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Octopamine regulates neural circuits in the mushroom body and central complex, influencing sleep and arousal.

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Paper

Loaded from Europe PMC by your browser, not stored by OSCR: doi.org · Europe PMC

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The authors' code

MATLAB · 4 lines · 147 B · CC-BY-4.0

  1. function runFlyShakerGUI
  2. % runFlyShakerGUI Launch FlyShaker GUI (wrapper).
  3. FlyShakerGUI_App(); % object persists via figure callbacks
  4. end

FlyShakerGUI.m, under CC-BY-4.0 · at the source

Overview

Authors: Martin Reyes1, Yi Shen Lee1, Maria Muhammad Ali1, Preeti Sundaramurthi1, Namrata Dhungana1, Amanda Nguyen1, Thomas Zimmerman2,3, Sara Capponi2,3, Divya Sitaraman1
ORCID iDs: Divya Sitaraman
  1. Department of Psychology, College of Science, California State University- East Bay, Hayward, CA, USA
  2. IBM Almaden Research Center, San Jose, CA 95120, USA
  3. Center for Cellular Construction, San Francisco, CA 94158, USA
Institutions: California State University, East Bay (United States); University of California, San Francisco (United States); IBM Research - Almaden (United States)
Journal: iScience, volume 29, issue 5, article 115564
Dates: received 2 July 2025; accepted 30 March 2026; published online 2 April 2026
Type: Research article · Language: English
License: CC BY
Identifiers: DOI 10.1016/j.isci.2026.115564 · PMID 42058909 · PMCID PMC13122709 · OpenAlex W7148421048
Open access: gold, a free copy (OpenAlex)
Status: code verified
Categories: systems (subfield)
Methods: Statistics, Evoked potentials, fMRI & imaging, Single-unit activity, calcium imaging
Keywords: neuroscience, sensory neuroscience
Topic: Fungal Biology and Applications (Pharmacology, Medicine), according to OpenAlex
Funding: National Science Foundation (IOS-2042873); National Institute of General Medical Sciences (3R15GM125073-03S1); National Institutes of Health; National Science Foundation Division of Integrative Organismal Systems (IOS-2042873)
Citations: cited by 5 papers (Europe PMC); 94 references in the paper
Research resources: RRID:AB_144696, Rabbit polyclonal anti-GFP RRID:AB_221569, Mouse anti-nc82 RRID:AB_2314866, RRID:AB_2576217

Abstract

Sleep is a widespread yet incompletely understood phenomenon, and animals exhibit diverse arousal states beyond the simple binary of sleep and wake. Essential behaviors such as feeding, courtship, and escape often compete with sleep, and biogenic amines—including dopamine, norepinephrine, and serotonin—help regulate these behavioral states across species. Here, we leverage the small number and well-defined connectivity of neuromodulatory neurons in Drosophila to investigate how specific octopamine (OA) neurons regulate sleep and arousal. We focus on a pair of OA neurons, VPM3, which project broadly to the mushroom body (MB) and central complex (CX). We find that VPM3 neurons are sexually monomorphic, required for sleep suppression and male courtship, and modulated by sleep history. In addition, the male-specific fruitless isoform in these neurons is necessary for sleep regulation. Combining connectomics with targeted genetic manipulations, we identify key inputs from the CX, MB-mediated downstream pathways, and OA receptor signaling that together reveal how OA circuits coordinate sleep and arousal states.

Reproduced under the paper's license (CC BY), from the paper cited above.

Repositories

Its files are read in the Code ↔ Paper reader above.

