OSCR

developmental

Subfield: 2,060 papers with a page, 1,171 of them with their authors' code.

Tuesday, 10 November 2026 (1 paper)

[1] doi:10.1007/s10585-026-10449-3 [paper]
Mapping intratumoral coverage of neural stem cell-delivered anti-HER2 antibody in breast cancer brain metastasis.
Journal: Clinical & experimental metastasis
Status: code on request

Wednesday, 28 October 2026 (1 paper)

[2] Code ↔ Paper doi:10.1371/journal.pdig.0001127 [paper, repository]
Longitudinal patterns of digital parenting restrictions and adolescent screen use: Insights from the Adolescent Brain Cognitive Development (ABCD) study.
Journal: PLOS digital health
Authors' code: Daniel-Adan-Lopez/ABCD_ParentProfiles (no license)
Status: empty repository

Monday, 26 October 2026 (1 paper)

[3] Code ↔ Paper doi: [paper, repository]
Maternal microbiota shapes brain and neuroendocrine development in piglets
Journal: iMeta
Status: code verified, 17 files readable, 12 matches

Friday, 9 October 2026 (1 paper)

[4] Code ↔ Paper doi: [paper, repository]
Human iPSC-derived 2D cortical neurons and 3D cortical organoids show fetal brain proteomic similarity and distinct phosphoproteomic profiles
Journal: Frontiers in bioengineering and biotechnology
Status: code verified, 94 files readable, 24 matches

Tuesday, 29 September 2026 (1 paper)

[5] doi: [paper, data]
Tutorial on using EEG microstates to study moment-to-moment large-scale functional brain network dynamics in neurodevelopment
Journal: Frontiers in neuroscience
Status: data only, 1 dataset cited

Friday, 25 September 2026 (1 paper)

[6] doi:10.1039/d6tb01306f [paper, data]
Hyaluronic acid-alginate hydrazone crosslinked hydrogels support the generation and maturation of V2a interneurons.
Journal: Journal of materials chemistry. B
Status: data only, 1 dataset cited

Monday, 14 September 2026 (1 paper)

[7] doi:10.1038/s42003-026-10802-y [paper]
Transcriptome of fetal cortex of tree shrew underlying the emergence of outer subventricular zone.
Journal: Communications biology
Status: code on request

Saturday, 12 September 2026 (1 paper)

[8] doi:10.1016/j.isci.2026.117510 [paper, data]
Single-cell transcriptomic atlas of the human fetal uveal tract reveals heterogeneity in melanocyte populations.
Journal: iScience
Status: code on request, 1 dataset cited

Friday, 11 September 2026 (1 paper)

[9] Code ↔ Paper doi:10.1371/journal.pone.0358044 [paper, repository]
An exploratory fNIRS study on directional asymmetry in segmental discrimination: Lateral-rhotic (/la-ra/) and labial-dorsal (/ba-ga/) contrasts tested in 5- and 9-month-old Japanese infants.
Journal: PloS one
Authors' code: OSF xh6pm (no license)
Status: code verified, 5 files readable, 4 matches

Thursday, 10 September 2026 (1 paper)

[10] Code ↔ Paper doi:10.1016/j.bbih.2026.101351 [paper, repository]
Associations between chronic placental inflammation, fetal brain development and later autism traits.
Journal: Brain, behavior, & immunity - health
Authors' code: Zenodo 14051966 (CC-BY-4.0), wheelocklab/networklevelanalysis (MIT)
Status: code verified, 197 files readable, 1 match

Wednesday, 9 September 2026 (1 paper)

[11] Code ↔ Paper doi:10.1371/journal.pbio.3003927 [paper, repository]
Brain structural and functional connectivity converge prenatally but diverge after birth.
Journal: PLoS biology
Authors' code: Zenodo 21316924 (CC-BY-4.0), brainlife/BCT (MIT)
Status: code verified, 140 files readable, 4 matches

Tuesday, 8 September 2026 (2 papers)

[12] doi:10.1016/j.isci.2026.117467 [paper, data]
Larval taste exposure creates compound-specific behavioral modifications in adult <i>Drosophila melanogaster</i>.
Journal: iScience
Status: code on request, 1 dataset cited
[13] Code ↔ Paper doi:10.1093/braincomms/fcag318 [paper, repository]
Antenatal maternal anaemia and infant brain structure: high-field (3 T) and ultra-low-field (64 mT) MRI findings from South Africa.
Journal: Brain communications
Status: code verified, 15 files readable, 9 matches

Thursday, 3 September 2026 (1 paper)

[14] doi:10.1002/advs.77547 [paper, data]
Nrsn1-Smarcc1 Coupling Regulates Neural Stem Cell Differentiation and Chronic-phase Recovery After Ischemic Stroke.
Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)
Status: data only, 1 dataset cited

Tuesday, 1 September 2026 (8 papers)

[15] Code ↔ Paper doi:10.1016/j.jmro.2026.100225 [paper, repository]
Feasibility, image quality, and analytic usability of mobile 64 mT ultra-low-field MRI for infant brain imaging at 3 and 12 months in southern Malawi.
Journal: Journal of magnetic resonance open
Authors' code: UNITY-Physics (no license)
Status: code verified
[16] doi:10.1111/adb.70188 [paper]
Classification of Adolescent Drinking via Behavioral, Biological and Environmental Variables: A Machine Learning Approach With Bias Control.
Journal: Addiction biology
Status: code on request
[17] Code ↔ Paper doi:10.1093/cercor/bhag121 [paper, repository]
Preserved intrinsic neural timescale organization with hierarchical variation in autism spectrum disorder.
Journal: Cerebral cortex (New York, N.Y. : 1991)
Authors' code: shikauchiy/int-hierarchy-analysis (no license)
Status: code verified, 4 files readable, 5 matches
[18] Code ↔ Paper doi:10.1016/j.nicl.2026.104053 [paper, repository]
Childhood white matter organization predicts adolescent internalizing problems among youth with and without ADHD.
Journal: NeuroImage. Clinical
Authors' code: chydeDeakin/Hyde_et_al_2026 (no license)
Status: code verified, 1 file readable
[19] Code ↔ Paper doi:10.1016/j.dcn.2026.101806 [paper, repository]
Same ages, different stages: Pubertal development in 9- and 10-year olds is associated with entropy of fMRI signals.
Journal: Developmental cognitive neuroscience
Authors' code: DCAN-Labs/abcd-hcp-pipeline (BSD-3-Clause)
Status: code verified, 8 files readable, 2 matches
[20] Code ↔ Paper doi:10.1093/cercor/bhag132 [paper, repository]
Spatiotemporal white-matter development across early childhood.
Journal: Cerebral cortex (New York, N.Y. : 1991)
Authors' code: MervSingh/alongtract_fba_wm_dev (no license)
Status: code verified, 67 files readable, 6 matches
[21] doi:10.1111/desc.70272 [paper, data]
Distinct Neural Signatures of Novel Word-Referent Mapping in Monolingual and Bilingual Toddlers.
Journal: Developmental science
Status: data only, 1 dataset cited
[22] doi:10.1111/desc.70269 [paper, data]
Can You Feel My Pain? Neural-Behavioural Changes in Caregiver-Infant Dyads During Ostracism.
Journal: Developmental science
Status: data only, 1 dataset cited

Monday, 31 August 2026 (1 paper)

[23] Code ↔ Paper doi:10.1073/pnas.2602218123 [paper, repository]
Pregnancy diet based on ancestral patterns increases growth in subcortical fetal brain regions.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: OSF qwap8 (no license)
Status: code verified, 1 file readable

Wednesday, 26 August 2026 (2 papers)

[24] doi:10.1016/j.isci.2026.117332 [paper, data]
The <i>Sox2</i> regulatory region 42 produces enhancer RNAs that influence neuronal migration during cortical development.
Journal: iScience
Status: code on request, 1 dataset cited
[25] Code ↔ Paper doi:10.3389/fped.2026.1912111 [paper, repository]
Serial amplitude-integrated electroencephalography trajectories and brain-injury-associated functional immaturity in extremely preterm infants.
Journal: Frontiers in pediatrics
Authors' code: MdXuDeKai/AEEG (MIT)
Status: empty repository, 1 file readable

Tuesday, 25 August 2026 (1 paper)

[26] Code ↔ Paper doi:10.2196/84707 [paper, repository]
Wireless Electroencephalography in Research on Children With Developmental Disabilities: Scoping Review.
Journal: Journal of medical Internet research
Authors' code: Zenodo 21633946 (CC-BY-4.0)
Status: code verified

Friday, 21 August 2026 (2 papers)

[27] Code ↔ Paper doi:10.1038/s41540-026-00813-0 [paper, repository]
Combining in vitro and in silico approaches to model neural tube patterning and isthmic organizer formation.
Journal: NPJ systems biology and applications
Status: dead link
[28] doi:10.1038/s41467-026-76976-5 [paper, data]
Acoustic cell patterning reveals geometry- and substrate-dependent vasculogenesis and human embryo model development.
Journal: Nature communications
Status: data only, 1 dataset cited

Thursday, 20 August 2026 (1 paper)

[29] doi:10.1371/journal.pone.0356601 [paper, data]
Altered brain function associated with non-suicidal self-injury in adolescents with major depressive disorder: An rs-fMRI study.
Journal: PloS one
Status: data only, 1 dataset cited

Wednesday, 19 August 2026 (3 papers)

[30] Code ↔ Paper doi:10.21203/rs.3.rs-10456639/v1 [paper, repository]
Maturation of the neonatal cortical-depth-dependent BOLD response measured using ultra-high field fMRI
Journal: Research Square (preprint)
Status: code verified, 2 files readable
[31] Code ↔ Paper doi:10.1038/s41586-026-10877-x [paper, repository]
Human brain organoids record the passage of time over multiple years.
Journal: Nature
Status: code verified, 15 files readable, 21 matches
[32] Code ↔ Paper doi:10.1038/s41467-026-76675-1 [paper, repository]
Long-read proteogenomic atlas of human neuronal differentiation reveals isoform diversity informing neurodevelopmental risk mechanisms.
Journal: Nature communications
Authors' code: gandallab/Dev_Brain_IsoSeq (no license), nuoxuxu/SFARI (MIT), Zenodo 16897532 (CC-BY-4.0)
Status: code verified, 293 files readable, 40 matches

Saturday, 15 August 2026 (1 paper)

[33] Code ↔ Paper doi:10.1016/j.ynstr.2026.100847 [paper, repository]
Autonomic and limbic system functioning, early life stress, and depressive symptoms in adolescence.
Journal: Neurobiology of stress
Authors' code: eugiampetruzzi/autonomic-limbic (no license)
Status: code verified, 3 files readable, 4 matches

Wednesday, 12 August 2026 (3 papers)

[34] Code ↔ Paper doi:10.1126/sciadv.aec5080 [paper, repository]
Label-free biochemical imaging and time point analysis of neural organoids via deep learning-enhanced Raman microspectroscopy.
Journal: Science advances
Authors' code: Zenodo 18661874 (CC-BY-4.0), barahona-research-group/dl-raman (Apache-2.0)
Status: code verified, 9 files readable, 7 matches
[35] doi:10.1038/s41467-026-76112-3 [paper, data]
Photostimulation improves maturation of human photoreceptors.
Journal: Nature communications
Status: data only, 1 dataset cited
[36] Code ↔ Paper doi:10.3389/ftox.2026.1816944 [paper, repository]
Neurodevelopmental outcomes relevant to autism in juvenile mice exposed to PCB 11 in the maternal diet throughout gestation and lactation.
Journal: Frontiers in toxicology
Authors' code: Zenodo 19716216 (CC-BY-4.0)
Status: code verified, 4 files readable

Friday, 7 August 2026 (2 papers)

[37] Code ↔ Paper doi:10.1126/sciadv.aed0772 [paper, repository]
Deep learning reveals a neurocomputational mechanism predicting depression risk in adolescents.
Journal: Science advances
Authors' code: Zenodo 18647146 (CC-BY-4.0)
Status: code verified, 5 files readable, 3 matches
[38] doi:10.1016/j.cdnut.2026.109508 [paper]
Maternal Diet Enrichment in <i>n</i>-3 Long-Chain Polyunsaturated Fatty Acids during Pregnancy and Lactation Improves Their Transfer from the Mother to the Offspring and Counterbalances High-Fat Diet-Induced Alterations in a Sex-Dependent Manner in Rats.
Journal: Current developments in nutrition
Status: code on request

Thursday, 6 August 2026 (2 papers)

[39] Code ↔ Paper doi:10.1002/advs.202519893 [paper, repository]
NeuroSuite for Long-Term Functional and Structural Studies of Air-Liquid Interface Cerebral Organoids.
Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)
Authors' code: BelNeuroCoding/NeuroMaps (MIT), madlancaster/Neuroweb (no license), Zenodo 19120269 (CC-BY-4.0)
Status: code verified, 1,714 files readable, 11 matches
[40] Code ↔ Paper doi:10.3389/fonc.2026.1886395 [paper, repository]
Resources are associated with functional outcome and brain morphometry in childhood cancer survivors.
Journal: Frontiers in oncology
Authors' code: SCAN-NRAD/DL-DiReCT (BSD-3-Clause)
Status: code verified, 15 files readable, 2 matches

Wednesday, 5 August 2026 (4 papers)

[41] Code ↔ Paper doi:10.1371/journal.pone.0353139 [paper, repository]
No developmental fronto-parietal shift in brain activation during mental arithmetic across the lifespan: A registered report.
Journal: PloS one
Authors' code: OSF 6emdy (no license)
Status: empty repository
[42] Code ↔ Paper doi:10.1126/sciadv.adw5487 [paper, repository]
Early fate diversification of radial glial progenitors during corticogenesis.
Journal: Science advances
Authors' code: Zenodo 14609057 (CC-BY-4.0)
Status: code verified, 3 files readable, 2 matches
[43] Code ↔ Paper doi:10.21203/rs.3.rs-10335768/v1 [paper, repository]
Interneurons in the subplate are associated with cortical maturation across the foetal human cortex
Journal: Research Square (preprint)
Authors' code: OSF 8s6ka (no license)
Status: code verified, 3 files readable
[44] Code ↔ Paper doi:10.1016/j.bpr.2026.100280 [paper, repository]
Morphometric analysis reveals that the chick cranial neural tube expands as an active shell.
Journal: Biophysical reports
Authors' code: nchahare/spatchcocking (MIT)
Status: code verified, 23 files readable, 16 matches

Saturday, 1 August 2026 (4 papers)

[45] Code ↔ Paper doi:10.1002/nbm.70349 [paper, repository]
Susceptibility Source Separation Unveils Paramagnetic and Diamagnetic Trajectories in Healthy Brains From 5 to 90 Years.
Journal: NMR in biomedicine
Authors' code: SNU-LIST/chi-separation (no license), SNU-LIST/chi_sepnet (other), AMRI-Lab/APART-QSM (no license)
Status: code verified, 23 files readable, 4 matches
[46] Code ↔ Paper doi:10.1002/brb3.71581 [paper, repository]
Blunted Reward Responsiveness During Social Feedback: Associations with Peer Victimization and Anhedonia in Socially Anxious Adolescents.
Journal: Brain and behavior
Authors' code: daisylabhub/ARSA (no license)
Status: code verified, 6 files readable, 3 matches
[47] doi:10.1002/pchj.70113 [paper]
Shared and Unique Patterns of Dysregulated Dual Systems Between Adolescent Problematic Video Gaming and ADHD.
Journal: PsyCh journal
Status: code on request
[48] doi:10.1002/nbm.70355 [paper]
High-Resolution Diffusion Kurtosis Imaging of Hippocampus Subfields Across the Healthy Lifespan.
Journal: NMR in biomedicine
Status: code on request

Thursday, 30 July 2026 (3 papers)

[49] Code ↔ Paper doi:10.1016/j.ebiom.2026.106408 [paper, repository]
Microcephaly-like phenotype triggered by novel reassortant and prototypic Oropouche virus strains in brain organoids.
Journal: EBioMedicine
Status: code verified, 6 files readable, 6 matches
[50] Code ↔ Paper doi:10.1162/imag.a.1316 [paper, repository]
Longitudinal MRI template of the baboon brain from birth to adolescence.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: arnaudletroter/BABACOOL (no license)
Status: code verified, 23 files readable, 6 matches
[51] Code ↔ Paper doi:10.1016/j.isci.2026.117012 [paper, repository]
Multi-level static and dynamic graph-theoretical analyses of resting-state functional networks in a Chinese cohort of preterm neonates.
Journal: iScience
Authors' code: tpengfdu-eng/neonate_GT (no license)
Status: code verified, 10 files readable, 5 matches

Wednesday, 29 July 2026 (1 paper)

[52] doi:10.1016/j.mocell.2026.100387 [paper, data]
USP15 mutation associated with autism spectrum disorder alters progenitor fate and neuronal maturation in human brain organoids.
Journal: Molecules and cells
Status: data only, 1 dataset cited

Tuesday, 28 July 2026 (2 papers)

[53] doi:10.1073/pnas.2513126123 [paper, data]
The cortical scene processing network emerges in infancy, prior to independent navigation experience.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 2 datasets cited
[54] Code ↔ Paper doi:10.1016/j.dcn.2026.101791 [paper, repository]
Age-related differences in hippocampal network engagement during safety processing in adolescents.
Journal: Developmental cognitive neuroscience
Authors' code: OSF v3kpx (no license)
Status: code verified, 6 files readable, 3 matches

Monday, 27 July 2026 (1 paper)

[55] Code ↔ Paper doi:10.1038/s43856-026-01510-z [paper, repository]
Mapping genetic convergence across brain structure, mental health, and cardiometabolic disease.
Journal: Communications medicine
Authors' code: BioPsyk/cleansumstats (no license), bulik/ldsc (GPL-3.0), comorment/ldsc (GPL-3.0), precimed/mix3r (no license), GenomicSEM/GenomicSEM (GPL-3.0), precimed/pleiofdr (GPL-3.0)
Status: code verified, 313 files readable, 4 matches

Friday, 24 July 2026 (3 papers)

[56] Code ↔ Paper doi:10.1007/s10519-026-10274-0 [paper, repository]
ADHD and Student Grades in Children from the ABCD Study<sup>®</sup>: A Twin and Siblings Study.
Journal: Behavior genetics
Authors' code: lf-araujo/2023-mrdoc2-EA-ADHD (no license)
Status: empty repository
[57] Code ↔ Paper doi:10.1007/s12021-026-09795-0 [paper, repository]
Temporal Topology Provides an Interpretable Framework for Neuronal Morphogenesis.
Journal: Neuroinformatics
Authors' code: Zenodo 20813267 (CC-BY-4.0)
Status: code verified, 10 files readable, 2 matches
[58] Code ↔ Paper doi:10.1016/j.dcn.2026.101789 [paper, repository]
Feasibility of precision functional mapping in youth multi-echo fMRI data.
Journal: Developmental cognitive neuroscience
Authors' code: OSF kgvsb (no license)
Status: code verified, 29 files readable, 6 matches

Thursday, 23 July 2026 (1 paper)

[59] doi:10.3390/genes17080849 [paper]
Deciphering the Role of LNX2 as a Potential Contributor to Neurodevelopmental Disorders.
Journal: Genes
Status: data only

Monday, 20 July 2026 (2 papers)

[60] Code ↔ Paper doi:10.1038/s41467-026-75273-5 [paper, repository]
Spinal cord regeneration deploys cell-type specific developmental and non-developmental strategies to restore neuron diversity.
Journal: Nature communications
Authors' code: angellswearera/scRNAseq_xenopus_regen_wills (no license), Zenodo 20549290 (CC-BY-4.0)
Status: code verified, 40 files readable, 17 matches
[61] doi:10.1016/j.isci.2026.116623 [paper]
Clinical 2D MRI radiomics for infant brain age and trajectory modeling.
Journal: iScience
Status: code on request

Friday, 17 July 2026 (1 paper)

[62] Code ↔ Paper doi:10.1038/s41467-026-75722-1 [paper, repository]
Single-nucleus analysis of the adult human olfactory epithelium uncovers shared neurogenesis programs with the brain.
Journal: Nature communications
Authors' code: well.ox.ac.uk/~wrayner/tools (no license), Zenodo 20867452 (CC-BY-4.0), Zenodo 20867451 (CC-BY-4.0), litingsong/oe_nn (no license)
Status: code verified, 30 files readable, 9 matches

Thursday, 16 July 2026 (2 papers)

[63] doi:10.1242/bio.062675 [paper, data]
Signalling through RXRβ and its agonist, bexarotene, promotes neuron formation in Xenopus laevis embryos.
Journal: Biology open
Status: data only, 1 dataset cited
[64] Code ↔ Paper doi:10.1038/s41467-026-75582-9 [paper, repository]
Biophysical modeling of anatomically realistic prenatal cortical folding development.
Journal: Nature communications
Status: code verified, 36 files readable, 4 matches

Wednesday, 15 July 2026 (2 papers)

[65] Code ↔ Paper doi:10.1126/sciadv.aed6110 [paper, repository]
Scent of a father: Paternal body odors boost interbrain synchrony.
Journal: Science advances
Authors' code: Zenodo 18358991 (CC-BY-4.0)
Status: code verified, 1 file readable, 2 matches
[66] doi:10.3390/biomedicines14071585 [paper, data]
Live Visualization of Endoplasmic Reticulum Redox Potential in Zebrafish Embryos Reveals Region-Specific Heterogeneity.
Journal: Biomedicines
Status: data only, 4 datasets cited

Tuesday, 14 July 2026 (2 papers)

[67] doi:10.1038/s41421-026-00914-4 [paper, data]
Identification of a novel deeply quiescent neural stem cell population in the subventricular zone: a potential source for brain repair.
Journal: Cell discovery
Status: data only, 1 dataset cited
[68] Code ↔ Paper doi:10.1038/s41467-026-74959-0 [paper, repository]
Sensory nerve-derived signaling coordinates oropharyngeal structural organization that supports suckling and vocalization in neonatal mice.
Journal: Nature communications
Authors' code: Zenodo 20251696 (CC-BY-4.0), Zenodo 15085996 (CC-BY-4.0), chailabusc/code (no license)
Status: code verified, 14 files readable, 5 matches

Monday, 13 July 2026 (4 papers)

[69] doi:10.1016/j.celrep.2026.117685 [paper]
Tanycyte BMAL1 regulates high-fat diet weight gain and shapes arcuate neurogenesis in female mice.
Journal: Cell reports
Status: code on request
[70] Code ↔ Paper doi:10.1371/journal.pbio.3003897 [paper, repository]
Meis1 isoform diversity orchestrates neural progenitor differentiation by regulating ATOH1 degradation at distinct subcellular compartments.
Journal: PLoS biology
Authors' code: Zenodo 20581171 (CC-BY-4.0), hoshino-lab/meis1-isoform-code (no license)
Status: code verified, 12 files readable, 5 matches
[71] Code ↔ Paper doi:10.1162/imag.a.1293 [paper, repository]
PANDA: Patch-based unsupervised deep learning for brain anomaly detection via age prediction in fetal MRI.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: yingqihao2022/PANDA (MIT), birthlab/PANDA (MIT)
Status: code verified, 14 files readable, 2 matches
[72] Code ↔ Paper doi:10.1016/j.dadr.2026.100463 [paper, repository]
Substance use patterns from late childhood to mid-adolescence: Updates on the Adolescent Brain Cognitive Development Study.
Journal: Drug and alcohol dependence reports
Authors' code: OSF dgqc9 (no license)
Status: code verified, 5 files readable, 1 match

Saturday, 11 July 2026 (2 papers)

[73] doi:10.1002/smll.74538 [paper, data]
Stress-Adaptive Biomaterials With Tunable Yielding Architectures Regulate Organoid Morphogenesis.
Journal: Small (Weinheim an der Bergstrasse, Germany)
Status: data only, 1 dataset cited
[74] Code ↔ Paper doi:10.1007/s00429-026-03152-2 [paper, repository]
Limb-selective regions in the lateral temporal lobe shrink from childhood to adulthood.
Journal: Brain structure & function
Authors' code: vistalab/vistasoft (no license), selinacohnen/Limb-selective-regions-in-the-LTL (no license)
Status: code verified, 2,003 files readable, 3 matches

Friday, 10 July 2026 (1 paper)

[75] Code ↔ Paper doi:10.1038/s44318-026-00848-3 [paper, repository]
Mechanical constraints regulate embryonic stem cell mitosis in the developing brain.
Journal: The EMBO journal
Status: empty repository, 1 file readable

Thursday, 9 July 2026 (3 papers)

[76] doi:10.1002/advs.76479 [paper]
RPLP2 Mediates the Beneficial Effects of Exercise on Stress Resistance Through Muscle-Brain Communication.
Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)
Status: data only
[77] doi:10.1016/j.isci.2026.116704 [paper]
Domain-general and language-specific brain networks are differentially associated with verbal intelligence during development.
Journal: iScience
Status: code on request
[78] Code ↔ Paper doi:10.3389/fmicb.2026.1849097 [paper, repository]
Gut microbiota dysbiosis in adolescent depression: a comparative analysis with adult depression and healthy adolescent.
Journal: Frontiers in microbiology
Authors' code: rdpstaff/classifier (GPL-2.0)
Status: code verified, 106 files readable

Wednesday, 8 July 2026 (1 paper)

[79] doi:10.3389/fnmol.2026.1844602 [paper, data]
Prenatal and neonatal housing conditions affect anxiety-like behavior in adulthood in rats and interact with brain-derived neurotrophic factor (BDNF) Val66Met to alter expression of BDNF and stress markers in the ventral hippocampus.
Journal: Frontiers in molecular neuroscience
Status: data only, 1 dataset cited

Tuesday, 7 July 2026 (2 papers)

[80] Code ↔ Paper doi:10.7554/elife.107088 [paper, repository]
Development of auditory and spontaneous movement responses to music over the first postnatal year.
Journal: eLife
Authors' code: tnguyen1992/tinydancer (CC0-1.0)
Status: code verified, 65 files readable, 6 matches
[81] doi:10.1162/opmi.a.363 [paper]
Experience Alone Can Generate Human Face Specialization: Evidence From Deep Learning Models.
Journal: Open mind : discoveries in cognitive science
Status: code on request

Monday, 6 July 2026 (5 papers)

[82] Code ↔ Paper doi:10.1073/pnas.2511442123 [paper, repository]
Time-resolved morphological and transcriptomic characterization of early enteric neuron subtype emergence in chick.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: forge.univ-lyon1.fr/melis/castellani_lab (no license)
Status: code verified
[83] Code ↔ Paper doi:10.1016/j.ebiom.2026.106367 [paper, repository]
Linking maternal blood pressure with fetal cerebral haemodynamics and cortical growth in congenital heart disease.
Journal: EBioMedicine
Authors' code: FNNDSC (no license)
Status: code verified
[84] Code ↔ Paper doi:10.1117/1.nph.13.3.035001 [paper, repository]
Understanding variability in full-term newborns' fNIRS data: the impact of birth weight and gestational age on infants' speech perception abilities.
Journal: Neurophotonics
Authors' code: OSF 6mzqp (no license)
Status: code verified, 12 files readable, 2 matches
[85] doi:10.1093/psyrad/kkag025 [paper, data]
White matter functional connectome topology and its clinical correlations in adolescent major depressive disorder.
Journal: Psychoradiology
Status: data only, 2 datasets cited
[86] doi:10.3389/fimmu.2026.1835359 [paper, data]
Perinatal morphine exposure induces chromatin and transcriptomic remodeling to alter immune and metabolic function.
Journal: Frontiers in immunology
Status: data only, 1 dataset cited

Saturday, 4 July 2026 (1 paper)

[87] Code ↔ Paper doi:10.1016/j.dcn.2026.101775 [paper, repository]
Neonatal brain-age models in full- and preterm infants.
Journal: Developmental cognitive neuroscience
Authors' code: lukassnoek/mvca (MIT)
Status: code verified, 21 files readable

Thursday, 2 July 2026 (3 papers)

[88] Code ↔ Paper doi:10.1111/cge.70204 [paper, repository]
Phenotypic Characterization of Five Children With PACS1-NDD: Longitudinal Insights Into Development, Behavior, and Brain.
Journal: Clinical genetics
Authors' code: danizoeller/myMixed-ModelsTrajectories (no license)
Status: dead link
[89] doi:10.3390/s26134167 [paper, data]
M2EEG-VR: Validation of EEG Visualization and Sonification for the Detection of Neonatal Seizures on a Virtual Reality Platform.
Journal: Sensors (Basel, Switzerland)
Status: data only, 1 dataset cited
[90] doi:10.3389/fcell.2026.1809251 [paper, data]
Pbx1 and Pbx3 cooperatively regulate intermediate progenitor genesis and corticogenesis in the mouse neocortex.
Journal: Frontiers in cell and developmental biology
Status: data only, 3 datasets cited

Wednesday, 1 July 2026 (8 papers)

[91] doi:10.1111/desc.70214 [paper, data]
Hemodynamic Responses to Word Forms in Japanese Infant-Directed Vocabulary in 5- and 9-Month-Old Infants: Early Sensitivity to Prosodic Structure and Emergence of Prosodic Representations.
Journal: Developmental science
Status: data only, 1 dataset cited
[92] doi: [paper, data]
Orientation-Aware Diffusion Super-Resolution for 3T-Like Fetal MRI from Routine 1.5T Scans.
Journal: Proceedings of machine learning research
Status: data only, 1 dataset cited
[93] doi:10.1038/s41467-026-75063-z [paper, data]
Loss of Echs1 in neural stem and progenitor cells impairs neurogenesis via ER stress activation and lipid metabolic reprogramming.
Journal: Nature communications
Status: data only, 1 dataset cited
[94] Code ↔ Paper doi:10.1038/s41562-026-02486-5 [paper, repository]
Genome-wide association studies of infant and toddler temperament in European and multi-ancestry populations.
Journal: Nature human behaviour
Authors' code: precimed/python_convert (GPL-3.0), PerlineDemange/GeneticNurtureNonCog (no license)
Status: code verified, 54 files readable, 3 matches
[95] doi:10.1186/s13073-026-01699-7 [paper, data]
De novo variants in NPTN cause a neurodevelopmental disorder with autism and neuroplastin-PMCA hypofunction.
Journal: Genome medicine
Status: data only, 1 dataset cited
[96] Code ↔ Paper doi:10.1093/schbul/sbag045 [paper, repository]
Cortical Iron and Mesostriatal Dopamine Function in Schizophrenia: A Positron Emission Tomography and Magnetic Resonance Imaging Study.
Journal: Schizophrenia bulletin
Authors' code: lukevano/KCL_Neuromelanin-MRI (CC-BY-NC-4.0)
Status: code verified, 4 files readable, 2 matches
[97] Code ↔ Paper doi:10.1111/infa.70114 [paper, repository]
Statistics in Motion: Does the Infant Motor System Predict Actions Based on Their Transitional Probability?
Journal: Infancy : the official journal of the International Society on Infant Studies
Authors' code: TommasoGhilardi/Statistics-in-Motion (no license)
Status: code verified, 19 files readable, 2 matches
[98] Code ↔ Paper doi:10.1117/1.nph.13.3.035006 [paper, repository]
Characterizing developmental changes in infant habituation using functional change point detection.
Journal: Neurophotonics
Authors' code: sam-beaton/fcpt (MIT)
Status: code verified, 38 files readable, 8 matches

Tuesday, 30 June 2026 (3 papers)

[99] doi:10.1128/jvi.00656-26 [paper, data]
Neurotropism and interferon-dominated immune responses in a mouse-adapted coxsackievirus A16 infection model.
Journal: Journal of virology
Status: data only, 1 dataset cited
[100] Code ↔ Paper doi:10.1038/s42003-026-10402-w [paper, repository]
Temporal orchestration of transcriptional and epigenomic programming underlying maternal embryonic diapause in a cricket model.
Journal: Communications biology
Authors' code: Kataoka-K-Lab/Dnigrofasciatus_EggDiapause (no license)
Status: code verified, 36 files readable, 9 matches
[101] doi:10.1016/j.xpro.2026.104667 [paper, data]
Protocol for diffusion magnetic resonance imaging and tractography in ex vivo mouse models.
Journal: STAR protocols
Status: data only, 2 datasets cited

Monday, 29 June 2026 (1 paper)

[102] doi:10.1186/s12868-026-01018-1 [paper, data]
Combined maternal separation and limited bedding-nesting increase goal tracking, delay discounting, and impulsive action, and moderate sign-tracking-perseverance associations in male rats.
Journal: BMC neuroscience
Status: data only, 1 dataset cited

Saturday, 27 June 2026 (1 paper)

[103] doi:10.1016/j.dcn.2026.101770 [paper, data]
Neural representations of the value of helping the family during adolescence.
Journal: Developmental cognitive neuroscience
Status: data only, 1 dataset cited

Friday, 26 June 2026 (1 paper)

[104] doi:10.1038/s41598-026-59018-4 [paper]
Gut microbiome composition and predicted functions relate to growth and behavior in a Japanese preschool cohort.
Journal: Scientific reports
Status: code on request

Thursday, 25 June 2026 (2 papers)

[105] doi:10.1097/ee9.0000000000000490 [paper, data]
Within- and between-study site variations in ambient air pollution exposure at ages 9-10 years in the Adolescent Brain Cognitive Development (ABCD) Study.
Journal: Environmental epidemiology (Philadelphia, Pa.)
Status: data only, 1 dataset cited
[106] doi:10.3389/fcell.2026.1816627 [paper, data]
Integrative transcriptomic and proteomic profiling reveals altered thymocyte development and microenvironment remodeling during natural thymic atrophy.
Journal: Frontiers in cell and developmental biology
Status: data only, 1 dataset cited

Wednesday, 24 June 2026 (2 papers)

