node_labels)
  157. state = (1, 0, 0, 0, 0, 0)
  158. return network, state
  159. def get_binary_units_micro_example():
  160. tpm = np.array(
  161. [
  162. [1, 1, 1],
  163. [0, 1, 0],
  164. [0, 0, 0],
  165. [1, 1, 0],
  166. [0, 0, 1],
  167. [0, 1, 1],
  168. [1, 0, 1],
  169. [1, 0, 0],
  170. ]
  171. )
  172. node_labels = ("A", "B", "C")
  173. network = pyphi.Network(tpm, node_labels=node_labels)
  174. state = (0, 0, 0)
  175. return network, state
  176. def _get_blackbox_example_micro_tpm():
  177. node_labels = ("A", "B", "C", "D", "E", "F", "G", "H")
  178. network_size = len(node_labels)
  179. current_states = np.array(list(pyphi.utils.all_states(network_size)))
  180. tpm = np.zeros_like(current_states, dtype=float)
  181. for current_state, p in zip(current_states, tpm):
  182. p[0] = (
  183. 0.01
  184. + 0.01 * current_state[0]
  185. + 0.1 * current_state[3]
  186. + 0.8 * current_state[6]
  187. + 0.05 * current_state[1]
  188. ) # A
  189. p[1] = (
  190. 0.01
  191. + 0.01 * current_state[1]
  192. + 0.1 * current_state[3]
  193. + 0.8 * current_state[6]
  194. + 0.05 * current_state[0]
  195. ) # B
  196. p[2] = (
  197. 0.01
  198. + 0.01 * current_state[2]
  199. + 0.85 * int(current_state[0] + current_state[1] > 0)
  200. + 0.1 * int(current_state[0] + current_state[1] == 2)
  201. ) # C
  202. p[3] = (
  203. 0.01
  204. + 0.01 * current_state[3]
  205. + 0.85 * current_state[2]
  206. + 0.05 * (current_state[0] + current_state[1])
  207. ) # D
  208. p[4] = (
  209. 0.01
  210. + 0.01 * current_state[4]
  211. + 0.1 * current_state[7]
  212. + 0.8 * current_state[2]
  213. + 0.05 * current_state[5]
  214. ) # E
  215. p[5] = (
  216. 0.01
  217. + 0.01 * current_state[5]
  218. + 0.1 * current_state[7]
  219. + 0.8 * current_state[2]
  220. + 0.05 * current_state[4]
  221. ) # F
  222. p[6] = (
  223. 0.01
  224. + 0.01 * current_state[6]
  225. + 0.85 * int(current_state[4] + current_state[5] > 0)
  226. + 0.1 * int(current_state[4] + current_state[5] == 2)
  227. ) # G
  228. p[7] = (
  229. 0.01
  230. + 0.01 * current_state[7]
  231. + 0.85 * current_state[6]
  232. + 0.05 * (current_state[4] + current_state[5])
  233. ) # H
  234. return tpm, current_states, node_labels
  235. def get_blackbox_micro_example():
  236. tpm, _, node_labels = _get_blackbox_example_micro_tpm()
  237. network = pyphi.Network(tpm, node_labels=node_labels)
  238. state = (1, 1, 1, 1, 1, 1, 1, 1)
  239. return network, state
  240. def _get_blackbox_example_macro_tpm():
  241. micro_tpm, micro_states, _ = _get_blackbox_example_micro_tpm()
  242. tpm = pyphi.convert.sbn2sbs(micro_tpm)
  243. tpm2 = np.dot(tpm, tpm) # Take tau=2
  244. D00 = np.where((micro_states[:, 2] == 0) & (micro_states[:, 6] == 0))[0]
  245. D10 = np.where((micro_states[:, 2] == 1) & (micro_states[:, 6] == 0))[0]
  246. D01 = np.where((micro_states[:, 2] == 0) & (micro_states[:, 6] == 1))[0]
  247. D11 = np.where((micro_states[:, 2] == 1) & (micro_states[:, 6] == 1))[0]
  248. Dalpha0 = np.where(micro_states[:, 2] == 0)[0]
  249. Dalpha1 = np.where(micro_states[:, 2] == 1)[0]
  250. Dbeta0 = np.where(micro_states[:, 6] == 0)[0]
  251. Dbeta1 = np.where(micro_states[:, 6] == 1)[0]
  252. assert micro_tpm.shape[0] == 2**8
  253. assert micro_tpm.shape[1] == 8
  254. macro_network_size = 2
  255. macro_states = np.array(list(pyphi.utils.all_states(macro_network_size)))
  256. macro_tpm = np.zeros_like(macro_states, dtype=float) # state-by-node
  257. macro_node_labels = ("α", "β")
  258. macro_tpm[0, 0] = np.mean(np.sum(tpm2[D00[:, np.newaxis], Dalpha1], axis=1))
  259. macro_tpm[0, 1] = np.mean(np.sum(tpm2[D00[:, np.newaxis], Dbeta1], axis=1))
  260. macro_tpm[1, 0] = np.mean(np.sum(tpm2[D10[:, np.newaxis], Dalpha1], axis=1))
  261. macro_tpm[1, 1] = np.mean(np.sum(tpm2[D10[:, np.newaxis], Dbeta1], axis=1))
  262. macro_tpm[2, 0] = np.mean(np.sum(tpm2[D01[:, np.newaxis], Dalpha1], axis=1))
  263. macro_tpm[2, 1] = np.mean(np.sum(tpm2[D01[:, np.newaxis], Dbeta1], axis=1))
  264. macro_tpm[3, 0] = np.mean(np.sum(tpm2[D11[:, np.newaxis], Dalpha1], axis=1))
  265. macro_tpm[3, 1] = np.mean(np.sum(tpm2[D11[:, np.newaxis], Dbeta1], axis=1))
  266. return macro_tpm, macro_states, macro_node_labels
  267. def get_blackbox_macro_example():
  268. tpm, _, node_labels = _get_blackbox_example_macro_tpm()
  269. network = pyphi.Network(tpm, node_labels=node_labels)
  270. state = (1, 1)
  271. return network, state
  272. def get_coarsegrain_micro_example():
  273. tpm = np.array(
  274. [
  275. [0.05, 0.05, 0.05, 0.05],
  276. [0.06, 0.15, 0.05, 0.05],
  277. [0.15, 0.06, 0.05, 0.05],