Zenodo 18471737

License: CC-BY-4.0
State: the link answers, verified on 28 September 2026
Evidence: files inventoried
Languages: MATLAB (3)
Size: 3 files, 3 scripts
Software Heritage: not checked
Found in: “Data and code availability”
Not found: README, license file, CITATION.cff, environment file, tests, continuous integration, documentation
Availability: 1 check, the latest on 28 September 2026: the link answers (HTTP 200)
  • 28 September 2026: the link answers (HTTP 200)
3 files

cgoina/pysolo-tools

License: GPL-3.0
State: the link answers, verified on 28 September 2026
Evidence: files inventoried
Commit: aac8f9a3ef3d5fc68aaed4bd98cfda23511165a0, 20 March 2024
Languages: Python (9)
Size: 18 files, 9 scripts
Software Heritage: archived
Found in: the text, “Mechanical stimulation setup”
Holds: README, license file, environment (conda-env.yml)
Not found: CITATION.cff, tests, continuous integration, documentation
Tools: OpenCV (4 files), NumPy (3 files)
Availability: 1 check, the latest on 28 September 2026: the link answers
  • 28 September 2026: the link answers
11 files

The paper's code and data availability statement is in the Data section.

Tracing map

Proposed by the machine: these links were found in the paper and verified at the source, without human review. The map will receive a Zenodo DOI once one of the paper's authors has validated it with their ORCID.

What the map holds:

  • 2 repositories of the authors' code, each at its verified commit, with its license and how the link was found in the paper;
  • 12 scripts, each with its path and the digest of its content;
  • no match between paragraphs and code yet;
  • neither the text of the paper nor the code itself.

Its JSON (tracing-map.json) is deposited on Zenodo with its DOI once the map is validated.

Data

Datasets cited

Data and code availability

All data reported in this article are available from the lead contact upon request. This study did not generate new code. MATLAB scripts used for behavioral analyses and visualizing data are available from the lead contact upon request. MATLAB code used for delivering sine pulses is available here: https://doi.org/10.5281/zenodo.18471737. Any additional information required to reanalyze the data reported in this article is available from the lead contact upon request.

Reproduced under the paper's license (CC BY), from the paper cited above.

Versions

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Version 1, 28 September 2026: the first record

Recorded: type, language, journal, volume, issue, pages, dates, 9 authors, 2 keywords, 4 funders, 93 references, 4 RRIDs.

Cite

This paper

Reyes, M., Lee, Y. S., Ali, M. M., Sundaramurthi, P., Dhungana, N., Nguyen, A., Zimmerman, T., Capponi, S., & Sitaraman, D. (2026). Octopamine regulates neural circuits in the mushroom body and central complex, influencing sleep and arousal. iScience, 29(5), 115564. https://doi.org/10.1016/j.isci.2026.115564

BibTeX

@article{reyes2026octopamine,
author = {Reyes, Martin and Lee, Yi Shen and Ali, Maria Muhammad and Sundaramurthi, Preeti and Dhungana, Namrata and Nguyen, Amanda and Zimmerman, Thomas and Capponi, Sara and Sitaraman, Divya},
title = {{Octopamine regulates neural circuits in the mushroom body and central complex, influencing sleep and arousal}},
journal = {iScience},
year = {2026},
month = apr,
volume = {29},
number = {5},
pages = {115564},
publisher = {Elsevier},
issn = {2589-0042},
doi = {10.1016/j.isci.2026.115564},
url = {https://doi.org/10.1016/j.isci.2026.115564},
pmid = {42058909},
pmcid = {PMC13122709}
}

RIS

TY - JOUR
AU - Reyes, Martin
AU - Lee, Yi Shen
AU - Ali, Maria Muhammad
AU - Sundaramurthi, Preeti
AU - Dhungana, Namrata
AU - Nguyen, Amanda
AU - Zimmerman, Thomas
AU - Capponi, Sara
AU - Sitaraman, Divya
TI - Octopamine regulates neural circuits in the mushroom body and central complex, influencing sleep and arousal
T2 - iScience
J2 - iScience
PY - 2026
DA - 2026/04/02
VL - 29
IS - 5
SP - 115564
SN - 2589-0042
PB - Elsevier
DO - 10.1016/j.isci.2026.115564
UR - https://doi.org/10.1016/j.isci.2026.115564
LA - en
ER -

CSL-JSON

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