[107] doi:10.1016/j.xhgg.2026.100637 [paper]
A lethal form of ASCC3 disease: Severe global developmental delay, axial hypotonia, hypoplasia of corpus callosum, hypothyroidism, and micropenis.
Journal: HGG advances
Status: code on request
[108] Code ↔ Paper doi:10.1016/j.bpsgos.2026.100782 [paper, repository]
Early Adversity Imprints Multisystem Biological Aging: A Longitudinal Study of Adversity Dimensions and Aging Phenotypes Across Adolescence.
Journal: Biological psychiatry global open science
Authors' code: cantonacci/stress-bioaging (MIT)
Status: code verified, 14 files readable, 12 matches

Monday, 22 June 2026 (2 papers)

[109] Code ↔ Paper doi:10.1242/dev.205342 [paper, repository]
Proteomic profile of hippocampal growth cones through early postnatal development.
Journal: Development (Cambridge, England)
Status: code verified, 71 files readable, 13 matches
[110] Code ↔ Paper doi:10.1002/advs.202522762 [paper, repository]
Enhancing Maturation of Human Neuromuscular Organoids via Electrical Stimulation.
Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)
Status: code verified, 21 files readable, 18 matches

Friday, 19 June 2026 (1 paper)

[111] Code ↔ Paper doi:10.7554/elife.106347 [paper, repository]
Esr1-dependent signaling and transcriptional maturation in the medial preoptic area of the hypothalamus shape the development of mating behavior during adolescence.
Journal: eLife
Authors' code: theislab/paga (BSD-3-Clause), stuberlab/Hashikawa-Hashikawa-eLife (MIT)
Status: code verified, 36 files readable, 9 matches

Thursday, 18 June 2026 (4 papers)

[112] Code ↔ Paper doi:10.21203/rs.3.rs-9839901/v1 [paper, repository]
Early life ventricular enlargement precedes emergence of autistic traits
Journal: Research Square (preprint)
Authors' code: SVRTK/SVRTK (Apache-2.0)
Status: code verified, 69 files readable
[113] Code ↔ Paper doi:10.1016/j.stemcr.2026.102967 [paper, repository]
Single-cell multiomic approaches define a gradual, spatially regulated epigenetic and transcriptional transition from embryonic to adult neural stem cells.
Journal: Stem cell reports
Authors' code: immunogenomics/harmony (no license)
Status: code verified, 32 files readable, 2 matches
[114] Code ↔ Paper doi:10.1038/s41467-026-74572-1 [paper, repository]
The hippocampus becomes topographically and functionally specialized along the longitudinal axis with development.
Journal: Nature communications
Authors' code: JonahKember/precision_mapping (no license), Zenodo 20086215 (CC-BY-4.0), codeocean:7323987 (no license), jonahkember/posterior_hippocampus_development (no license)
Status: code verified, 19 files readable, 13 matches
[115] Code ↔ Paper doi:10.1002/jcv2.70142 [paper, repository]
Common cause versus dynamic mutualism: Insights into ADHD's common comorbidities.
Journal: JCPP advances
Authors' code: OSF vf2as (no license), OSF n7uka (no license)
Status: code verified

Wednesday, 17 June 2026 (1 paper)

[116] Code ↔ Paper doi:10.1038/s41467-026-73366-9 [paper, repository]
Cortical and white matter myelination proceed in concert during early infancy.
Journal: Nature communications
Authors' code: EduNeuroLab/WMGMMyelinInfants (no license)
Status: code verified, 10 files readable, 11 matches

Tuesday, 16 June 2026 (1 paper)

[117] Code ↔ Paper doi:10.1038/s41598-026-57714-9 [paper, repository]
Moderate electrical muscle stimulation during voluntary movement does not disrupt the sense of agency or ownership.
Journal: Scientific reports
Authors' code: Zenodo 18678186 (CC-BY-4.0)
Status: code verified, 1 file readable

Monday, 15 June 2026 (2 papers)

[118] doi:10.3758/s13423-026-02911-w [paper, data]
This sounds important: Electrophysiological responses reveal a dedicated learning mechanism to process salient consonant sounds in human newborns.
Journal: Psychonomic bulletin & review
Status: data only, 1 dataset cited
[119] doi:10.1162/imag.a.1270 [paper, data]
Disentangling the unique associations of age, pubertal stage, and pubertal hormones with white matter microstructure in childhood and adolescence.
Journal: Imaging neuroscience (Cambridge, Mass.)
Status: data only, 1 dataset cited

Saturday, 13 June 2026 (4 papers)

[120] Code ↔ Paper doi:10.1186/s40708-026-00312-2 [paper, repository]
Synergistic and redundant information dynamics exhibit dissociable alterations across schizophrenia and neurodevelopmental conditions.
Journal: Brain informatics
Authors' code: gpreti/GSP_StructuralDecouplingIndex (Apache-2.0), nitrc.org/projects/conn (no license), hinatanago/PhiID_analysis (no license)
Status: code verified, 43 files readable, 2 matches
[121] Code ↔ Paper doi:10.1038/s41467-026-74274-8 [paper, repository]
Regional sex differences in human cortical anatomy vary in their morphometric bases and overlap with sex chromosomal and gonadal influences.
Journal: Nature communications
Status: code verified, 9 files readable, 10 matches
[122] Code ↔ Paper doi:10.1038/s41467-026-74320-5 [paper, repository]
Spatial architecture of autism pathogenesis reveals mosaic structural disarray during early development.
Journal: Nature communications
Authors' code: Zenodo 19229995 (CC-BY-4.0), jinyueliu0/spatial-signaling-score (no license)
Status: code verified, 20 files readable, 10 matches
[123] doi:10.1186/s12868-026-01016-3 [paper, data]
Proteomic profiling reveals structural and adhesion pathways regulated by the inverted CHRFAM7AΔ2bp variant in human neural progenitor cells.
Journal: BMC neuroscience
Status: data only, 1 dataset cited

Thursday, 11 June 2026 (3 papers)

[124] Code ↔ Paper doi:10.1242/jeb.252287 [paper, repository]
Prenatal acoustic communication triggers adaptive vascular programming in the developing avian brain.
Journal: The Journal of experimental biology
Status: code verified, 7 files readable, 14 matches
[125] doi:10.1016/j.stemcr.2026.102953 [paper]
Effects of voluntary exercise, diet, and selenium on hypothalamic adult neurogenesis.
Journal: Stem cell reports
Status: code on request
[126] Code ↔ Paper doi:10.1016/j.isci.2026.116320 [paper, repository]
Machine learning-based gait classification and genome-wide association identify a QTL for gait type in Colombian paso horses.
Journal: iScience
Authors' code: JianYang-Lab/GCTA (GPL-3.0), saigegit/SAIGE (GPL-3.0)
Status: code verified, 134 files readable, 4 matches

Wednesday, 10 June 2026 (3 papers)

[127] doi:10.64898/2026.06.08.26355206 [paper, data]
A canary in the mind: A single baseline brain scan predicts adolescent depression and anxiety one year later
Journal: medRxiv (preprint)
Status: data only, 2 datasets cited
[128] doi:10.1126/sciadv.aed3625 [paper, data]
Mice produce interneurons in the septum as a response to aversive experiences and antidepressant treatment.
Journal: Science advances
Status: data only, 1 dataset cited
[129] doi:10.1016/j.tjnut.2026.101666 [paper]
Prior Pregnancies Deplete Maternal Folate Status and Increase Risks of Neural Tube Defects in Addis Ababa, Ethiopia.
Journal: The Journal of nutrition
Status: code on request

Tuesday, 9 June 2026 (1 paper)

[130] doi:10.1159/000552886 [paper, data]
Early Metabolic Alterations Are Associated with Intraventricular Hemorrhage and Its Complications in Very Preterm Infants.
Journal: Neonatology
Status: data only, 1 dataset cited

Monday, 8 June 2026 (2 papers)

[131] doi:10.1038/s41598-026-55790-5 [paper, data]
Parthenogenote-derived brain unveils the critical role of paternal genome in neural development.
Journal: Scientific reports
Status: data only, 1 dataset cited
[132] Code ↔ Paper doi:10.1016/j.isci.2026.116287 [paper, repository]
Neural selectivity for social interactions in the infant brain.
Journal: iScience
Authors' code: OSF 874rw (no license)
Status: code verified, 1 file readable, 2 matches

Friday, 5 June 2026 (5 papers)

[133] Code ↔ Paper doi:10.1186/s12888-026-08253-0 [paper, repository]
Longitudinal changes in amygdala-supplementary motor area connectivity and their association with recurrent self-harm in adolescents with mood disorders.
Journal: BMC psychiatry
Authors' code: HerveAbdi/data4PCCAR (no license)
Status: code verified, 52 files readable, 3 matches
[134] Code ↔ Paper doi:10.1016/j.dcn.2026.101755 [paper, repository]
ABCD-ReproNim: An educational program for responsible and reproducible analyses of ABCD data.
Journal: Developmental cognitive neuroscience
Authors' code: ABCD-ReproNim (no license)
Status: code verified
[135] doi:10.1016/j.isci.2026.116190 [paper]
Behavioral algorithms of ontogenetic switching in larval and juvenile zebrafish phototaxis.
Journal: iScience
Status: code on request
[136] Code ↔ Paper doi:10.21769/bioprotoc.5711 [paper, repository]
Quantitative Analysis of Cell and Tissue Shape During Mouse Cranial Neural Tube Closure.
Journal: Bio-protocol
Authors' code: davidmashburn/SeedWaterSegmenter (other)
Status: code verified, 21 files readable, 1 match
[137] Code ↔ Paper doi:10.1016/j.bbih.2026.101275 [paper, repository]
A protocol for the Teen Bugs study: An integrative, multi-omics approach to understanding the role of the gut microbiome and mesocorticolimbic system in adolescent mental health following early adverse caregiving.
Journal: Brain, behavior, & immunity - health
Authors' code: bablab/bablab_hoffman_metagenomics (no license)
Status: code verified, 7 files readable

Thursday, 4 June 2026 (2 papers)

[138] doi:10.1038/s41398-026-04121-3 [paper]
The sex-specific role of adrenal androgens in youth psychopathology.
Journal: Translational psychiatry
Status: code on request
[139] Code ↔ Paper doi:10.1016/j.isci.2026.116123 [paper, repository]
Developmental manganese exposure, but not concurrent lead, alters social processing selectively in male mice.
Journal: iScience
Authors' code: alexdobin/STAR (MIT)
Status: code verified, 331 files readable

Wednesday, 3 June 2026 (3 papers)

[140] Code ↔ Paper doi:10.1038/s41467-026-73770-1 [paper, repository]
Non-coding structural variants disrupt FOXG1 transcriptional regulation in early neurodevelopment.
Journal: Nature communications
Authors' code: Zenodo 5653535 (MIT), linnarsson-lab/developing-human-brain (BSD-2-Clause), nf-core/cutandrun (MIT)
Status: code verified, 27 files readable, 1 match
[141] doi:10.1016/j.bbih.2026.101280 [paper, data]
Inflammation, fronto-amygdala connectivity, and negative affective reactivity to daily stress in adolescents.
Journal: Brain, behavior, & immunity - health
Status: data only, 1 dataset cited
[142] Code ↔ Paper doi:10.1093/psyrad/kkag022 [paper, repository]
Neurodevelopmental and behavioral correlates of household structure independent of socioeconomic status.
Journal: Psychoradiology
Status: code verified, 2 files readable, 1 match

Tuesday, 2 June 2026 (2 papers)

[143] doi:10.3389/fphar.2026.1803172 [paper, data]
Decoding neuroimmune ferroptotic vulnerability in isoflurane-induced neonatal neurotoxicity via the SLC7A11/GPX4 axis.
Journal: Frontiers in pharmacology
Status: code on request, 1 dataset cited
[144] doi:10.1016/j.ajcnut.2026.101350 [paper]
Early-Life Cumulative Intake of Ultra-Processed Foods and Subcortical Brain Volume at Age Six Years: A Prospective Cohort Study.
Journal: The American journal of clinical nutrition
Status: code on request

Monday, 1 June 2026 (8 papers)

[145] doi:10.1093/ntr/ntag045 [paper, data]
The role of the orbitofrontal cortex in smoking cue-reactivity in onset phase of smoking behavior, a fMRI study in adolescents.
Journal: Nicotine & tobacco research : official journal of the Society for Research on Nicotine and Tobacco
Status: data only, 1 dataset cited
[146] Code ↔ Paper doi:10.1101/gad.353090.125 [paper, repository]
Neural stem cell epigenomes and fate bias are temporally coordinated during mouse cortical development.
Journal: Genes & development
Authors' code: tanaylab/mmcortex (MIT), aidenlab/JuiceMe (MIT), tanaylab/shaman (no license)
Status: code verified, 93 files readable, 17 matches
[147] Code ↔ Paper doi:10.1002/hbm.70519 [paper, repository]
Lifespan Trajectories of Asymmetry in White Matter Tracts.
Journal: Human brain mapping
Authors' code: masilab/asymmetry (no license)
Status: dead link
[148] Code ↔ Paper doi:10.3389/fnins.2026.1817732 [paper, repository]
Evaluating reliability of automated quantitative brain morphometry from fetal T2-weighted MRI.
Journal: Frontiers in neuroscience
Authors' code: FNNDSC (no license)
Status: code verified
[149] Code ↔ Paper doi:10.1002/hbm.70547 [paper, repository]
miniMORPH: A Morphometry Pipeline for Low-Field MRI in Infants.
Journal: Human brain mapping
Authors' code: UNITY-Physics/fw-minimorph (MIT)
Status: code verified, 13 files readable, 5 matches
[150] Code ↔ Paper doi:10.1093/cercor/bhag077 [paper, repository]
The longitudinal development of intrinsic timescales in infancy and their relation to alpha brain rhythm.
Journal: Cerebral cortex (New York, N.Y. : 1991)
Status: code verified, 18 files readable, 9 matches
[151] Code ↔ Paper doi: [paper, repository]
Developing and Validating a Machine Learning Model to Predict Brain Injury in Preterm Infants Using Multisource Data from the Early Postnatal Period
Journal: Children (Basel, Switzerland)
Authors' code: lyrperciver/PBI-APP (no license)
Status: code verified, 2 files readable, 2 matches
[152] Code ↔ Paper doi:10.1016/j.gutmic.2026.100006 [paper, repository]
From microbes to milestones: Gut bacterial abundances and functional pathways associate with neurodevelopment following preterm birth.
Journal: Gut microbiology
Status: code verified

Saturday, 30 May 2026 (1 paper)

[153] Code ↔ Paper doi:10.1002/jcv2.70135 [paper, repository]
Alterations in resting-state functional connectivity relate to psychopathology trajectories during emerging adolescence.
Journal: JCPP advances
Authors' code: Ageyr13/ABCD_RSFC_MLM (no license)
Status: code verified, 2 files readable, 7 matches

Thursday, 28 May 2026 (1 paper)

[154] doi:10.3389/fphar.2026.1773471 [paper, data]
Preliminary exploration of acute limit toxicity testing for nicotinamide mononucleotide in the neonatal population.
Journal: Frontiers in pharmacology
Status: data only, 1 dataset cited

Wednesday, 27 May 2026 (1 paper)

[155] Code ↔ Paper doi:10.1038/s41467-026-73416-2 [paper, repository]
Defective ventral neurogenesis due to midfetal Chd8 mutation drives autistic-like behavior in mice.
Journal: Nature communications
Authors' code: heal-research/arPLS (GPL-2.0), akwamura/Chd8_scRNA-seq (no license), daisukeino/BehavioralAnalysis (no license), Zenodo 19105439 (CC-BY-4.0), Zenodo 19105511 (CC-BY-4.0), kentanitahara/chd8_scrna-seq (no license), kentanitahara/behavioralanalysis (no license)
Status: code verified, 72 files readable, 4 matches

Tuesday, 26 May 2026 (3 papers)

[156] Code ↔ Paper doi:10.1371/journal.pdig.0001442 [paper, repository]
PANDIA: Personalized neuro-symbolic multimodal fusion for interpretable neonatal pain assessment.
Journal: PLOS digital health
Authors' code: oussama123-ai/pandia (MIT)
Status: code verified, 35 files readable, 31 matches
[157] doi:10.1016/j.celrep.2026.117399 [paper, data]
A human corticospinal organoid-slice connectoid model informs enhancer strategies for post-injury axon regrowth.
Journal: Cell reports
Status: code on request, 1 dataset cited
[158] Code ↔ Paper doi:10.1016/j.isci.2026.115970 [paper, repository]
Thyroid hormones maintain parvalbumin neuron functions in the mouse neocortex.
Journal: iScience
Authors' code: jbrocardplatim/Macro_8oxo (no license)
Status: empty repository, 1 file readable

Friday, 22 May 2026 (5 papers)

[159] Code ↔ Paper doi:10.1038/s41467-026-73325-4 [paper, repository]
A scalable Tn5-based method for genome-wide DNA methylation profiling in development and disease.
Journal: Nature communications
Authors' code: EpiGN-EPFL/CmeCUT-Tag (no license), Zenodo 19555724 (CC-BY-4.0)
Status: code verified, 38 files readable, 18 matches
[160] Code ↔ Paper doi:10.1038/s41398-026-04130-2 [paper, repository]
White matter structure-function coupling in neonatal brain and its association with Autism-related traits in early childhood.
Journal: Translational psychiatry
Authors' code: zztute/WM-SFC (no license)
Status: code verified, 41 files readable, 4 matches
[161] Code ↔ Paper doi:10.1038/s44318-026-00806-z [paper, repository]
Interspecific diversity in the neuronal composition of the mammalian cortex arises from heterochrony in neurogenesis.
Journal: The EMBO journal
Authors' code: XD-Sheu/Rodents-temporal-scaling_2026 (no license)
Status: code verified, 12 files readable, 16 matches
[162] Code ↔ Paper doi:10.1016/j.isci.2026.116072 [paper, repository]
Surface-based brain age index reflects hematological impacts on cognitive development in children with beta-thalassemia major.
Journal: iScience
Authors' code: ZhuoshL/SurfGNN (no license)
Status: code verified, 13 files readable
[163] doi:10.3390/microorganisms14061175 [paper, data]
Susceptibility of the Placenta and Fetal Brain to Maternal Probiotic Supplementation.
Journal: Microorganisms
Status: data only, 1 dataset cited

Thursday, 21 May 2026 (2 papers)

[164] doi:10.1038/s41467-026-72982-9 [paper]
Elevated temperature fatally disrupts nuclear divisions in the early Drosophila embryo.
Journal: Nature communications
Status: code on request
[165] doi:10.1186/s13059-026-04084-0 [paper, data]
Histone H1 variants regulate neurodevelopmental transcriptional programs in autism with 16p11.2 deletion.
Journal: Genome biology
Status: data only, 1 dataset cited

Tuesday, 19 May 2026 (1 paper)

[166] doi:10.1038/s41380-026-03641-0 [paper]
Cerebral cortical alterations in adolescent early-onset psychosis: a surface-based morphometry mega-analysis.
Journal: Molecular psychiatry
Status: code on request

Monday, 18 May 2026 (3 papers)

[167] doi:10.1080/19490976.2026.2670854 [paper, data]
<i>Limosilactobacillus reuteri</i> promotes melatonin release from human intestinal organoids via 5'ectonucleotidase activity.
Journal: Gut microbes
Status: data only, 1 dataset cited
[168] Code ↔ Paper doi:10.1093/braincomms/fcag097 [paper, repository]
Long-term effects of preterm birth on cortical folding trajectories in early childhood.
Journal: Brain communications
Authors' code: ilwoolyu/LocalGyrificationIndex (MIT), ilwoolyu/HSD (MIT)
Status: code verified, 26 files readable, 3 matches
[169] doi:10.1162/imag.a.1230 [paper]
Assessment of hPod measured by fNIRS as an indicator of brain development in preterm infants.
Journal: Imaging neuroscience (Cambridge, Mass.)
Status: code on request

Saturday, 16 May 2026 (2 papers)

[170] doi:10.1186/s13041-026-01313-2 [paper, data]
REST deficiency and neurogenic-to-gliogenic shift in down syndrome human cerebral organoids.
Journal: Molecular brain
Status: data only, 2 datasets cited
[171] doi:10.1016/j.dcn.2026.101741 [paper, data]
Pediatric resting EEG collection, preprocessing, and analysis: A systematic review.
Journal: Developmental cognitive neuroscience
Status: data only, 1 dataset cited

Friday, 15 May 2026 (2 papers)

[172] Code ↔ Paper doi:10.1038/s41467-026-73072-6 [paper, repository]
Mapping the spatiotemporal continuum of structural connectivity development across the human connectome in youth.
Journal: Nature communications
Authors' code: CuiLabCIBR/SCDevelopment (no license), Zenodo 19549943 (CC-BY-4.0)
Status: code verified, 52 files readable, 13 matches
[173] doi:10.1097/j.pain.0000000000003999 [paper, data]
Hypermobility and chronic pain in adolescents: diverging functional and neural profiles without sensory differences.
Journal: Pain
Status: data only, 1 dataset cited

Thursday, 14 May 2026 (1 paper)

[174] doi:10.1155/da/2699511 [paper, data]
Fear Generalization in Adolescent Anxiety Disorders: A MEG Study.
Journal: Depression and anxiety
Status: data only, 1 dataset cited

Wednesday, 13 May 2026 (4 papers)

[175] doi:10.1038/s41467-026-72942-3 [paper, data]
MeCP2 Governs maternal hyperandrogenism-induced cortical defects and behavioral alterations via noncanonical AR-dependent regulation of Mef2c.
Journal: Nature communications
Status: data only, 1 dataset cited
[176] Code ↔ Paper doi:10.1038/s41586-026-10490-y [paper, repository]
Lineage and organ signals sequentially build organ intrinsic nervous systems.
Journal: Nature
Authors' code: lezhanglab/Organ-Intrinsic-Nervous-Systems (no license)
Status: code verified, 22 files readable, 20 matches
[177] Code ↔ Paper doi:10.1038/s41586-026-10454-2 [paper, repository]
White matter micro- and macrostructure brain charts for the human lifespan.
Journal: Nature
Authors' code: Zenodo 15367425 (CC-BY-NC-4.0), Zenodo 14058394 (CC-BY-4.0), Zenodo 17144460 (CC-BY-4.0), hub.docker.com/r/kimm58 (no license), Zenodo 18435695 (CC-BY-NC-4.0)
Status: code verified, 2 files readable
[178] Code ↔ Paper doi:10.1093/braincomms/fcag172 [paper, repository]
Early-life blood pressure and midlife brain and cognitive health: tests in two birth cohorts.
Journal: Brain communications
Authors' code: scottchiesa/early-life-bp-cog-brain (no license)
Status: code verified, 3 files readable

Tuesday, 12 May 2026 (2 papers)

[179] Code ↔ Paper doi:10.1038/s42003-026-10237-5 [paper, repository]
Shared subcortical-default mode morphological dysconnectivity in adolescent bipolar disorder, major depressive disorder and schizophrenia.
Journal: Communications biology
Authors' code: figshare 32049330 (CC-BY-4.0)
Status: code verified, 13 files readable, 3 matches
[180] Code ↔ Paper doi:10.7554/elife.107081 [paper, repository]
Cortical motor activity modulates respiration and reduces apnoea in neonates.
Journal: eLife
Status: code verified, 32 files readable, 15 matches

Monday, 11 May 2026 (3 papers)

[181] Code ↔ Paper doi:10.1017/s003329172610405x [paper, repository]
Cortical morphometric inverse divergence in attention-deficit/hyperactivity disorder correlates with cell-type-specific, laminar-specific and developmental transcriptomic signatures.
Journal: Psychological medicine
Status: code verified, 16 files readable, 2 matches
[182] doi:10.1159/000551210 [paper, data]
Maternal Infection Induces Neuronal Structure and Behavioural Alterations in Experimental Meningitis Rat Model.
Journal: Developmental neuroscience
Status: data only, 1 dataset cited
[183] Code ↔ Paper doi:10.1038/s42003-026-09908-0 [paper, repository]
Offspring genetic diversity regulates rearing experiences that predict differential susceptibility to Chd8 haploinsufficiency.
Journal: Communications biology
Status: code verified, 2 files readable, 7 matches

Thursday, 7 May 2026 (3 papers)

[184] Code ↔ Paper doi:10.1242/dev.205258 [paper, repository]
Developmental dynamics of catshark cranial neural crest cells provide insights into gnathostome facial evolution.
Journal: Development (Cambridge, England)
Authors' code: rwnull/insitu_probe_generator (GPL-3.0)
Status: code verified, 5 files readable
[185] Code ↔ Paper doi:10.1016/j.dcn.2026.101738 [paper, repository]
Timing and tempo of puberty and neurodevelopment following adversity: A registered report.
Journal: Developmental cognitive neuroscience
Authors' code: FERNLabUVM/pubertybrain (no license), karalk07/abcd-ela (MIT)
Status: code verified, 24 files readable, 1 match
[186] Code ↔ Paper doi:10.1016/j.dcn.2026.101737 [paper, repository]
Being praised and criticized in adolescents and adults: Age-related changes in neural responses to social evaluations.
Journal: Developmental cognitive neuroscience
Authors' code: OSF fr8mn (no license)
Status: code verified, 6 files readable, 5 matches

Wednesday, 6 May 2026 (2 papers)

[187] Code ↔ Paper doi:10.1242/dev.205423 [paper, repository]
CSF1R+ macrophage and osteoclast depletion impairs neural crest proliferation and craniofacial morphogenesis.
Journal: Development (Cambridge, England)
Authors' code: RosinLabUBC/scRNAseq-code-FM (no license)
Status: code verified, 2 files readable, 2 matches
[188] Code ↔ Paper doi:10.7554/elife.103097 [paper, repository]
Canonical neurodevelopmental trajectories of structural and functional manifolds.
Journal: eLife
Status: code verified, 30 files readable, 40 matches

Monday, 4 May 2026 (3 papers)

[189] Code ↔ Paper doi:10.1038/s41598-026-50046-8 [paper, repository]
Classifying and visualizing medication use in the ABCD study.
Journal: Scientific reports
Authors' code: Daniel-Adan-Lopez/ABCD_Medications (no license)
Status: empty repository, 1 file readable
[190] Code ↔ Paper doi:10.1186/s13059-026-04098-8 [paper, repository]
A LINE-1 insertion upstream of FOXP2 promotes neuronal differentiation during primate evolution.
Journal: Genome biology
Authors' code: ChenYong-RU/MAXIM (GPL-3.0)
Status: code verified, 7 files readable
[191] Code ↔ Paper doi:10.1371/journal.pone.0347582 [paper, repository]
The longitudinal relation between adolescents' learning outcomes and internalizing symptoms: The role of ADHD symptoms.
Journal: PloS one
Authors' code: OSF yw5jv (no license), OSF gw8d3 (no license)
Status: code verified, 2 files readable

Saturday, 2 May 2026 (1 paper)

[192] doi:10.1007/s11682-026-01154-6 [paper]
Subregional hypothalamic volumes associate with childhood conduct problems in healthy adults.
Journal: Brain imaging and behavior
Status: code on request

Friday, 1 May 2026 (5 papers)

[193] Code ↔ Paper doi:10.1111/desc.70187 [paper, repository]
Prenatal Volume in the Bilateral Superior Temporal Gyrus Associates With Children's Expressive Vocabulary at 24-36 Months.
Journal: Developmental science
Authors' code: annikawerwach/child-volume-vocab (CC-BY-4.0)
Status: code verified, 3 files readable, 2 matches
[194] doi:10.1111/desc.70186 [paper]
The Genetic Origin of Uneven Cognitive Profiles in Heritable Neurodevelopmental Conditions and Individual Differences: Computational Investigations.
Journal: Developmental science
Status: code on request
[195] Code ↔ Paper doi:10.1002/hipo.70099 [paper, repository]
The Dentate Gyrus Grows Throughout Life Despite Turnover of Developmentally-Born Neurons.
Journal: Hippocampus
Authors' code: figshare 19319849 (CC-BY-4.0)
Status: empty repository
[196] doi:10.1111/jnc.70448 [paper, data]
Hydroxytyrosol Mitigates Anxiety-Like Behaviors After a Traumatic Experience in Aged Mice in Parallel With Increased Neurogenesis in the Ventral and Dorsal Dentate Gyrus, and Preservation of Gut Microbiota Composition.
Journal: Journal of neurochemistry
Status: data only, 1 dataset cited
[197] doi:10.1002/brb3.71502 [paper]
Post-Stroke Depression Is Associated With Shared Neurodevelopmental Risk and Circuit Disruption.
Journal: Brain and behavior
Status: code on request

Thursday, 30 April 2026 (1 paper)

[198] Code ↔ Paper doi:10.1097/j.pain.0000000000003995 [paper, repository]
Cumulative impacts of early-life interpersonal adversity and persistent/recurrent pain in children: a longitudinal normative modelling study from the ABCD study cohort.
Journal: Pain
Authors' code: centilebrain.org (no license)
Status: code verified

Wednesday, 29 April 2026 (1 paper)

[199] Code ↔ Paper doi:10.3389/fpsyg.2026.1746761 [paper, repository]
<i>From concept to proof:</i> developing a neurofeedback-fNIRS protocol to train self-regulation for music performance anxiety in adolescent musicians.
Journal: Frontiers in psychology
Authors' code: pedrorribeiro/MUSA-Neurofeedback-training (no license)
Status: code verified, 1 file readable

Tuesday, 28 April 2026 (2 papers)

[200] Code ↔ Paper doi:10.1002/advs.202524341 [paper, repository]
Temporal Interference Stimulation Enhances Neural Regeneration.
Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)
Authors' code: Zenodo 15747448 (CC-BY-4.0), pdzialecka/TAH-IHC-analysis (no license)
Status: code verified, 433 files readable, 20 matches
[201] Code ↔ Paper doi:10.1016/j.isci.2026.115912 [paper, repository]
Temporal control of midline crossing via incoherent feedforward and feedback loops regulating Robo3.
Journal: iScience
Status: code verified, 2 files readable

Monday, 27 April 2026 (3 papers)

[202] doi:10.1007/s00429-026-03114-8 [paper, data]
Asymmetry of the sulcal pattern of the anterior cingulate cortex modulates delay discounting.
Journal: Brain structure & function
Status: data only, 1 dataset cited
[203] Code ↔ Paper doi:10.1159/000552189 [paper, repository]
Development of the Gut Microbiota throughout the First Year of Life and Its Association with Socio-Emotional Development into Childhood.
Journal: Developmental neuroscience
Authors' code: rpubs.com/mirjambloemendaal (no license)
Status: code verified
[204] doi:10.1162/imag.a.1223 [paper]
Individualized structure-function coupling reveals behavioral signatures in the adolescent brain.
Journal: Imaging neuroscience (Cambridge, Mass.)
Status: code on request

Saturday, 25 April 2026 (2 papers)

[205] Code ↔ Paper doi:10.1007/s11682-026-01153-7 [paper, repository]
Neuroanatomical signatures of chronotype in young adults.
Journal: Brain imaging and behavior
Status: code verified, 2 files readable
[206] doi:10.1038/s42003-026-10120-3 [paper, data]
Developmental trajectories of somatostatin-positive interneurons in the human auditory cortex from migration to maturation.
Journal: Communications biology
Status: data only, 1 dataset cited

Friday, 24 April 2026 (2 papers)

[207] Code ↔ Paper doi:10.1016/j.dcn.2026.101730 [paper, repository]
Longitudinal development of the anterior insula-nucleus accumbens white matter pathway through adolescence predicts risk taking in young adulthood.
Journal: Developmental cognitive neuroscience
Authors' code: josiahkl/spantracts (no license)
Status: code verified, 11 files readable, 7 matches
[208] Code ↔ Paper doi:10.1016/j.isci.2026.115878 [paper, repository]
Twitching in sleeping premature infants provides a sensitive behavioral assay of early motor control.
Journal: iScience
Authors' code: nyu.databrary.org/volume/1920 (no license)
Status: code verified

Thursday, 23 April 2026 (3 papers)

[209] Code ↔ Paper doi:10.21203/rs.3.rs-9198207/v1 [paper, repository]
Prenatal exposure to maternal steroid hormones and child neurodevelopment: evidence for sex-specific effects in a longitudinal birth cohort
Journal: Research Square (preprint)
Status: code verified, 8 files readable, 5 matches
[210] Code ↔ Paper doi:10.1093/psyrad/kkag013 [paper, repository]
Convergent and divergent spatial topographies of individualized brain functional networks and their developmental origins.
Journal: Psychoradiology
Status: code verified, 1,380 files readable, 21 matches
[211] doi:10.3389/fpsyg.2026.1768430 [paper, data]
From neuromyths to neuroscience literacy: a cross-domain study of brain misconceptions among educators in Chilean special schools.
Journal: Frontiers in psychology
Status: data only, 1 dataset cited

Wednesday, 22 April 2026 (8 papers)

