Genome-wide association studies of brain diffusion kurtosis imaging phenotypes.
Paper
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The authors' code
Python · 12 lines · 316 B · BSD-2-Clause
- import gl
- gl.resetdefaults()
- gl.azimuthelevation(70, 15)
- gl.meshload('BrainMesh_ICBM152Right.mz3')
- gl.overlayload('motor_4t95vol.nii.gz')
- gl.overlayminmax(1,2,12)
- gl.overlayload('motor_4t95vol.nii.gz')
- gl.overlayminmax(2,-1,-2)
- gl.colorbarvisible(1)
- gl.overlaytransparencyonbackground(25)
- gl.meshcurv()
basic_paint_surface.py at commit 69f80b6, under BSD-2-Clause · at the source
Overview
and 26 other authors
Qiang Xu1, Jiayuan Xu1, Peng Zhang21, Wei Li21, Dapeng Shi3, Caihong Wang22, Su Lui23,24, Zhihan Yan25, Feng Chen26, Jing Zhang27,28, Jiance Li29, Wen Shen30, Yanwei Miao31, Dawei Wang32, Junfang Xian33, Jia-Hong Gao34, Xiaochu Zhang35, Kai Xu36, Xi-Nian Zuo37,38, Longjiang Zhang39, Zhaoxiang Ye21, Jingliang Cheng22, Wen Qin1, Hui Zhang40, Chunshui Yu1,41, The CHIMGEN Consortium41 affiliations
- Department of Radiology, Tianjin Key Laboratory of Functional Imaging, and State Key Laboratory of Experimental Hematology, Tianjin Medical University General Hospital, 300052, Tianjin, China
- Department of Bioinformatics, The Province and Ministry Co-sponsored Collaborative Innovation Center for Medical Epigenetics, School of Basic Medical Sciences, Tianjin Medical University, 300070, Tianjin, China
- Department of Radiology, Henan Provincial People's Hospital & Zhengzhou University People's Hospital, 450003, Zhengzhou, China
- Biomedical Institute, Henan Academy of Sciences, 450199, Zhengzhou, China
- Department of Radiology, Drum Tower Hospital, Medical School of Nanjing University, 210008, Nanjing, China
- Department of Radiology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, 430030, Wuhan, China
- Department of Medical Imaging, The First Affiliated Hospital of Guangzhou University of Traditional Chinese Medicine, 510405, Guangzhou, China
- Department of Medical Imaging, The Second Hospital of Hebei Medical University, 050000, Shijiazhuang, China
- Functional and Molecular Imaging Key Lab of Shaanxi Province & Department of Radiology, Tangdu Hospital, Air Force Medical University, 710038, Xi'an, China
- Department of Radiology, Characteristic Medical Center of Chinese People's Armed Police Force, 300162, Tianjin, China
- Department of Radiology, The First Affiliated Hospital of Anhui Medical University, 230022, Hefei, China
- Department of Radiology, Xiangya Hospital, Central South University, 410008, Changsha, China
- Molecular Imaging Research Center of Central South University, 410008, Changsha, China
- National Clinical Research Center for Geriatric Disorders, Xiangya Hospital, Central South University, 410008 Changsha, China
- Department of Radiology, The Affiliated Hospital of Guizhou Medical University, 550004 Guiyang, China
- Department of Radiology, Yantai Yuhuangding Hospital, 264000, Yantai, China
- Department of Radiology, The Second Affiliated Hospital of Zhejiang University, School of Medicine, 310009 Hangzhou, China
- Department of Radiology, Tianjin Huanhu Hospital, 300350, Tianjin, China
- Department of Radiology, Huashan Hospital, Fudan University, 200040, Shanghai, China
- School of Medical Imaging and Tianjin Key Laboratory of Functional Imaging, Tianjin Medical University, 300203, Tianjin, China
- Department of Radiology, Tianjin Medical University Cancer Institute & Hospital, National Clinical Research Center for Cancer, Tianjin's Clinical Research Center for Cancer, Tianjin Medical University, Ministry of Education, Key Laboratory of Cancer Prevention and Therapy, Tianjin, 300060, China
- Department of Magnetic Resonance Imaging, The First Affiliated Hospital of Zhengzhou University, 450052, Zhengzhou, China
- Department of Radiology, Huaxi MR Research Center (HMRRC), Functional and Molecular Imaging key Laboratory of Sichuan Province, West China Hospital of Sichuan University, 610041, Chengdu, China
- Research Unit of Psychoradiology, Chinese Academy of Medical Sciences, 610041 Chengdu, China
- Department of Radiology, The Second Affiliated Hospital and Yuying Children's Hospital of Wenzhou Medical University, 325027, Wenzhou, China
- Department of Radiology, Hainan General Hospital (Hainan Affiliated Hospital of Hainan Medical University), 570311, Haikou, China
- Department of Magnetic Resonance, Lanzhou University Second Hospital, 730030, Lanzhou, China
