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Mood modulations of emotional word processing: A predictive perspective view of EEG data.

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  1. [1] § Method › Analysis › ERP ↔ Scripts/ERP_LMM.R, lines 84 to 135 · score 0.50 · singular fit, Treatment, permutation, clusters, predictors, model · Report a mismatch

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The authors' code

R · 315 lines · 9.4 KB · no license · 1 match

  1. # ERP Mood-Valence study_words
  2. # ERP_LMM
  3. # libraries
  4. {
  5. library(rstatix)
  6. library(ggplot2)
  7. library(ggpubr)
  8. library(car)
  9. library(plyr)
  10. library(dplyr)
  11. library(psych)
  12. library(hrbrthemes)
  13. library(devtools)
  14. library(emmeans)
  15. library(tidyverse)
  16. library(hrbrthemes)
  17. library(viridis)
  18. library(effects)
  19. library(afex) # for 'allFit' on lmer models
  20. library(xtable) # for printing latex-tables
  21. library(sjPlot) # for plotting interactions in LMMs
  22. library(sjmisc) # for plotting interactions in LMMs
  23. }
  24. setwd("D:/Desktop/...")
  25. # Mac:
  26. setwd("/Users/el1445ko/Desktop/...")
  27. # ==========================================================================
  28. # datasets:
  29. # permutation cluster 1, N1 parietal ((Hi-Neu)Happy-Ctrl), electrodes CP3P3P5P1PO3PO7
  30. erp <- read.csv2(file = "N1_cluster1_trials.csv", fileEncoding = "UTF-8-BOM")
  31. # permutation cluster 2, N1 frontal ((Hi-Neu)Happy-Ctrl), electrodes F8FT8T8AF8C6FT10
  32. erp <- read.csv2(file = "N1_cluster2_trials.csv", fileEncoding = "UTF-8-BOM")
  33. # permutation cluster 3, N1 parietal ((Hi-Low)Happy-Ctrl), electrodes P1P2PzO1O2OzPO4POz
  34. erp <- read.csv2(file = "N1_cluster3_trials.csv", fileEncoding = "UTF-8-BOM")
  35. # permutation cluster 4, P2 frontal ((Hi-Low)Happy-Ctrl), electrodes F7F5F3FT7FC5AF7AF3
  36. erp <- read.csv2(file = "P2_cluster1_trials.csv", fileEncoding = "UTF-8-BOM")
  37. # permutation cluster 5, P2 frontal ((Neu-Low)Happy-Ctrl), electrodes F7F5F3F1FzFT7FC5FC3FC1AF3C3
  38. erp <- read.csv2(file = "P2_cluster2_trials.csv", fileEncoding = "UTF-8-BOM")
  39. # permutation cluster 6, EPN parietal ((Hi-Neu)Happy-Sad), electrodes CP5CP3P7P3PO7PO3
  40. erp <- read.csv2(file = "EPN_cluster1_trials.csv", fileEncoding = "UTF-8-BOM")
  41. # factors
  42. erp$participant = as.factor(erp$participant)
  43. erp$mood = as.factor(erp$mood)
  44. erp$valence = as.factor(erp$valence)
  45. erp$score = as.numeric(erp$score)
  46. erp$item = as.factor(erp$item)
  47. erp$condition <- NULL
  48. erp$itemID <- NULL
  49. # reorder levels of mood and valence
  50. erp$mood <- factor(erp$mood, levels = c("base", "happy", "sad"))
  51. erp$valence <- factor(erp$valence, levels = c("neut", "high", "low"))
  52. # head(erp, 3)
  53. summary(erp)
  54. str(erp)
  55. describe(erp)
  56. # View(erp)
  57. ## sample balance:
  58. table(erp$valence, erp$mood)
  59. # visual inspection:
  60. (QQ <- ggqqplot(erp, "score", ggtheme = theme_bw()) +
  61. facet_grid(mood ~ valence, labeller = "label_both"))
  62. (Density <- ggplot(erp, aes(x=score))+
  63. geom_density(alpha = 0.5, fill = '#E69F00')+
  64. facet_grid(mood ~ valence))
  65. ## boxplot
  66. erp %>%
  67. ggplot(aes(x=mood, y=score, fill=valence)) +
  68. geom_boxplot() +
  69. scale_fill_viridis(discrete = TRUE, alpha=0.6) +
  70. # geom_jitter(aes(color=valence), width = 0.25, size=3, alpha=0.9) +
  71. theme_ipsum() +
  72. theme(
  73. legend.position="bottom",
  74. plot.title = element_text(size=20)
  75. ) +
  76. ggtitle("N1") +
  77. xlab("")
  78. ## boxplot by predictor
  79. par(mfrow=c(1, 2))
