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Behavioral algorithms of ontogenetic switching in larval and juvenile zebrafish phototaxis.

Overview

Authors: Maxim Q Capelle1,2,3,4, Katja Slangewal1,2,4, Panagiotis E Eleftheriadis1,2,4, Armin Bahl1,2,3,4
ORCID iDs: Armin Bahl
  1. Department of Biology, University of Konstanz, Konstanz 78464, Germany
  2. Centre for the Advanced Study of Collective Behaviour, University of Konstanz, Konstanz 78464, Germany
  3. Zukunftskolleg, University of Konstanz, Konstanz 78464, Germany
  4. International Max Planck Research School for Quantitative Behaviour, Ecology and Evolution (IMPRS/QBEE), Max Planck Institute of Animal Behavior, Radolfzell 78315, Germany
Journal: iScience, volume 29, issue 6, article 116190
Dates: received 11 July 2025; accepted 14 May 2026; published online 5 June 2026
Type: Research article · Language: English
License: CC BY
Identifiers: DOI 10.1016/j.isci.2026.116190 · PMID 42291246 · PMCID PMC13253138 · OpenAlex W4411363495
Open access: gold, a free copy (OpenAlex)
Status: code on request
Categories: zebrafish (organism), developmental (subfield)
Methods: Connectivity, Statistics
Keywords: Biological sciences, Behavioral neuroscience, Systems neuroscience, Developmental biology
Topic: Zebrafish Biomedical Research Applications (Cell Biology, Biochemistry, Genetics and Molecular Biology), according to OpenAlex
Funding: Max-Planck-Gesellschaft; DFG (BA 5923/1-1, EXC 2117\u2013422037984); Zukunftskolleg, Universität Konstanz; European Research Council (101075541); Boehringer Ingelheim Fonds Foundation for Basic Research in Medicine
Citations: cited by 1 paper (Europe PMC); 57 references in the paper
Research resources: Python 3.12 RRID:SCR_008394, Panda3D RRID:SCR_021216

Abstract

Animals undergo major behavioral adjustments during ontogeny, but how the underlying cognitive algorithms change during this process remains elusive. Here, we describe that zebrafish shift from light-seeking to dark-seeking as they grow from larval to juvenile stage. Combining complementary phototaxis assays in virtual reality and modeling, we dissect the computational basis of this transition. We identify three parallel pathways, one analyzing ambient whole-field luminance levels, one spatially comparing light levels across the eyes, and one computing luminance change in each eye. Larvae mostly use the latter two computations, whereas juveniles largely employ the first one. Using a library of agent-based models, we predict behavior in more complex environments. Model-based extraction of latent cognitive variables suggests potential neural correlates of this behavioral inversion. We suggest that zebrafish phototaxis is regulated via parallel processing streams, which could be a universal mechanism for adjusting behavior depending on developmental stage, context, or internal state.

Reproduced under the paper's license (CC BY), from the paper cited above.

Code

The paper says that its authors' code is available on request: it was not published with the paper, so there is nothing to verify.

The paper's code and data availability statement is in the Data section.

Tracing map

A tracing map links a paper to the code its authors published: this paper has none (its code is available on request), so it has no map.

Data

No dataset and no data link were found in the paper.

Data and code availability

All data associated with this manuscript are publicly available on the persistent repository platform KonDATA with the identifier https://doi.org/10.48606/sb32fkvwj5avwhbr.

The code for simulations and data analysis is available on the persistent repository platform KonDATA with the identifier https://doi.org/10.48606/m9v18p3c6cb7k77q.

Any additional information required to reanalyze the data reported in this study is available from the lead contact upon request.

Reproduced under the paper's license (CC BY), from the paper cited above.

Versions

The history of this record: each version stored by the harvester or made by a correction of its authors or of the maintainers of its code, and what changed in its facts. The texts of the paper (its abstract, its availability statements) are not part of it; versions that changed only those are not listed.

Version 2, 28 September 2026

  • Authors: added Armin Bahl (0000-0001-7591-5860); removed Armin Bahl

Version 1, 27 September 2026: the first record

Recorded: type, language, journal, volume, issue, pages, dates, 4 authors, 4 keywords, 5 funders, 55 references, 2 RRIDs.

Cite

This paper

Capelle, M. Q., Slangewal, K., Eleftheriadis, P. E., & Bahl, A. (2026). Behavioral algorithms of ontogenetic switching in larval and juvenile zebrafish phototaxis. iScience, 29(6), 116190. https://doi.org/10.1016/j.isci.2026.116190

BibTeX

@article{capelle2026behavioral,
author = {Capelle, Maxim Q and Slangewal, Katja and Eleftheriadis, Panagiotis E and Bahl, Armin},
title = {{Behavioral algorithms of ontogenetic switching in larval and juvenile zebrafish phototaxis}},
journal = {iScience},
year = {2026},
month = jun,
volume = {29},
number = {6},
pages = {116190},
publisher = {Elsevier},
issn = {2589-0042},
doi = {10.1016/j.isci.2026.116190},
url = {https://doi.org/10.1016/j.isci.2026.116190},
pmid = {42291246},
pmcid = {PMC13253138}
}

RIS

TY - JOUR
AU - Capelle, Maxim Q
AU - Slangewal, Katja
AU - Eleftheriadis, Panagiotis E
AU - Bahl, Armin
TI - Behavioral algorithms of ontogenetic switching in larval and juvenile zebrafish phototaxis
T2 - iScience
J2 - iScience
PY - 2026
DA - 2026/06/05
VL - 29
IS - 6
SP - 116190
SN - 2589-0042
PB - Elsevier
DO - 10.1016/j.isci.2026.116190
UR - https://doi.org/10.1016/j.isci.2026.116190
LA - en
ER -

CSL-JSON

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