[212] doi:10.1039/d5tb02537k [paper, data]
Stress relaxation timescale and hydrogel network connectivity regulate neural progenitor cell stemness and differentiation.
Journal: Journal of materials chemistry. B
Status: data only, 1 dataset cited
[213] Code ↔ Paper doi:10.1038/s42003-025-09401-0 [paper, repository]
Comparative analysis of milk and brain fatty acids reveals human-specific signatures in brain development.
Journal: Communications biology
Authors' code: Zenodo 10799382 (CC-BY-4.0), wanymen/mammal-lipids (no license)
Status: code verified, 28 files readable, 1 match
[214] Code ↔ Paper doi:10.1038/s44271-026-00457-0 [paper, repository]
Genetic and environmental influences on data missingness in developmental cognitive neuroscience.
Journal: Communications psychology
Authors' code: OSF rqwvc (no license), Zenodo 19333394 (CC-BY-4.0), brainhabit/bt_missingdata (no license)
Status: code verified, 12 files readable, 5 matches
[215] doi:10.1016/j.gim.2026.102585 [paper, data]
Expanding the phenotypic spectrum associated with ZIC1 variants: A neurodevelopmental disorder with and without craniosynostosis.
Journal: Genetics in medicine : official journal of the American College of Medical Genetics
Status: data only, 2 datasets cited
[216] Code ↔ Paper doi:10.1162/netn.a.546 [paper, repository]
Cortical similarity networks in the rat brain: Postnatal development and sensitivity to early life stress.
Journal: Network neuroscience (Cambridge, Mass.)
Authors' code: davidmcclure/svg-to-wkt (no license), rlsmith1/rat_MRI_similarity_networks (no license)
Status: code verified, 85 files readable, 19 matches
[217] doi:10.31083/ap48336 [paper]
Brain Functional Network Alterations in Adolescents With Major Depressive Disorder and Suicidal Attempt: A Resting-State fMRI Study.
Journal: Alpha psychiatry
Status: code on request
[218] doi:10.1016/j.isci.2026.115860 [paper]
The mTOR-Dop1a-Agpat2 axis regulates nuclear phospholipid homeostasis.
Journal: iScience
Status: code on request
[219] Code ↔ Paper doi:10.64898/2026.04.21.26351376 [paper, repository]
Multi-BOUNTI: Multi-lobe Brain vOlUmetry and segmeNtation for feTal and neonatal MRI
Journal: medRxiv (preprint)
Authors' code: SVRTK/perinatal-brain-mri-analysis (GPL-3.0), biomedia/mirtk (Apache-2.0)
Status: code verified, 724 files readable, 4 matches

Tuesday, 21 April 2026 (2 papers)

[220] doi:10.1073/pnas.2528396123 [paper, data]
Uncoupling neocortical neuron fate and migration via a Let-7-RBX2 axis.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited
[221] doi:10.1038/s41598-026-49034-9 [paper, data]
Multimodal preclinical study of long-term effects of prenatal ultrasound on the mouse central nervous system.
Journal: Scientific reports
Status: data only, 1 dataset cited

Monday, 20 April 2026 (1 paper)

[222] Code ↔ Paper doi:10.1016/j.dcn.2026.101727 [paper, repository]
Neonatal brain activity across sleep states: Evidence from resting EEG and auditory event-related potentials.
Journal: Developmental cognitive neuroscience
Authors' code: EBBLab/SA-MADE (no license)
Status: code verified, 4 files readable, 3 matches

Sunday, 19 April 2026 (1 paper)

[223] Code ↔ Paper doi:10.1007/s12672-026-05057-2 [paper, repository]
Nitrogen fertilizer pollution and infant brain/CNS cancer.
Journal: Discover oncology
Status: code verified, 3 files readable

Friday, 17 April 2026 (2 papers)

[224] Code ↔ Paper doi:10.1002/gps3.70014 [paper, repository]
Correspondence between morphological similarity of the left lateral orbitofrontal cortex and neurotransmitter systems in adolescent males with autism.
Journal: General psychiatry
Authors' code: juryxy/JuSpace (no license), Huashuang1221/ASD (no license)
Status: code verified, 36 files readable, 6 matches
[225] doi:10.1162/imag.a.1204 [paper]
Sex-specific associations of gestational age at birth and birth size with early life within-network brain connectivity: An exploratory study.
Journal: Imaging neuroscience (Cambridge, Mass.)
Status: code on request

Thursday, 16 April 2026 (5 papers)

[226] Code ↔ Paper doi:10.1371/journal.pcbi.1013290 [paper, repository]
Developmental and aging changes in brain network switching dynamics revealed by EEG phase synchronization.
Journal: PLoS computational biology
Authors' code: Zenodo 15776182 (CC-BY-4.0)
Status: code verified
[227] doi:10.1038/s41467-026-71619-1 [paper, data]
Structurally exclusive Teneurin complexes orchestrate divergent programs in early cortical development.
Journal: Nature communications
Status: code on request, 6 datasets cited
[228] doi:10.1016/j.stemcr.2026.102893 [paper]
Cytoarchitecture of neurogenic niche and neuroblast clusters in the postnatal microminipig brain.
Journal: Stem cell reports
Status: code on request
[229] doi:10.1117/1.jbo.31.4.047001 [paper]
Noninvasive diffuse optical monitoring of cerebral blood flow and oxygenation responses to intermittent hypoxia in neonatal rats.
Journal: Journal of biomedical optics
Status: code on request
[230] doi:10.3389/fneur.2026.1730761 [paper, data]
Peripheral blood transcriptomics identifies cohesin-chromatin and immune dysregulation in tics and Tourette syndrome.
Journal: Frontiers in neurology
Status: data only, 1 dataset cited

Wednesday, 15 April 2026 (1 paper)

[231] Code ↔ Paper doi:10.7554/elife.96980 [paper, repository]
Heterogeneity of Sonic Hedgehog response dynamics and fate specification in single neural progenitors.
Journal: eLife
Authors' code: xionglab/NT_heterogeneity (CC-BY-4.0)
Status: code verified, 2 files readable

Monday, 13 April 2026 (1 paper)

[232] doi:10.3389/fnut.2026.1776896 [paper, data]
Maternal docosahexaenoic acid supplementation shapes offspring gut microbiota to modulate the gut-brain axis in a sow-piglet model.
Journal: Frontiers in nutrition
Status: data only, 1 dataset cited

Friday, 10 April 2026 (1 paper)

[233] Code ↔ Paper doi:10.1038/s41398-026-04010-9 [paper, repository]
Bullying victimization and brain development: a longitudinal structural magnetic resonance imaging study from adolescence to early adulthood.
Journal: Translational psychiatry
Authors' code: mconnaug/Bullying_Brain_Development (no license)
Status: code verified, 2 files readable, 2 matches

Thursday, 9 April 2026 (3 papers)

[234] Code ↔ Paper doi:10.1038/s41467-026-71415-x [paper, repository]
Regional BOLD variability reflects microstructural maturation and neuronal ensheathment in the preterm infant cortex.
Journal: Nature communications
Status: code verified, 51 files readable, 11 matches
[235] Code ↔ Paper doi:10.1038/s41467-026-71719-y [paper, repository]
Brain functional-structural gradient coupling reflects development, behavior and genetic influences.
Journal: Nature communications
Authors' code: sbci-brain/SBCI_Pipeline (no license), mica-mni/brainspace (BSD-3-Clause), Zhao-team/SF-Gradient-Coupling (MIT), Zenodo 18912522 (CC-BY-4.0)
Status: code verified, 329 files readable, 20 matches
[236] Code ↔ Paper doi:10.1097/pr9.0000000000001437 [paper, repository]
Electroencephalography during acute painful procedures in neonates: a scoping review.
Journal: Pain reports
Authors' code: lukebax/neonate-eeg-pain-scr (Apache-2.0)
Status: code verified, 11 files readable, 1 match

Wednesday, 8 April 2026 (4 papers)

[237] Code ↔ Paper doi:10.1038/s42003-026-09956-6 [paper, repository]
Linking changes in sulcal morphometry to cognitive development from childhood to adolescence.
Journal: Communications biology
Authors' code: rmarkello/abagen (BSD-3-Clause), murraylab/brainsmash (GPL-3.0), yijinshan1/sulcus2025 (no license)
Status: code verified, 93 files readable, 13 matches
[238] Code ↔ Paper doi:10.1186/s13293-026-00885-x [paper, repository]
A transient sex-biased transcriptional program shapes early postnatal L2/3 neuron development.
Journal: Biology of sex differences
Authors' code: emarcosgra/RNAseq-scripts (GPL-3.0)
Status: empty repository, 2 files readable
[239] doi:10.1162/imag.a.1209 [paper]
Naturalistic movie viewing is an effective functional localizer of the fusiform face area in adolescents with and without autism.
Journal: Imaging neuroscience (Cambridge, Mass.)
Status: code on request
[240] Code ↔ Paper doi:10.1155/da/7682055 [paper, repository]
Striosome-Like Structural Connectivity Is Reduced in the Rostral Putamen in Anxiety Disorder.
Journal: Depression and anxiety
Status: code verified, 17 files readable, 2 matches

Tuesday, 7 April 2026 (5 papers)

[241] Code ↔ Paper doi:10.1017/s0033291726104103 [paper, repository]
Linking brain structure to stress reactivity: cingulate surface area predicts acute cortisol responses.
Journal: Psychological medicine
Authors' code: eminSerin/stress-fs-paper (GPL-3.0)
Status: code verified, 22 files readable, 6 matches
[242] doi:10.21203/rs.3.rs-9235100/v1 [paper, data]
Structural Brain Changes Across the Female Lifespan: Puberty, Pregnancy, and Menopause Show Shared and Distinct Trajectories
Journal: Research Square (preprint)
Status: data only, 1 dataset cited
[243] Code ↔ Paper doi:10.1038/s41467-026-71270-w [paper, repository]
Spatiotemporal dynamics of the human cortical functional hierarchy across the lifespan.
Journal: Nature communications
Status: code verified, 1,377 files readable, 14 matches
[244] doi:10.1038/s41684-026-01712-x [paper, data]
Ontogeny of zebrafish behaviors: comparative evaluation of locomotor, social and anxiety parameters in larval, juvenile and adult stages.
Journal: Lab animal
Status: data only, 1 dataset cited
[245] Code ↔ Paper doi:10.1016/j.dcn.2026.101721 [paper, repository]
Neonatal amygdala microstructure and structural connectivity are associated with autistic traits at 2 years of age.
Journal: Developmental cognitive neuroscience
Authors' code: git.ecdf.ed.ac.uk/jbrl/amy-neurodev (no license)
Status: code verified

Friday, 3 April 2026 (3 papers)

[246] Code ↔ Paper doi:10.1038/s41539-026-00419-5 [paper, repository]
Home numeracy experiences are associated with number-related brain activity and connectivity in early childhood.
Journal: NPJ science of learning
Authors' code: OSF vuar8 (no license), BBL-lab/BBL-batch-system (no license)
Status: code verified, 221 files readable, 6 matches
[247] Code ↔ Paper doi:10.1038/s41598-026-42120-y [paper, repository]
Qualitative EEG abnormalities in ASD reflect inhibition-dominated brain dynamics.
Journal: Scientific reports
Authors' code: figshare 31634182 (MIT), rhardstone/fei](https: (no license)
Status: code verified, 10 files readable, 1 match
[248] Code ↔ Paper doi:10.1186/s12880-026-02335-x [paper, repository]
Automatic lateral ventricle and choroid plexus segmentation method in infant brain MR images.
Journal: BMC medical imaging
Authors' code: jhkang0526/Infant_LVCPseg (no license), MIC-DKFZ/nnUNet (Apache-2.0)
Status: code verified, 238 files readable, 3 matches

Thursday, 2 April 2026 (4 papers)

[249] Code ↔ Paper doi:10.1038/s41467-026-71360-9 [paper, repository]
Perinatal brain developmental transition revealed by transcriptomic and proteomic analyses of Bama miniature pigs.
Journal: Nature communications
Authors' code: lmfeng/PBAtlas_Perinatal_Multiome (no license)
Status: code verified, 8 files readable, 15 matches
[250] doi:10.1186/s11689-026-09686-0 [paper, data]
Mis-spliced FMR1 transcripts in human fragile X syndrome neural progenitors and neurons.
Journal: Journal of neurodevelopmental disorders
Status: data only, 1 dataset cited
[251] Code ↔ Paper doi:10.1038/s41598-026-46182-w [paper, repository]
How the influence of cingulate-lingual interactions on event segmentation changes from early to late adolescence.
Journal: Scientific reports
Authors' code: OSF 4q7sc (no license)
Status: code verified, 29 files readable, 10 matches
[252] Code ↔ Paper doi:10.64898/2026.04.01.26349523 [paper, repository]
Developmental brain age gap in prematurity and postnatally emerging delay in congenital heart disease
Journal: medRxiv (preprint)
Status: dead link

Wednesday, 1 April 2026 (7 papers)

[253] Code ↔ Paper doi:10.1093/sleep/zsaf410 [paper, repository]
Does twitch-spindle coupling differ between N2 and N3 sleep in 6-month-olds?
Journal: Sleep
Authors' code: Blumberg-Lab/Chirstiansen-et-al-2026 (no license)
Status: code verified, 9 files readable, 2 matches
[254] Code ↔ Paper doi:10.1002/dneu.70019 [paper, repository]
A Longitudinal Study of Children's Hippocampal Development: Investigating Maternal Physical Activity, Depression, and Education.
Journal: Developmental neurobiology
Authors' code: OSF z82pu (no license)
Status: empty repository
[255] Code ↔ Paper doi:10.1038/s44319-026-00731-6 [paper, repository]
Multifaceted conserved functions of Notch during post-embryonic neurogenesis in the annelid Platynereis.
Journal: EMBO reports
Authors' code: StemDevEvo/Notch-2025 (no license), Zenodo 18341641 (CC-BY-4.0)
Status: code verified, 16 files readable, 3 matches
[256] Code ↔ Paper doi:10.1093/cercor/bhag034 [paper, repository]
Individual differences in adolescent cortical development are associated with neighborhood characteristics: Longitudinal findings from the ABCD study.
Journal: Cerebral cortex (New York, N.Y. : 1991)
Authors' code: OSF avu29 (no license)
Status: code verified, 5 files readable, 5 matches
[257] doi:10.1002/brb3.71358 [paper, data]
Willingness to Undergo Brain Health Testing and Motivation for Lifestyle Changes: Insights From a Survey of the Cuban Population.
Journal: Brain and behavior
Status: data only, 2 datasets cited
[258] doi:10.3390/e28040390 [paper]
Age-Related Changes in EEG Signal Complexity and Behavioral Variability from Childhood to Adulthood: A Multiscale Entropy Approach.
Journal: Entropy (Basel, Switzerland)
Status: code on request
[259] Code ↔ Paper doi:10.64898/2026.03.30.715222 [paper, repository]
Synthetic lumen rounding directs neural progenitor division mode
Journal: bioRxiv (preprint)
Authors' code: mebisuya/BrainOrganoidShape (no license)
Status: code verified, 7 files readable, 1 match

Tuesday, 31 March 2026 (1 paper)

[260] Code ↔ Paper doi:10.64898/2026.03.28.715039 [paper, repository]
Neural correlates of novel word-form learning in developmental language disorder
Journal: bioRxiv (preprint)
Authors' code: OSF n76sz (no license)
Status: code verified, 3 files readable, 1 match

Sunday, 29 March 2026 (1 paper)

[261] Code ↔ Paper doi:10.1080/29933935.2026.2649096 [paper, repository]
The gut microbiota and sleep in infants: a focus on diurnal rhythmicity patterns.
Journal: Gut microbes reports
Status: code verified, 30 files readable, 16 matches

Saturday, 28 March 2026 (2 papers)

[262] doi:10.1038/s41467-026-71162-z [paper, data]
A controllable human spinal cord model with full dorsoventral patterning.
Journal: Nature communications
Status: code on request, 1 dataset cited
[263] Code ↔ Paper doi:10.1016/j.isci.2026.115003 [paper, repository]
The long-term impact of neonatal hypoxic-ischemic brain injury on neural dynamics in deep-layer retrosplenial cortex and hippocampus in mice.
Journal: iScience
Authors' code: Zenodo 18451609 (CC-BY-4.0)
Status: code verified, 8 files readable, 1 match

Friday, 27 March 2026 (1 paper)

[264] Code ↔ Paper doi:10.1017/s0954579426101291 [paper, repository]
Maternal mood entropy and children's hippocampal development: Enduring versus transient effects.
Journal: Development and psychopathology
Status: code verified

Thursday, 26 March 2026 (4 papers)

[265] Code ↔ Paper doi:10.1371/journal.pbio.3003722 [paper, repository]
Prenatal and early postnatal periods differentially shape the maturation of human cortical microstructure and myelin.
Journal: PLoS biology
Authors' code: ThanosTsig/InfantMicro (no license), Zenodo 18910237 (CC-BY-4.0)
Status: code verified, 16 files readable, 4 matches
[266] doi:10.1016/j.stemcr.2026.102861 [paper]
The regenerative role of neural crest stem cells in physical stimuli-enhanced peripheral nerve repair.
Journal: Stem cell reports
Status: code on request
[267] Code ↔ Paper doi:10.1210/jendso/bvag067 [paper, repository]
Embryonic exposure to environmental levels of roundup affects neurodevelopment in zebrafish.
Journal: Journal of the Endocrine Society
Authors' code: figshare 31584445 (CC-BY-4.0)
Status: empty repository
[268] doi:10.1111/bpa.70096 [paper, data]
Artificial intelligence-based statistical modeling delineates architectural distortion in focal cortical dysplasia.
Journal: Brain pathology (Zurich, Switzerland)
Status: data only, 1 dataset cited

Wednesday, 25 March 2026 (3 papers)

[269] Code ↔ Paper doi:10.3390/jintelligence14040051 [paper, repository]
Attentional Impairments and Neural Compensation in Adolescents with High Social Anxiety Traits: A Combined ERP and Functional Connectivity Study.
Journal: Journal of Intelligence
Authors' code: pan.baidu.com/s/1skm0pxnxcuifsfdlxi5uaa (no license)
Status: code verified
[270] Code ↔ Paper doi:10.64898/2026.03.25.714146 [paper, repository]
Distinct signaling center and progenitor identity dynamics initiate human forebrain patterning
Journal: bioRxiv (preprint)
Authors' code: ctucl/pybridizer (no license)
Status: code verified, 5 files readable
[271] Code ↔ Paper doi:10.64898/2026.03.25.714150 [paper, repository]
Functional connectome harmonics capture early brain organization and maturity in neonates
Journal: bioRxiv (preprint)
Status: code verified

Tuesday, 24 March 2026 (3 papers)

[272] doi:10.1038/s41598-026-44992-6 [paper, data]
TUBB2A related epilepsy: novel variants and genotype-phenotype correlation.
Journal: Scientific reports
Status: data only, 1 dataset cited
[273] doi:10.1073/pnas.2537571123 [paper, data]
Cell type diversification and phenotype convergence underlying white fin-ornamentation of cyprinid fishes.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 2 datasets cited
[274] doi:10.1093/braincomms/fcag107 [paper]
Juvenile myoclonic epilepsy heterogeneity uncovered: Z-mapped imaging endophenotypes of cortical and subcortical structures and their clinical, cognitive and psychiatric features.
Journal: Brain communications
Status: code on request

Monday, 23 March 2026 (2 papers)

[275] doi:10.1073/pnas.2427242123 [paper, data]
Unveiling the developmental and tumor-suppressive roles of the p53 variant p53psi.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited
[276] Code ↔ Paper doi:10.1038/s44318-026-00752-w [paper, repository]
Enhanced P-TEFb activity compromises dentate gyrus neurogenesis in mice.
Journal: The EMBO journal
Authors' code: ketone08/Larp7_KO_mouse (no license)
Status: code verified, 5 files readable, 1 match

Friday, 20 March 2026 (2 papers)

[277] doi:10.1161/strokeaha.125.052941 [paper, data]
Predicting Outcome After Newborn Stroke: A Lesion Network Mapping Study Leveraging Large-Scale Data.
Journal: Stroke
Status: data only, 1 dataset cited
[278] doi:10.1038/s42003-026-09855-w [paper, data]
Early life chronic stress-disrupted activity of the dorsal raphe nucleus selectively drives behavioral impairments.
Journal: Communications biology
Status: data only, 1 dataset cited

Wednesday, 18 March 2026 (5 papers)

[279] doi:10.1073/pnas.2518294123 [paper, repository]
Mild SARS-CoV-2 maternal infection in mice induces transient offspring neurodevelopmental aberrance.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: caihelen/covid-pregnancy (no license)
Status: code verified, 12 files readable, 7 matches
[280] doi:10.1073/pnas.2527163123 [paper, data]
A transcription regulator atlas identifies TOX3 as an Atoh1 coactivator in cerebellar development and tumorigenesis.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited
[281] doi:10.1073/pnas.2531595123 [paper, data]
Fetal developmental trajectories following maternal immune activation are shaped by sex chromosome-gonadal interactions.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited
[282] doi:10.1186/s11689-026-09685-1 [paper, repository]
Beta power as a neural correlate of sensory features in autistic individuals.
Journal: Journal of neurodevelopmental disorders
Authors' code: juliechaudet/PSD-Analysis-EEG-HR (no license)
Status: code verified, 1 file readable, 4 matches
[283] doi:10.3390/brainsci16030323 [paper, data]
Neuro-Transcriptomic Responses to Polypharmacological Agents in <i>Danio rerio</i>: Implications for Translational Drug Repurposing in Neurodevelopmental Disorders.
Journal: Brain sciences
Status: data only, 1 dataset cited

Tuesday, 17 March 2026 (2 papers)

[284] doi:10.1172/jci197010 [paper, repository]
l-2-Hydroxyglutarate impairs neuronal differentiation through epigenetic activation of MYC expression.
Journal: The Journal of clinical investigation
Authors' code: wencgu/nac (no license)
Status: code verified, 6 files readable
[285] doi:10.1016/j.dcn.2026.101708 [paper, repository]
The functional foetal brain: A systematic review and meta-analysis.
Journal: Developmental cognitive neuroscience
Authors' code: OSF cxryf (no license)
Status: code verified, 1 file readable, 2 matches

Monday, 16 March 2026 (1 paper)

[286] doi:10.1186/s41747-026-00697-z [paper, data]
Radiomics in fetal brain MRI: a narrative review.
Journal: European radiology experimental
Status: data only, 1 dataset cited

Saturday, 14 March 2026 (1 paper)

[287] doi:10.1038/s42003-026-09845-y [paper, data]
Increased susceptibility to 4-HNE-induced toxicity and impaired development in a model of ALDH4A1-deficient pediatric epilepsy carrying the S352L variant.
Journal: Communications biology
Status: data only, 1 dataset cited

Friday, 13 March 2026 (1 paper)

[288] doi:10.1016/j.xpro.2026.104423 [paper, repository]
Protocol for quality control screening of brain organoid morphology.
Journal: STAR protocols
Authors' code: jboulanger/Organoid_morphology (no license)
Status: empty repository, 1 file readable

Thursday, 12 March 2026 (5 papers)

[289] doi:10.1073/pnas.2510886123 [paper, data]
Hypothalamic endoplasmic reticulum stress drives pubertal precocity due to early-onset obesity in female rodents.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited
[290] doi:10.1038/s42003-026-09831-4 [paper, repository]
Comprehensive large-scale analyses reveal association between brain structure and cognitive ability during adolescence.
Journal: Communications biology
Authors' code: JDYan/Brain-Cognition-Association (no license)
Status: code verified, 3 files readable
[291] doi:10.1016/j.isci.2026.115349 [paper]
Oxytocin ameliorates early life stress-induced anxiety-like behavior by normalizing corticotropin-releasing hormone neuron activity in the PVN.
Journal: iScience
Status: code on request
[292] doi:10.1016/j.isci.2026.115330 [paper]
Passive OPM-MEG paradigm reveals altered brain network organization in children with DLD.
Journal: iScience
Status: code on request
[293] doi:10.1002/btm2.70123 [paper, data]
BrAIn: A comprehensive artificial intelligence-based morphology analysis system for brain organoids and neuroscience.
Journal: Bioengineering & translational medicine
Status: data only, 1 dataset cited

Wednesday, 11 March 2026 (3 papers)

[294] doi:10.1002/adhm.202504889 [paper, repository]
Mapping the Cerebral Organoid Landscape: A Systematic Review of Preclinical 3D Models in Neuroscience.
Journal: Advanced healthcare materials
Authors' code: MaikTungsten/OrganoidMap (no license), Zenodo 18420242 (CC-BY-4.0), organoidmap.cs.uni-tuebingen.de (no license)
Status: code verified, 4,000 files readable
[295] doi:10.1073/pnas.2519586123 [paper, repository]
Personalized functional topography-based multisite brain age prediction modeling reveals divergent neurodevelopment in major depression.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: ALICE1029/topography_MDD (no license)
Status: code verified, 61 files readable, 2 matches
[296] doi:10.64898/2026.03.10.710908 [paper, repository]
Toroidal topology of grid-cell activity precedes spatial navigation during development
Journal: bioRxiv (preprint)
Authors' code: OpatzLab/HanganuOpatzToolbox (GPL-3.0)
Status: code verified, 596 files readable, 8 matches

Tuesday, 10 March 2026 (2 papers)

[297] doi:10.3389/fnsys.2026.1753562 [paper, data]
When the gatekeeper falls: developmental vulnerability of the thalamic reticular nucleus in neonatal and pediatric hypoxic-ischemic brain injury.
Journal: Frontiers in systems neuroscience
Status: data only, 1 dataset cited
[298] doi:10.64898/2026.03.09.710596 [paper, repository]
Infant gut microbiomes contribute to metabolic states that impact brain function
Journal: bioRxiv (preprint)
Authors' code: Zenodo 17652611 (CC-BY-4.0), victoriapascal/gutsmash (AGPL-3.0), medema-group/BiG-SCAPE (AGPL-3.0), morgannprice/PaperBLAST (GPL-3.0), zqfang/GSEApy (BSD-3-Clause)
Status: code verified, 570 files readable, 19 matches

Monday, 9 March 2026 (2 papers)

[299] doi:10.3390/bioengineering13030315 [paper, data]
From Infancy to Aging: Precise Brain Age Estimation via Hybrid CoTResNet3D and CrossViT Models on T1-Weighted Imaging.
Journal: Bioengineering (Basel, Switzerland)
Status: data only, 2 datasets cited
[300] doi:10.1016/j.dcn.2026.101706 [paper, repository]
BIBSNet: A deep learning baby image brain segmentation network for MRI scans.
Journal: Developmental cognitive neuroscience
Authors' code: Zenodo 7106148 (other-open)
Status: code verified, 2 files readable

Saturday, 7 March 2026 (2 papers)

[301] doi:10.1038/s41467-026-70135-6 [paper, repository]
Neuroimaging subtypes of adolescent sleep insufficiency stratify natural short sleepers from comorbidity or environment driven insufficiency.
Journal: Nature communications
Authors' code: ucl-pond (no license)
Status: code verified
[302] doi:10.1016/j.ynstr.2026.100788 [paper, data]
Different early-life adversity paradigms have disparate effects on maternal care, neuronal activation, and social behavior in developing mice.
Journal: Neurobiology of stress
Status: data only, 1 dataset cited

Friday, 6 March 2026 (2 papers)

[303] doi:10.3389/fpsyt.2026.1756782 [paper, repository]
ADHD and gaming addiction in adolescents: psychosocial mediators in the adolescent brain cognitive development study.
Journal: Frontiers in psychiatry
Authors' code: Daniel-Adan-Lopez/ABCD_Gaming_ADHD (no license)
Status: empty repository
[304] doi:10.1093/psyrad/kkag009 [paper, repository]
Brain entropy as a biomarker of major depression in adolescents and young adults: insights from multimodal resting-state functional magentic resonance imaging.
Journal: Psychoradiology
Authors' code: zewangnew/BENtbx (GPL-2.0)
Status: code verified, 4 files readable

Thursday, 5 March 2026 (2 papers)

[305] doi:10.1038/s41598-026-41460-z [paper, repository]
NvashA function reveals temporal differences in neural subtype generation in cnidarians.
Journal: Scientific reports
Authors' code: LaydenLab/NvashA_scRNAseq (no license)
Status: code verified, 6 files readable, 5 matches
[306] doi:10.1016/j.stemcr.2026.102832 [paper, repository]
Establishing mouse forebrain organoids as models of intrinsic cortical network assembly.
Journal: Stem cell reports
Authors' code: braingeneers/Sakura_final (no license)
Status: dead link

Wednesday, 4 March 2026 (2 papers)

[307] doi:10.1017/s095457942610131x [paper, repository]
Adolescent empathy predicts reduced neural responses to social rejection in adulthood.
Journal: Development and psychopathology
Authors' code: OSF zx5vg (no license)
Status: code verified, 1 file readable
[308] doi:10.1016/j.isci.2026.115222 [paper, data]
Comparative analyses of regional and temporal transcriptomics of early human and mouse central nervous systems.
Journal: iScience
Status: code on request, 2 datasets cited

Tuesday, 3 March 2026 (1 paper)

[309] doi:10.1038/s44323-026-00071-7 [paper, repository]
Tracing infant sleep neurophysiology longitudinally from 3 to 6 months: EEG insights into brain development.
Journal: Npj biological timing and sleep
Authors' code: Andjela-M (no license)
Status: code verified

Monday, 2 March 2026 (3 papers)

[310] doi:10.1101/gad.352886.125 [paper, data]
Independent control of neurogenesis and dorsoventral patterning by NKX2-2.
Journal: Genes & development
Status: data only, 1 dataset cited
[311] doi:10.1016/j.nbd.2026.107341 [paper, data]
ACSS2 mediates prenatal alcohol exposure-related morphological and behavioral phenotypes.
Journal: Neurobiology of disease
Status: data only, 1 dataset cited
[312] doi:10.3390/biom16030375 [paper, repository]
X-Linked EGFP Reporter as a Tool to Examine X-Chromosome Inactivation in Mouse Embryos and Embryonic Fibroblasts.
Journal: Biomolecules
Authors' code: mta.hu/data/dokumentumok (no license)
Status: code verified

Sunday, 1 March 2026 (8 papers)

[313] doi:10.1093/schbul/sbaf171 [paper, data]
Fetal Head Growth and Head Circumference at Birth in Children of Women with Psychotic Disorders and Population-Based Controls.
Journal: Schizophrenia bulletin
Status: data only, 1 dataset cited
[314] doi:10.1093/neuonc/noaf252 [paper, data]
Assessment of molecular tools in pediatric, adolescent, and young adult meningioma highlights the need for lifespan precision in neuro-oncology.
Journal: Neuro-oncology
Status: code on request, 1 dataset cited
[315] doi:10.1111/desc.70114 [paper, repository]
Evidence of Top-Down Sensory Prediction in Neonates Within 2 Days of Birth.
Journal: Developmental science
Authors' code: OSF zvgue (no license)
Status: code verified, 3 files readable
[316] doi:10.1093/g3journal/jkaf306 [paper, repository]
Gli3R-mediated inhibition of hedgehog signaling alters the embryonic transcriptome in zebrafish.
Journal: G3 (Bethesda, Md.)
Authors' code: thymelab/BulkRNASeq (no license)
Status: code verified, 3 files readable
[317] doi:10.1002/dev.70128 [paper, repository]
Socioeconomic Status, the Home Language Environment, Noise Exposure, and the Mismatch Response in Infancy.
Journal: Developmental psychobiology
Authors' code: trollerrenfr/LENA_Scripts (no license)
Status: code verified, 3 files readable
[318] doi:10.1111/ede.70030 [paper, repository]
Enrichment of Neural Crest Cells by Antibody Labeling and Flow Cytometry for Single-Cell Transcriptomics in a Lizard.
Journal: Evolution & development
Authors' code: Zenodo 18544211 (CC-BY-4.0), robinpranter/enrichment-of-neural-crest-cells---supplementary-code (no license)
Status: code verified, 13 files readable, 9 matches
[319] doi:10.1002/hbm.70475 [paper, repository]
The Development of Hippocampal-Cortical Functional Connectivity in Infants and Toddlers.
Journal: Human brain mapping
Authors' code: saudrain/paper_BabyHippos (MIT)
Status: code verified, 14 files readable, 6 matches
[320] doi:10.1111/ede.70034 [paper, data]
Exploring Larval Axolotl Brain Development: Insights Into Developmental and Functional Constraints.
Journal: Evolution & development
Status: data only, 1 dataset cited

Saturday, 28 February 2026 (1 paper)

[321] doi:10.1038/s41598-026-42346-w [paper, repository]
Machine learning algorithm reveals neurodevelopmental signatures of combined family income and neighborhood disadvantage in adolescents.
Journal: Scientific reports
Status: code verified, 5 files readable, 11 matches

Friday, 27 February 2026 (1 paper)

[322] doi:10.3389/fnins.2026.1646144 [paper, repository]
Sex differences in global metrics of brain size across the lifespan.
Journal: Frontiers in neuroscience
Authors' code: SoCoDeN/dimorphism (no license)
Status: code verified, 21 files readable, 2 matches

Thursday, 26 February 2026 (3 papers)

[323] doi:10.1159/000551211 [paper, data]
ARG1 Inhibition after Neonatal Hypoxic-Ischemic Brain Injury.
Journal: Developmental neuroscience
Status: data only, 1 dataset cited
[324] doi:10.1038/s41746-026-02416-9 [paper]
Multicenter validation of AI-enabled ECG for pediatric biological sex prediction.
Journal: NPJ digital medicine
Status: code on request
[325] doi:10.1093/braincomms/fcag060 [paper, repository]
Hippocampal morphometry is altered in infants with congenital heart disease.
Journal: Brain communications
Authors' code: ralidimitrova/GPR_NeoVols (MIT)
Status: code verified, 3 files readable, 1 match

Wednesday, 25 February 2026 (3 papers)

[326] doi:10.1038/s41586-026-10169-4 [paper, data]
Human hippocampal neurogenesis in adulthood, ageing and Alzheimer's disease.
Journal: Nature
Status: data only, 1 dataset cited
[327] doi:10.1186/s12974-026-03742-1 [paper, data]
Lcn2 deficiency leads to long-lasting social impairments independent of maternal immune activation.
Journal: Journal of neuroinflammation
Status: data only, 4 datasets cited
[328] doi:10.1016/j.isci.2026.115071 [paper, repository]
Modeling embryonic heart vascular plexus development and sympathetic innervation on a human heart organoid.
Journal: iScience
Status: code verified, 80 files readable, 8 matches

Tuesday, 24 February 2026 (4 papers)