  80. plot(erp$mood, erp$score, pch=16); lines(lowess(erp$score ~ erp$mood))
  81. plot(x=erp$valence, y=erp$score, pch=16); lines(lowess(erp$score ~ erp$valence))
  82. par(mfrow=c(1, 1))
  83. # ==========================================================================
  84. # models
  85. # treatment coding for both predictors, since reflects the permutation contrasts
  86. summary(model1 <- lmer(score ~ valence * mood + (1 + mood | participant) + (1 | item),
  87. contrasts = list(mood = contr.treatment(3, base = 1),
  88. valence = contr.treatment(3, base = 1)),
  89. data = erp,REML = FALSE))
  90. # N1_1: singular fit
  91. # N1_2: singular fit
  92. # N1_3: failed to converge
  93. # P2_1: singular fit
  94. # P2_2: singular fit
  95. # EPN_1: converged
  96. performance::r2(model1)
  97. summary(model2 <- lmer(score ~ valence * mood + (1 | participant) + (1 | item),
  98. contrasts = list(mood = contr.treatment(3, base = 1),
  99. valence = contr.treatment(3, base = 1)),
  100. data = erp, REML = FALSE))
  101. # converged for all clusters
  102. performance::r2(model2)
  103. anova(model2)
  104. # summary(rePCA(model2))
  105. # Confint(model2) # confidence intervals
  106. plot(model2)
  107. plot(residuals(model2))
  108. hist(residuals(model2))
  109. qqnorm(residuals(model2))
  110. # ! list of models, run and saved:
  111. # model2_N1_1
  112. # model2_N1_2
  113. # model2_N1_3
  114. # model2_P2_1
  115. # model2_P2_2
  116. # model2_EPN_1
  117. # ==========================================================================
  118. # CONRASTS AND INTERACTIONS
  119. emm_options(pbkrtest.limit = 7659) # observations = 7659
  120. # If lags, limit = 5964
  121. # emm_options(pbkrtest.limit = 5964)
  122. # N1_1. valence (high, neutral) × mood (positive, control)
  123. (N1_1_emmp_means <- emmeans(model2_N1_1, ~ mood | valence, adjust = "holm")) # means
  124. (N1_1_emmp_contrasts <- contrast(N1_1_emmp_means, "pairwise"))
  125. N1_1_emmp_means
  126. N1_1_emmp_contrasts
  127. # N1_2. valence (high, neutral) × mood (positive, control)
  128. (N1_2_emmp_means <- emmeans(model2_N1_2, ~ mood | valence, adjust = "holm")) # means
  129. (N1_2_emmp_contrasts <- contrast(N1_2_emmp_means, "pairwise"))
  130. N1_2_emmp_means
  131. N1_2_emmp_contrasts
  132. # N1_3. valence (high, low) × mood (positive, control)
  133. (N1_3_emmp_means <- emmeans(model2_N1_3, ~ mood | valence, adjust = "holm")) # means
  134. (N1_3_emmp_contrasts <- contrast(N1_3_emmp_means, "pairwise"))
  135. N1_3_emmp_means
  136. N1_3_emmp_contrasts
  137. # P2_1. valence (high, low) × mood (positive, control)
  138. (P2_1_emmp_means <- emmeans(model2_P2_1, ~ mood | valence, adjust = "holm")) # means
  139. (P2_1_emmp_contrasts <- contrast(P2_1_emmp_means, "pairwise"))
  140. P2_1_emmp_means
  141. P2_1_emmp_contrasts
  142. # interaction terms for ((HiVal-LoVal)Pos minus Ctrl):
  143. emm_options(pbkrtest.limit = 5964)
  144. (P2_1_emmp_means_new <- emmeans(model2_P2_1, ~ valence | mood, adjust = "holm")) # means
  145. val23_diffs <- contrast(P2_1_emmp_means_new, method = list("Val2 - Val3" = c(0, 1, -1)), # Valence2 - Valence3
  146. by = "mood")
  147. interaction_contrast <- contrast(val23_diffs, method = list("Mood2 vs Mood1 on (Val2-Val3)" = c(-1, 1, 0)), by = NULL)
  148. summary(interaction_contrast, infer = c(TRUE, TRUE))
  149. # P2_2
  150. (P2_2_emmp_means <- emmeans(model2_P2_2, ~ mood | valence, adjust = "holm")) # means
  151. (P2_2_emmp_contrasts <- contrast(P2_2_emmp_means, "pairwise"))
  152. P2_2_emmp_means
  153. P2_2_emmp_contrasts
  154. # interaction terms for ((HiVal-LoVal)Pos minus Ctrl):
  155. emm_options(pbkrtest.limit = 5964)