  278. [0.16, 0.16, 0.85, 0.85],
  279. [0.05, 0.05, 0.06, 0.15],
  280. [0.06, 0.15, 0.06, 0.15],
  281. [0.15, 0.06, 0.06, 0.15],
  282. [0.16, 0.16, 0.86, 0.95],
  283. [0.05, 0.05, 0.15, 0.06],
  284. [0.06, 0.15, 0.15, 0.06],
  285. [0.15, 0.06, 0.15, 0.06],
  286. [0.16, 0.16, 0.95, 0.86],
  287. [0.85, 0.85, 0.16, 0.16],
  288. [0.86, 0.95, 0.16, 0.16],
  289. [0.95, 0.86, 0.16, 0.16],
  290. [0.96, 0.96, 0.96, 0.96],
  291. ]
  292. )
  293. node_labels = ("A", "B", "C", "D")
  294. network = pyphi.Network(tpm, node_labels=node_labels)
  295. state = (0, 0, 0, 0)
  296. return network, state
  297. def get_coarsegrain_macro_example():
  298. tpm = np.array(
  299. [[0.006833, 0.006833], [0.0256, 0.7855], [0.7855, 0.0256], [0.9212, 0.9212]]
  300. )
  301. node_labels = ("α", "β")
  302. network = pyphi.Network(tpm, node_labels=node_labels)
  303. state = (0, 0)
  304. return network, state
  305. def get_minimal_micro_example():
  306. tpm = np.array(
  307. [
  308. [0.05, 0.05],
  309. [0.05, 0.06],
  310. [0.06, 0.05],
  311. [0.95, 0.95],
  312. ]
  313. )
  314. node_labels = ("A", "B")
  315. network = pyphi.Network(tpm, node_labels=node_labels)
  316. state = (0, 0)
  317. return network, state
  318. def get_minimal_macro_example():
  319. tpm = np.array([[0.05 * 0.05 + 2 * 0.01 * 0.05 / 3], [(1 - 0.05) * (1 - 0.05)]])
  320. node_labels = ("α",)
  321. network = pyphi.Network(tpm, node_labels=node_labels)
  322. state = (0,)
  323. return network, state
  324. def get_dancing_couple_node(
  325. current_state: np.ndarray,
  326. self_index: int,
  327. horizontal_neighbor: int,
  328. vertical_neighbor: int,
  329. w_vertical: float,
  330. w_base: float = 0.05,
  331. w_self: float = 0.05,
  332. w_horizontal: float = 0.6,
  333. ) -> float:
  334. return (
  335. w_base
  336. + w_self * current_state[self_index]
  337. + w_horizontal * current_state[horizontal_neighbor]
  338. + w_vertical * current_state[vertical_neighbor]
  339. )
  340. def get_dancing_couples_network(w_vertical: float) -> np.ndarray:
  341. node_labels = ("A", "B", "C", "D")
  342. connectivity = {
  343. 0: {"horizontal_neighbor": 1, "vertical_neighbor": 2},
  344. 1: {"horizontal_neighbor": 0, "vertical_neighbor": 3},
  345. 2: {"horizontal_neighbor": 3, "vertical_neighbor": 0},
  346. 3: {"horizontal_neighbor": 2, "vertical_neighbor": 1},
  347. }
  348. network_size = len(node_labels)
  349. current_states = np.array(list(pyphi.utils.all_states(network_size)))
  350. tpm = np.zeros_like(current_states, dtype=float)
  351. for current_state, p in zip(current_states, tpm):
  352. for i in connectivity:
  353. p[i] = get_dancing_couple_node(
  354. current_state,
  355. i,
  356. connectivity[i]["horizontal_neighbor"],
  357. connectivity[i]["vertical_neighbor"],
  358. w_vertical=w_vertical,
  359. )
  360. return pyphi.Network(tpm, node_labels=node_labels)
  361. def get_something_from_nothing_micro_example():
  362. network = get_dancing_couples_network(w_vertical=0.00)
  363. state = (0, 0, 0, 0)
  364. return network, state
  365. def get_something_from_nearly_nothing_micro_example():
  366. network = get_dancing_couples_network(w_vertical=0.01)
  367. state = (0, 0, 0, 0)
  368. return network, state
  369. def get_something_from_something_micro_example():
  370. network = get_dancing_couples_network(w_vertical=0.25)
  371. state = (0, 0, 0, 0)
  372. return network, state
  373. #### Plotting functions #####
  374. def plot_sbs_tpm(network, use_node_labels=True, height=None):
  375. def _italicize(text):
  376. return "$\it{" + "".join(text) + "}$"
  377. sbs = pyphi.convert.state_by_node2state_by_state(network.tpm)
  378. states_labels = list(pyphi.utils.all_states(network.size))
  379. if use_node_labels:
  380. state_labels = [
  381. pyphi.visualize.phi_structure.text.Labeler(
  382. state, network.node_labels, postprocessor=_italicize
  383. ).nodes(network.node_indices)
  384. for state in states_labels
  385. ]
  386. figsize = None if height is None else (height, height)
  387. fig, ax = plt.subplots(figsize=figsize)
  388. ax.pcolormesh(sbs, edgecolors="k", linewidth=0.5, cmap="Greys", vmin=0, vmax=1)
  389. ax.tick_params(
  390. top=False,
  391. labeltop=use_node_labels,
  392. bottom=False,
  393. labelbottom=False,
  394. left=False,
  395. labelleft=use_node_labels,
  396. )
  397. if use_node_labels:
  398. ax.set_xticks(
  399. np.arange(len(state_labels)) + 0.5, labels=state_labels, rotation=90
  400. )
  401. ax.set_yticks(np.arange(len(state_labels)) + 0.5, labels=state_labels)
  402. ax.set_aspect("equal")
  403. ax.invert_yaxis()
  404. return fig, ax