[329] doi:10.1017/s0954579426101266 [paper]
Anxiety symptoms interact with approach motivations in adolescent risk-taking.
Journal: Development and psychopathology
Status: code on request
[330] doi:10.1186/s12916-026-04704-3 [paper, repository]
Neural vulnerability to stress in adolescents: a longitudinal study using polyconnectomic scoring of depression risk.
Journal: BMC medicine
Authors' code: dutchconnectomelab/pcs-toolbox (other)
Status: code verified, 7 files readable
[331] doi:10.1038/s41467-025-66539-5 [paper, repository]
Global remapping of the sensory homunculus emerges early in childhood development.
Journal: Nature communications
Status: code verified
[332] doi:10.1038/s41467-026-68968-2 [paper, repository]
Bifidobacterium longum and prebiotic interventions restore early-life high-fat/high-sugar diet-induced alterations in feeding behavior in adult mice.
Journal: Nature communications
Authors' code: cristinacuesta-marti/earlylifehfhs_feeding_microbiota_2025 (no license), thomazbastiaanssen/Tjazi (GPL-3.0), Zenodo 17831151 (CC-BY-4.0)
Status: code verified, 25 files readable, 5 matches

Monday, 23 February 2026 (2 papers)

[333] doi:10.1038/s41467-026-69657-w [paper, repository]
Normative growth trajectories of fetal brain regions validated by satisfactory maturation of neurodevelopmental domains at 2 years of age.
Journal: Nature communications
Status: code verified
[334] doi:10.1016/j.neuroimage.2026.121829 [paper, repository]
Connectome-based prediction of problematic use of social media in adolescents: Findings from the ABCD study.
Journal: NeuroImage
Authors' code: YaleMRRC/CPM (no license)
Status: code verified, 41 files readable, 2 matches

Sunday, 22 February 2026 (1 paper)

[335] doi:10.1038/s41467-026-69697-2 [paper, repository]
Subtypes of adolescent major depressive disorder characterized by divergent information dynamics in sensory-association cortices.
Journal: Nature communications
Status: code verified, 17 files readable, 4 matches

Friday, 20 February 2026 (2 papers)

[336] doi:10.1038/s41598-026-40336-6 [paper, data]
Neonatal brain age estimation from T2-weighted magnetic resonance images using shallow regression analysis.
Journal: Scientific reports
Status: data only, 1 dataset cited
[337] doi:10.64898/2026.02.20.706969 [paper, repository]
From Variability to Synchrony: Non-linear Development of Auditory Neural Responses During the First Year of Life
Journal: bioRxiv (preprint)
Authors' code: evareisenberger/InfantEEGAnalysis (no license)
Status: dead link

Thursday, 19 February 2026 (5 papers)

[338] doi:10.26508/lsa.202503419 [paper, data]
Natural variations in maternal behavior shape anxiety and hippocampal neurogenesis in offspring.
Journal: Life science alliance
Status: data only, 1 dataset cited
[339] doi:10.1038/s41467-026-69774-6 [paper, repository]
Deviation in development of dorsal association tracts during preadolescence links to concurrent and future cognitive performance and transdiagnostic psychopathology.
Journal: Nature communications
Authors' code: jfortin1/combatharmonization (no license), garedaba/brainAges (no license), cedricx/scca (no license), murraylab/brainsmash (GPL-3.0), frantisekvasa/rotate_parcellation (MIT), hub.docker.com/r/dsistudio (no license)
Status: code verified, 112 files readable, 5 matches
[340] doi:10.1038/s42003-026-09627-6 [paper, repository]
Decreased thickness of the individually-mapped genital cortex after childhood sexual abuse exposure in adult women.
Journal: Communications biology
Authors' code: OSF qwefs (no license)
Status: code verified, 16 files readable, 7 matches
[341] doi:10.1186/s13034-026-01030-7 [paper, repository]
Understanding the developmental trajectory of behavioral problems and subcortical structure morphometry in healthy children at 6 years old and long-term impact of early nutrition: the COGNIS study.
Journal: Child and adolescent psychiatry and mental health
Authors' code: surfer.nmr.mgh.harvard.edu (no license), alhambra.ugr.es (no license)
Status: code verified
[342] doi:10.1186/s13293-026-00854-4 [paper, data]
Sex chromosome-dependent epigenetic regulation underlies sex-specific H4 acetylation at the aromatase promoter in the developing mouse amygdala.
Journal: Biology of sex differences
Status: data only, 1 dataset cited

Tuesday, 17 February 2026 (1 paper)

[343] doi:10.1038/s44319-026-00719-2 [paper]
Mechanical impact on neural stem cell lineage decisions in human brain organoids.
Journal: EMBO reports
Status: data only

Monday, 16 February 2026 (4 papers)

[344] doi:10.1159/000550957 [paper, data]
Modest Neurodevelopment Impacts of <italic>APOE4</italic> in a Human Brain Organoid Model of Low-Grade SARS-CoV-2 Infection.
Journal: Developmental neuroscience
Status: data only, 1 dataset cited
[345] doi:10.1159/000551055 [paper, data]
Neurological Outcomes beyond Epilepsy following Electroencephalographically Verified Neonatal Seizures: A Swedish Nationwide Cohort Study.
Journal: Neuroepidemiology
Status: data only, 1 dataset cited
[346] doi:10.1111/dmcn.70209 [paper, repository]
Collaborative practice to support community-based physical activity for young people with childhood-onset physical disability: A scoping review.
Journal: Developmental medicine and child neurology
Authors' code: OSF bpgz3 (no license)
Status: empty repository
[347] doi:10.1016/j.jad.2026.121380 [paper, repository]
Reduced amygdala habituation to anticipated social rejection in youth with major depressive disorder.
Journal: Journal of affective disorders
Authors' code: OSF f2nx8 (no license)
Status: code verified, 2 files readable, 2 matches

Saturday, 14 February 2026 (3 papers)

[348] doi:10.1038/s41398-026-03906-w [paper, repository]
Brain network features predating early alcohol initiation in adolescence.
Journal: Translational psychiatry
Status: empty repository, 2 files readable
[349] doi:10.1016/j.dcn.2026.101697 [paper, repository]
MRI-based structural development of the human newborn hypothalamus.
Journal: Developmental cognitive neuroscience
Authors' code: jerodras/neonate_hypothalamus_seg (GPL-3.0)
Status: code verified, 5 files readable, 1 match
[350] doi:10.1016/j.isci.2026.114997 [paper, repository]
Exploring roles of neuroglobin in oxygen homeostasis and neurodevelopment based on human cerebral organoid models.
Journal: iScience
Authors' code: antibodyregistry.org/gse293664 (no license)
Status: code verified

Friday, 13 February 2026 (2 papers)

[351] doi:10.1016/j.nicl.2026.103965 [paper, repository]
Functional network organization is locally atypical in children, adolescents, and young adults with congenital heart disease.
Journal: NeuroImage. Clinical
Status: code verified, 5 files readable, 3 matches
[352] doi:10.3389/fnhum.2026.1729276 [paper, repository]
Long-term associations between perinatal factors and white matter microstructure at 8-10 years.
Journal: Frontiers in human neuroscience
Authors' code: NIRALUser/DTIPlayground (MIT)
Status: code verified, 139 files readable, 2 matches

Thursday, 12 February 2026 (3 papers)

[353] doi:10.1242/jeb.250914 [paper, data]
Deficiency of vital organic nutrients in ecosystems limits brain development and fitness in wild fish.
Journal: The Journal of experimental biology
Status: data only, 1 dataset cited
[354] doi:10.1172/jci197271 [paper, repository]
Alternative splicing-triggered mRNA decay informs splice-switching targets for neurodevelopmental disorders.
Journal: The Journal of clinical investigation
Authors' code: dontkme/EANMD (MIT), codeocean:3402124 (no license)
Status: code verified, 28 files readable, 11 matches
[355] doi:10.1038/s42003-026-09622-x [paper, repository]
Microstructural variation of hippocampal substructures across childhood and adolescence quantified with high-gradient diffusion MRI.
Journal: Communications biology
Authors' code: OSF 4aqxr (no license)
Status: code verified, 9 files readable, 2 matches

Tuesday, 10 February 2026 (3 papers)

[356] doi:10.1186/s13293-026-00846-4 [paper, repository]
Predicting developmental norms from baseline cortical thickness in longitudinal studies.
Journal: Biology of sex differences
Authors' code: abcdstudy.org (no license), PhilippS893/b-norm_modelling (no license)
Status: code verified, 12 files readable, 10 matches
[357] doi:10.1111/jsr.70309 [paper, repository]
An Electroencephalographic Study of Sleep Spindle and Infraslow Oscillation in Children With Autism Spectrum Disorder.
Journal: Journal of sleep research
Status: code verified, 22 files readable, 15 matches
[358] doi:10.1016/j.celrep.2026.116969 [paper]
Ploidy and neuron size impact nervous system development and function in Xenopus.
Journal: Cell reports
Status: code on request

Monday, 9 February 2026 (2 papers)

[359] doi:10.21203/rs.3.rs-8592737/v1 [paper, data]
The genetic risk of mental health disorders in children from diverse population-based cohorts is modulated by poverty
Journal: Research Square (preprint)
Status: data only, 1 dataset cited
[360] doi:10.1016/j.isci.2026.114968 [paper, repository]
Early-life microbiota disruption-induced deficits in the social brain are sensitive to diet.
Journal: iScience
Authors' code: picrust/picrust2 (GPL-3.0), thomazbastiaanssen/Tjazi (GPL-3.0)
Status: code verified, 62 files readable, 4 matches

Saturday, 7 February 2026 (1 paper)

[361] doi:10.1016/j.isci.2026.114957 [paper]
Oropouche virus infects human neural progenitor cells and alters the growth of brain organoids.
Journal: iScience
Status: code on request

Friday, 6 February 2026 (2 papers)

[362] doi:10.1038/s41398-026-03881-2 [paper]
Differential associations of childhood abuse and neglect with neural responses to social reward and punishment in adults with anxiety or depression.
Journal: Translational psychiatry
Status: code on request
[363] doi:10.1038/s41467-026-69240-3 [paper, data]
Inhibition of stress resilience and adult hippocampal neurogenesis by platelet-derived LPA16:0 in anxiety.
Journal: Nature communications
Status: data only, 2 datasets cited

Thursday, 5 February 2026 (3 papers)

[364] doi:10.1038/s41467-026-68948-6 [paper, repository]
Divergent representation and processing of task cues in sensory and prefrontal cortices of preterm-born mice.
Journal: Nature communications
Authors' code: ced.co.uk/downloads/scriptspkexpr (no license)
Status: code verified
[365] doi:10.1186/s13148-026-02061-9 [paper, data]
Multi-tissue DNA methylation analysis to identify an appropriate surrogate tissue for a unique neurological tissue specific to spina bifida.
Journal: Clinical epigenetics
Status: data only, 1 dataset cited
[366] doi:10.3390/ijms27031556 [paper, data]
Paternal Deprivation Alters Neural Stem Cells Proliferation and Epigenetic Histone Modifications in the Neurogenic Niches of Adult Prairie Voles.
Journal: International journal of molecular sciences
Status: data only, 1 dataset cited

Wednesday, 4 February 2026 (4 papers)

[367] doi:10.1126/sciadv.adz6827 [paper, data]
Oriented cell divisions induce basal progenitors and regulate neural expansion across tissues and species.
Journal: Science advances
Status: data only, 1 dataset cited
[368] doi:10.34133/research.1115 [paper, repository]
Heterogeneity-Aware, Multiscale Annotation of Shared and Specific Neurobiological Signatures among Major Neurodevelopmental Disorders.
Journal: Research (Washington, D.C.)
Authors' code: juryxy/juspace (no license), UMDataScienceLab/hmf (no license), Yunheng-Diao/code (no license)
Status: code verified, 37 files readable, 7 matches
[369] doi:10.1016/j.dcn.2026.101688 [paper, repository]
Unpredictable caregiving is associated with disrupted neurophysiological measures of attention and autonomic function in three-month-old infants.
Journal: Developmental cognitive neuroscience
Authors' code: contecenter.uci.edu/shared-resources (no license)
Status: code verified
[370] doi:10.3389/fpsyt.2026.1732661 [paper, repository]
Childhood chronic stress associated with abnormal brain white matter networks in first-episode, drug-naïve MDD adolescents: a machine learning study.
Journal: Frontiers in psychiatry
Authors' code: pnlbwh/pnlNipype (other)
Status: code verified, 28 files readable, 3 matches

Monday, 2 February 2026 (2 papers)

[371] doi:10.1073/pnas.2514979123 [paper, repository]
Early psychosocial deprivation alters the refinement of neural dynamics across adolescence.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: canlab/MediationToolbox (no license), Zenodo 18232100 (CC-BY-4.0)
Status: code verified, 235 files readable, 1 match
[372] doi:10.1038/s41593-025-02187-8 [paper, repository]
Infants have rich visual categories in ventrotemporal cortex at 2 months of age.
Journal: Nature neuroscience
Authors' code: ClionaOD/foundcog_paradigm (BSD-3-Clause), ClionaOD/foundcog_analysis (BSD-3-Clause)
Status: code verified, 20 files readable, 10 matches

Sunday, 1 February 2026 (7 papers)

[373] doi:10.1093/brain/awaf259 [paper, repository]
Associations between epilepsy-related polygenic risk and brain morphology in childhood.
Journal: Brain : a journal of neurology
Authors' code: hub.docker.com/r/eauforest (no license), MICA-MNI/ENIGMA (BSD-3-Clause)
Status: code verified, 119 files readable, 9 matches
[374] doi:10.1182/bloodadvances.2025017172 [paper, repository]
Regional brain age is decreased in children with sickle cell anemia.
Journal: Blood advances
Authors' code: vishnubashyam/DeepBrainNet (no license)
Status: code verified, 4 files readable
[375] doi:10.1002/hbm.70451 [paper, repository]
Pubertal Hormones and the Early Adolescent Female Brain: A Multimodality Brain MRI Study.
Journal: Human brain mapping
Authors' code: owensmax/ADHD (no license)
Status: code verified, 10 files readable, 1 match
[376] doi:10.1002/brb3.71195 [paper, repository]
Probing the Influence of Paternal Diet on Offspring Neuroanatomy With Mouse MRI.
Journal: Brain and behavior
Authors' code: mouse-imaging-centre.github.io/rminc (no license)
Status: code verified
[377] doi:10.1002/hbm.70458 [paper, repository]
A Systematic Evaluation of the Performance of Multiple Brain Age Algorithms in Two Cohorts of Youth.
Journal: Human brain mapping
Status: code verified, 85 files readable, 1 match
[378] doi:10.1016/j.biopsych.2026.01.014 [paper, data]
Loss of Zmiz1 in Mice Leads to Impaired Cortical Development and Autistic-Like Behaviors.
Journal: Biological psychiatry
Status: data only, 1 dataset cited
[379] doi:10.3390/s26030938 [paper, data]
Neonatal Seizure Detection Based on Spatiotemporal Feature Decoupling and Domain-Adversarial Learning.
Journal: Sensors (Basel, Switzerland)
Status: data only, 1 dataset cited

Saturday, 31 January 2026 (1 paper)

[380] doi:10.64898/2026.01.30.702841 [paper, repository]
Topographical differences during motion processing in autistic and dyslexic children
Journal: bioRxiv (preprint)
Authors' code: OSF wmtpx (no license)
Status: code verified, 18 files readable, 4 matches

Friday, 30 January 2026 (2 papers)

[381] doi:10.21203/rs.3.rs-8414265/v1 [paper, repository]
Neural and behavioral reward responsiveness in early adolescence: longitudinal associations with childhood adversity and resilience
Journal: Research Square (preprint)
Authors' code: r-j-shepherd/ELA_resilience_reward (no license)
Status: dead link
[382] doi:10.1371/journal.pcbi.1013931 [paper, repository]
Capturing individual variation in children's electroencephalograms during nREM sleep.
Journal: PLoS computational biology
Authors' code: vernaverna/FABEEG (MIT)
Status: code verified, 59 files readable, 12 matches

Thursday, 29 January 2026 (2 papers)

[383] doi:10.1038/s41467-026-68647-2 [paper, data]
NR6A1 is essential for neural crest cell specification, formation and survival.
Journal: Nature communications
Status: data only, 1 dataset cited
[384] doi:10.3389/fnmol.2026.1693722 [paper, repository]
Transcriptional and neurotransmitter signatures associated with regional gray matter alterations in juvenile myoclonic epilepsy.
Journal: Frontiers in molecular neuroscience
Authors' code: murraylab/brainsmash (GPL-3.0), juryxy/JuSpace (no license)
Status: code verified, 41 files readable, 5 matches

Wednesday, 28 January 2026 (3 papers)

[385] doi:10.1017/s0033291726103201 [paper, repository]
Genome-wide investigation highlights global and local pleiotropy linking neurodevelopmental disorders to acquired hearing problems.
Journal: Psychological medicine
Authors' code: bulik/ldsc (GPL-3.0), precimed/mixer (GPL-3.0), josefin-werme/LAVA (no license), UMCUGenetics/PolarMorphism (MIT), precimed/gsa-mixer (GPL-3.0), josefin-werme (no license)
Status: code verified, 170 files readable, 2 matches
[386] doi:10.1038/s41598-026-36750-5 [paper, data]
Inter-neural co-regulation before and after an interactive perturbation in mother-infant dyads.
Journal: Scientific reports
Status: data only, 1 dataset cited
[387] doi:10.1038/s41598-026-37037-5 [paper, repository]
Maternal technoference decreases brain-to-brain synchrony during mother-infant interaction.
Journal: Scientific reports
Authors' code: m-agat/mother_infant_neural_synchrony (no license)
Status: code verified, 8 files readable, 5 matches

Tuesday, 27 January 2026 (1 paper)

[388] doi:10.1162/imag.a.1112 [paper, repository]
Functional fingerprinting for the developing brain using deep metric learning.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: CAIMI-WEIGroup/MetricBolT (no license)
Status: code verified, 22 files readable, 3 matches

Monday, 26 January 2026 (2 papers)

[389] doi:10.1007/s10571-026-01673-2 [paper]
Intermittent Propofol Exposure Induces Neurodevelopmental Alterations in Human Brain Organoids.
Journal: Cellular and molecular neurobiology
Status: data only
[390] doi:10.3390/biology15030231 [paper, data]
DNA Methylation Landscape of ReNcell Common Neural Progenitor Cell Lines Reveals Distinct Lineage Bias.
Journal: Biology
Status: data only, 1 dataset cited

Friday, 23 January 2026 (4 papers)

[391] doi:10.1038/s42003-025-09488-5 [paper, repository]
Aperiodic parameters of the fMRI power spectrum associate with preterm birth and neonatal age.
Journal: Communications biology
Authors' code: ilksuu/fmri_aperiodic_parameters_age_prediction (MIT), Zenodo 17903944 (MIT)
Status: code verified, 6 files readable, 4 matches
[392] doi:10.1038/s41467-026-68714-8 [paper, repository]
Two axes of white matter development.
Journal: Nature communications
Authors' code: tractometry/pyafq (BSD-2-Clause), frantisekvasa/rotate_parcellation (MIT), PennLINC/luo_wm_dev (no license), pennlinc.github.io/luo_wm_dev (no license), Zenodo 18332410 (CC-BY-4.0)
Status: code verified, 387 files readable, 27 matches
[393] doi:10.1038/s41467-026-68707-7 [paper, repository]
Spatial heterogeneity and subtypes of functional connectivity development in youth.
Journal: Nature communications
Authors' code: MLDataAnalytics/FC-SpatialHeterogeneity (MIT), Zenodo 17805407 (CC-BY-4.0), hmlicas/fc-spatialheterogeneity (MIT)
Status: code verified, 57 files readable, 7 matches
[394] doi:10.3390/ijms27031140 [paper]
Potential Link Between a Disruptive <i>CAPN6</i> Variant and Neurodevelopmental Disorders.
Journal: International journal of molecular sciences
Status: data only

Thursday, 22 January 2026 (3 papers)

[395] doi:10.1038/s41467-026-68704-w [paper, repository]
Hierarchical maturation of structural brain connectomes from birth to childhood.
Journal: Nature communications
Authors' code: tengdazhao/Hierarchical-maturation-WM-connectomes-0-to-8-yrs (GPL-3.0), iBEAT-V2/iBEAT-V2.0-Docker (no license), Zenodo 18039533 (GPL-3.0)
Status: code verified, 71 files readable, 5 matches
[396] doi:10.1038/s41467-026-68459-4 [paper, data]
Neural crest cell-derived DKK1 and NEDD4 modulate Wnt signalling in the second heart field to orchestrate outflow tract development.
Journal: Nature communications
Status: data only, 1 dataset cited
[397] doi:10.1186/s12967-025-07631-8 [paper]
Fecal microbiota transplantation promotes Wnt3a-mediated hippocampal neurogenesis in a rat model of chronic cerebral hypoperfusion.
Journal: Journal of translational medicine
Status: data only

Wednesday, 21 January 2026 (2 papers)

[398] doi:10.1016/j.ajhg.2025.12.015 [paper]
MDGA2 homozygous loss-of-function variants cause developmental and epileptic encephalopathy.
Journal: American journal of human genetics
Status: code on request
[399] doi:10.1016/j.dcn.2026.101681 [paper, repository]
Age and gender-related neurophysiological changes in sleep and wake states during childhood.
Journal: Developmental cognitive neuroscience
Authors' code: raphaelvallat/yasa (BSD-3-Clause)
Status: code verified, 51 files readable, 3 matches

Tuesday, 20 January 2026 (3 papers)

[400] doi:10.1073/pnas.2511800123 [paper, repository]
Differential <i>Hes1</i> activation defines neural stem cell lineage commitment and niche maintenance in embryonic and adult mouse cortex.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: ncbi.nlm.nih.gov/traces/study (no license), Zenodo 15308921 (CC-BY-4.0), Zenodo 17176557 (CC-BY-4.0)
Status: code verified, 22 files readable, 8 matches
[401] doi:10.1038/s41467-026-68483-4 [paper, repository]
Cryo-electron tomography reveals coupled flavivirus replication, budding and maturation.
Journal: Nature communications
Authors' code: grotjahnlab/surface_morphometrics (GPL-3.0)
Status: code verified, 86 files readable, 2 matches
[402] doi:10.1117/1.nph.13.s1.s13007 [paper, repository]
Cross-paradigm fNIRS brain activity in 1-month-old infants across The Gambia and the United Kingdom.
Journal: Neurophotonics
Authors' code: globalfnirs (no license)
Status: code verified

Monday, 19 January 2026 (1 paper)

[403] doi:10.1159/000550513 [paper, data]
Prediction of Retinopathy of Prematurity and Treatment in Very Low Birth Weight Infants Using Machine Learning on Nationwide Non-Imaging Clinical Data.
Journal: Neonatology
Status: data only, 1 dataset cited

Saturday, 17 January 2026 (1 paper)

[404] doi:10.1016/j.bpj.2026.01.026 [paper]
DNA-PAINT resolves E-cadherin-independent cross-junctional F-actin organization in Drosophila embryonic tissue.
Journal: Biophysical journal
Status: code on request

Friday, 16 January 2026 (5 papers)

[405] doi:10.1038/s42003-026-09536-8 [paper, repository]
How do infant brains fold? Sulcal deepening is linked to development of sulcal span, thickness, curvature, and microstructure.
Journal: Communications biology
Authors' code: Zenodo 17971447 (GPL-3.0), VPNL/infants_sulcalmorphology (GPL-3.0)
Status: code verified, 30 files readable, 8 matches
[406] doi:10.1038/s42003-026-09549-3 [paper, repository]
Deciphering multiway multiscale brain network connectivity from birth to 6 months.
Journal: Communications biology
Authors' code: trendscenter/gift (no license)
Status: code verified, 1,047 files readable, 6 matches
[407] doi:10.1186/s12940-025-01254-8 [paper, data]
Associations of arsenic exposure and folate in maternal leukocyte DNA methylation: a case-control study of mothers with spina-bifida affected children.
Journal: Environmental health : a global access science source
Status: data only, 2 datasets cited
[408] doi:10.1016/j.media.2026.103941 [paper, repository]
Advances in automated fetal brain MRI segmentation and biometry: Insights from the FeTA 2024 challenge.
Journal: Medical image analysis
Authors' code: smilell/topology-evaluation (no license), fetachallenge/fetachallengesubmission (GPL-3.0), fetachallenge.github.io/pages (no license), hub.docker.com/r/fetachallenge22 (no license), hub.docker.com/u/fetachallenge2024 (no license), Zenodo 15696638 (CC-BY-4.0)
Status: code verified, 7 files readable, 4 matches
[409] doi:10.1016/j.nicl.2026.103949 [paper, data]
Spatiotemporal brain dynamics in 8-to-9-year-old children: A comparative study between preterm and term schoolchildren.
Journal: NeuroImage. Clinical
Status: data only, 1 dataset cited

Thursday, 15 January 2026 (1 paper)

[410] doi:10.1038/s41598-025-33981-w [paper, repository]
Mapping brain growth and sex differences across prenatal to postnatal development.
Journal: Scientific reports
Authors' code: BioMedIA/dhcp-structural-pipeline (Apache-2.0), mirtk/drawem (Apache-2.0)
Status: code verified, 1,315 files readable, 3 matches

Tuesday, 13 January 2026 (1 paper)

[411] doi:10.1038/s41467-025-66729-1 [paper, repository]
Affiliative behaviours regulate allostasis development and shape biobehavioural trajectories in horses.
Journal: Nature communications
Status: code verified, 31 files readable, 10 matches

Monday, 12 January 2026 (1 paper)

[412] doi:10.1371/journal.ppat.1013850 [paper, data]
Inapparent maternal ZIKV infection impacts fetal brain development and postnatal behavior.
Journal: PLoS pathogens
Status: data only, 1 dataset cited

Saturday, 10 January 2026 (2 papers)

[413] doi:10.1002/anie.202520854 [paper, repository]
A Novel Acetylcholine Nanosensor for Single Vesicle Storage and Sub-Quantal Exocytosis in Living Neurons and Organoids.
Journal: Angewandte Chemie (International ed. in English)
Authors' code: Zenodo 15279592 (CC-BY-4.0)
Status: code verified, 3 files readable
[414] doi:10.1038/s41467-025-67754-w [paper, repository]
Developmental variations in recurrent spatiotemporal brain propagations from childhood to adulthood.
Journal: Nature communications
Authors' code: thomasyeolab/cbig (MIT), tsb46/complex_pca (MIT), humanbrained/neurodev-cpca (no license)
Status: code verified, 2,011 files readable, 7 matches

Friday, 9 January 2026 (2 papers)

[415] doi:10.1016/j.xhgg.2026.100563 [paper, data]
EEFSEC deficiency underlies a human selenopathy with primary neurodevelopmental origins via midbrain-hindbrain hypoplasia.
Journal: HGG advances
Status: data only, 3 datasets cited
[416] doi:10.3390/ijms27020679 [paper, repository]
Fetal Neuronal Vesicles in the Assessment of Perinatal Brain Dysfunction and Late-Onset Growth Restriction: A Pilot Study.
Journal: International journal of molecular sciences
Authors' code: r-project.org (no license)
Status: code verified

Thursday, 8 January 2026 (2 papers)

[417] doi:10.1016/j.xhgg.2026.100565 [paper]
Recessive AARS1 variants perturb human and mouse development.
Journal: HGG advances
Status: code on request
[418] doi:10.1016/j.dcn.2026.101670 [paper, repository]
Developmental organization of neural dynamics supporting social processing: Evidence from naturalistic fMRI in children and adults.
Journal: Developmental cognitive neuroscience
Status: empty repository, 1 file readable

Monday, 5 January 2026 (2 papers)

[419] doi:10.1073/pnas.2426232122 [paper, repository]
Primate gut microbiota induce evolutionarily salient changes in mouse neurodevelopment.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: code verified, 19 files readable, 20 matches
[420] doi:10.1073/pnas.2513598123 [paper, data]
Income insufficiency impacts early brain development in infants facing increased psychosocial adversity: A network-based approach.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited

Friday, 2 January 2026 (1 paper)

[421] doi:10.1073/pnas.2528095123 [paper, data]
Dietary folic acid prevents peripheral neuropathy in mouse models of neural tube defects and type 2 diabetes.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited

Thursday, 1 January 2026 (15 papers)

[422] doi:10.1002/dneu.70000 [paper, data]
Adolescent White Matter Maturation Mediates Epigenetic Associations With Cognitive Development.
Journal: Developmental neurobiology
Status: data only, 1 dataset cited
[423] doi:10.1002/dev.70114 [paper, data]
The Developmental Approach to Autism Science: Considering Cognitive Ability in the Age of Neuroimaging Research.
Journal: Developmental psychobiology
Status: data only, 1 dataset cited
[424] doi:10.1002/dneu.70007 [paper, repository]
Parallel Morphological and Functional Development in the Xenopus Retinotectal System.
Journal: Developmental neurobiology
Authors' code: figshare 267521 (CC-BY-4.0), RuthazerLab/XenMorphFunc (no license)
Status: code verified, 7 files readable, 4 matches
[425] doi:10.1242/dev.204631 [paper, data]
The Sh3Pxd2bnee-/- mouse reveals developmental features of Frank-ter Haar syndrome.
Journal: Development (Cambridge, England)
Status: data only, 1 dataset cited
[426] doi:10.1093/gigascience/giag003 [paper, repository]
A preregistered, open pipeline for early cerebral palsy risk assessment from infant videos.
Journal: GigaScience
Authors' code: KordingLab/predict-scores-from-video (MIT), OSF sd6fa (no license), KordingLab/Infant_movement_assessment (no license), Zenodo 18039385 (MIT), quietscientist/score_prediction_from_video (MIT)
Status: code verified, 107 files readable, 10 matches
[427] doi:10.1093/scan/nsag005 [paper, repository]
Social 'envirotyping' the ABCD study contextualizes dissociable brain organization and diverging outcomes.
Journal: Social cognitive and affective neuroscience
Authors' code: h-merritt/envirotypes (no license)
Status: code verified, 4 files readable, 4 matches
[428] doi:10.1111/infa.70076 [paper, repository]
Emergence of Neural Face Selectivity in Infants Younger Than 4 Months Old.
Journal: Infancy : the official journal of the International Society on Infant Studies
Authors' code: OSF uwhc7 (no license)
Status: empty repository
[429] doi:10.1093/ismejo/wrag074 [paper, data]
Fecal microbiota transplantation and Akkermansia muciniphila restore neurodevelopment and behavior via the gut-brain axis in autism-like zebrafish.
Journal: The ISME journal
Status: data only, 1 dataset cited
[430] doi:10.1117/1.nph.13.s1.s13008 [paper, repository]
Task-free functional connectivity changes before and after hyper- and hypoglycemia in very preterm neonates.
Journal: Neurophotonics
Authors' code: sbrigadoi/BabyGlucoLight (no license)
Status: code verified, 131 files readable, 12 matches
[431] doi:10.1117/1.nph.13.s1.s13012 [paper, data]
Shape of the hemodynamic response function in deaf infants eligible for cochlear implantation.
Journal: Neurophotonics
Status: data only, 1 dataset cited
[432] doi:10.1117/1.nph.13.s1.s13013 [paper, repository]
Effect of sleep stage on patterns of fNIRS hemodynamic response to auditory paradigms in 1-month-old Gambian and UK infants.
Journal: Neurophotonics
Authors' code: globalfnirs (no license)
Status: code verified
[433] doi:10.1093/scan/nsag053 [paper, data]
Safety-relevant experience reshapes neural codes for ambiguous threat in adolescents.
Journal: Social cognitive and affective neuroscience
Status: data only, 1 dataset cited
[434] doi:10.1117/1.nph.13.s1.s13014 [paper, repository]
Poverty and caregiver mental health are related to infant and toddler resting-state brain networks: insights from fNIRS.
Journal: Neurophotonics
Authors' code: OSF 9yn84 (no license)
Status: code found, still to be checked
[435] doi:10.1093/scan/nsag073 [paper, data]
Selective attenuation of neural responses to own infant's face in early motherhood: a longitudinal magnetoencephalography study.
Journal: Social cognitive and affective neuroscience
Status: data only, 1 dataset cited
[436] doi:10.1093/scan/nsag071 [paper, repository]
Neural bias to social feedback moderates link between childhood abuse and subsequent harsh parenting.
Journal: Social cognitive and affective neuroscience
Authors' code: OSF 2efkn (no license)
Status: empty repository

Wednesday, 31 December 2025 (1 paper)

[437] doi:10.1038/s41467-025-67785-3 [paper]
Connectivity of the adult human brain with sequential neurogenesis of circuits and transcriptomics signatures.
Journal: Nature communications
Status: code on request

Tuesday, 30 December 2025 (4 papers)

[438] doi:10.1371/journal.pone.0330915 [paper, data]
Perinatal Imaging in Partnership with Families (PIPKIN): Longitudinal cohort study protocol.
Journal: PloS one
Status: data only, 1 dataset cited
[439] doi:10.1038/s41593-025-02146-3 [paper, repository]
An open science resource for accelerating scalable digital health research in autism and other neurodevelopmental conditions.
Journal: Nature neuroscience
Authors' code: Dinstein-Lab/SSP_manuscript (no license)
Status: code verified, 11 files readable, 3 matches
[440] doi:10.1016/j.dcn.2025.101666 [paper, data]
The association between longitudinal changes in inter-hemispheric IPS functional connectivity and math gains depends on children's age and task requirements.
Journal: Developmental cognitive neuroscience
Status: data only, 1 dataset cited
[441] doi:10.3390/genes17010035 [paper]
Embryonic Thermal Manipulation Affects Neurodevelopment and Induces Heat Tolerance in Layers.
Journal: Genes
Status: data only