  156. (P2_2_emmp_means_new <- emmeans(model2_P2_2, ~ valence | mood, adjust = "holm")) # means
  157. val13_diffs <- contrast(P2_2_emmp_means_new, method = list("Val1 - Val3" = c(1, 0, -1)), # Valence1 - Valence3
  158. by = "mood")
  159. interaction_contrast <- contrast(val13_diffs, method = list("Mood2 vs Mood1 on (Val1-Val3)" = c(-1, 1, 0)), by = NULL)
  160. summary(interaction_contrast, infer = c(TRUE, TRUE))
  161. # EPN
  162. (EPN_1_emmp_means <- emmeans(model2_EPN_1, ~ mood | valence, adjust = "holm")) # means
  163. (EPN_1_emmp_contrasts <- contrast(EPN_1_emmp_means, "pairwise"))
  164. EPN_1_emmp_means
  165. EPN_1_emmp_contrasts
  166. # interaction terms for ((HiVal-NeuVal)Pos-Neg):
  167. (EPN_1_emmp_means_new <- emmeans(model2_EPN_1, ~ valence | mood, adjust = "holm"))
  168. val21_diffs <- contrast(EPN_1_emmp_means_new, method = list("Val2 - Val1" = c(-1, 1, 0)), # Valence2 - Valence1
  169. by = "mood")
  170. interaction_contrast <- contrast(val21_diffs, method = list("Mood2 vs Mood3 on (Val2-Val1)" = c(0, 1, -1)),
  171. by = NULL)
  172. summary(interaction_contrast, infer = c(TRUE, TRUE))
  173. # ==========================================================================
  174. # PLOT:
  175. # NB ! change data frame, ylim and labels for each clusters as necessary
  176. # N1_2 = right anterior
  177. # N1_1 = left parietal
  178. # N1_3 = central parietal
  179. # P2_1: smaller
  180. # P2_2: larger
  181. plot <- as.data.frame(EPN_1_emmp_means) # change for other clusters accordingly
  182. ggplot(plot, aes(x = mood, y = emmean, color = valence, group = valence)) +
  183. geom_point(size = 2, position = position_dodge(0.2)) +
  184. geom_line(size = 1, position = position_dodge(0.2)) +
  185. geom_errorbar(aes(ymin = emmean-SE, ymax = emmean+SE), width = 0.1, position = position_dodge(0.2)) +
  186. scale_y_reverse() +
  187. scale_color_manual(values = c("#619CFF", "#F8766D", "#00BA38")) +
  188. # ylim(0, -1.2) + # change appr as follows for clusters:
  189. # for N1_1 and N1_2: ylim(0,-1.2);
  190. # for N1_3: ylim(1,-0.2);
  191. # for P2_1: ylim(1.25, 0.05) or as above;
  192. # for P2_2: ylim(1.75, 0.55);
  193. # for EPN: ylim(0, -1.2)
  194. labs(title = "EPN, Left Parietal", x = "Mood", y = "Amplitude (microV)", color = "Valence") +
  195. # change title as needed
  196. scale_x_discrete(labels = c("Control", "Positive", "Negative")) +
  197. theme_minimal(base_size = 14) +
  198. theme(text = element_text(size = 20), legend.position="top",
  199. axis.text.x = element_text(size=18), axis.title.x = element_text(size=18, face="bold"),
  200. axis.text.y = element_text(size=18), axis.title.y = element_text(size=18, face="bold"))
  201. # ==========================================================================
  202. # summary
  203. # N1_1
  204. summary(model2_N1_1)
  205. anova(model2_N1_1)
  206. performance::r2(model2_N1_1)
  207. N1_1_emmp_means
  208. N1_1_emmp_contrasts
  209. # N1_2
  210. summary(model2_N1_2)
  211. anova(model2_N1_2)
  212. performance::r2(model2_N1_2)
  213. N1_2_emmp_means
  214. N1_2_emmp_contrasts
  215. # N1_3
  216. summary(model2_N1_3)
  217. anova(model2_N1_3)
  218. performance::r2(model2_N1_3)
  219. N1_3_emmp_means
  220. N1_3_emmp_contrasts
  221. # P2_1
  222. summary(model2_P2_1)
  223. anova(model2_P2_1)
  224. performance::r2(model2_P2_1)
  225. P2_1_emmp_means
  226. P2_1_emmp_contrasts
  227. # P2_2
  228. summary(model2_P2_2)
  229. anova(model2_P2_2)
  230. performance::r2(model2_P2_2)
  231. P2_2_emmp_means
  232. P2_2_emmp_contrasts
  233. # EPN_1
  234. summary(model2_EPN_1)
  235. anova(model2_EPN_1)
  236. performance::r2(model2_EPN_1)
  237. EPN_1_emmp_means
  238. EPN_1_emmp_contrasts

