OSCR

Hadamard-encoded scattered light imaging for faster, signal-enhanced mapping of brain fiber orientations.

Overview

Authors: Dennis Scheidt1, Felix Matuschke1, Katrin Amunts1,2, Miriam Menzel1,3, Markus Axer1,4
  1. Institute of Neuroscience and Medicine (INM-1), Forschungszentrum Jülich GmbH, Wllhelm-Johnen-Straße, Jülich 52425, Germany
  2. C. & O. Institute of Brain Research, Heinrich-Heine University Düsseldorf, Merowinger Platz 1a, Düsseldorf, Germany
  3. Department of Imaging Physics, Delft University of Technology, Lorentzweg 1, Delft 2628 CJ, The Netherlands
  4. School of Mathematics and Natural Sciences, University of Wuppertal, Gaussstraße, Wuppertal, Germany
Journal: Biomedical optics express, volume 17, issue 7, pages 3854-3876
Dates: received 11 March 2026; accepted 14 June 2026; published online 25 June 2026
Type: Research article · Language: English
License: none stated
Identifiers: DOI 10.1364/boe.596576 · PMID 42460360 · PMCID PMC13372345 · OpenAlex W7164928851
Open access: gold, a free copy (OpenAlex)
Status: code found, not verified yet
Methods: Preprocessing
Topic: Optical Imaging and Spectroscopy Techniques (Radiology, Nuclear Medicine and Imaging, Medicine), according to OpenAlex
Funding: Deutsche Forschungsgemeinschaft (498596755); European Union (Horizon Program No. 101147319); Commissariat à l'Énergie Atomique et aux Énergies Alternatives (AIDAS)
Citations: not cited yet (Europe PMC); 36 references in the paper

Abstract

The abstract is not reproduced here: the paper's license (none stated) does not allow it. Read it in the paper, at the publisher or on Europe PMC.

Code

No file of the authors' code could be read here: it is described below, and read at its source.

boe-17-7-3854-s001.pdf

License: none: the authors keep all their rights
State: unreachable at the last attempt, verified on 29 September 2026
Evidence: found in the paper
Software Heritage: not checked
Found in: “Data availability”
Not found: README, license file, CITATION.cff, environment file, tests, continuous integration, documentation
Availability: 4 checks, the latest on 29 September 2026: unreachable at the last attempt
  • 29 September 2026: unreachable at the last attempt
  • 28 September 2026: unreachable at the last attempt
  • 28 September 2026: unreachable at the last attempt
  • 27 September 2026: unreachable at the last attempt
At the source: boe-17-7-3854-s001.pdf

The paper's code and data availability statement is in the Data section.

Tracing map

Proposed by the machine: these links were found in the paper and verified at the source, without human review. The map will receive a Zenodo DOI once one of the paper's authors has validated it with their ORCID.

What the map holds:

  • 1 repository of the authors' code, each at its verified commit, with its license and how the link was found in the paper;
  • 0 scripts, each with its path and the digest of its content;
  • no match between paragraphs and code yet;
  • neither the text of the paper nor the code itself.

Its JSON (tracing-map.json) is deposited on Zenodo with its DOI once the map is validated.

Data

No dataset and no data link were found in the paper.

Code and data availability statement

The paper has a code and data availability statement. Its license (none stated) does not allow reproducing it here; in short, from what the harvester recognized in it:

Read it in the paper: doi.org/10.1364/boe.596576.

Versions

The history of this record: each version stored by the harvester or made by a correction of its authors or of the maintainers of its code, and what changed in its facts. The texts of the paper (its abstract, its availability statements) are not part of it; versions that changed only those are not listed.

Version 1, 27 September 2026: the first record

Recorded: type, language, journal, volume, issue, pages, dates, 5 authors, 3 funders, 30 references.

Cite

This paper

Scheidt, D., Matuschke, F., Amunts, K., Menzel, M., & Axer, M. (2026). Hadamard-encoded scattered light imaging for faster, signal-enhanced mapping of brain fiber orientations. Biomedical optics express, 17(7), 3854-3876. https://doi.org/10.1364/boe.596576

BibTeX

@article{scheidt2026hadamard,
author = {Scheidt, Dennis and Matuschke, Felix and Amunts, Katrin and Menzel, Miriam and Axer, Markus},
title = {{Hadamard-encoded scattered light imaging for faster, signal-enhanced mapping of brain fiber orientations}},
journal = {Biomedical optics express},
year = {2026},
month = jun,
volume = {17},
number = {7},
pages = {3854--3876},
publisher = {Optica Publishing Group},
issn = {2156-7085},
doi = {10.1364/boe.596576},
url = {https://doi.org/10.1364/boe.596576},
pmid = {42460360},
pmcid = {PMC13372345}
}