Monday, 29 December 2025 (4 papers)

[442] doi:10.7554/elife.107138 [paper, repository]
Morphogenesis and morphometry of brain folding patterns across species.
Journal: eLife
Status: code verified, 36 files readable, 8 matches
[443] doi:10.1038/s41593-025-02107-w [paper, repository]
Fractal analysis of brain shape formation predicts age and genetic similarity in human newborns.
Journal: Nature neuroscience
Authors' code: cMadan/prism (BSD-2-Clause), OSF 6jck4 (no license)
Status: code verified, 20 files readable, 7 matches
[444] doi:10.1016/j.ajhg.2025.12.004 [paper, repository]
De novo variants in KDM2A cause a syndromic neurodevelopmental disorder.
Journal: American journal of human genetics
Status: empty repository, 1 file readable
[445] doi:10.55730/1300-0152.2791 [paper, data]
Transcriptomic identification and developmental mapping of <i>nrg3b</i> expression in zebrafish.
Journal: Turkish journal of biology = Turk biyoloji dergisi
Status: data only, 1 dataset cited

Friday, 26 December 2025 (1 paper)

[446] doi:10.1093/evlett/qraf050 [paper, repository]
Neural crest cell biology shapes lizard skull evolution across evolutionary time scales.
Journal: Evolution letters
Authors' code: Zenodo 15855204 (CC-BY-4.0)
Status: code verified

Thursday, 25 December 2025 (1 paper)

[447] doi:10.1016/j.nicl.2025.103938 [paper, repository]
Fetal functional connectivity prospectively associates with autistic traits in toddlerhood.
Journal: NeuroImage. Clinical
Authors' code: Zenodo 14051966 (CC-BY-4.0)
Status: code verified

Wednesday, 24 December 2025 (1 paper)

[448] doi:10.1038/s41598-025-33104-5 [paper, data]
Influence of ApoE genotype on doxorubicin-induced cognitive impairment in juvenile rats.
Journal: Scientific reports
Status: data only, 1 dataset cited

Tuesday, 23 December 2025 (1 paper)

[449] doi:10.1080/26941899.2025.2600125 [paper, repository]
A Bayesian Integrative Mixed Modeling Framework for Analysis of the Multi-Site Adolescent Brain and Cognitive Development Study.
Journal: Data science in science
Authors' code: nehera/abcd_multiview (MIT)
Status: code verified, 21 files readable, 9 matches

Monday, 22 December 2025 (2 papers)

[450] doi:10.1038/s41467-025-66784-8 [paper, repository]
Latent brain subtypes of chronotype reveal unique behavioral and health profiles across population cohorts.
Journal: Nature communications
Authors' code: MRCIEU/PHESANT (MIT), Zenodo 17524317 (MIT), zoro27/chronotype_subtype (MIT)
Status: code verified, 67 files readable, 11 matches
[451] doi:10.1038/s44321-025-00367-4 [paper, repository]
Impaired Complex I dysregulates neural/glial precursors and corpus callosum development revealing postnatal defects in Leigh syndrome mice.
Journal: EMBO molecular medicine
Authors' code: alexdobin/STAR (MIT), Zenodo 15424859 (CC-BY-4.0)
Status: code verified, 340 files readable, 6 matches

Sunday, 21 December 2025 (1 paper)

[452] doi:10.1038/s41467-025-67623-6 [paper, data]
Resolving forebrain developmental organisation by analysis of differential growth patterns.
Journal: Nature communications
Status: data only, 1 dataset cited

Friday, 19 December 2025 (2 papers)

[453] doi:10.1242/dev.205248 [paper, data]
Neural crest induction requires SALL4-mediated BAF recruitment to lineage specific enhancers.
Journal: Development (Cambridge, England)
Status: data only, 1 dataset cited
[454] doi:10.1002/jmri.70180 [paper, repository]
Developmental Brain Age Estimation From MRI Data: A Systematic Review of Deep Learning Approaches and Open Datasets.
Journal: Journal of magnetic resonance imaging : JMRI
Status: code verified, 557 files readable

Thursday, 18 December 2025 (3 papers)

[455] doi:10.1159/000550132 [paper, data]
Developmental Changes in the Expression of Lysophosphatidic Acid Receptor 4 in the Mouse Brain.
Journal: Developmental neuroscience
Status: data only, 1 dataset cited
[456] doi:10.1038/s41398-025-03791-9 [paper, repository]
Cortical markers of excitation/inhibition balance are associated with sensory responsivity from infancy in longitudinal cohorts enriched for autism and ADHD.
Journal: Translational psychiatry
Authors' code: OSF c6mq4 (no license), basis-network.org (no license)
Status: code verified, 1 file readable, 1 match
[457] doi:10.1016/j.bbi.2025.106225 [paper, repository]
Brain-immune correlates of quality of life in adolescents with chronic musculoskeletal pain.
Journal: Brain, behavior, and immunity
Authors' code: OSF rt389 (no license), neuroPENlab/publications (no license)
Status: code verified, 6 files readable, 6 matches

Wednesday, 17 December 2025 (2 papers)

[458] doi:10.1162/imag.a.1063 [paper, data]
Contrasting neonatal brain morphometry and its impact on neurodevelopmental outcome between preterm birth and congenital heart disease.
Journal: Imaging neuroscience (Cambridge, Mass.)
Status: code on request, 1 dataset cited
[459] doi:10.1093/braincomms/fcaf493 [paper, repository]
Subcortical correlates of developmental language disorder: more than the neostriatum.
Journal: Brain communications
Authors' code: qoala-t/qc (BSD-3-Clause), OSF wmkrq (no license)
Status: code verified, 21 files readable, 8 matches

Tuesday, 16 December 2025 (1 paper)

[460] doi:10.1038/s41556-025-01813-8 [paper, repository]
Modelling co-development between the somites and neural tube in human trunk-like structures.
Journal: Nature cell biology
Authors' code: zhirongbaolab/heoa (no license), immunogenomics/harmony (no license)
Status: code verified, 59 files readable, 5 matches

Monday, 15 December 2025 (2 papers)

[461] doi:10.1038/s41467-025-66108-w [paper, data]
Slc22a17 governs postnatal neurogenesis by maintaining the iron homeostasis in hippocampus.
Journal: Nature communications
Status: data only, 1 dataset cited
[462] doi:10.1111/jcpp.70096 [paper, repository]
Smartphone language and resting-state EEG indicators of self-focused attention prospectively predict major depressive disorder risk in adolescents.
Journal: Journal of child psychology and psychiatry, and allied disciplines
Authors' code: OSF tkrsf (no license)
Status: code verified, 1 file readable

Sunday, 14 December 2025 (1 paper)

[463] doi:10.1038/s41467-025-67542-6 [paper, data]
Dysregulated hippocampal fatty acid metabolism following intermittent hypoxemia-induced neonatal brain injury is rescued by treatment with acetate.
Journal: Nature communications
Status: data only, 1 dataset cited

Saturday, 13 December 2025 (1 paper)

[464] doi:10.1016/j.celrep.2025.116670 [paper, repository]
MeCP2 regulates telencephalic development in human cerebral organoids.
Journal: Cell reports
Authors' code: ncbi.nlm.nih.gov/geo/query (no license)
Status: code verified

Friday, 12 December 2025 (2 papers)

[465] doi:10.1186/s40168-025-02226-3 [paper, data]
Fetal programming by the parental microbiome of offspring behavior, and DNA methylation and gene expression within the hippocampus.
Journal: Microbiome
Status: data only, 1 dataset cited
[466] doi:10.1016/j.dcn.2025.101657 [paper, repository]
Pubertal timing and tempo differentially influence cortical and subcortical maturation in adolescence.
Journal: Developmental cognitive neuroscience
Authors' code: clarefmccann/abcd-pub-smri-publication (no license)
Status: code verified, 19 files readable

Thursday, 11 December 2025 (2 papers)

[467] doi:10.1038/s41467-025-66069-0 [paper, repository]
Syngap1 and the development of murine neocortical progenitor cells.
Journal: Nature communications
Authors' code: Zenodo 16914738 (CC-BY-4.0), vanniexu/syngap1 (no license)
Status: code verified, 6 files readable, 1 match
[468] doi:10.1038/s41593-025-02150-7 [paper, repository]
Single-cell spatiotemporal transcriptomic and chromatin accessibility profiling in developing postnatal human and macaque prefrontal cortex.
Journal: Nature neuroscience
Authors' code: Wu-lab-code-repository/PostnatalPFC (no license)
Status: code verified, 11 files readable, 18 matches

Wednesday, 10 December 2025 (1 paper)

[469] doi:10.1016/j.tjnut.2025.101267 [paper, data]
Maternal Sucrose Intake during Pregnancy Alone Disrupts Testosterone and Allopregnanolone Levels in the Fetal Brain of Rats.
Journal: The Journal of nutrition
Status: data only, 1 dataset cited

Monday, 8 December 2025 (1 paper)

[470] doi:10.1038/s44319-025-00653-9 [paper, data]
A low-level Cdkn1c/p57<sup>kip2</sup> expression in spinal progenitors drives the transition from proliferative to neurogenic modes of division.
Journal: EMBO reports
Status: data only, 2 datasets cited

Friday, 5 December 2025 (1 paper)

[471] doi:10.64898/2025.12.04.25341605 [paper, repository]
Epigenomic embedding of childhood adversity links to disease risk and chronic immune changes
Journal: medRxiv (preprint)
Authors' code: darinacz/contextual_meQTLs (no license)
Status: dead link

Thursday, 4 December 2025 (2 papers)

[472] doi:10.7554/elife.108331 [paper, repository]
Ptbp1 is not required for retinal neurogenesis and cell fate specification.
Journal: eLife
Authors' code: csanti88/ptbp1_2025 (MIT)
Status: code verified, 7 files readable, 6 matches
[473] doi:10.3389/fnbeh.2025.1673093 [paper, data]
Bright light exposure reduces negative affect and modulates EEG activity in sleep-deprived and well-rested adolescents.
Journal: Frontiers in behavioral neuroscience
Status: data only, 2 datasets cited

Wednesday, 3 December 2025 (3 papers)

[474] doi:10.1016/j.dcn.2025.101654 [paper, data]
Developmental differences in hippocampal long-axis contributions to memory precision.
Journal: Developmental cognitive neuroscience
Status: data only, 1 dataset cited
[475] doi:10.1162/imag.a.1041 [paper, repository]
Characterising the association between posterior parietal metabolite levels and cortical macrostructure in a cohort spanning childhood to adulthood.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: schorschinho/osprey (MIT)
Status: code verified, 487 files readable, 11 matches
[476] doi:10.1162/imag.a.1048 [paper, repository]
Comparison of brain normalization software and lesion compensation techniques in chronic perinatal stroke imaging.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: bchcohenlab/Perinatal_Stroke_Brain_Normalization (no license), Zenodo 3885143 (other-open), bchcohenlab/bids_lesion_code (MIT)
Status: code verified, 42 files readable, 4 matches

Tuesday, 2 December 2025 (5 papers)

[477] doi:10.7554/elife.100159 [paper, data]
<i>Eed</i> controls craniofacial osteoblast differentiation and mesenchymal proliferation from the neural crest.
Journal: eLife
Status: data only, 2 datasets cited
[478] doi:10.1038/s41467-025-66048-5 [paper, repository]
A spatial atlas of the complement system uncovers unique expression patterns in postnatal brain development in mice.
Journal: Nature communications
Authors' code: doi:10.5061/dryad.cnp5hqcbq (no license), ZhuangLab/MERFISH_analysis (other), Zenodo 17399249 (MIT)
Status: code verified, 91 files readable, 16 matches
[479] doi:10.1186/s13293-025-00792-7 [paper, data]
Sex-dimorphic reprogramming of fetal mouse brain development by maternal estradiol excess.
Journal: Biology of sex differences
Status: data only, 9 datasets cited
[480] doi:10.1002/acn3.70267 [paper]
Age-Related Characteristics of SYT1-Associated Neurodevelopmental Disorder.
Journal: Annals of clinical and translational neurology
Status: code on request
[481] doi:10.64898/2025.12.01.691172 [paper]
Neuronal excitability is permanently altered by activity manipulation during an embryonic critical period in <i>Drosophila</i>
Journal: bioRxiv (preprint)
Status: code on request

Monday, 1 December 2025 (6 papers)

[482] doi:10.1111/ede.70022 [paper, data]
Growth and Developmental Processes Alternate During Larval Development of Atlantic Herring.
Journal: Evolution & development
Status: data only, 1 dataset cited
[483] doi:10.1111/gbb.70042 [paper, data]
Shared Genetic Links Between Birth Weight and Developmental-Behavioral Disorders.
Journal: Genes, brain, and behavior
Status: data only, 1 dataset cited
[484] doi:10.1002/hbm.70422 [paper, repository]
High Resolution Postmortem MRI Discovers Developing Structural Connectivity in the Human Ascending Arousal Network.
Journal: Human brain mapping
Authors' code: lillazollei/HBM2025 (no license)
Status: dead link
[485] doi:10.1038/s41467-025-65631-0 [paper, repository]
Light-modulated stem cells in the camera-type eye of an annelid model for adult brain plasticity.
Journal: Nature communications
Authors' code: Zenodo 17349847 (CC-BY-4.0)
Status: code verified, 1 file readable, 5 matches
[486] doi:10.1038/s42003-025-09300-4 [paper, repository]
Dynamic structure-function coupling in macroscale neonatal brain networks.
Journal: Communications biology
Authors' code: zztute/Dynamic-SFC (no license)
Status: code verified, 32 files readable
[487] doi:10.1016/j.jaacop.2025.11.011 [paper, repository]
Developmental Pathways From Childhood Neurodevelopmental Traits to Early Adolescent Psychiatric Dimensions: The Role of Environmental and Lifestyle Factors.
Journal: JAACAP open
Authors' code: OSF yhkvm (no license)
Status: code verified, 2 files readable, 1 match

Thursday, 27 November 2025 (1 paper)

[488] doi:10.1038/s41467-025-65634-x [paper, data]
Mutations in the β-tubulin TUBB impair ciliogenesis and are associated with ciliopathy-like phenotypes.
Journal: Nature communications
Status: data only, 1 dataset cited

Tuesday, 25 November 2025 (1 paper)

[489] doi:10.1038/s41467-025-66766-w [paper, data]
1q gain bypasses the selective barrier against aneuploidy in RPE differentiation via wild-type co-culture rescue.
Journal: Nature communications
Status: data only, 1 dataset cited

Monday, 24 November 2025 (7 papers)

[490] doi:10.1038/s41398-025-03701-z [paper]
Parental high-fat/high-sugar diets and their lasting impact on brain development in offspring: a longitudinal mouse MRI study.
Journal: Translational psychiatry
Status: code on request
[491] doi:10.1038/s41398-025-03710-y [paper, repository]
Neurobehavioral pathways linking socioeconomic status hardship to suicide risk versus resilience in young adolescents: the roles of sleep health and default mode network connectivity.
Journal: Translational psychiatry
Authors' code: GeorgiaCenterforDevelopmentalScience (no license)
Status: code verified
[492] doi:10.1038/s41598-025-25361-1 [paper, data]
Neonatal seizure detection from EEG using inception ResNetV2 feature extraction and XGBoost optimized with particle swarm optimization.
Journal: Scientific reports
Status: data only, 1 dataset cited
[493] doi:10.1038/s41598-025-25482-7 [paper, repository]
Decoding brain age predictions from sleep electroencephalography across infancy to adolescence.
Journal: Scientific reports
Authors' code: brain-modelling-group/functional-brain-age (no license)
Status: code verified, 30 files readable, 6 matches
[494] doi:10.1038/s42003-025-08970-4 [paper, repository]
The effective connectome over a century of human life.
Journal: Communications biology
Authors' code: translationalneuromodeling.org/tapas (no license)
Status: code verified
[495] doi:10.1016/j.xpro.2025.104226 [paper, repository]
Protocol to analyze changes in hippocampal neural stem cell quiescence from single-cell RNA sequencing data.
Journal: STAR protocols
Authors' code: Zenodo 17255383 (CC-BY-4.0)
Status: code verified, 6 files readable, 18 matches
[496] doi:10.3389/fnhum.2025.1688296 [paper, repository]
Structural connectome gradients and their relationship to IQ in childhood.
Journal: Frontiers in human neuroscience
Authors' code: yoonmihong/SCgradients (no license)
Status: code verified, 6 files readable, 4 matches

Saturday, 22 November 2025 (2 papers)

[497] doi:10.1038/s41598-025-26835-y [paper, repository]
Dynamic graph-based quantum feature selection for accurate fetal plane classification in ultrasound imaging.
Journal: Scientific reports
Authors' code: priyadharshni-code/(DG-QFS) (no license)
Status: dead link
[498] doi:10.3390/brainsci15121256 [paper]
Fractal Analysis of Brain Activity During Risky Drinking in Adolescents and Young Adults.
Journal: Brain sciences
Status: code on request

Friday, 21 November 2025 (2 papers)

[499] doi:10.1016/j.neuroimage.2025.121600 [paper]
Altered neurobehavioral white matter integrity in preterm children: A confounding-controlled analysis using the adolescent brain and cognitive development (ABCD) study.
Journal: NeuroImage
Status: code on request
[500] doi:10.1038/s44220-025-00523-2 [paper, repository]
Sex-specific differences in brain activity dynamics of youth with a family history of substance use disorder.
Journal: Nature. Mental health
Authors' code: louisaschill/abcd_fhsud_nct (no license)
Status: code verified, 377 files readable, 18 matches

Thursday, 20 November 2025 (2 papers)

[501] doi:10.1038/s44318-025-00624-9 [paper, repository]
Direct and indirect neurogenesis from radial glial progenitor cell clones in the mouse neocortex.
Journal: The EMBO journal
Status: code verified, 4 files readable
[502] doi:10.1186/s12987-025-00731-z [paper, repository]
Translational biomarkers of hypoxic brain injury uncovered in CSF secreting human choroid plexus organoids.
Journal: Fluids and barriers of the CNS
Authors' code: iontorrent/TMAP (other)
Status: code verified, 180 files readable

Wednesday, 19 November 2025 (4 papers)

[503] doi:10.1038/s42003-025-09022-7 [paper, repository]
Socioeconomic context influences the heritability of child cortical structure.
Journal: Communications biology
Authors' code: OSF azucp (no license)
Status: empty repository
[504] doi:10.1038/s44319-025-00619-x [paper, repository]
Increased reproducibility of brain organoids through controlled fluid dynamics.
Journal: EMBO reports
Status: code verified, 6 files readable, 5 matches
[505] doi:10.1016/j.envres.2025.123333 [paper, repository]
Longitudinal associations between air pollution and adolescent gray matter development: Insights from the ABCD study.
Journal: Environmental research
Authors' code: OSF gx64j (no license)
Status: code verified, 4 files readable, 1 match
[506] doi:10.1016/j.dcn.2025.101645 [paper, repository]
Language exposure predicts infants' neural processing of others' actions based on language group.
Journal: Developmental cognitive neuroscience
Authors' code: OSF y32ub (no license)
Status: code verified, 3 files readable

Tuesday, 18 November 2025 (5 papers)

[507] doi:10.1073/pnas.2504913122 [paper, repository]
Building the connectome of a small brain with a simple stochastic developmental generative model.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: schneidmanlab/BrainBuildingPaper (no license)
Status: code verified, 26 files readable, 4 matches
[508] doi:10.1038/s41467-025-65269-y [paper, data]
DNA replication fork speed acts as a pacer in cortical neurogenesis.
Journal: Nature communications
Status: data only, 1 dataset cited
[509] doi:10.1038/s42003-025-08962-4 [paper, repository]
Transcriptomic divergence of network hubs in the prenatal human brain.
Journal: Communications biology
Authors' code: garedaba/prenatal-hubs (MIT)
Status: code verified, 28 files readable, 7 matches
[510] doi:10.3390/biomedicines13112806 [paper, data]
Immaturity-Dependent Hippocampal Neurogenic Promotion and Fate Shift by Low-Dose Propofol in Neonatal Mice Revealed Through Single-Nuclei RNA-Sequencing.
Journal: Biomedicines
Status: data only, 1 dataset cited
[511] doi:10.3389/fnins.2025.1655456 [paper]
Gut microbiota signatures in tuberous sclerosis complex and epilepsy: a pilot study.
Journal: Frontiers in neuroscience
Status: data only

Monday, 17 November 2025 (1 paper)

[512] doi:10.1080/17501911.2025.2583893 [paper, repository]
Blood and adipose tissue DNA methylation in adults born preterm with a very low birth weight - a sibling comparison study.
Journal: Epigenomics
Authors' code: perishky/meffil (Artistic-2.0)
Status: code verified, 123 files readable, 3 matches

Sunday, 16 November 2025 (1 paper)

[513] doi:10.1016/j.dcn.2025.101646 [paper, repository]
Longitudinal associations between adolescent adversity, brain development and behavioural and emotional problems.
Journal: Developmental cognitive neuroscience
Authors' code: brain-adversity-mentalhealth.netlify.app (no license)
Status: code verified

Friday, 14 November 2025 (4 papers)

[514] doi:10.1038/s42003-025-08932-w [paper, repository]
Human brain R2* transitions across birth from the womb to early infancy.
Journal: Communications biology
Authors' code: Zenodo 14051966 (CC-BY-4.0), Zenodo 17109779 (CC-BY-4.0)
Status: code verified
[515] doi:10.1007/s00247-025-06403-2 [paper, repository]
Towards automated fetal brain biometry reporting for 3-dimensional T2-weighted 0.55-3T magnetic resonance imaging at 20-40 weeks gestational age range.
Journal: Pediatric radiology
Authors' code: SVRTK/auto-proc-svrtk (GPL-3.0), BioMedIA/MIRTK (Apache-2.0), hub.docker.com/r/fetalsvrtk (no license), doi:10.12751/g-node.ysgsy1 (no license)
Status: code verified, 769 files readable, 8 matches
[516] doi:10.1016/j.xpro.2025.104211 [paper]
Protocol for culturing olfactory epithelium organoids supporting neuronal differentiation.
Journal: STAR protocols
Status: code on request
[517] doi:10.1162/imag.a.971 [paper, data]
Left hemisphere abnormalities in face-selective activation and functional connectivity in developmental prosopagnosia.
Journal: Imaging neuroscience (Cambridge, Mass.)
Status: data only, 1 dataset cited

Thursday, 13 November 2025 (1 paper)

[518] doi:10.1038/s41386-025-02249-2 [paper, repository]
Independent brain cortical signatures of risk for adolescent cannabis use and consequences of such use are moderated by sex.
Journal: Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology
Authors' code: richardajdear/AHBA_gradients (no license)
Status: code verified, 32 files readable

Tuesday, 11 November 2025 (3 papers)

[519] doi:10.1038/s41467-025-64381-3 [paper, repository]
Deciphering cell-type-and temporally specific matrisome expression signatures in human cortical development and neurodevelopmental disorders via scRNA-seq meta-analysis.
Journal: Nature communications
Authors' code: KANGBERGLAB/matrisome-meta-analysis (no license), Zenodo 16811863 (CC-BY-4.0)
Status: code verified, 36 files readable, 9 matches
[520] doi:10.1186/s13059-025-03857-3 [paper, data]
Uli-epic: profiling RNA modifications from ultra-low input samples.
Journal: Genome biology
Status: data only, 1 dataset cited
[521] doi:10.1016/j.xpro.2025.104196 [paper, repository]
Protocol for the generation of three-dimensional micropatterned neuroepithelial tissues using hPSCs, bioprinting, and matrix scaffolds.
Journal: STAR protocols
Authors' code: OSF 538qa (no license), ncviewer.com (no license)
Status: code verified

Monday, 10 November 2025 (1 paper)

[522] doi:10.1111/add.70246 [paper, repository]
Electrophysiological sexual dimorphism as an early risk marker of alcohol use in adolescence: A longitudinal neuroimaging study.
Journal: Addiction (Abingdon, England)
Authors' code: OSF dtb2u (no license), rbruna/meeg_analysis (GPL-3.0)
Status: code verified, 428 files readable, 5 matches

Saturday, 8 November 2025 (1 paper)

[523] doi:10.1111/jcpp.70074 [paper, repository]
Individual differences in effects of stressful life events on childhood ADHD: genetic, neural, and familial contributions.
Journal: Journal of child psychology and psychiatry, and allied disciplines
Authors' code: grf-labs.github.io/grf (no license)
Status: code verified

Friday, 7 November 2025 (2 papers)

[524] doi:10.1002/dvdy.70072 [paper, repository]
Mathematical modeling predicts novel mechanisms of stream confinement from Trail/Colec12/Dan in the collective migration of cranial neural crest cells.
Journal: Developmental dynamics : an official publication of the American Association of Anatomists
Authors' code: SWSJChCh/leaderFollower (no license)
Status: code verified, 17 files readable, 3 matches
[525] doi:10.1038/s41467-025-64810-3 [paper, repository]
Environmental stiffness regulates neuronal maturation via Piezo1-mediated transthyretin activity.
Journal: Nature communications
Authors' code: rknt/cell-activity-from-calcium-imaging (MIT), Zenodo 12742961 (CC-BY-4.0), lemur01/synpasestat (GPL-3.0), erkannt/patchclamp-analysis (no license), franzelab/afm-data-analysis-and-processing (GPL-3.0), franzelab/brainfusion (MIT), erkannt/automated-sholl-analysis (no license), Zenodo 17152358 (GPL-3.0), Zenodo 17154501 (MIT), Zenodo 17154037 (GPL-3.0), Zenodo 17154457 (CC-BY-4.0), Zenodo 17157938 (MIT), Zenodo 17154451 (CC-BY-4.0), lemur01/synapsestat (GPL-3.0), alexwinkel/afm-data-analysis-and-processing (GPL-3.0), erkannt/automated-scholl-analysis (no license), erkannt/cell-activity-from-calcium-imaging (MIT)
Status: code verified, 357 files readable, 15 matches

Wednesday, 5 November 2025 (4 papers)

[526] doi:10.1038/s44319-025-00621-3 [paper]
Modelling human adult V-SVZ niche assembly and ependymal cell generation in brain organoids.
Journal: EMBO reports
Status: data only
[527] doi:10.1038/s42003-025-08866-3 [paper, repository]
Longitudinal development of sex differences in the limbic system is associated with age, puberty and mental health.
Journal: Communications biology
Authors' code: gloriamatte (no license)
Status: code verified
[528] doi:10.1038/s41586-025-09592-w [paper, repository]
Conservation and alteration of mammalian striatal interneurons.
Journal: Nature
Authors' code: mdeber/Corrigan2024 (no license)
Status: code verified, 80 files readable, 26 matches
[529] doi:10.1038/s41586-025-09033-8 [paper, repository]
Lineage-resolved atlas of the developing human cortex.
Journal: Nature
Authors' code: mattgkeefe/sticr_paper_code (no license)
Status: code verified, 5 files readable, 1 match

Tuesday, 4 November 2025 (1 paper)

[530] doi:10.1016/j.xhgg.2025.100542 [paper]
CUL1 variants cause severe neurodevelopmental disorders: Insights from human genetics and a zebrafish model of microcephaly.
Journal: HGG advances
Status: code on request

Monday, 3 November 2025 (2 papers)

[531] doi:10.1073/pnas.2506145122 [paper, data]
Parental investment and body temperature explain encephalization in vertebrates.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited
[532] doi:10.3389/fnbeh.2025.1695375 [paper, data]
Adolescent mice exhibit lower reward sensitivity than adults.
Journal: Frontiers in behavioral neuroscience
Status: data only, 1 dataset cited

Sunday, 2 November 2025 (1 paper)

[533] doi:10.1002/cac2.70074 [paper, repository]
In vivo intratumoral heterogeneity in a dish: scalable forebrain organoid models of embryonal brain tumors for high-throughput personalized drug discovery.
Journal: Cancer communications (London, England)
Authors' code: satijalab.org/seurat (no license)
Status: code verified

Saturday, 1 November 2025 (7 papers)

[534] doi:10.1093/hmg/ddaf131 [paper, repository]
Genetic heterogeneity and homogeneity among orofacial cleft subtypes: genome-wide association studies in the cleft collective.
Journal: Human molecular genetics
Authors' code: MRCIEU/ieugwasr (other)
Status: code verified, 24 files readable
[535] doi:10.1002/cne.70106 [paper, data]
Differences in Cajal-Retzius Cell Density and Postnatal Persistence Across Cortical Areas Revealed by a Novel Intersectional Genetic Labeling Approach.
Journal: The Journal of comparative neurology
Status: data only, 1 dataset cited
[536] doi:10.1002/dev.70101 [paper, repository]
The Development of Lateralized Brain Oscillations in Infants: Lessons From Autism.
Journal: Developmental psychobiology
Status: code verified, 4 files readable, 1 match
[537] doi:10.1002/hbm.70403 [paper, repository]
Diffusion MRI Microstructure Markers of Changes in the Human Brain Across the Lifespan Using Constrained Spherical Deconvolution and Fixel-Based Techniques.
Journal: Human brain mapping
Authors' code: 3tissue.github.io (no license), btn6sb/Conduction_Velocity (no license)
Status: code verified, 1 file readable
[538] doi:10.1093/bib/bbaf644 [paper, repository]
STIFT: spatiotemporal transcriptomics integration through spatially informed multi-timepoint bridging.
Journal: Briefings in bioinformatics
Authors' code: cuhklinlab/STIFT (no license), figshare 28758650 (CC-BY-4.0)
Status: code verified, 32 files readable, 10 matches
[539] doi:10.1093/nar/gkaf1397 [paper, data]
METTL3 and METTL14 determine human neural fate specifications.
Journal: Nucleic acids research
Status: data only, 1 dataset cited
[540] doi:10.1093/cercor/bhaf305 [paper, data]
Growth and development of the precuneus in humans from birth to early adulthood.
Journal: Cerebral cortex (New York, N.Y. : 1991)
Status: data only, 2 datasets cited

Friday, 31 October 2025 (2 papers)

[541] doi:10.1038/s42003-025-08913-z [paper]
Spatial development of brain networks during the first six postnatal months.
Journal: Communications biology
Status: code on request
[542] doi:10.3389/fendo.2025.1665391 [paper]
Hypothalamic FTO upregulates BDNF to promote GnRH expression through the PI3K/Akt pathway, leading to precocious puberty.
Journal: Frontiers in endocrinology
Status: data only

Thursday, 30 October 2025 (6 papers)

[543] doi:10.1038/s41467-025-64988-6 [paper, repository]
Childhood gut microbiome is linked to internalizing symptoms at school age via the functional connectome.
Journal: Nature communications
Authors' code: Zenodo 16884691 (CC-BY-4.0), fquerdasi/gusto_microbiome_brain_internalizingsx (CC-BY-NC-SA-4.0)
Status: code verified, 10 files readable, 14 matches
[544] doi:10.1016/j.celrep.2025.116498 [paper, repository]
In vivo differentiation of embryonic cells devoid of key reprogramming factors.
Journal: Cell reports
Authors' code: GiraldezLab/scMZnps (MIT)
Status: code verified, 8 files readable
[545] doi:10.1016/j.nicl.2025.103896 [paper, repository]
Consistency of reward responses in neutral and anxious states in adolescent females with anorexia nervosa.
Journal: NeuroImage. Clinical
Status: code verified, 5 files readable, 2 matches
[546] doi:10.1080/29979676.2025.2566646 [paper, repository]
Covariate Adjusted Functional Mixed Membership Models.
Journal: Statistics and data science in imaging
Authors' code: ndmarco/BFMMM_CA_Functional_Sims (no license)
Status: code verified, 10 files readable, 1 match
[547] doi:10.1016/j.isci.2025.113898 [paper, repository]
Rapid neonatal AAV delivery for adult cortical two-photon imaging of genetically encoded sensors.
Journal: iScience
Authors' code: mjskay/ARTool (GPL), Zenodo 17117568 (GPL-2.0), proektlab/wisser_blackwood_fig8_2p_analysis (GPL-2.0)
Status: code verified, 275 files readable, 7 matches
[548] doi:10.1016/j.bpsgos.2025.100643 [paper, repository]
Increased Brain-Age Gap in Young Adults With Psychotic Experiences.
Journal: Biological psychiatry global open science
Authors' code: rafaloz/BRAPIDD_BA (no license)
Status: code verified, 7 files readable, 2 matches

Wednesday, 29 October 2025 (1 paper)

[549] doi:10.3389/fphar.2025.1681094 [paper, data]
CEST MRI detects antiretroviral drug toxicities in the developing mouse brain.
Journal: Frontiers in pharmacology
Status: data only, 1 dataset cited

Tuesday, 28 October 2025 (1 paper)

[550] doi:10.7554/elife.99502 [paper, data]
Neuronal migration depends on blood flow in the adult mammalian brain.
Journal: eLife
Status: data only, 1 dataset cited

Monday, 27 October 2025 (2 papers)

[551] doi:10.1073/pnas.2502674122 [paper, repository]
Quantitative MRI of the hippocampus reveals microstructural trajectories of aging and Alzheimer's disease pathology.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: khanlab/hippunfold (MIT)
Status: code verified, 68 files readable
[552] doi:10.1038/s41593-025-02076-0 [paper, repository]
Longitudinal measures of monkey brain structure and activity through adolescence predict cognitive maturation.
Journal: Nature neuroscience
Authors' code: garincle/EDNiX (no license), Zenodo 14801141 (CC-BY-4.0), codeocean:7858389 (no license), Zenodo 14801142 (CC-BY-4.0)
Status: code verified, 275 files readable, 9 matches

Sunday, 26 October 2025 (1 paper)

[553] doi:10.1186/s41235-025-00685-8 [paper, data]
Preserved use of prior information under time constraints: an EEG study of action anticipation in expert athletes.
Journal: Cognitive research: principles and implications
Status: code on request, 1 dataset cited