- Gansu Province Clinical Research Center for Functional and Molecular Imaging, 730030, Lanzhou, China
- Department of Radiology, The First Affiliated Hospital of Wenzhou Medical University, 325000, Wenzhou, China
- Department of Radiology, Tianjin First Center Hospital, 300192, Tianjin, China
- Department of Radiology, The First Affiliated Hospital of Dalian Medical University, 116011, Dalian, China
- Department of Radiology, Qilu Hospital of Shandong University, 250012, Jinan, China
- Department of Radiology, Beijing Tongren Hospital, Capital Medical University, 100730, Beijing, China
- Center for MRI Research, Academy for Advanced Interdisciplinary Studies, Peking University, 100871, Beijing, China
- Division of Life Science and Medicine, University of Science & Technology of China, 230027, Hefei, China
- Department of Radiology, The Affiliated Hospital of Xuzhou Medical University, 221006, Xuzhou, China
- Developmental Population Neuroscience Research Center at IDG/McGovern Institute for Brain Research, Beijing Normal University, 100875, Beijing, China
- Institute of Psychology, Chinese Academy of Sciences, 100101, Beijing, China
- Department of Radiology, Jinling Hospital, Affiliated Hospital of Medical School, Nanjing University, 210002, Nanjing, China
- Department of Radiology, The First Hospital of Shanxi Medical University, 030001, Taiyuan, China
- CAS Center for Excellence in Brain Science and Intelligence Technology, Chinese Academy of Sciences, 200031, Shanghai, China
Abstract
The abstract is not reproduced here: the paper's license (CC BY-NC-ND) does not allow it. Read it in the paper, at the publisher or on Europe PMC.
Repositories
Its files are read in the Code ↔ Paper reader above.
neurolabusc/surf-ice
69f80b6e676ce56d1d99825c3579e59fc1e7e419, 27 April 2026Availability: 1 check, the latest on 29 September 2026: the link answers
- 29 September 2026: the link answers
45 files
- Resources/
script/ , Python, 12 linesbasic_paint_surface.py - Resources/
script/ , Python, 8 linesfmri_mesh.py - Resources/
script/ , Python, 10 lineshelp.py - Resources/
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script/ , Python, 11 linesmatcapMesh.py - Resources/
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script/ , Python, 18 linesnewer_2017.py - Resources/
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script/ , Python, 10 linestrack.py - Resources/
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blender-mz3-addon/ , Python, 376 linesimport_mz3.py - mz3/
demo_mz3 copy.m , MATLAB, 139 lines - mz3/
demo_mz3.m , MATLAB, 57 lines - mz3/
mz3.py , Python, 129 lines - mz3/
readMz3.m , MATLAB, 133 lines - mz3/
spmTest.m , MATLAB, 36 lines - mz3/
threejs/ , JavaScript, 190 linesMZ3Loader.js - mz3/
writeMz3.m , MATLAB, 173 lines - surfice.app/
Contents/ , Python, 12 linesResources/ script/ basic_paint_surface.py - surfice.app/
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Contents/ , Python, 4 linesResources/ script/ zwatertight.py - LICENSE, License, 25 lines
- README.md, Text, 72 lines
precision-medicine-um/ComBatHarmonization
fe0ff46fe722e79d044af02067d7aa517856ab23, 26 June 2018Availability: 1 check, the latest on 29 September 2026: the link answers
- 29 September 2026: the link answers
16 files
- Matlab/
scripts/ , MATLAB, 5 linesaprior.m - Matlab/
scripts/ , MATLAB, 5 linesbprior.m - Matlab/
scripts/ , MATLAB, 106 linescombat.m - Matlab/
scripts/ , MATLAB, 18 linesitSol.m - Matlab/
scripts/ , MATLAB, 3 linespostmean.m - Matlab/
scripts/ , MATLAB, 3 linespostvar.m - R/
scripts/ , R, 131 linescombat.R - R/
scripts/ , R, 130 linescombat_matching.R - R/
scripts/ , R, 33 linesplot.R - R/
scripts/ , R, 94 linesutils.R - Testing/
compare.R , R, 5 lines - Testing/
createTestData.R , R, 8 lines - Testing/
norm_matlab.m , MATLAB, 13 lines - Testing/
norm_r.R , R, 17 lines - LICENSE.txt, License, 201 lines
- README.md, Text, 66 lines
The paper's code and data availability statement is in the Data section.
Tracing map
Proposed by the machine: these links were found in the paper and verified at the source, without human review. The map will receive a Zenodo DOI once one of the paper's authors has validated it with their ORCID.
What the map holds:
- 2 repositories of the authors' code, each at its verified commit, with its license and how the link was found in the paper;
- 57 scripts, each with its path and the digest of its content;
- no match between paragraphs and code yet;
- neither the text of the paper nor the code itself.