ERP_LMM.R, no license · at the source

Overview

  1. Center for Languages and Literature, Lund University,PO Box 201, 22100 Lund, Sweden
Institutions: Lund University (Sweden)
Journal: Cognitive, affective & behavioral neuroscience, volume 26, issue 3, pages 1101-1122
Dates: received 20 May 2025; accepted 23 December 2025; published online 25 March 2026; in print 2026
Type: Research article · Language: English
License: CC BY
Identifiers: DOI 10.3758/s13415-025-01394-x · PMID 41882306 · PMCID PMC13260159 · OpenAlex W7140322260
Open access: hybrid, a free copy (OpenAlex)
Status: code verified (how the code is found and verified)
Categories: EEG (modality), human (organism), cognitive (subfield)
Methods: Spectral & time-frequency, Statistics, Smoothing, state filtering, decompositions, Preprocessing, Evoked potentials, Single-unit activity, calcium imaging
Keywords: Mood, Affective state, Emotional language processing, Event-related potential, Language, Semantics
MeSH: Affect*, Brain*, Emotions*, Evoked Potentials*, Adult, Electroencephalography, Female, Humans, Male, Reaction Time, Semantics, Young Adult (* major topic)
Topic: Neural and Behavioral Psychology Studies (Cognitive Neuroscience, Neuroscience), according to OpenAlex
Funding: Crafoordska Stiftelsen (2017.0006); Swedish Research Council (2018.00632); Knut och Alice Wallenbergs Stiftelse (2018.0454); Lund University
Citations: not cited yet (Europe PMC); 107 references in the paper