Friday, 24 October 2025 (3 papers)

[554] doi:10.1002/advs.202502145 [paper, data]
Subventricular Zone-on-a-Chip: A Model to Study Neurogenesis Disruption in Neonatal Intraventricular Hemorrhage.
Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)
Status: data only, 1 dataset cited
[555] doi:10.1159/000549155 [paper, data]
Genetic Characterization of 128 Chinese Individuals with Neurodevelopmental Disorders via Whole-Exome Sequencing.
Journal: Developmental neuroscience
Status: data only, 1 dataset cited
[556] doi:10.1016/j.radonc.2025.111224 [paper, data]
Relative biological effectiveness and neural stem cell fate in carbon ion-irradiated human brain organoids.
Journal: Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology
Status: data only, 1 dataset cited

Thursday, 23 October 2025 (2 papers)

[557] doi:10.1159/000549093 [paper, data]
Subtype- and Layer-Specific Developmental Gradients of Postnatal GABAergic Neurons in the Rodent Barrel Cortex.
Journal: Developmental neuroscience
Status: data only, 1 dataset cited
[558] doi:10.1016/j.isci.2025.113831 [paper, repository]
Variability vs. phenotype: Multimodal analysis of Dravet syndrome brain organoids powered by deep learning.
Journal: iScience
Authors' code: Zenodo 10636044 (CC-BY-4.0)
Status: code verified, 35 files readable, 5 matches

Wednesday, 22 October 2025 (4 papers)

[559] doi:10.1038/s41586-025-09651-2 [paper, repository]
Integration of hunger and hormonal state gates infant-directed aggression.
Journal: Nature
Status: code verified, 71 files readable, 13 matches
[560] doi:10.1016/j.jare.2025.10.034 [paper, data]
Divergence between neural and retinal lineage specification during human brain development by signal transduction.
Journal: Journal of advanced research
Status: code on request, 1 dataset cited
[561] doi:10.21037/qims-2025-218 [paper, repository]
The early alteration of brainstem and cerebellum, and their relationship with cerebral cortex: an &lt;i&gt;in vivo&lt;/i&gt; fetal magnetic resonance imaging assessment.
Journal: Quantitative imaging in medicine and surgery
Authors' code: BioMedIA/dhcp-structural-pipeline (Apache-2.0)
Status: code verified, 1,250 files readable
[562] doi:10.1016/j.dcn.2025.101616 [paper, data]
Cortical latency predicts reading fluency from late childhood to early adolescence.
Journal: Developmental cognitive neuroscience
Status: data only, 1 dataset cited

Tuesday, 21 October 2025 (7 papers)

[563] doi:10.1073/pnas.2512855122 [paper, repository]
Neuronal plasticity at puberty in mouse hypothalamic &lt;i&gt;Kiss1&lt;/i&gt; neurons that control fertility.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: goczbalazs/PRJNA1262115 (no license)
Status: code verified, 3 files readable, 1 match
[564] doi:10.1038/s41398-025-03614-x [paper, repository]
Sex differences in response to violence: role of salience network expansion and connectivity on depression.
Journal: Translational psychiatry
Authors' code: NU-ACNLab/mwmh (no license), NU-ACNLab/violence_sex_development (no license)
Status: code verified, 281 files readable, 11 matches
[565] doi:10.1038/s44318-025-00605-y [paper, repository]
Post-replicative initial expression of PAX6 during neuroectoderm differentiation.
Journal: The EMBO journal
Authors' code: Rong-ao/NPC_multiomics (no license)
Status: code verified, 11 files readable, 10 matches
[566] doi:10.1186/s12884-025-07746-2 [paper, repository]
Assessing the impact of fetal growth restriction using high-resolution MRI: a comprehensive cortical analysis.
Journal: BMC pregnancy and childbirth
Authors' code: sj-huang/FGR_cortex (no license)
Status: empty repository, 1 file readable
[567] doi:10.1101/2025.10.20.683525 [paper, data]
Insights into Temporal and Spatial Dynamics of Short Association Fiber Formation in the Human Fetal Brain
Journal: bioRxiv (preprint)
Status: data only, 2 datasets cited
[568] doi:10.1016/j.crmeth.2025.101208 [paper, repository]
An optimized click chemistry method allows visualization of proliferating neuronal progenitors in the mouse brain.
Journal: Cell reports methods
Authors' code: figshare 29815871 (CC-BY-4.0)
Status: code verified, 4 files readable, 1 match
[569] doi:10.1162/imag.a.946 [paper]
Altered adult brain morphology in a mouse model of late-onset fetal growth restriction.
Journal: Imaging neuroscience (Cambridge, Mass.)
Status: code on request

Monday, 20 October 2025 (1 paper)

[570] doi:10.1192/j.eurpsy.2025.10116 [paper, repository]
The moderating effect of lifetime physical activity on brain alterations related to adverse childhood experiences.
Journal: European psychiatry : the journal of the Association of European Psychiatrists
Authors' code: neuro-jena.github.io/enigma-cat12 (no license)
Status: code verified

Friday, 17 October 2025 (1 paper)

[571] doi:10.1162/imag.a.928 [paper, repository]
Audiovisual integration and whole-brain networks in preterm and full-term neonates: A two-layer multiplex network perspective on structural and functional connectivity.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: OSF 5px9e (no license)
Status: code verified, 3 files readable, 3 matches

Thursday, 16 October 2025 (2 papers)

[572] doi:10.1038/s42003-025-08874-3 [paper, repository]
Diffusion trajectory of atypical morphological development in autism spectrum disorder.
Journal: Communications biology
Authors' code: yu-feng-0926/-distribution-deviations (no license)
Status: empty repository, 1 file readable
[573] doi:10.3390/jcm14207299 [paper, data]
SEPoolConvNeXt: A Deep Learning Framework for Automated Classification of Neonatal Brain Development Using T1- and T2-Weighted MRI.
Journal: Journal of clinical medicine
Status: data only, 1 dataset cited

Wednesday, 15 October 2025 (3 papers)

[574] doi:10.1126/sciadv.adx1327 [paper, data]
Developmental alterations in brain network asymmetry in 3- to 9-month infants with congenital sensorineural hearing loss.
Journal: Science advances
Status: data only, 1 dataset cited
[575] doi:10.1098/rsos.251069 [paper, data]
Inactive but awake behaviour as indicating a depression-like state in mice: aetiological factors and association with adult hippocampal neurogenesis.
Journal: Royal Society open science
Status: data only, 1 dataset cited
[576] doi:10.1098/rsos.250100 [paper, repository]
Behavioural types correlate with the gut microbiome in juvenile wild and reared gilthead seabream.
Journal: Royal Society open science
Authors' code: doi:10.6084/m9.figshare.c.8022541 (no license)
Status: code found, still to be checked

Tuesday, 14 October 2025 (3 papers)

[577] doi:10.1038/s42003-025-08873-4 [paper, repository]
Edge participation coefficient unveiling the developmental dynamics of neonatal functional connectome.
Journal: Communications biology
Authors' code: brain-networks (no license), TianyuFang2000/ePC_master (no license)
Status: code verified, 18 files readable, 9 matches
[578] doi:10.1038/s42003-025-08890-3 [paper, repository]
Genetically tractable embryonic cell lines from sea urchins Lytechinus variegatus and Strongylocentrotus purpuratus.
Journal: Communications biology
Authors' code: kcastellano13/Sea-urchin-cell-culture (no license), UrchinOmics/urchinCultures (no license), Zenodo 17057943 (CC-BY-4.0), Zenodo 17064287 (CC-BY-4.0)
Status: code verified, 56 files readable, 10 matches
[579] doi:10.1093/braincomms/fcaf396 [paper, repository]
Enduring prenatal androgen effects on the female brain.
Journal: Brain communications
Status: code found, still to be checked

Monday, 13 October 2025 (3 papers)

[580] doi:10.1371/journal.pone.0333903 [paper, repository]
EEG difference in the Higuchi fractal dimension of wakefulness and sleep from birth to adolescence.
Journal: PloS one
Authors' code: supp:PMC12517535/pone.0333903.s003.m (no license)
Status: code verified, 1 file readable, 1 match
[581] doi:10.1016/j.xpro.2025.104142 [paper]
Protocol for purifying primitive neural progenitors by fractional passaging to generate astroglia-enriched cerebral organoid.
Journal: STAR protocols
Status: code on request
[582] doi:10.3390/genes16101191 [paper, data]
PRC2 Diversity in Neuronal Differentiation and Developmental Disorders.
Journal: Genes
Status: data only, 1 dataset cited

Sunday, 12 October 2025 (1 paper)

[583] doi:10.1016/j.dcn.2025.101629 [paper, repository]
Tracking functional brain networks in preterm and term infants using precision mapping.
Journal: Developmental cognitive neuroscience
Authors' code: mandymejia/templateICAr (no license), FerradalLab/babyBayes (GPL-3.0)
Status: code verified, 46 files readable, 8 matches

Saturday, 11 October 2025 (1 paper)

[584] doi:10.1186/s12974-025-03559-4 [paper, data]
Early immune responses to systemic inflammation in the postnatal mouse brain initiated by migrating macrophages and leptomeningeal fibroblasts.
Journal: Journal of neuroinflammation
Status: data only, 1 dataset cited

Friday, 10 October 2025 (1 paper)

[585] doi:10.1016/j.dcn.2025.101630 [paper, repository]
Meaningful Associations Redux: Quantifying and interpreting effect size in the context of the Adolescent Brain and Cognitive Development study.
Journal: Developmental cognitive neuroscience
Status: code verified, 22 files readable

Thursday, 9 October 2025 (1 paper)

[586] doi:10.3390/genes16101174 [paper, data]
Bridging Genotype to Phenotype in &lt;i&gt;KMT5B&lt;/i&gt;-Related Syndrome: Evidence from RNA-Seq, &lt;sup&gt;18&lt;/sup&gt;FDG-PET, Clinical Deep Phenotyping in Two New Cases, and a Literature Review.
Journal: Genes
Status: data only, 1 dataset cited

Tuesday, 7 October 2025 (2 papers)

[587] doi:10.1017/s0033291725101773 [paper]
The relationship between recreational cannabis use, psychotic-like experiences, and the salience network in adolescent and young adult twins.
Journal: Psychological medicine
Status: code on request
[588] doi:10.1080/19420889.2025.2568307 [paper, repository]
Identification of brain-like complex information architectures in embryonic tissue of &lt;i&gt;Xenopus laevis&lt;/i&gt; organoids.
Journal: Communicative & integrative biology
Authors' code: caitlingrasso/calcium-signal-extraction (no license)
Status: code verified, 2 files readable

Monday, 6 October 2025 (1 paper)

[589] doi:10.1186/s12967-025-07032-x [paper, data]
ATP5F1A deficiency causes developmental delay and motor dysfunction in humans and zebrafish.
Journal: Journal of translational medicine
Status: data only, 1 dataset cited

Saturday, 4 October 2025 (1 paper)

[590] doi:10.1016/j.isci.2025.113707 [paper, repository]
Vision drives the neural construction of a two-stage hierarchy of spatial processing in infancy.
Journal: iScience
Authors' code: sccn.ucsd.edu/eeglab/index.php (no license), r-project.org (no license)
Status: code verified

Friday, 3 October 2025 (2 papers)

[591] doi:10.1080/15476286.2025.2563986 [paper, data]
Altering rRNA 2'O-methylation pattern during neuronal differentiation is regulated by FMRP.
Journal: RNA biology
Status: data only, 1 dataset cited
[592] doi:10.1016/j.dcn.2025.101624 [paper, repository]
Brain functional connectivity, but not neuroanatomy, captures the interrelationship between sex and gender in preadolescents.
Journal: Developmental cognitive neuroscience
Authors' code: ABCD-STUDY/nda-abcd-collection-3165 (BSD-3-Clause), Zenodo 10779163 (CC-BY-4.0), nasiametoki/brain_sex_gender (no license), elvisha/sg_predictions (MIT)
Status: code verified, 22 files readable, 3 matches

Thursday, 2 October 2025 (3 papers)

[593] doi:10.1186/s11689-025-09643-3 [paper, data]
The neurodevelopmental spectrum of CASK-related disorder.
Journal: Journal of neurodevelopmental disorders
Status: code on request, 1 dataset cited
[594] doi:10.1186/s12983-025-00583-1 [paper, repository]
Tracking domestication signals across populations of North American raccoons (Procyon lotor) via citizen science-driven image repositories.
Journal: Frontiers in zoology
Authors' code: OSF 56xcg (no license)
Status: code verified, 2 files readable, 1 match
[595] doi:10.3389/fgene.2025.1665548 [paper, data]
Time-series transcriptomics and alternative splicing analysis of embryonic development of the asian honeybee (&lt;i&gt;Apis cerana&lt;/i&gt;).
Journal: Frontiers in genetics
Status: data only, 1 dataset cited

Wednesday, 1 October 2025 (5 papers)

[596] doi:10.1002/hbm.70348 [paper, repository]
Individual Differences in Developmental Trajectories of Global and Subcortical Brain Volumes Between Late Childhood and Late Adolescence: Findings From a 12-Wave Neuroimaging Study.
Journal: Human brain mapping
Authors' code: OSF wujzs (no license)
Status: code verified, 6 files readable, 1 match
[597] doi:10.1002/hbm.70349 [paper, repository]
Cross-Modality Comparison of Fetal Brain Phenotypes: Insights From Short-Interval Second-Trimester MRI and Ultrasound Imaging.
Journal: Human brain mapping
Authors' code: SVRTK/SVRTK (Apache-2.0), doi:10.12751/g-node.ysgsy1 (no license)
Status: code verified, 69 files readable
[598] doi:10.1002/hbm.70373 [paper, repository]
Similarity in Early Life Stress Exposure Is Associated With Similarity in Neural Representations in Early Adulthood.
Journal: Human brain mapping
Authors' code: OSF j6bh2 (no license)
Status: code verified, 1 file readable, 2 matches
[599] doi:10.1002/hbm.70367 [paper, repository]
Deep Learning for fODF Estimation in Infant Brains: Model Comparison, Ground-Truth Impact, and Domain Shift Mitigation.
Journal: Human brain mapping
Status: code verified, 27 files readable, 8 matches
[600] doi:10.1117/1.nph.12.4.045012 [paper, data]
Significant interactions in infant operculum regions when exposed to a bilingual environment: a resting-state fNIRS study.
Journal: Neurophotonics
Status: data only, 1 dataset cited

Tuesday, 30 September 2025 (1 paper)

[601] doi:10.1016/j.neuroimage.2025.121489 [paper, repository]
Early White Matter Microstructure Alterations in Infants with Down Syndrome.
Journal: NeuroImage
Authors' code: ale-nasir/WMMA-Infants-DS-Pipeline (no license)
Status: empty repository, 1 file readable

Monday, 29 September 2025 (4 papers)

[602] doi:10.1002/advs.202505535 [paper, data]
Pathogenicity of Mediator Complex Subunit 27 (MED27) in a Neurodevelopmental Disorder with Cerebellar Atrophy.
Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)
Status: data only, 1 dataset cited
[603] doi:10.1371/journal.pgen.1011843 [paper, repository]
Polycomb repressive complexes 1 and 2 independently and dynamically regulate euchromatin during cerebellar neurodevelopment.
Journal: PLoS genetics
Authors' code: FergusonLab/CUT-RUN-pipeline (MIT)
Status: code verified, 8 files readable, 2 matches
[604] doi:10.1038/s41467-025-63661-2 [paper, repository]
Motion impact score for detecting spurious brain-behavior associations.
Journal: Nature communications
Authors' code: DosenbachGreene/abcde (no license), DosenbachGreene/shaman (no license), DCAN-Labs/abcd-hcp-pipeline (BSD-3-Clause)
Status: code verified, 73 files readable, 11 matches
[605] doi:10.1186/s11689-025-09651-3 [paper, repository]
The association between infant EEG aperiodic exponent and the trajectory of restricted and repetitive behaviors for toddlers with and without autism.
Journal: Journal of neurodevelopmental disorders
Authors' code: OSF u3gp4 (no license), OSF 7zf5y (no license)
Status: code verified, 32 files readable, 12 matches

Friday, 26 September 2025 (3 papers)

[606] doi:10.1371/journal.pone.0332718 [paper, repository]
No clear evidence for a domain-general violation of expectation effect in the pupillary responses of 9- to 10-month-olds.
Journal: PloS one
Authors' code: OSF kwg9r (no license)
Status: code verified, 5 files readable, 1 match
[607] doi:10.1038/s41467-025-63312-6 [paper, repository]
Polygenic architecture of brain structure and function, behaviors, and psychopathologies in children.
Journal: Nature communications
Authors' code: transconnectome/abcd-gps (MIT)
Status: code verified, 14 files readable, 4 matches
[608] doi:10.1016/j.bpsgos.2025.100619 [paper, repository]
Altered Interpersonal Neural Synchronization During Social Interaction After Shared Excluded Experiences in Adolescents With Depression.
Journal: Biological psychiatry global open science
Status: code verified, 1 file readable, 1 match

Thursday, 25 September 2025 (1 paper)

[609] doi:10.1038/s41598-025-16856-y [paper, repository]
Adolescent suicide behaviors associate with accelerated reductions in cortical gray matter volume and slower decay of behavioral activation Fun-Seeking scores.
Journal: Scientific reports
Authors' code: OSF nxyb5 (no license)
Status: code verified, 7 files readable, 1 match

Wednesday, 24 September 2025 (2 papers)

[610] doi:10.1016/j.celrep.2025.116238 [paper, data]
Radiofrequency regulates the BET-mediated pathways in radial glia differentiation in human cortical development.
Journal: Cell reports
Status: code on request, 1 dataset cited
[611] doi:10.1016/j.xgen.2025.101010 [paper, repository]
Cell-type-specific DNA methylation dynamics in the prenatal and postnatal human cortex.
Journal: Cell genomics
Authors' code: alicemfr/DevCortexDNAm (no license), Zenodo 16876128 (CC-BY-4.0), perishky/dmrff (Artistic-2.0), ejh243/CETYGO (Artistic-2.0)
Status: code verified, 163 files readable, 24 matches

Tuesday, 23 September 2025 (2 papers)

[612] doi:10.1016/j.gim.2025.101587 [paper, repository]
Comprehensive genotypic, phenotypic, and biochemical characterization of GOT2 deficiency: A progressive neurodevelopmental disorder with epilepsy and abnormal movements.
Journal: Genetics in medicine : official journal of the American College of Medical Genetics
Authors' code: UMCUGenetics/DIMS (MIT)
Status: code verified, 3 files readable
[613] doi:10.3389/fnins.2025.1633386 [paper, repository]
Differential susceptibility to prenatal stress exposure in serotonin transporter-deficient female mice-an epigenetic exploration.
Journal: Frontiers in neuroscience
Authors' code: Zenodo 3564938 (other-open), bcbio/bcbio-nextgen (MIT)
Status: code verified, 636 files readable, 2 matches

Monday, 22 September 2025 (1 paper)

[614] doi:10.1162/imag.a.156 [paper, repository]
Mapping individual differences in intermodal coupling in neurodevelopment.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: ruyipan/CEIDR (other)
Status: code verified, 11 files readable, 2 matches

Sunday, 21 September 2025 (1 paper)

[615] doi:10.1002/jad.70054 [paper, repository]
Genetic and Environmental Associations Among Pain, Sleep Disturbances, and Substance Use Intent in Early Adolescence.
Journal: Journal of adolescence
Authors' code: nda.nih.gov (no license)
Status: code verified

Friday, 19 September 2025 (3 papers)

[616] doi:10.1101/2025.09.19.677368 [paper]
Verbal Episodic Processing in Newborns
Journal: bioRxiv (preprint)
Status: code on request
[617] doi:10.7759/cureus.92738 [paper, data]
Neural Correlates of Social Exclusion and Childhood Trauma in Borderline Personality Disorder.
Journal: Cureus
Status: data only, 1 dataset cited
[618] doi:10.1162/netn_a_00452 [paper, repository]
Dynamic fluctuations of intrinsic brain activity are associated with consistent topological patterns in puberty and are biomarkers of neural maturation.
Journal: Network neuroscience (Cambridge, Mass.)
Status: code verified, 35 files readable, 9 matches

Thursday, 18 September 2025 (4 papers)

[619] doi:10.1242/dev.204697 [paper, data]
Chd4 remodels chromatin to control retinal cell type specification and lineage termination.
Journal: Development (Cambridge, England)
Status: data only, 1 dataset cited
[620] doi:10.1371/journal.pbio.3003378 [paper, repository]
Humans have a longer period of cortical maturation across depth and hierarchy than macaques.
Journal: PLoS biology
Authors' code: monami-nishio/prolonged_cortical_maturation (no license), Zenodo 16786211 (CC-BY-4.0)
Status: code verified, 34 files readable, 2 matches
[621] doi:10.1002/advs.202410603 [paper]
Excessive DNA Double-Strand Breaks-Associated 3D Genome Reorganization Contributes to Neural Tube Defects with Folate Deficiency.
Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)
Status: data only
[622] doi: [paper, repository]
Social threat, neural connectivity, and adolescent mental health: a population-based longitudinal study
Journal: Psychological medicine
Authors' code: OSF 7xewv (no license)
Status: empty repository

Tuesday, 16 September 2025 (1 paper)

[623] doi:10.1093/braincomms/fcaf302 [paper, data]
Alterations of the neural substrate in childhood apraxia of speech: new evidence from neuroimaging.
Journal: Brain communications
Status: data only, 2 datasets cited

Monday, 15 September 2025 (2 papers)

[624] doi:10.1212/nxi.0000000000200467 [paper]
IV Immunoglobulin Is Associated With Epigenetic, Ribosomal, and Immune Changes in Pediatric Acute-Onset Neuropsychiatric Syndrome.
Journal: Neurology(R) neuroimmunology & neuroinflammation
Status: code on request
[625] doi:10.1016/j.stem.2025.08.010 [paper]
Human adult hippocampal neurogenesis is shaped by neuropsychiatric disorders, demographics, and lifestyle-related factors.
Journal: Cell stem cell
Status: code on request

Saturday, 13 September 2025 (1 paper)

[626] doi:10.1002/mnfr.70262 [paper, data]
Altered Hippocampal Transcriptomic Profile Reveals Cognitive Impairment in Young Metabolically Obese, Normal-Weight Rats, Prevented by Perinatal Leptin Intake.
Journal: Molecular nutrition & food research
Status: data only, 1 dataset cited

Friday, 12 September 2025 (3 papers)

[627] doi:10.1038/s41467-025-63967-1 [paper, repository]
Heterogeneous, temporally consistent, and plastic brain development after preterm birth.
Journal: Nature communications
Authors' code: brainchart/Lifespan (no license), Melissa1909/preterm-brain-heterogeneity (CC-BY-NC-SA-4.0), Zenodo 16875920 (CC-BY-4.0)
Status: code verified, 46 files readable, 18 matches
[628] doi:10.1016/j.celrep.2025.116265 [paper, repository]
Human amygdala nuclei show distinct developmental trajectories from adolescence to adulthood in functional integration with prefrontal circuitry.
Journal: Cell reports
Authors' code: Zenodo 16690846 (MIT), amarojha/amygdala_7t (MIT)
Status: code verified, 58 files readable, 13 matches
[629] doi:10.1162/imag.a.145 [paper, repository]
Brain functional connectivity predicts depression and anxiety during childhood and adolescence: A connectome-based predictive modeling approach.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: fmorfini/publications (MIT)
Status: code verified, 10 files readable, 1 match

Wednesday, 10 September 2025 (2 papers)

[630] doi:10.1091/mbc.e25-02-0066 [paper, data]
Defining the role of integrins in melanoblast migration &lt;i&gt;in vivo&lt;/i&gt;.
Journal: Molecular biology of the cell
Status: data only, 1 dataset cited
[631] doi:10.1162/imag.a.144 [paper, repository]
Widespread associations between behavioral metrics and brain microstructure in ASD suggest age mediates subtypes of ASD.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: btn6sb/Conduction_Velocity (no license)
Status: code verified, 1 file readable

Tuesday, 9 September 2025 (1 paper)

[632] doi:10.1016/j.ajhg.2025.08.015 [paper, data]
Bi-allelic deleterious variants in SNAPIN, which encodes a retrograde dynein adaptor, cause a prenatal-onset neurodevelopmental disorder.
Journal: American journal of human genetics
Status: code on request, 1 dataset cited

Monday, 8 September 2025 (2 papers)

[633] doi:10.1038/s44321-025-00302-7 [paper, repository]
CETN3 deficiency induces microcephaly by disrupting neural stem/progenitor cell fate through impaired centrosome assembly and RNA splicing.
Journal: EMBO molecular medicine
Authors' code: OpenGene/fastp (MIT)
Status: code verified, 68 files readable
[634] doi:10.1016/j.dcn.2025.101611 [paper, data]
Age-related patterns of resting EEG power in infancy: Associations with prenatal socioeconomic disadvantage.
Journal: Developmental cognitive neuroscience
Status: data only, 1 dataset cited

Friday, 5 September 2025 (1 paper)

[635] doi:10.1371/journal.pbio.3003337 [paper, data]
Developmental auditory deprivation in one ear impairs brainstem binaural processing and reduces spatial hearing acuity.
Journal: PLoS biology
Status: data only, 1 dataset cited

Thursday, 4 September 2025 (4 papers)

[636] doi:10.1172/jci.insight.194445 [paper, data]
Thyroid hormone promotes fetal neurogenesis.
Journal: JCI insight
Status: data only, 1 dataset cited
[637] doi:10.1073/pnas.2504185122 [paper, repository]
A thermodynamic perspective on mammalian neural crest ingression.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: code verified, 64 files readable, 2 matches
[638] doi:10.3389/fnmol.2025.1369365 [paper]
Identifying biomarkers of hepatic fatty acid metabolism disorder in sevoflurane-induced brain developmental injury by bioinformatics analysis.
Journal: Frontiers in molecular neuroscience
Status: code on request
[639] doi:10.3390/life15091400 [paper, data]
Neuro-Genomic Mapping of Cardiac Neurons with Systemic Analysis Reveals Cognitive and Neurodevelopmental Impacts in Congenital Heart Disease.
Journal: Life (Basel, Switzerland)
Status: data only, 1 dataset cited

Wednesday, 3 September 2025 (2 papers)

[640] doi:10.1016/j.neuroimage.2025.121442 [paper, repository]
Conditional deep generative normative modeling for structural and developmental anomaly detection in the fetal brain.
Journal: NeuroImage
Status: code verified, 12 files readable, 8 matches
[641] doi:10.3389/fpsyt.2025.1644105 [paper, repository]
Cannabis use in adolescence and young adulthood and its effects on brain structure and function: a scoping review.
Journal: Frontiers in psychiatry
Authors' code: OSF ek9bf (no license)
Status: empty repository

Monday, 1 September 2025 (5 papers)

[642] doi:10.1093/brain/awaf109 [paper, data]
ADAT3 variants disrupt the activity of the ADAT tRNA deaminase complex and impair neuronal migration.
Journal: Brain : a journal of neurology
Status: data only, 2 datasets cited
[643] doi:10.1111/desc.70042 [paper, repository]
Developmental Changes in Nonsymbolic and Symbolic Fractions Processing: A Cross-Sectional fMRI Study.
Journal: Developmental science
Authors' code: OSF r3f7g (no license)
Status: code verified, 1 file readable
[644] doi:10.1038/s42003-025-08683-8 [paper, repository]
Single-cell profiling of H3K4me1-H3K27me3 revealed bivalent regulation of abnormal neuronal development caused by prenatal e-cigarette vaporing.
Journal: Communications biology
Authors' code: cxzhu/Paired-Tag (MIT), satijalab/seurat (other), stuart-lab/signac (other)
Status: code verified, 226 files readable, 7 matches
[645] doi:10.1080/19490976.2025.2551104 [paper, data]
Synbiotic intervention reverses alcohol drinking-induced cognitive deficits in adolescent male mice by modulating the microbiota-gut-brain axis.
Journal: Gut microbes
Status: data only, 1 dataset cited
[646] doi:10.1002/dev.70088 [paper, data]
Social Smiling and Laughter Are Linked to Enhanced Functional Brain Connectivity in Young Infants' Default Mode Network.
Journal: Developmental psychobiology
Status: data only, 1 dataset cited

Sunday, 31 August 2025 (1 paper)

[647] doi:10.1080/19490976.2025.2551879 [paper, repository]
Early-life gut microbiome maturity regulates blood-brain barrier and cognitive development.
Journal: Gut microbes
Authors' code: Zenodo 16897951 (CC-BY-4.0)
Status: code verified, 1 file readable, 13 matches

Saturday, 30 August 2025 (1 paper)

[648] doi:10.1016/j.bandl.2025.105637 [paper, repository]
Initial evidence of altered functional network connectivity in children with developmental language disorder.
Journal: Brain and language
Authors' code: yetianmed/subcortex (MIT), OSF r56s7 (no license)
Status: code verified, 46 files readable

Friday, 29 August 2025 (2 papers)

[649] doi:10.1242/dev.204561 [paper, repository]
Application and measurement of tissue-scale tension in avian epithelia in vivo to study multiscale mechanics and inter-germ layer coupling.
Journal: Development (Cambridge, England)
Status: code verified, 4 files readable, 2 matches
[650] doi:10.1038/s41398-025-03565-3 [paper, repository]
Using deep learning to predict internalizing problems from brain structure in youth.
Journal: Translational psychiatry
Authors' code: marlvan/internalizing_prediction (no license)
Status: dead link

Thursday, 28 August 2025 (2 papers)

[651] doi:10.1556/2006.2025.00068 [paper, repository]
Temperament, brain structure and problematic video gaming in adolescence - A six-year longitudinal study.
Journal: Journal of behavioral addictions
Authors' code: doi:10.5061/dryad.zpc866th0 (no license)
Status: code verified
[652] doi:10.1016/j.physbeh.2025.115079 [paper, repository]
Predicting sugar-sweetened beverage intake from the brain and known risk factors in adolescents.
Journal: Physiology & behavior
Authors' code: grace-shearrer/ABCDssb (no license)
Status: code verified, 5 files readable, 3 matches

Wednesday, 27 August 2025 (2 papers)

[653] doi:10.1186/s13287-025-04571-4 [paper, data]
Extracellular lactate improves neurogenesis by modulating H3K9 lactylation and SnoN expression under hypoxic conditions.
Journal: Stem cell research & therapy
Status: data only, 1 dataset cited
[654] doi:10.1016/j.bbrep.2025.102216 [paper, data]
The ontogeny of circadian clock gene expression during mouse fetal development.
Journal: Biochemistry and biophysics reports
Status: data only, 1 dataset cited

Tuesday, 26 August 2025 (3 papers)

[655] doi:10.1242/dev.204681 [paper, data]
Myocardin-related transcription factor regulates actomyosin contractility and apical junction remodeling during vertebrate neural tube closure.
Journal: Development (Cambridge, England)
Status: data only, 1 dataset cited
[656] doi:10.1186/s12916-025-04332-3 [paper, data]
Structural brain differences in school-aged children who are HIV-exposed uninfected.
Journal: BMC medicine
Status: data only, 1 dataset cited
[657] doi:10.1016/j.crmeth.2025.101143 [paper]
Developmental transformations of Purkinje cells tracked by DNA electrokinetic mobility.
Journal: Cell reports methods
Status: code on request

Monday, 25 August 2025 (1 paper)

[658] doi:10.1111/joa.70035 [paper, repository]
A suture in time: The ontogeny of cranial suture morphology in mammals.
Journal: Journal of anatomy
Authors' code: Ravaat/suture_code (no license)
Status: code verified, 29 files readable, 11 matches

Friday, 22 August 2025 (2 papers)

[659] doi:10.1021/acs.est.5c05886 [paper, repository]
Early Life PBDE Flame Retardant Exposures Cause Neurobehavioral Alterations in Fish That Persist into Adulthood and Vary by Sex and Route of Exposure.
Journal: Environmental science & technology
Authors' code: WhiteheadLab/Multigen_BDE_heteroclitus (no license)
Status: code verified, 2 files readable, 1 match
[660] doi:10.1038/s44294-025-00097-5 [paper]
Early pubertal timing is a risk factor for adolescent dysmenorrhea.
Journal: npj women's health
Status: code on request

Wednesday, 20 August 2025 (4 papers)

[661] doi:10.1038/s41467-025-62637-6 [paper, repository]
Non-genetic neuromodulation with graphene optoelectronic actuators for disease models, stem cell maturation, and biohybrid robotics.
Journal: Nature communications
Authors' code: MarianaSac/Graphene (no license), asavtchenko21/GraMOS (no license), Omowuyi/Organoid-Robot-Control (CC0-1.0)
Status: code verified, 5 files readable
[662] doi:10.1038/s44319-025-00555-w [paper, data]
The NuRD component CHD3 promotes BMP signalling during cranial neural crest cell specification.
Journal: EMBO reports
Status: data only, 1 dataset cited
[663] doi:10.1098/rsos.242217 [paper, repository]
Juvenile hormone regulates the maturation of sexually dimorphic naive ethanol olfactory preference in &lt;i&gt;Drosophila melanogaster&lt;/i&gt;.
Journal: Royal Society open science
Authors' code: doi:10.6084/m9.figshare.c.7986634 (no license)
Status: code found, still to be checked
[664] doi:10.1162/imag.a.115 [paper, repository]
High resolution diffusion tensor imaging of the human cortex reveals non-linear trajectories over the healthy lifespan.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: grahamlittlephd/MicroBrain (no license)
Status: code verified, 20 files readable, 4 matches

Tuesday, 19 August 2025 (1 paper)