Its JSON (tracing-map.json) is deposited on Zenodo with its DOI once the map is validated.
Data
No dataset and no data link were found in the paper.
Code and data availability statement
The paper has a code and data availability statement. Its license (CC BY-NC-ND) does not allow reproducing it here; in short, from what the harvester recognized in it:
- it points to the authors' code: precision-medicine-um/
ComBatHarmonization
Read it in the paper: doi.org/10.1016/j.ebiom.2026.106261.
Versions
The history of this record: each version stored by the harvester or made by a correction of its authors or of the maintainers of its code, and what changed in its facts. The texts of the paper (its abstract, its availability statements) are not part of it; versions that changed only those are not listed.
Version 1, 29 September 2026: the first record
Recorded: type, language, journal, volume, pages, dates, 46 authors, 5 keywords, 11 MeSH terms, 4 funders, 44 references.
Cite
This paper
Fu, J., Wang, J., Xue, H., Wang, M., Zhang, B., Zhu, W., Qiu, S., Geng, Z., Cui, G., Zhang, Q., Yu, Y., Liao, W., Gao, B., Xu, X., Han, T., Yao, Z., Li, M. J., Liu, F., Liang, M., . . . The CHIMGEN Consortium. (2026). Genome-wide association studies of brain diffusion kurtosis imaging phenotypes. EBioMedicine, 127, 106261. https://
BibTeX
@article{fu2026genome,
author = {Fu, Jilian and Wang, Jianhua and Xue, Hui and Wang, Meiyun and Zhang, Bing and Zhu, Wenzhen and Qiu, Shijun and Geng, Zuojun and Cui, Guangbin and Zhang, Quan and Yu, Yongqiang and Liao, Weihua and Gao, Bo and Xu, Xiaojun and Han, Tong and Yao, Zhenwei and Li, Mulin Jun and Liu, Feng and Liang, Meng and Wang, Sijia and Xu, Qiang and Xu, Jiayuan and Zhang, Peng and Li, Wei and Shi, Dapeng and Wang, Caihong and Lui, Su and Yan, Zhihan and Chen, Feng and Zhang, Jing and Li, Jiance and Shen, Wen and Miao, Yanwei and Wang, Dawei and Xian, Junfang and Gao, Jia-Hong and Zhang, Xiaochu and Xu, Kai and Zuo, Xi-Nian and Zhang, Longjiang and Ye, Zhaoxiang and Cheng, Jingliang and Qin, Wen and Zhang, Hui and Yu, Chunshui and {The CHIMGEN Consortium}},
title = {{Genome-wide association studies of brain diffusion kurtosis imaging phenotypes}},
journal = {EBioMedicine},
year = {2026},
month = apr,
volume = {127},
pages = {106261},
publisher = {Elsevier},
issn = {2352-3964},
doi = {10.1016/
url = {https://
pmid = {42000319},
pmcid = {PMC13099350}
}
RIS
TY - JOUR
AU - Fu, Jilian
AU - Wang, Jianhua
AU - Xue, Hui
AU - Wang, Meiyun
AU - Zhang, Bing
AU - Zhu, Wenzhen
AU - Qiu, Shijun
AU - Geng, Zuojun
AU - Cui, Guangbin
AU - Zhang, Quan
AU - Yu, Yongqiang
AU - Liao, Weihua
AU - Gao, Bo
AU - Xu, Xiaojun
AU - Han, Tong
AU - Yao, Zhenwei
AU - Li, Mulin Jun
AU - Liu, Feng
AU - Liang, Meng
AU - Wang, Sijia
AU - Xu, Qiang
AU - Xu, Jiayuan
AU - Zhang, Peng
AU - Li, Wei
AU - Shi, Dapeng
AU - Wang, Caihong
AU - Lui, Su
AU - Yan, Zhihan
AU - Chen, Feng
AU - Zhang, Jing
AU - Li, Jiance
AU - Shen, Wen
AU - Miao, Yanwei
AU - Wang, Dawei
AU - Xian, Junfang
AU - Gao, Jia-Hong
AU - Zhang, Xiaochu
AU - Xu, Kai
AU - Zuo, Xi-Nian
AU - Zhang, Longjiang
AU - Ye, Zhaoxiang
AU - Cheng, Jingliang
AU - Qin, Wen
AU - Zhang, Hui
AU - Yu, Chunshui
AU - The CHIMGEN Consortium
TI - Genome-wide association studies of brain diffusion kurtosis imaging phenotypes
T2 - EBioMedicine
J2 - eBioMedicine
PY - 2026
DA - 2026/
VL - 127
SP - 106261
SN - 2352-3964
PB - Elsevier
DO - 10.1016/
UR - https://
LA - en
ER -
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