Abstract

Mood is a pervasive affective state that influences cognition, including language processing, where it functions as part of the pragmatic context. When linguistic expressions carry emotional valence, mood may amplify or attenuate their perceived emotional nature. Motivated by inconsistent findings on the timing and nature of mood and valence interactions, we conducted an EEG study to investigate whether induced moods alter the temporal profile of emotional word processing. Participants rated words of high, low, and neutral valence in a control condition and after positive and negative mood induction. Event-related potentials were analysed across three early processing windows using cluster-based permutation tests. Results showed that mood modulated early neural activity: in the positive mood, high-valence words reduced N1 amplitudes compared with control, reflecting diminished prediction error. In the subsequent P2 and EPN windows, reduced amplitudes for high- and neutral-valence words indicated a decreased need for model updating under mood-congruent expectations. By contrast, the negative mood exerted weaker and later effects. Behavioural responses corroborated these findings, with faster response times to valenced words. Within predictive coding frameworks, mood can be understood as a hyperprior that shapes precision weighting and error dynamics. Our results suggest that induced positive mood facilitates the processing of congruent words and broadens the range of input treated as predictable, whereas induced negative mood primarily reduces positive affect. These findings highlight the role of mood in dynamically tuning early language processing through the regulation of prediction error and model update.

Supplementary Information: The online version contains supplementary material available at 10.3758/s13415-025-01394-x.

Reproduced under the paper's license (CC BY), from the paper cited above.

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OSF j2enh

License: none: the authors keep all their rights
State: the link answers, verified on 30 September 2026
Evidence: files inventoried
Languages: R (4)
Size: 16 files, 4 scripts
Software Heritage: not checked
Found in: “Code availability”
Not found: README, license file, CITATION.cff, environment file, tests, continuous integration, documentation
Tools: ggplot2 (4 files), ggpubr (4 files), rstatix (4 files), tidyverse (4 files), afex (3 files), car (3 files), easystats (3 files), emmeans (3 files), psych (3 files)
Availability: 1 check, the latest on 30 September 2026: the link answers (HTTP 200)
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4 files
At the source: osf.io/j2enh/

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R scripts are available at https://osf.io/j2enh/.

Reproduced under the paper's license (CC BY), from the paper cited above.

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Recorded: type, language, journal, volume, issue, pages, dates, 3 authors, 6 keywords, 12 MeSH terms, 4 funders, 97 references.

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This paper

Kopaeva, E., Blomberg, J., & Roll, M. (2026). Mood modulations of emotional word processing: A predictive perspective view of EEG data. Cognitive, affective & behavioral neuroscience, 26(3), 1101-1122. https://doi.org/10.3758/s13415-025-01394-x

BibTeX

@article{kopaeva2026mood,
author = {Kopaeva, Ekaterina and Blomberg, Johan and Roll, Mikael},
title = {{Mood modulations of emotional word processing: A predictive perspective view of EEG data}},
journal = {Cognitive, affective \& behavioral neuroscience},
year = {2026},
month = mar,
volume = {26},
number = {3},
pages = {1101--1122},
publisher = {Springer Science+Business Media},
issn = {1530-7026},
doi = {10.3758/s13415-025-01394-x},
url = {https://doi.org/10.3758/s13415-025-01394-x},
pmid = {41882306},
pmcid = {PMC13260159}
}

RIS

TY - JOUR
AU - Kopaeva, Ekaterina
AU - Blomberg, Johan
AU - Roll, Mikael
TI - Mood modulations of emotional word processing: A predictive perspective view of EEG data
T2 - Cognitive, affective & behavioral neuroscience
J2 - Cogn Affect Behav Neurosci
PY - 2026
DA - 2026/03/25
VL - 26
IS - 3
SP - 1101
EP - 1122
SN - 1530-7026
PB - Springer Science+Business Media
DO - 10.3758/s13415-025-01394-x
UR - https://doi.org/10.3758/s13415-025-01394-x
LA - en
ER -

CSL-JSON

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"PMID": "41882306",
"PMCID": "PMC13260159",
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