RIS

TY - JOUR
AU - Scheidt, Dennis
AU - Matuschke, Felix
AU - Amunts, Katrin
AU - Menzel, Miriam
AU - Axer, Markus
TI - Hadamard-encoded scattered light imaging for faster, signal-enhanced mapping of brain fiber orientations
T2 - Biomedical optics express
J2 - Biomed Opt Express
PY - 2026
DA - 2026/06/25
VL - 17
IS - 7
SP - 3854
EP - 3876
SN - 2156-7085
PB - Optica Publishing Group
DO - 10.1364/boe.596576
UR - https://doi.org/10.1364/boe.596576
LA - en
ER -

CSL-JSON

{
"id": "10.1364/boe.596576",
"type": "article-journal",
"title": "Hadamard-encoded scattered light imaging for faster, signal-enhanced mapping of brain fiber orientations",
"container-title": "Biomedical optics express",
"author": [
{
"family": "Scheidt",
"given": "Dennis"
},
{
"family": "Matuschke",
"given": "Felix"
},
{
"family": "Amunts",
"given": "Katrin"
},
{
"family": "Menzel",
"given": "Miriam"
},
{
"family": "Axer",
"given": "Markus"
}
],
"container-title-short": "Biomed Opt Express",
"volume": "17",
"issue": "7",
"page": "3854-3876",
"DOI": "10.1364/boe.596576",
"PMID": "42460360",
"PMCID": "PMC13372345",
"ISSN": "2156-7085",
"publisher": "Optica Publishing Group",
"URL": "https://doi.org/10.1364/boe.596576",
"language": "en",
"issued": {
"date-parts": [
[
2026,
6,
25
]
]
}
}

The tracing map gets a citation of its own once an author has validated it and it has a DOI.

Similar papers

The papers with a page that share the most with this one: the tools found in their code, their categories, datasets, cited references and authors, the rarest counting most.

[1] doi:10.1038/s41592-026-03194-8 [code]
Beyond benchmarking: an expert-guided consensus approach to spatially aware clustering.
Journal: Nature methods
In common: 1 reference
[2] doi:10.1038/s41598-026-54678-8 [code]
Neural correlates of appetitive extinction learning: an fMRI study with actively participating pigeons.
Journal: Scientific reports
In common: 1 reference
[3] doi:10.1002/mds.70355 [code]
Gray Matter Microstructure Measured Using Diffusion Imaging as a Biomarker of Severity in Lewy Body Diseases.
Journal: Movement disorders : official journal of the Movement Disorder Society
In common: 1 reference
[4] doi:10.1111/pcn.70075
Network-level disconnectivity tracks poststroke depressive symptom improvement.
Journal: Psychiatry and clinical neurosciences
In common: 1 reference
[5] doi:10.1117/1.nph.13.2.025011 [code]
Measurement of the absolute value of the optical birefringence of myelin in primate brain tissue.
Journal: Neurophotonics
In common: 1 reference
[6] doi:10.1162/imag.a.1341 [code]
Massively parallelized brain tractography using compute clusters, supercomputers, and graphics processing units.
Journal: Imaging neuroscience (Cambridge, Mass.)
In common: 1 reference
[7] doi:10.1073/pnas.2533168123 [code]
Dendritic morphology and synaptic nonlinearities enhance functional complexity in human cortical neurons.
Journal: Proceedings of the National Academy of Sciences of the United States of America
In common: 1 reference
[8] doi:10.1002/hbm.70519 [code]
Lifespan Trajectories of Asymmetry in White Matter Tracts.
Journal: Human brain mapping
In common: 1 reference
[9] doi:10.1162/imag.a.1234 [code]
Multiscale parcellation of dynamic causal models of the brain.
Journal: Imaging neuroscience (Cambridge, Mass.)
In common: 1 reference
[10] doi:10.1007/s00429-026-03109-5
Receptor architecture of the macaque lateral geniculate nucleus.
Journal: Brain structure & function
In common: 1 reference

Contribute

The authors of this paper can claim it, correct its record and validate its tracing map, and the maintainers of its code (its owner, or a public member of its organization) correct what it says of their repository; anyone signed in can ask for its removal. Every request goes to OSCR's own machine, which answers it; your account page follows them.

Sign in with ORCID to claim this paper as one of its authors, correct its record or validate its tracing map: when the paper's metadata lists your ORCID iD, you are recognized at once. Maintainers of its code: sign in with GitHub, then claim the repository on your account page.

Request its removal

To ask OSCR to remove this record, the copies of its authors' scripts or its tracing map, use the removal request page: signed in, you say who you are, what to remove and why, then review and confirm the request. Published rules decide every request (how).

Discussion, reproductions, activity

Discussion: questions and error reports about this paper and its code, from signed-in readers and its authors. It opens with sign-in.

Reproductions: reports from readers who ran the authors' code: what they reproduced, with which environment, commit and data. It opens with sign-in.

Activity: what happens around this paper: new versions of its record, its map's validation, discussions and reproductions. It opens with sign-in.