[665] doi:10.1073/pnas.2421095122 [paper, repository]
Altricial brains and the evolution of infant vocal learning.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: biagzi/altricial_brain_vocal_learning (MIT), OSF ynpqv (no license)
Status: code verified, 9 files readable, 7 matches

Saturday, 16 August 2025 (1 paper)

[666] doi:10.1556/2006.2025.00061 [paper, repository]
Neural responses to kills/deaths in real MOBA games are associated with addiction-related psychological traits and subjective pleasant/unpleasant experiences.
Journal: Journal of behavioral addictions
Authors' code: doi:10.5061/dryad.zpc866th0 (no license)
Status: code verified

Thursday, 14 August 2025 (2 papers)

[667] doi:10.3389/fped.2025.1531086 [paper, data]
Lenticulostriate vasculopathy in newborns: whole genome sequencing data analysis.
Journal: Frontiers in pediatrics
Status: data only, 1 dataset cited
[668] doi:10.1016/j.isci.2025.113373 [paper, repository]
Developmental trajectories predict dendritic remodeling after injury.
Journal: iScience
Authors' code: farrowlab/ChATbandsDetection_DLC (no license), farrowlab/Reinhard_2019 (GPL-3.0)
Status: code verified, 117 files readable, 1 match

Tuesday, 12 August 2025 (5 papers)

[669] doi:10.1038/s41598-025-14774-7 [paper, data]
Task-based functional connectivity in infants after exposure to regular white noise during natural sleep measured by fNIRS.
Journal: Scientific reports
Status: data only, 1 dataset cited
[670] doi:10.1007/s00429-025-02994-6 [paper, repository]
Gray matter abnormalities in sight deprivation and sight restoration.
Journal: Brain structure & function
Authors' code: OSF brsp2 (no license)
Status: code verified, 13 files readable, 6 matches
[671] doi:10.1038/s41467-025-62812-9 [paper, repository]
Mapping the coupling between tract reachability and cortical geometry of the human brain.
Journal: Nature communications
Status: code verified, 2,485 files readable, 11 matches
[672] doi:10.1038/s41398-025-03485-2 [paper]
The effects of the COVID-19 pandemic on neurobiological functioning in adolescents.
Journal: Translational psychiatry
Status: code on request
[673] doi:10.3390/ijms26167783 [paper]
CO and NO Coordinate Developmental Neuron Migration.
Journal: International journal of molecular sciences
Status: code on request

Saturday, 9 August 2025 (1 paper)

[674] doi:10.1016/j.isci.2025.113335 [paper, data]
An evolutionarily conserved role for CTNNB1/β-CATENIN in regulating the development of the corpus callosum.
Journal: iScience
Status: code on request, 1 dataset cited

Friday, 8 August 2025 (3 papers)

[675] doi:10.1038/s42003-025-08532-8 [paper, data]
Regulation of cortical neurogenesis by MED13L via transcriptional priming and its implications for MED13L syndrome.
Journal: Communications biology
Status: data only, 1 dataset cited
[676] doi:10.1007/s00247-025-06347-7 [paper, repository]
Biometry and volumetry in multi-centric fetal brain magnetic resonance imaging: assessing the bias of super-resolution reconstruction.
Journal: Pediatric radiology
Authors' code: Zenodo 7612119 (BSD-3-Clause), medical-image-analysis-laboratory/mialsuperresolutiontoolkit (BSD-3-Clause)
Status: code verified, 378 files readable, 2 matches
[677] doi:10.1038/s41380-025-03142-6 [paper, repository]
Brain structure characteristics in children with attention-deficit/hyperactivity disorder elucidated using traveling-subject harmonization.
Journal: Molecular psychiatry
Authors' code: OSF 6ay5q (no license)
Status: code verified, 12 files readable, 2 matches

Thursday, 7 August 2025 (1 paper)

[678] doi:10.1016/j.dcn.2025.101601 [paper, data]
Electrophysiological decoding captures the temporal trajectory of face categorization in infants.
Journal: Developmental cognitive neuroscience
Status: data only, 1 dataset cited

Wednesday, 6 August 2025 (2 papers)

[679] doi:10.1126/sciadv.adv2657 [paper, data]
Acquisition of neural crest promoted thyroid evolution from chordate endostyle.
Journal: Science advances
Status: data only, 1 dataset cited
[680] doi:10.1186/s13073-025-01513-w [paper, repository]
Contribution of rare coding variants to microcephaly in individuals with neurodevelopmental disorders.
Journal: Genome medicine
Authors' code: broadinstitute.github.io/warp (no license)
Status: code verified

Tuesday, 5 August 2025 (2 papers)

[681] doi:10.1371/journal.pone.0327493 [paper, data]
Partial FAM19A5 deficiency in mice leads to disrupted spine maturation, hyperactivity, and an altered fear response.
Journal: PloS one
Status: data only, 2 datasets cited
[682] doi:10.1038/s41598-025-11281-7 [paper, data]
Numerical format integration in primary school children examined with frequency-tagged electroencephalography.
Journal: Scientific reports
Status: data only, 1 dataset cited

Friday, 1 August 2025 (2 papers)

[683] doi:10.1101/gr.279584.124 [paper, data]
A map of enhancer regions in primary human neural progenitor cells using capture STARR-seq.
Journal: Genome research
Status: data only, 1 dataset cited
[684] doi:10.1002/jdn.70044 [paper, data]
PGAP1-Related Encephalopathy in an Infant With Neurodevelopmental Delay: Novel Variant and Review of Literature.
Journal: International journal of developmental neuroscience : the official journal of the International Society for Developmental Neuroscience
Status: data only, 1 dataset cited

Wednesday, 30 July 2025 (5 papers)

[685] doi:10.1523/eneuro.0430-24.2025 [paper, repository]
Examining Relationships between Functional and Structural Brain Network Architecture, Age, and Attention Skills in Early Childhood.
Journal: eNeuro
Status: code verified, 13 files readable, 4 matches
[686] doi:10.1016/j.mex.2025.103546 [paper, data]
Visual and motor skills development in preterm and full-term infants: A protocol for longitudinal data collection.
Journal: MethodsX
Status: data only, 1 dataset cited
[687] doi:10.3389/fnins.2025.1604545 [paper, repository]
Equivariant spherical CNNs for accurate fiber orientation distribution estimation in neonatal diffusion MRI with reduced acquisition time.
Journal: Frontiers in neuroscience
Authors' code: H-Snoussi/sCNN-FOD-neonatal (GPL-3.0)
Status: code verified, 15 files readable, 10 matches
[688] doi:10.1016/j.isci.2025.113237 [paper, data]
Biomarkers for early detection and monitoring of abnormal brain development in mild fetal growth restriction.
Journal: iScience
Status: code on request, 1 dataset cited
[689] doi:10.1016/j.bpsgos.2025.100576 [paper, data]
Decreased Cerebral Blood Flow in Young Children With Prenatal Alcohol Exposure.
Journal: Biological psychiatry global open science
Status: data only, 1 dataset cited

Monday, 28 July 2025 (1 paper)

[690] doi:10.1073/pnas.2504172122 [paper, repository]
General anesthesia in early infancy accelerates visual cortical development.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: OSF 4aw53 (no license)
Status: empty repository

Saturday, 26 July 2025 (2 papers)

[691] doi:10.1038/s41540-025-00563-5 [paper, repository]
Unraveling regulatory feedback mechanisms in adult neurogenesis through mathematical modelling.
Journal: NPJ systems biology and applications
Authors' code: Zenodo 14944969 (CC-BY-4.0)
Status: code verified, 9 files readable, 7 matches
[692] doi:10.1038/s41598-025-13363-y [paper]
White matter microstructure abnormalities in children experiencing neglect without other forms of maltreatment.
Journal: Scientific reports
Status: code on request

Friday, 25 July 2025 (2 papers)

[693] doi:10.7554/elife.97125 [paper, repository]
Cingulate cortex shapes early postnatal development of social vocalizations.
Journal: eLife
Status: code verified, 18 files readable, 7 matches
[694] doi:10.1016/j.celrep.2025.116029 [paper, repository]
Transformation of radial glia into postnatal neural stem cells depends on birth.
Journal: Cell reports
Authors' code: khodosevichlab/preterm_project_2_code_repo (no license), kharchenkolab/cacoa (no license)
Status: code verified, 24 files readable, 4 matches

Thursday, 24 July 2025 (4 papers)

[695] doi:10.1038/s41598-025-05846-9 [paper, repository]
Neural responses to peers moderate conversation-drinking associations in daily life.
Journal: Scientific reports
Authors' code: miajov/brain-responses---peer-influence (no license), dalejn/cleanBib (MIT)
Status: code verified, 12 files readable, 2 matches
[696] doi:10.1002/erv.70018 [paper]
GDF15 Is Elevated in Eating Disorders and Is Involved in the Gut-Brain Axis via Ghrelin.
Journal: European eating disorders review : the journal of the Eating Disorders Association
Status: code on request
[697] doi:10.1162/imag.a.87 [paper, repository]
Functional organization of the neonatal thalamus across development depicted by functional MRI.
Journal: Imaging neuroscience (Cambridge, Mass.)
Status: code verified, 7 files readable, 2 matches
[698] doi:10.1016/j.isci.2025.113078 [paper]
Environmental stress promotes the persistence of juvenile traits in olfactory neurons as a protective mechanism.
Journal: iScience
Status: code on request

Wednesday, 23 July 2025 (3 papers)

[699] doi:10.1038/s42003-025-08502-0 [paper, repository]
Melanocytes and photosensory organs share a common ancestry that illuminates the origins of the neural crest.
Journal: Communications biology
Authors' code: fateevajulia/RPE-Melanocytes_notebooks (no license)
Status: code verified, 19 files readable, 4 matches
[700] doi:10.1073/pnas.2424315122 [paper, data]
SETDB1 ensures the continuity of embryonic to adult neural stem cells through metabolic alterations in the dentate gyrus.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited
[701] doi:10.1016/j.dcn.2025.101599 [paper, data]
The development of semantic integration in bilingual toddlers measured by N400.
Journal: Developmental cognitive neuroscience
Status: data only, 1 dataset cited

Tuesday, 22 July 2025 (2 papers)

[702] doi:10.1038/s41598-025-11350-x [paper, repository]
Associations between epigenetic age and brain age in young people.
Journal: Scientific reports
Authors' code: yiluyucheng/dnaMethyAge (no license)
Status: code verified, 12 files readable, 2 matches
[703] doi:10.1016/j.isci.2025.113145 [paper, repository]
Sex differences in visually guided orienting behavior emerges during adolescence in mice.
Journal: iScience
Authors' code: nielllab/niell-lab-analysis (no license)
Status: code verified, 1,629 files readable

Monday, 21 July 2025 (2 papers)

[704] doi:10.1038/s42003-025-08509-7 [paper, repository]
Development of areal-level individualized homologous functional parcellations in youth.
Journal: Communications biology
Authors' code: BIT-YangLab/IHFPs (no license), thomasyeolab/cbig (MIT), Washington-University/HCPpipelines (BSD-2-Clause), MidnightScanClub (no license), ecr05/MSM_HOCR (no license)
Status: code verified, 2,578 files readable, 11 matches
[705] doi:10.1038/s41467-025-62003-6 [paper, data]
Determination of trunk neural crest cell fate and susceptibility to splicing perturbation by the DLC1-SF3B1-PHF5A splicing complex.
Journal: Nature communications
Status: data only, 2 datasets cited

Saturday, 19 July 2025 (2 papers)

[706] doi:10.1038/s41467-025-60895-y [paper, data]
Prdm16 regulates the postnatal fate of embryonic radial glia via Vcam1-dependent mechanisms.
Journal: Nature communications
Status: data only, 1 dataset cited
[707] doi:10.3390/jof11070539 [paper, data]
Human Brain Organoids: A New Model to Study &lt;i&gt;Cryptococcus neoformans&lt;/i&gt; Neurotropism.
Journal: Journal of fungi (Basel, Switzerland)
Status: data only, 1 dataset cited

Friday, 18 July 2025 (1 paper)

[708] doi:10.1038/s41551-025-01454-0 [paper, repository]
A pattern-learning algorithm associates copy number variations with brain structure and behavioural variables in an adolescent population cohort.
Journal: Nature biomedical engineering
Authors' code: labjacquemont/MIND-GENESPARALLELCNV (no license), ucscGenomeBrowser/kent (MIT), labjacquemont/DigCNV (GPL-3.0), jakubkopal/CNV-covariance (MIT), Zenodo 15229008 (MIT), jakubkopal/cnv-convergence (MIT)
Status: code verified, 2,055 files readable

Thursday, 17 July 2025 (1 paper)

[709] doi:10.1038/s41398-025-03467-4 [paper, repository]
Neural correlates differ between crystallized and fluid intelligence in adolescents.
Journal: Translational psychiatry
Authors' code: netneurolab/abagen (BSD-3-Clause), juryxy/juspace (no license)
Status: code verified, 76 files readable, 1 match

Wednesday, 16 July 2025 (3 papers)

[710] doi:10.1002/advs.202417644 [paper, repository]
Aging and the Spectral Properties of Brain Hemodynamics.
Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)
Authors' code: robbisg/4dfp_tools (no license)
Status: code verified, 219 files readable, 1 match
[711] doi:10.1038/s41467-025-61786-y [paper, data]
LIN-39 is a neuron-specific developmental determinant of longevity in Caenorhabditis elegans with reduced insulin signaling.
Journal: Nature communications
Status: data only, 1 dataset cited
[712] doi:10.1038/s41380-025-03117-7 [paper]
Multivariate patterns linking brain microstructure to temperament and behavior in adolescent eating disorders.
Journal: Molecular psychiatry
Status: code on request

Tuesday, 15 July 2025 (1 paper)

[713] doi:10.1038/s42003-025-08385-1 [paper, data]
Deciphering the role of CAPZA2 in neurodevelopmental disorders: insights from mouse models.
Journal: Communications biology
Status: data only, 1 dataset cited

Monday, 14 July 2025 (3 papers)

[714] doi:10.1371/journal.pgen.1011748 [paper, data]
Semaphorin 3f and post-embryonic regulation of retinal progenitors.
Journal: PLoS genetics
Status: data only, 1 dataset cited
[715] doi:10.1038/s41467-025-61881-0 [paper, data]
Phase separated condensates of ATRX regulate neural progenitor identity.
Journal: Nature communications
Status: data only, 1 dataset cited
[716] doi:10.1038/s41593-025-01987-2 [paper, repository]
An expanded subventricular zone supports postnatal cortical interneuron migration in gyrencephalic brains.
Journal: Nature neuroscience
Authors' code: aunoyp/arc (MIT)
Status: code verified, 29 files readable, 17 matches

Friday, 11 July 2025 (3 papers)

[717] doi:10.1371/journal.pdig.0000890 [paper, repository]
Short-horizon neonatal seizure prediction using EEG-based deep learning.
Journal: PLOS digital health
Authors' code: dbernardo05/qeegfeats (BSD-3-Clause), dbernardo05/neoSeer (MIT)
Status: code verified, 26 files readable, 3 matches
[718] doi:10.1101/2025.07.11.664337 [paper]
The gut microbiota and sleep in infants: a focus on diurnal rhythmicity patterns
Journal: bioRxiv (preprint)
Status: code on request
[719] doi:10.1117/1.jbo.30.7.076004 [paper, repository]
Automatic photoacoustic monitoring of perinatal brain hypoxia with superior sagittal sinus detection.
Journal: Journal of biomedical optics
Authors' code: bcjiang/hypodetect (MIT)
Status: code verified, 8 files readable, 2 matches

Thursday, 10 July 2025 (3 papers)

[720] doi:10.1038/s41467-025-61465-y [paper, repository]
Functional development of the human cerebellum from birth to age five.
Journal: Nature communications
Authors' code: jdiedrichsen/suit (no license), xaviergp/littlebrain (Apache-2.0), maartenmennes/ICA-AROMA (Apache-2.0)
Status: code verified, 54 files readable, 6 matches
[721] doi:10.1038/s41419-025-07815-6 [paper, data]
Rb substantially compensates for the double loss of p130 and p107 in adult but not embryonic neural stem cell lineages.
Journal: Cell death & disease
Status: data only, 1 dataset cited
[722] doi:10.7717/peerj-cs.3000 [paper, repository]
Effective classification for neonatal brain injury using EEG feature selection based on elastic net regression and improved crow search algorithm.
Journal: PeerJ. Computer science
Authors' code: supp:PMC12453842/peerj-cs-11-3000-s010.py (no license)
Status: code verified, 1 file readable, 1 match

Wednesday, 9 July 2025 (1 paper)

[723] doi:10.1098/rsos.250430 [paper, repository]
The domestication of the wolf larynx-testing the neural crest connection.
Journal: Royal Society open science
Authors' code: Zenodo 14967301 (MIT)
Status: code verified, 2 files readable, 4 matches

Tuesday, 8 July 2025 (3 papers)

[724] doi:10.1002/advs.202503768 [paper, data]
Multi-Region Brain Organoids Integrating Cerebral, Mid-Hindbrain, and Endothelial Systems.
Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)
Status: data only, 1 dataset cited
[725] doi:10.1038/s41598-025-02010-1 [paper]
CLN3 disease disrupts very early postnatal hippocampal maturation.
Journal: Scientific reports
Status: code on request
[726] doi:10.1038/s41593-025-01999-y [paper, repository]
Temporal control of progenitor competence shapes maturation in GABAergic neuron development in mice.
Journal: Nature neuroscience
Authors' code: mayer-lab/bright-et-al-2025 (no license), Zenodo 15195253 (CC-BY-4.0), Zenodo 15195252 (CC-BY-4.0)
Status: code verified, 72 files readable, 28 matches

Monday, 7 July 2025 (1 paper)

[727] doi:10.1162/imag.a.65 [paper, repository]
Altered brain state dynamics between preterm and term-born infants.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: srd49/dbi (no license)
Status: code verified, 10 files readable, 2 matches

Friday, 4 July 2025 (1 paper)

[728] doi:10.1002/jcv2.70023 [paper]
Genetic and environmental influences on sleep quality, ability to settle, and crying duration in 2- and 5-month-old infants: A longitudinal twin study.
Journal: JCPP advances
Status: code on request

Thursday, 3 July 2025 (2 papers)

[729] doi:10.1016/j.stemcr.2025.102575 [paper, repository]
Progenitor neighborhoods function as transient niches to sustain olfactory neurogenesis.
Journal: Stem cell reports
Authors' code: alifarhat40/bioacme (no license)
Status: code verified, 48 files readable
[730] doi:10.1016/j.eurox.2025.100417 [paper, repository]
Fetal MRI study of brain differences in early-onset fetal growth restriction versus healthy controls at 30 weeks of gestation.
Journal: European journal of obstetrics & gynecology and reproductive biology: X
Authors' code: OSF v3s7t (no license)
Status: empty repository

Wednesday, 2 July 2025 (1 paper)

[731] doi:10.1038/s41398-025-03441-0 [paper, repository]
Beyond homogeneity: charting the landscape of heterogeneity in neurodevelopmental and psychiatric electroencephalography.
Journal: Translational psychiatry
Authors' code: MINDIG-1/NM-Psy (no license)
Status: code verified, 10 files readable, 2 matches

Tuesday, 1 July 2025 (9 papers)

[732] doi:10.1093/g3journal/jkaf099 [paper, repository]
Systems genetics reveals the influence of expression QTLs in mouse embryonic stem cells on transcriptional variation later in differentiated neural progenitor cells.
Journal: G3 (Bethesda, Md.)
Authors' code: simecek/intermediate (no license)
Status: code verified, 8 files readable, 1 match
[733] doi:10.1101/gad.352632.125 [paper, repository]
TEAD switches interacting partners along neural progenitor lineage progression to execute distinct functions.
Journal: Genes & development
Status: empty repository, 2 files readable
[734] doi:10.1093/g3journal/jkaf115 [paper, repository]
Disrupted development of sensory systems and the cerebellum in a zebrafish ebf3a mutant.
Journal: G3 (Bethesda, Md.)
Authors' code: thymelab/ZebrafishBehavior (MIT), thymelab/DownstreamAnalysis (MIT), thymelab (no license)
Status: code verified, 31 files readable, 5 matches
[735] doi:10.1111/desc.70037 [paper]
The Neural Reality of Pitch Chroma in Early Infancy.
Journal: Developmental science
Status: code on request
[736] doi:10.3758/s13415-025-01323-y [paper, repository]
Sleepiness but neither fluid nor crystallized intelligence can be predicted from resting-state electroencephalography - Evidence from the large scale CoScience EEG-Personality Project.
Journal: Cognitive, affective & behavioral neuroscience
Authors' code: OSF g89b2 (no license), christoph1212/MVPA_IQ (no license)
Status: code verified, 182 files readable, 7 matches
[737] doi:10.1038/s41467-025-60686-5 [paper, repository]
Genetic risk predicts adolescent mood pathology via sexual differentiation of brain function and physiological aging.
Journal: Nature communications
Authors' code: McIntosh-Lab/PLS (Apache-2.0)
Status: code verified, 365 files readable
[738] doi:10.1038/s41467-025-60775-5 [paper, data]
RFC1 regulates the expansion of neural progenitors in the developing zebrafish cerebellum.
Journal: Nature communications
Status: data only, 2 datasets cited
[739] doi:10.1001/jamanetworkopen.2025.28532 [paper, repository]
Psychopathology and Gaming Disorder in Adolescents.
Journal: JAMA network open
Authors' code: OSF jkw3e (no license)
Status: empty repository
[740] doi:10.1117/1.nph.12.3.035016 [paper, repository]
Brain network evolution in late preterm to term infants: a near-infrared spectroscopy imaging study.
Journal: Neurophotonics
Authors' code: OSF 9jnfd (no license)
Status: code verified, 4 files readable, 1 match

Monday, 30 June 2025 (5 papers)

[741] doi:10.1017/s0033291725100779 [paper]
Parental psychopathology, family conflict, brain function, and child autistic-like traits in early adolescents.
Journal: Psychological medicine
Status: code on request
[742] doi:10.1002/advs.202503017 [paper, repository]
Parvalbumin Interneuron-Dependent Hippocampal Neurogenesis Evoked by Prolonged Rhythmic Light Flicker.
Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)
Authors' code: djamesbarker/pMAT (GPL-3.0)
Status: code verified, 35 files readable, 5 matches
[743] doi:10.1177/13872877251352119 [paper, data]
Electroencephalogram features support the retrogenesis hypothesis of Alzheimer's disease: Exploratory comparison of brain changes in aging and childhood.
Journal: Journal of Alzheimer's disease : JAD
Status: data only, 2 datasets cited
[744] doi:10.1128/mbio.00835-25 [paper, repository]
Codevelopment of gut microbial metabolism and visual neural circuitry over human infancy.
Journal: mBio
Authors' code: Zenodo 13625448 (CC-BY-4.0), klepac-ceraj-lab/eegmicrobiome (no license)
Status: code verified, 43 files readable, 7 matches
[745] doi:10.3389/frmbi.2025.1628819 [paper, repository]
Gut microbiota diversity is altered in a sex-dependent manner in Shank3B heterozygote mice.
Journal: Frontiers in microbiomes
Status: code verified, 2 files readable, 3 matches

Saturday, 28 June 2025 (1 paper)

[746] doi:10.1002/uog.29271 [paper, repository]
Cord blood levels of insulin-like growth factor-1 and insulin-like growth factor binding protein-3 correlate with perinatal brain development in fetal congenital heart disease.
Journal: Ultrasound in obstetrics & gynecology : the official journal of the International Society of Ultrasound in Obstetrics and Gynecology
Authors' code: SVRTK/auto-proc-svrtk (GPL-3.0)
Status: code verified, 61 files readable, 1 match

Friday, 27 June 2025 (2 papers)

[747] doi:10.1162/netn_a_00451 [paper, repository]
A graph neural network approach to investigate brain critical states over neurodevelopment.
Journal: Network neuroscience (Cambridge, Mass.)
Authors' code: Rodrigo-Motta/BRAIN_ISING_GNN (MIT)
Status: code verified, 13 files readable, 3 matches
[748] doi:10.1162/imag.a.59 [paper, repository]
Spatiotemporal dynamics of EEG microstate networks over the first two years of life: A multi-cohort longitudinal study.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: pine-lab/happe (GPL-3.0)
Status: code verified, 2,000 files readable, 6 matches

Thursday, 26 June 2025 (3 papers)

[749] doi:10.1371/journal.pone.0325844 [paper, repository]
Groupwise registration of infant brain diffusion tensor images using intermediate subgroup templates.
Journal: PloS one
Authors' code: Luckykathy6/groupwiseRegister (no license)
Status: code verified, 5 files readable, 1 match
[750] doi:10.1371/journal.pone.0326542 [paper, data]
A mixed methods exploration of motor imagery in autistic and non-autistic adults: Diverse experiences and implications for interventions.
Journal: PloS one
Status: data only, 1 dataset cited
[751] doi:10.21203/rs.3.rs-6864753/v1 [paper, repository]
Lifespan investigation of brain volumetric changes associated with substance use disorders
Journal: Research Square (preprint)
Authors' code: LeonDLotter/CTdev (CC-BY-NC-SA-4.0), saigegit/SAIGE (GPL-3.0), xm1701/bcprs (no license), precimed/pleiofdr (GPL-3.0)
Status: code verified, 137 files readable, 7 matches

Monday, 23 June 2025 (1 paper)

[752] doi:10.3389/fcell.2025.1612177 [paper]
Rnd3 deletion affects neuroblast behavior through the RhoA/ROCK pathway but not neural stem cells in postnatal mice subventricular zone.
Journal: Frontiers in cell and developmental biology
Status: data only

Saturday, 21 June 2025 (1 paper)

[753] doi:10.1101/2025.06.20.660741 [paper, repository]
MRI-Based Structural Development of the Human Newborn Hypothalamus
Journal: bioRxiv (preprint)
Authors' code: jerodras/neonate_hypothalamus_seg (GPL-3.0), jerodras (no license)
Status: code verified, 5 files readable, 1 match

Friday, 20 June 2025 (1 paper)

[754] doi:10.1186/s11689-025-09626-4 [paper, data]
Common and rare variant analyses implicate late-infancy cerebellar development and immune genes in ADHD.
Journal: Journal of neurodevelopmental disorders
Status: data only, 1 dataset cited

Thursday, 19 June 2025 (2 papers)

[755] doi:10.1192/bjp.2025.135 [paper, repository]
Reproducible sex differences in personalised functional network topography in youth.
Journal: The British journal of psychiatry : the journal of mental science
Status: code verified
[756] doi:10.1016/j.stemcr.2025.102537 [paper, repository]
APOE4 impacts cortical neurodevelopment and alters network formation in human brain organoids.
Journal: Stem cell reports
Authors' code: mgiugliano/SPiQ (CC0-1.0)
Status: code verified, 14 files readable

Wednesday, 18 June 2025 (5 papers)

[757] doi:10.7554/elife.96152 [paper, data]
In mice, discrete odors can selectively promote the neurogenesis of sensory neuron subtypes that they stimulate.
Journal: eLife
Status: data only, 1 dataset cited
[758] doi:10.1038/s41586-025-09151-3 [paper, repository]
Morphodynamics of human early brain organoid development.
Journal: Nature
Authors' code: morphometrics/morphometrics (BSD-3-Clause), quadbio/morphodynamics_human_brain_organoid (MIT), Zenodo 15149153 (MIT), Zenodo 15149154 (CC-BY-4.0)
Status: code verified, 432 files readable, 40 matches
[759] doi:10.1101/2025.06.17.659820 [paper, repository]
Population-specific brain charts reveal Chinese-Western differences in neurodevelopmental trajectories
Journal: bioRxiv (preprint)
Status: code verified, 1,363 files readable, 7 matches
[760] doi:10.1016/j.nicl.2025.103828 [paper, repository]
The relationship between brain perfusion and structure in youth with obesity, with and without type 2 diabetes: A pilot study.
Journal: NeuroImage. Clinical
Authors' code: markallenthornton/MatlabTFCE (MIT)
Status: code verified, 57 files readable, 3 matches
[761] doi:10.31083/ap43988 [paper]
Network Specificity in Predicting Childhood Trauma Characteristics Using Effective Connectivity.
Journal: Alpha psychiatry
Status: code on request

Tuesday, 17 June 2025 (1 paper)

[762] doi:10.1073/pnas.2422281122 [paper, repository]
Linking pregnancy- and birth-related risk factors to a multivariate fusion of child cortical structure.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: OSF xeufj (no license)
Status: code verified, 24 files readable, 9 matches

Monday, 16 June 2025 (1 paper)

[763] doi:10.1016/j.dcn.2025.101585 [paper, repository]
Fetal functional connectivity: Examining the role of prenatal maternal depression symptoms using graph theory.
Journal: Developmental cognitive neuroscience
Authors' code: Zenodo 13905954 (CC-BY-4.0)
Status: code verified

Thursday, 12 June 2025 (2 papers)

[764] doi:10.1371/journal.pntd.0013088 [paper, data]
Does schistosome infection affect behavior through the gut-brain axis?
Journal: PLoS neglected tropical diseases
Status: data only, 1 dataset cited
[765] doi:10.1155/ghe3/4427791 [paper]
A Multilevel Analysis of the Association Between Quality of Antenatal Care and Folic Acid Supplementation During Pregnancy Among Guatemalan Women.
Journal: Global health, epidemiology and genomics
Status: code on request

Wednesday, 11 June 2025 (2 papers)

[766] doi:10.1371/journal.pone.0324802 [paper, repository]
Math skills and microstructure of the middle longitudinal fasciculus: A developmental investigation.
Journal: PloS one
Authors' code: irinabuianova/pmt (no license)
Status: code verified, 2 files readable
[767] doi:10.1101/2025.06.10.25328994 [paper, repository]
Preterm birth, socioeconomic status, and white matter development across childhood
Journal: medRxiv (preprint)
Authors' code: OSF bq5cd (no license)
Status: empty repository

Tuesday, 10 June 2025 (1 paper)

[768] doi:10.1073/pnas.2414598122 [paper, repository]
Longitudinal trajectories of brain development from infancy to school age and their relationship with literacy development.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: code verified, 67 files readable, 14 matches

Saturday, 7 June 2025 (1 paper)

[769] doi:10.1016/j.physbeh.2025.114987 [paper, data]
Effects of adolescent morphine exposure on brain stimulation reward sensitivity and dopamine neuron excitability.
Journal: Physiology & behavior
Status: data only, 1 dataset cited

Friday, 6 June 2025 (2 papers)

[770] doi:10.1016/j.neuron.2025.05.016 [paper, data]
Neurodevelopmental origins of structural and psychomotor defects in CXCR4-linked primary immunodeficiency.
Journal: Neuron
Status: code on request, 1 dataset cited
[771] doi:10.1162/imag.a.27 [paper, repository]
Perception of social experiences and cortical thickness change together throughout early adolescence: Findings from the ABCD cohort.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: OSF cmpnz (no license)
Status: code verified, 1 file readable, 1 match

Thursday, 5 June 2025 (4 papers)

[772] doi:10.1017/s0954579425100229 [paper, repository]
Longitudinal associations between the infant gut microbiome and negative affect in toddlerhood.
Journal: Development and psychopathology
Authors' code: OSF gnwzv (no license)
Status: code verified, 2 files readable
[773] doi:10.1128/spectrum.02536-24 [paper, data]
Gut microbiota regulates the brain metabolism of sexually mature drones.
Journal: Microbiology spectrum
Status: data only, 2 datasets cited
[774] doi:10.1371/journal.pone.0325248 [paper, data]
Variants in Lrrk2 and Snca deficiency do not alter the course of primary encephalitis due to neurotropic reovirus T3D in newborn mice.
Journal: PloS one
Status: data only, 1 dataset cited
[775] doi:10.1038/s41562-025-02191-9 [paper, repository]
Protracted development of gaze behaviour.
Journal: Nature human behaviour
Authors' code: OSF ycrav (no license)
Status: code verified

Wednesday, 4 June 2025 (3 papers)

[776] doi:10.1126/sciadv.adr8164 [paper, repository]
Adolescent maturation of cortical excitation-inhibition ratio based on individualized biophysical network modeling.
Journal: Science advances
Authors' code: cubnm.readthedocs.io (no license), amnsbr/bnm_cuda (no license), amnsbr/eidev (no license), Zenodo 12097081 (CC-BY-4.0), Zenodo 12097805 (CC-BY-4.0), Zenodo 14246606 (CC-BY-4.0)
Status: code verified, 336 files readable, 18 matches
[777] doi:10.1038/s41467-025-59659-5 [paper, repository]
Perinatal serotonin signalling dynamically influences the development of cortical GABAergic circuits with consequences for lifelong sensory encoding.
Journal: Nature communications
Authors' code: Butt-lab (no license)
Status: code verified
[778] doi:10.3390/brainsci15060607 [paper, data]
The Role of the Sentence Constraint in New Word Acquisition While Reading in Adolescents: The ERP N400 and P600 and Reading-Related Skills.
Journal: Brain sciences
Status: data only, 1 dataset cited

Tuesday, 3 June 2025 (4 papers)

[779] doi:10.1038/s41467-025-60435-8 [paper, repository]
Three dimensional multiscalar neurovascular nephron connectivity map of the human kidney across the lifespan.
Journal: Nature communications
Authors' code: JainLabWUSM/lightsheetsubmission (CC-BY-NC-SA-4.0), pypi.org/project/nettracer3d (no license), codeocean:0676884 (no license)
Status: code verified, 28 files readable, 20 matches
[780] doi:10.1038/s41522-025-00737-3 [paper]
TSP50 deficiency in neural stem cells aggravates colitis in mice by altering intestinal microbiome.
Journal: NPJ biofilms and microbiomes
Status: data only
[781] doi:10.1038/s41467-025-60361-9 [paper, repository]
Sequential emergence and contraction of epithelial subtypes in the prenatal human choroid plexus revealed by a stem cell model.
Journal: Nature communications
Authors' code: jinworks/CellChat (GPL-3.0), satijalab.org/seurat/articles (no license), wagnerde/STITCH (BSD-2-Clause), wangshuxiong/soptsc (MIT)
Status: code verified, 310 files readable, 6 matches
[782] doi:10.1038/s41467-025-60187-5 [paper]
Forebrain neural progenitors effectively integrate into host brain circuits and improve neural function after ischemic stroke.
Journal: Nature communications
Status: data only