marshall_intrinsic_units.py at commit 48471b5, under GPL-3.0 · at the source

Overview

Authors: William Marshall1, Graham Findlay2, Larissa Albantakis2, Giulio Tononi2
  1. Department of Mathematics and Statistics, Brock University, 1812 Sir Isaac Brock Way, St. Catharines, Ontario, L2S 3A1, Canada
  2. Department of Psychiatry, University of Wisconsin-Madison, 6001 Research Park Blvd, Madison, WI, 53719, United States
Institutions: Brock University (Canada); University of Wisconsin–Madison (United States)
Journal: Neuroscience of consciousness, volume 2026, issue 1, article niag013
Dates: received 10 January 2025; accepted 13 February 2026; published online 15 April 2026
Type: Research article · Language: English
License: CC BY
Identifiers: DOI 10.1093/nc/niag013 · PMID 41993058 · PMCID PMC13082400 · OpenAlex W7154469130
Open access: gold, a free copy (OpenAlex)
Status: code verified
Categories: computational modeling (no new data) (modality), none (in silico) (organism)
Keywords: theories and models, philosophy, consciousness, computational modeling, integrated information, causal emergence
Topic: Embodied and Extended Cognition (Cognitive Neuroscience, Neuroscience), according to OpenAlex
Funding: Templeton World Charity Foundation (Templeton World Charity Foundation, Inc.) (TWCF 0216); David P White Chair in Sleep Medicine at the University of Wisconsin-Madison; Tiny Blue Dot Foundation (UW 133AAG3451); Natural Sciences and Engineering Research Council of Canada (RGPIN-2019-05418)
Citations: not cited yet (Europe PMC); 49 references in the paper

Abstract

Integrated information theory (IIT) aims to account for the quality and quantity of consciousness in physical terms. According to IIT, a substrate of consciousness must be a system of units (e.g. synapses, neurons, minicolumns, etc.) that is a maximum of intrinsic, specific, unitary cause-effect power, quantified by integrated information (). The grain of each unit must be the one—from micro (finer) to macro (coarser)—that maximizes the system’s integrated information. Here we provide a framework for computing the integrated information of systems whose constituents include macro units, and in doing so provide the means to identify a system’s intrinsic units—those that constitute the system from its intrinsic perspective, and directly account for its experience. First, we formalize what it means for these units, as part of a substrate of consciousness, to satisfy IIT’s postulates of physical existence. Next, we extend the mathematical framework of IIT 4.0 to assess cause-effect power across grains. Then, using simple, simulated systems, we show that the integrated information of systems containing macro units can be higher than that of corresponding systems of micro units. Three examples highlight specific kinds of macro units, and how each kind can increase cause-effect power. The implications of the framework are discussed in the broader context of IIT, including how it provides a foundation for tests and inferences about consciousness.

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Zenodo 11211435

License: GPL-3.0
State: the link answers, verified on 29 September 2026
Evidence: files inventoried
Size: 1 file
Software Heritage: not checked
Found in: the references
Not found: README, license file, CITATION.cff, environment file, tests, continuous integration, documentation
Tools: Matplotlib (2 files), NumPy (2 files)
Availability: 1 check, the latest on 29 September 2026: the link answers (HTTP 200)
  • 29 September 2026: the link answers (HTTP 200)
15 files
At the source:

csc-uw/marshall-intrinsic-units

License: GPL-3.0
State: the link answers, verified on 29 September 2026
Evidence: files inventoried
Commit: 48471b5d43e1453ac536cd4d3a5c48820cbe73cc, 22 September 2025
Languages: Python (12), Jupyter (1)
Size: 30 files, 13 scripts
Software Heritage: not archived
Found in: the Zenodo archive record
Holds: README, license file, CITATION.cff, environment (pyproject.toml, uv.lock), 1 notebook
Not found: tests, continuous integration, documentation
Tools: Matplotlib (2 files), NumPy (2 files)
Availability: 1 check, the latest on 29 September 2026: the link answers
  • 29 September 2026: the link answers
15 files

The paper's code and data availability statement is in the Data section.

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Data

No dataset and no data link were found in the paper.

Data availability

No new data were generated or analysed in support of this research. All code used to obtain figures and examples can be found at (Findlay and Marshall, 2025).

Reproduced under the paper's license (CC BY), from the paper cited above.

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Version 1, 29 September 2026: the first record

Recorded: type, language, journal, volume, issue, pages, dates, 4 authors, 6 keywords, 4 funders, 43 references.

Cite

This paper

Marshall, W., Findlay, G., Albantakis, L., & Tononi, G. (2026). Intrinsic units: identifying a system's causal grain. Neuroscience of consciousness, 2026(1), niag013. https://doi.org/10.1093/nc/niag013

BibTeX

@article{marshall2026intrinsic,
author = {Marshall, William and Findlay, Graham and Albantakis, Larissa and Tononi, Giulio},
title = {{Intrinsic units: identifying a system's causal grain}},
journal = {Neuroscience of consciousness},
year = {2026},
month = apr,
volume = {2026},
number = {1},
pages = {niag013},
publisher = {Oxford University Press},
issn = {2057-2107},
doi = {10.1093/nc/niag013},
url = {https://doi.org/10.1093/nc/niag013},
pmid = {41993058},
pmcid = {PMC13082400}
}

RIS

TY - JOUR
AU - Marshall, William
AU - Findlay, Graham
AU - Albantakis, Larissa
AU - Tononi, Giulio
TI - Intrinsic units: identifying a system's causal grain
T2 - Neuroscience of consciousness
J2 - Neurosci Conscious
PY - 2026
DA - 2026/04/15
VL - 2026
IS - 1
SP - niag013
SN - 2057-2107
PB - Oxford University Press
DO - 10.1093/nc/niag013
UR - https://doi.org/10.1093/nc/niag013
LA - en
ER -

CSL-JSON

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