Monday, 2 June 2025 (1 paper)

[783] doi:10.1073/pnas.2412729122 [paper, repository]
Structure-function coupling in the first month of life: Associations with age and attention.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: code verified, 7 files readable, 12 matches

Sunday, 1 June 2025 (4 papers)

[784] doi:10.1002/nbm.70065 [paper, repository]
Assessing Semiregional Cerebral Oxygen Consumption (CMRO&lt;sub&gt;2&lt;/sub&gt;) in Preterm Neonates: A Quantitative MRI Cohort Study With Exploratory Analysis of Respiratory Support.
Journal: NMR in biomedicine
Authors' code: WeberLab/CMRO2 (no license), kamesy/QSM.m (MIT)
Status: code verified, 177 files readable, 8 matches
[785] doi:10.1111/cdev.14258 [paper]
EEG N1 Specialization to Print in Chinese Primary School Students: Developmental Trajectories, Longitudinal Changes, and Individual Differences.
Journal: Child development
Status: code on request
[786] doi:10.1093/cercor/bhaf143 [paper, repository]
Genetic and environmental contributions to ReHo and fALFF in early adolescence vary across brain regions.
Journal: Cerebral cortex (New York, N.Y. : 1991)
Authors' code: strikel/ReHo_fALFF_heritability (no license)
Status: code verified, 7 files readable, 4 matches
[787] doi:10.1093/cercor/bhaf154 [paper, repository]
Multiscale cortical morphometry reveals pronounced regional and scale-dependent variations across the lifespan.
Journal: Cerebral cortex (New York, N.Y. : 1991)
Authors' code: cnnp-lab/corticalfoldinganalysistools (GPL-3.0)
Status: code verified, 772 files readable, 4 matches

Friday, 30 May 2025 (3 papers)

[788] doi:10.1038/s41467-025-60338-8 [paper, repository]
Transcriptomic insights into fate choice of pallial versus subpallial GABAergic neurons.
Journal: Nature communications
Authors' code: saketkc/pySCTransform (GPL-3.0), YiqunW/NMF (no license)
Status: code verified, 35 files readable, 6 matches
[789] doi:10.1159/000546675 [paper, data]
Cerebral Saturation and Fractional Tissue Oxygen Extraction Are Associated with Anterior Cerebral Artery Doppler Parameters in Neonates with Congenital Heart Defects.
Journal: Neonatology
Status: data only, 1 dataset cited
[790] doi:10.3389/fphys.2025.1572854 [paper, data]
Fecal or bacterial transplantation in mice transfer environment-induced brain plasticity and associated behavioral changes.
Journal: Frontiers in physiology
Status: data only, 1 dataset cited

Thursday, 29 May 2025 (3 papers)

[791] doi:10.1038/s41593-025-01962-x [paper, repository]
The transcriptomes, connections and development of submucosal neuron classes in the mouse small intestine.
Journal: Nature neuroscience
Status: code verified, 7 files readable, 5 matches
[792] doi:10.1016/j.dcn.2025.101576 [paper, repository]
Statistical learning of orthography-semantics regularities: A developmental neurophysiological study.
Journal: Developmental cognitive neuroscience
Authors' code: OSF kapy4 (no license)
Status: code verified, 3 files readable, 1 match
[793] doi:10.1016/j.envint.2025.109561 [paper, repository]
Fine particulate matter air pollution and longitudinal gray matter development changes during early adolescence: variation by neighborhood disadvantage level.
Journal: Environment international
Authors' code: figshare 29202749 (CC-BY-4.0)
Status: code verified, 1 file readable, 1 match

Wednesday, 28 May 2025 (3 papers)

[794] doi:10.1101/2025.05.28.25328476 [paper, repository]
Lifespan investigation of brain volumetric changes associated with substance use disorders
Journal: medRxiv (preprint)
Authors' code: LeonDLotter/CTdev (CC-BY-NC-SA-4.0), saigegit/SAIGE (GPL-3.0), xm1701/bcprs (no license), precimed/pleiofdr (GPL-3.0)
Status: code verified, 137 files readable, 7 matches
[795] doi:10.1507/endocrj.ej24-0723 [paper, data]
Effects of excessive iodine intake during the perinatal period on thyroid function and higher brain functions in mouse offspring.
Journal: Endocrine journal
Status: data only, 1 dataset cited
[796] doi:10.1016/j.crmeth.2025.101055 [paper, repository]
Quiescent horizontal basal stem cells act as a niche for olfactory neurogenesis in a mouse 3D organoid model.
Journal: Cell reports methods
Authors' code: scverse/scanpy (BSD-3-Clause), swolock/scrublet (MIT), saezlab/liana-py (BSD-3-Clause)
Status: code verified, 253 files readable, 2 matches

Tuesday, 27 May 2025 (1 paper)

[797] doi:10.1007/s00787-025-02745-2 [paper]
Developmental differences in threat learning are associated with changes in frontal-central theta activity.
Journal: European child & adolescent psychiatry
Status: code on request

Monday, 26 May 2025 (3 papers)

[798] doi:10.1080/03639045.2025.2508845 [paper, data]
Storage and in-use stability of an excipient enhanced growth (EEG) synthetic lung surfactant powder formulation.
Journal: Drug development and industrial pharmacy
Status: data only, 1 dataset cited
[799] doi:10.1038/s41598-025-00736-6 [paper, data]
Metacontrol-related aperiodic neural activity decreases but strategic adjustment thereof increases from childhood to adulthood.
Journal: Scientific reports
Status: data only, 1 dataset cited
[800] doi:10.1038/s42003-025-08155-z [paper, repository]
Burst of gyrification in the human brain after birth.
Journal: Communications biology
Authors' code: MecaLab/2025_folding_birth (MIT)
Status: code verified, 6 files readable, 2 matches

Thursday, 22 May 2025 (2 papers)

[801] doi:10.1038/s42003-025-08165-x [paper, repository]
Early life stress impairs hippocampal subfield myelination.
Journal: Communications biology
Authors' code: OSF 8hte3 (no license), khanlab/hippunfold (MIT)
Status: code verified, 68 files readable, 2 matches
[802] doi:10.3390/brainsci15060544 [paper]
Resting Electroencephalography Microstates and Alpha Power Modulation in Preschool-Aged Children with Autism Spectrum Disorder.
Journal: Brain sciences
Status: code on request

Wednesday, 21 May 2025 (3 papers)

[803] doi:10.1038/s42003-025-08216-3 [paper, repository]
Anterior-posterior systematic deficits of cortical thickness in early-onset schizophrenia.
Journal: Communications biology
Authors' code: Yun-Shuang/Structural-covariance-gradient-SZ (no license), scottclowe/cbrewer2 (Apache-2.0)
Status: code verified, 13 files readable, 2 matches
[804] doi:10.1101/2025.05.19.653958 [paper, repository]
Differential patterns of cortical expansion in fetal and preterm brain development
Journal: bioRxiv (preprint)
Authors' code: marianaftsilva/cortical-growth (no license)
Status: code verified, 3 files readable
[805] doi:10.1016/j.xpro.2025.103836 [paper, repository]
Protocol to isolate dorsal root ganglion neurons from embryonic rats by immunopanning and characterize them using RNAscope and immunofluorescence.
Journal: STAR protocols
Authors' code: muellerflorian/fish_quant (no license)
Status: code verified, 482 files readable, 2 matches

Tuesday, 20 May 2025 (1 paper)

[806] doi:10.1093/pnasnexus/pgaf141 [paper, data]
Larger brains and relatively smaller cerebella in Asian elephants compared with African savanna elephants.
Journal: PNAS nexus
Status: data only, 2 datasets cited

Monday, 19 May 2025 (1 paper)

[807] doi:10.1186/s40168-025-02122-w [paper, repository]
Microbiota alterations leading to amino acid deficiency contribute to depression in children and adolescents.
Journal: Microbiome
Status: code verified, 1,189 files readable, 2 matches

Saturday, 17 May 2025 (1 paper)

[808] doi:10.47626/1516-4446-2025-4195 [paper, data]
Can socioeconomic status moderate the effect of a conflictive family environment on brain structure and externalizing/internalizing behavior in children and adolescents?
Journal: Revista brasileira de psiquiatria (Sao Paulo, Brazil : 1999)
Status: data only, 2 datasets cited

Friday, 16 May 2025 (2 papers)

[809] doi:10.1038/s41421-025-00798-w [paper, data]
Spatiotemporal 3D chromatin organization across multiple brain regions during human fetal development.
Journal: Cell discovery
Status: code on request, 1 dataset cited
[810] doi:10.1101/2025.05.14.25327512 [paper]
Age-Related Characteristics of SYT1-Associated Neurodevelopmental Disorder
Journal: medRxiv (preprint)
Status: code on request

Thursday, 15 May 2025 (1 paper)

[811] doi:10.1186/s40478-025-02029-5 [paper, data]
Shaking into deficits: investigating behavioural and neuropathological outcomes associated with a novel preclinical model of infant abusive head trauma.
Journal: Acta neuropathologica communications
Status: data only, 1 dataset cited

Wednesday, 14 May 2025 (2 papers)

[812] doi:10.1038/s41467-025-59110-9 [paper, repository]
Developing brain asymmetry shapes cognitive and psychiatric outcomes in adolescence.
Journal: Nature communications
Authors' code: xinranwu/ABCD_YoungAsym (no license)
Status: code verified, 3 files readable, 2 matches
[813] doi:10.1016/j.dcn.2025.101563 [paper, repository]
Missing data approaches for longitudinal neuroimaging research: Examples from the Adolescent Brain and Cognitive Development (ABCD) Study®.
Journal: Developmental cognitive neuroscience
Authors' code: OSF q8v5s (no license)
Status: code verified, 6 files readable, 9 matches

Tuesday, 13 May 2025 (1 paper)

[814] doi:10.1038/s42003-025-08082-z [paper, repository]
Emergence of a synergistic scaffold in the brains of human infants.
Journal: Communications biology
Status: code verified, 46 files readable, 3 matches

Sunday, 11 May 2025 (1 paper)

[815] doi:10.1113/jp287496 [paper, repository]
The contribution of age and sex hormones to female neuromuscular function across the adult lifespan.
Journal: The Journal of physiology
Authors' code: DaniHiam/NeuroMusc_FAME (no license)
Status: code verified, 2 files readable, 2 matches

Saturday, 10 May 2025 (2 papers)

[816] doi:10.1038/s41598-025-00679-y [paper, data]
Childhood abuse and neglect are differentially related to perceived discrimination and structural change in empathy-related circuitry.
Journal: Scientific reports
Status: data only, 1 dataset cited
[817] doi:10.3390/s25103007 [paper, repository]
Long-Term Neonatal EEG Modeling with DSP and ML for Grading Hypoxic-Ischemic Encephalopathy Injury.
Journal: Sensors (Basel, Switzerland)
Status: code verified, 3 files readable, 2 matches

Friday, 9 May 2025 (3 papers)

[818] doi:10.1186/s13059-025-03600-y [paper, repository]
Parent-of-origin regulation by maternal auts2 shapes neurodevelopment and behavior in fish.
Journal: Genome biology
Authors' code: cmerdrignac/auts2a (no license), figshare 1 (no license), Zenodo 15260183 (CC-BY-4.0), Zenodo 15260131 (GPL-3.0)
Status: code verified, 4 files readable, 3 matches
[819] doi:10.1016/j.xcrm.2025.102119 [paper, repository]
Multitrait GWAS of non-suicidal self-injury and the polygenetic effects on child psychopathology and brain structures.
Journal: Cell reports. Medicine
Authors' code: weizhouUMICH/SAIGE (LGPL-3.0), bulik/ldsc (GPL-3.0), omeed-maghzian/mtag (GPL-3.0), Iuliana-Ionita-Laza/CARMA (GPL-3.0), omerwe/polyfun (MIT)
Status: code verified, 2,121 files readable, 2 matches
[820] doi:10.1016/j.devcel.2025.04.010 [paper]
Differential tissue deformability underlies fluid pressure-driven shape divergence of the avian embryonic brain and spinal cord.
Journal: Developmental cell
Status: code on request

Thursday, 8 May 2025 (1 paper)

[821] doi:10.1073/pnas.2417445122 [paper, data]
DDX24 spatiotemporally orchestrates VEGF and Wnt signaling during developmental angiogenesis.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited

Wednesday, 7 May 2025 (1 paper)

[822] doi:10.1038/s41562-025-02145-1 [paper, repository]
Genome-wide association meta-analysis of age at onset of walking in over 70,000 infants of European ancestry.
Journal: Nature human behaviour
Status: code verified, 88 files readable, 5 matches

Tuesday, 6 May 2025 (2 papers)

[823] doi:10.1021/acssynbio.4c00742 [paper, repository]
Induced Neural Progenitor Specification from Human Pluripotent Stem Cells by a Refined Synthetic Notch Platform.
Journal: ACS synthetic biology
Authors' code: andrewkjar/SynNotch_scRNAseq (no license)
Status: code verified, 2 files readable
[824] doi:10.1016/j.isci.2025.112591 [paper]
The maternal vGluT2 and embryonic mGluR3 signaling relay system controls offspring wing dimorphism in pea aphid.
Journal: iScience
Status: code on request

Monday, 5 May 2025 (3 papers)

[825] doi:10.1371/journal.pone.0322795 [paper, repository]
The measurement of self-regulation in the Adolescent Brain Cognitive Development (ABCD) Study.
Journal: PloS one
Authors' code: OSF nzjf7 (no license)
Status: code verified, 2 files readable, 5 matches
[826] doi:10.1101/2025.05.04.649695 [paper, repository]
Development of Auditory and Spontaneous Movement Responses to Music over the First Postnatal Year
Journal: bioRxiv (preprint)
Authors' code: tnguyen1992/tinydancer (CC0-1.0)
Status: code verified, 65 files readable, 8 matches
[827] doi:10.1016/j.ajcnut.2025.04.032 [paper]
Maternal prenatal nut and seafood consumption and child neuropsychological function from 4 to 15 years of age: a population-based cohort study.
Journal: The American journal of clinical nutrition
Status: code on request

Saturday, 3 May 2025 (1 paper)

[828] doi:10.1101/2025.05.02.25326852 [paper, repository]
Genetic Heterogeneity and Homogeneity Among Orofacial Cleft Subtypes: Genome-Wide Association Studies in the Cleft Collective
Journal: medRxiv (preprint)
Authors' code: MRCIEU/ieugwasr (other)
Status: code verified, 24 files readable

Friday, 2 May 2025 (1 paper)

[829] doi:10.1016/j.isci.2025.112569 [paper, data]
Impact of ATF6 deletion on the embryonic brain development.
Journal: iScience
Status: code on request, 1 dataset cited

Thursday, 1 May 2025 (8 papers)

[830] doi:10.1111/desc.70009 [paper, repository]
Maternal Interaction Relates to Neural Processing of Self-Related Multisensory Information in 5-Month-Olds.
Journal: Developmental science
Authors' code: OSF sng5e (no license)
Status: code verified, 4 files readable, 2 matches
[831] doi:10.1093/g3journal/jkaf049 [paper, data]
Arsenic impairs Drosophila neural stem cell mitotic progression and sleep behavior in a tauopathy model.
Journal: G3 (Bethesda, Md.)
Status: data only, 1 dataset cited
[832] doi:10.1242/dev.204369 [paper, repository]
N-cadherin facilitates trigeminal sensory neuron outgrowth and target tissue innervation.
Journal: Development (Cambridge, England)
Authors' code: Zenodo 15257825 (CC-BY-4.0), Zenodo 15257824 (CC-BY-4.0)
Status: code verified, 2 files readable
[833] doi:10.1002/cne.70056 [paper, data]
Ontogenetic Changes in Endocranial Anatomy in Gorgosaurus libratus (Theropoda: Tyrannosauridae) Provide Insight Into the Evolution of the Tyrannosauroid Endocranium.
Journal: The Journal of comparative neurology
Status: data only, 1 dataset cited
[834] doi:10.1038/s41467-025-59252-w [paper, repository]
Altered extracellular matrix structure and elevated stiffness in a brain organoid model for disease.
Journal: Nature communications
Authors' code: Zenodo 15028450 (GPL-3.0), jenschwarz/cellsfibers2dmechanicalmodel (GPL-3.0)
Status: code verified, 8 files readable
[835] doi:10.1002/jdn.70021 [paper, data]
Impact of Prematurity and Neonatal Complications on the Development of Dyslexia.
Journal: International journal of developmental neuroscience : the official journal of the International Society for Developmental Neuroscience
Status: data only, 1 dataset cited
[836] doi:10.1111/adb.70040 [paper, data]
Abnormal Cortical Thickness Development in Young Adults With Heavy Cannabis Use: A Longitudinal Study.
Journal: Addiction biology
Status: data only, 1 dataset cited
[837] doi:10.1111/infa.70026 [paper, repository]
Neural Representations of Grasp Congruence During the Emergence of Precision Grasping.
Journal: Infancy : the official journal of the International Society on Infant Studies
Authors' code: OSF 9xah3 (no license)
Status: code verified, 4 files readable

Wednesday, 30 April 2025 (3 papers)

[838] doi:10.1186/s13293-025-00712-9 [paper, repository]
Sex-specific DNA methylation signatures of autism spectrum disorder from whole genome bisulfite sequencing of newborn blood.
Journal: Biology of sex differences
Status: code verified, 28 files readable, 8 matches
[839] doi:10.1101/2025.04.29.25326627 [paper, repository]
Longitudinal development of sex differences in the limbic system is associated with age, puberty and mental health
Journal: medRxiv (preprint)
Authors' code: gloriamatte (no license)
Status: code verified
[840] doi:10.1016/j.biopsycho.2025.109043 [paper, repository]
Insular functional connectivity in autistic and non-autistic development.
Journal: Biological psychology
Authors' code: baxpr/connprep (no license), baxpr/conncalc (no license)
Status: code verified, 87 files readable, 1 match

Monday, 28 April 2025 (1 paper)

[841] doi:10.1016/j.bbrep.2025.102026 [paper, data]
High-resolution transcriptome analysis on a mouse model of neonatal hypoxic-ischemic encephalopathy using single-nucleus RNA-seq.
Journal: Biochemistry and biophysics reports
Status: data only, 1 dataset cited

Friday, 25 April 2025 (3 papers)

[842] doi:10.1038/s42003-025-08070-3 [paper, data]
Transcriptomic sex differences in early human fetal brain development.
Journal: Communications biology
Status: data only, 2 datasets cited
[843] doi:10.1016/j.neubiorev.2025.106176 [paper, repository]
The effects of childhood adversity: Two specific neural patterns.
Journal: Neuroscience and biobehavioral reviews
Authors' code: OSF dt3kj (no license)
Status: code verified, 10 files readable
[844] doi:10.1016/j.jbc.2025.108542 [paper]
Alternative splicing categorizes organ development by stage and reveals unique human splicing variants linked to neuromuscular disorders.
Journal: The Journal of biological chemistry
Status: data only

Wednesday, 23 April 2025 (2 papers)

[845] doi:10.1038/s41467-025-58821-3 [paper, data]
Nkx2.7 is a conserved regulator of craniofacial development.
Journal: Nature communications
Status: data only, 1 dataset cited
[846] doi:10.1016/j.neuroimage.2025.121238 [paper, repository]
Characterizing the effects of age, puberty, and sex on variability in resting-state functional connectivity in late childhood and early adolescence.
Journal: NeuroImage
Authors' code: DCAN-Labs/abcd-hcp-pipeline (BSD-3-Clause)
Status: code verified, 8 files readable, 2 matches

Tuesday, 22 April 2025 (1 paper)

[847] doi:10.1016/j.neurot.2025.e00598 [paper, data]
Maternal oxytocin administration mitigates nociceptive, social, and epigenetic impairments in adolescent offspring exposed to perinatal trauma.
Journal: Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics
Status: data only, 1 dataset cited

Friday, 18 April 2025 (2 papers)

[848] doi:10.1530/rep-24-0378 [paper, data]
Impact of intraamniotic inflammation on tryptophan metabolism in the placenta-fetal brain axis in rats.
Journal: Reproduction (Cambridge, England)
Status: data only, 2 datasets cited
[849] doi:10.1073/pnas.2415425122 [paper, repository]
Mapping the developmental profile of ventricular zone-derived neurons in the human cerebellum.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: anderswe/vz_derivatives (MIT)
Status: code verified, 13 files readable, 12 matches

Thursday, 17 April 2025 (1 paper)

[850] doi:10.1016/j.jcmgh.2025.101518 [paper, data]
Decreasing Proprotein Convertase 5 Causes Hirschsprung's Disease by Disrupting Neural Crest Cell Migration.
Journal: Cellular and molecular gastroenterology and hepatology
Status: data only, 1 dataset cited

Wednesday, 16 April 2025 (3 papers)

[851] doi:10.1242/jeb.250024 [paper, data]
Transcriptomic correlates of nutritional manipulation in a facultatively social bee.
Journal: The Journal of experimental biology
Status: data only, 2 datasets cited
[852] doi:10.1038/s41598-025-96538-x [paper]
Evaluating the effects of volume censoring on fetal functional connectivity.
Journal: Scientific reports
Status: code on request
[853] doi:10.3389/frdem.2025.1546433 [paper, repository]
Neurogenesis drives hippocampal formation-wide spatial transcription alterations in health and Alzheimer's disease.
Journal: Frontiers in dementia
Authors' code: Zenodo 12810114 (CC-BY-4.0)
Status: code verified

Tuesday, 15 April 2025 (1 paper)

[854] doi:10.1038/s41562-025-02160-2 [paper, repository]
Charting brain functional development from birth to 6 years of age.
Journal: Nature human behaviour
Authors' code: jfortin1/combatharmonization (no license), OSF h25a7 (no license)
Status: code verified, 17 files readable

Monday, 14 April 2025 (2 papers)

[855] doi:10.1101/gr.279318.124 [paper, data]
Optical genome mapping identifies rare structural variants in neural tube defects.
Journal: Genome research
Status: data only, 1 dataset cited
[856] doi:10.1186/s13073-025-01451-7 [paper, repository]
Epigenetic timing effects on child developmental outcomes: a longitudinal meta-regression of findings from the Pregnancy And Childhood Epigenetics Consortium.
Journal: Genome medicine
Status: code verified, 21 files readable

Sunday, 13 April 2025 (1 paper)

[857] doi:10.1016/j.nicl.2025.103786 [paper, repository]
Differential patterns of axonal loss associated with threat-related adversity in atypical depression and non-atypical depression.
Journal: NeuroImage. Clinical
Authors' code: pnlbwh/pnlNipype (other)
Status: code verified, 28 files readable, 3 matches

Friday, 11 April 2025 (1 paper)

[858] doi:10.1073/pnas.2424521122 [paper, repository]
Global subnational estimates of migration of scientists reveal large disparities in internal and international flows.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: code verified, 38 files readable, 8 matches

Thursday, 10 April 2025 (2 papers)

[859] doi:10.1242/dev.204347 [paper, data]
Insulin-like growth factor 2 as a driving force for exponential expansion and differentiation of the neonatal thymus.
Journal: Development (Cambridge, England)
Status: data only, 1 dataset cited
[860] doi:10.1016/j.neuroimage.2025.121190 [paper, repository]
FetDTIAlign: A deep learning framework for affine and deformable registration of fetal brain dMRI.
Journal: NeuroImage
Authors' code: blibli/fetdtialign (GPL-3.0)
Status: code verified, 17 files readable

Wednesday, 9 April 2025 (3 papers)

[861] doi:10.1186/s12889-025-22407-x [paper, repository]
Consumption of folic acid fortified foods among Hispanic women of reproductive age in the US: a systematic review.
Journal: BMC public health
Authors' code: OSF 7tx3a (no license)
Status: empty repository
[862] doi:10.3389/fnins.2025.1542957 [paper, repository]
Age-related white matter alterations in children with neurofibromatosis type 1: a diffusion MRI tractography study.
Journal: Frontiers in neuroscience
Authors' code: vistalab/vistasoft (no license)
Status: code verified, 2,000 files readable, 1 match
[863] doi:10.1162/imag_a_00537 [paper, repository]
Streamline tractography of the fetal brain in utero with machine learning.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: liuweide01/MLFT (no license)
Status: code verified, 6 files readable, 1 match

Tuesday, 8 April 2025 (2 papers)

[864] doi:10.1073/pnas.2416423122 [paper, repository]
Cortical scaling of the neonatal brain in typical and altered development.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: supp:PMC12012530/pnas.2416423122.sd02.r (no license)
Status: code verified, 1 file readable
[865] doi:10.1097/ee9.0000000000000379 [paper, repository]
Associations of prenatal exposure to residential greenspace and active living environments with cerebral palsy: A population-based cohort study in Ontario, Canada.
Journal: Environmental epidemiology (Philadelphia, Pa.)
Authors' code: ices.on.ca (no license)
Status: code verified

Monday, 7 April 2025 (2 papers)

[866] doi:10.1073/pnas.2409985122 [paper, repository]
Whole-brain white matter variation across childhood environments.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: OSF cfzrq (no license)
Status: code verified, 5 files readable, 13 matches
[867] doi:10.1038/s41467-025-58604-w [paper, repository]
MRI signatures of cortical microstructure in human development align with oligodendrocyte cell-type expression.
Journal: Nature communications
Authors' code: palombom/SANDI-Matlab-Toolbox-v1.0 (BSD-2-Clause)
Status: code verified, 69 files readable, 5 matches

Thursday, 3 April 2025 (2 papers)

[868] doi:10.1073/pnas.2402305122 [paper, data]
Dual genetic tracing demonstrates the heterogeneous differentiation and function of neuromesodermal progenitors in vivo.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited
[869] doi:10.1101/2025.04.03.646882 [paper, repository]
Cortical motor activity modulates respiration and reduces apnoea in neonates
Journal: bioRxiv (preprint)
Status: code verified, 32 files readable, 16 matches

Wednesday, 2 April 2025 (2 papers)

[870] doi:10.1162/nol_a_00161 [paper, repository]
The Effects of Prenatal Alcohol Exposure on Structural Brain Connectivity and Early Language Skills in a South African Birth Cohort.
Journal: Neurobiology of language (Cambridge, Mass.)
Authors' code: ghasoub-m/CT_Connectome_manuscript (no license)
Status: code verified, 1 file readable
[871] doi:10.3390/biomedicines13040860 [paper, data]
Neurotropic Effects of Cortexin on Models of Mental and Physical Developmental Delay.
Journal: Biomedicines
Status: data only, 1 dataset cited

Tuesday, 1 April 2025 (5 papers)

[872] doi:10.1093/brain/awae320 [paper, data]
Monoallelic de novo variants in DDX17 cause a neurodevelopmental disorder.
Journal: Brain : a journal of neurology
Status: data only, 1 dataset cited
[873] doi:10.1371/journal.pone.0319406 [paper, data]
Pupillary responses to bright and dark stimuli in individuals with autism spectrum disorders.
Journal: PloS one
Status: data only, 1 dataset cited
[874] doi:10.1371/journal.pbio.3002710 [paper, repository]
The multiscale brain structural re-organization that occurs from childhood to adolescence correlates with cortical morphology maturation and functional specialization.
Journal: PLoS biology
Status: code verified, 476 files readable, 16 matches
[875] doi:10.1111/adb.70038 [paper, data]
The Impact of Bullying Victimization on Short Video Addiction in Adolescents: The Role of Emotional Distress and Neural Mechanisms.
Journal: Addiction biology
Status: data only, 1 dataset cited
[876] doi:10.1016/j.bpsgos.2025.100495 [paper, repository]
Rare Copy Number Variants Reveal Critical Cell Types and Periods of Brain Development in Neurodevelopmental Disorders.
Journal: Biological psychiatry global open science
Authors' code: satijalab/seurat (other)
Status: code verified, 136 files readable

Saturday, 29 March 2025 (1 paper)

[877] doi:10.1016/j.ebiom.2025.105679 [paper, repository]
Foetal cortical expansion is associated with neurodevelopmental outcome at 2-years in congenital heart disease: a longitudinal follow-up study.
Journal: EBioMedicine
Status: code verified, 87 files readable

Thursday, 27 March 2025 (1 paper)

[878] doi:10.1016/j.isci.2025.112313 [paper, data]
Auditory evoked delta brushes involve stimulus-specific cortical networks in preterm infants.
Journal: iScience
Status: code on request, 1 dataset cited

Wednesday, 26 March 2025 (2 papers)

[879] doi:10.1038/s41398-025-03327-1 [paper, data]
Brain asymmetry and its association with inattention and heritability during neurodevelopment.
Journal: Translational psychiatry
Status: data only, 2 datasets cited
[880] doi:10.1038/s42003-025-07939-7 [paper, repository]
The lifelong nonlinear development of spatial variability of brain signals.
Journal: Communications biology
Authors' code: Zenodo 15003714 (CC-BY-4.0), Zenodo 15003715 (CC-BY-4.0)
Status: code verified, 10 files readable, 3 matches

Tuesday, 25 March 2025 (1 paper)

[881] doi:10.1186/s12864-025-11496-y [paper, data]
Genome-wide chromatin accessibility and selective signals of meat rabbits reveal key Cis-regulatory elements and variants during postnatal development of skeletal muscles in rabbits.
Journal: BMC genomics
Status: data only, 1 dataset cited

Monday, 24 March 2025 (4 papers)

[882] doi:10.1136/jnnp-2023-332969 [paper, repository]
Genetics impact risk of Alzheimer's disease through mechanisms modulating structural brain morphology in late life.
Journal: Journal of neurology, neurosurgery, and psychiatry
Authors' code: rskl92/AD_BRAIN_BIDIRECTIONAL_MR (no license)
Status: code verified, 5 files readable, 3 matches
[883] doi:10.1111/camh.12763 [paper, repository]
Longitudinal effects of green, blue, and gray spaces on early adolescent mental health in the United States.
Journal: Child and adolescent mental health
Authors' code: OSF vfbxh (no license)
Status: empty repository
[884] doi:10.1016/j.isci.2025.112284 [paper, data]
Postnatal hyperosmolality alters development of hypothalamic feeding circuits with context-specific changes in ingestive behavior.
Journal: iScience
Status: code on request, 1 dataset cited
[885] doi:10.1162/imag_a_00512 [paper, repository]
The developing Human Connectome Project fetal functional MRI release: Methods and data structures.
Journal: Imaging neuroscience (Cambridge, Mass.)
Status: code verified, 31 files readable, 2 matches

Thursday, 20 March 2025 (3 papers)

[886] doi:10.1016/j.dcn.2025.101554 [paper, repository]
Amygdala subregion volumes and apportionment in preadolescents - Associations with age, sex, and body mass index.
Journal: Developmental cognitive neuroscience
Authors' code: figshare 28628258 (CC-BY-4.0)
Status: empty repository
[887] doi:10.1162/imag_a_00509 [paper, repository]
Analytical pipeline optimisation in developmental fNIRS hyperscanning data: Neural coherence between 4- to 6-year old children collaborating with their mothers.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: vmousley/pc_fNIRS_hyperscanning (no license)
Status: code verified, 16 files readable, 6 matches
[888] doi:10.1162/imag_a_00504 [paper, repository]
Individual patterns of functional connectivity in neonates as revealed by surface-based Bayesian modeling.
Journal: Imaging neuroscience (Cambridge, Mass.)
Status: code verified, 54 files readable, 12 matches

Tuesday, 18 March 2025 (2 papers)

[889] doi:10.1136/bmjopen-2025-100276 [paper, repository]
Health and education outcomes from adolescence to adulthood for young people with neurodisability and their peers: protocol for a population-based cohort study using linked hospital and education data from England.
Journal: BMJ open
Authors' code: UCL-ECHILD (no license)
Status: code verified
[890] doi:10.1016/j.dcn.2025.101553 [paper, repository]
Intersubject neural similarity reveals the development trajectory of recognition memory in children.
Journal: Developmental cognitive neuroscience
Authors' code: OSF ghbpj (no license)
Status: code verified, 5 files readable

Monday, 17 March 2025 (1 paper)

[891] doi:10.1109/tmi.2024.3485554 [paper, repository]
Multi-Center Fetal Brain Tissue Annotation (FeTA) Challenge 2022 Results.
Journal: IEEE transactions on medical imaging
Authors' code: hub.docker.com/u/fetachallenge22 (no license), deepmind/surface-distance (Apache-2.0), Zenodo 10628648 (CC-BY-NC-4.0), Zenodo 10628647 (CC-BY-NC-4.0), Zenodo 6683366 (CC-BY-ND-4.0), Zenodo 3878564 (GPL-3.0)
Status: code verified, 8 files readable

Sunday, 16 March 2025 (1 paper)

[892] doi:10.3390/diagnostics15060743 [paper, data]
Application of Liquid Chromatography/Tandem Mass Spectrometry for Quantitative Analysis of Plasmalogens in Preadolescent Children-The Hokkaido Study.
Journal: Diagnostics (Basel, Switzerland)
Status: data only, 1 dataset cited

Thursday, 13 March 2025 (3 papers)

[893] doi:10.1073/pnas.2414636122 [paper, repository]
Infant EEG microstate dynamics relate to fine-grained patterns of infant attention during naturalistic play with caregivers.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: code verified, 1 file readable, 2 matches
[894] doi:10.3389/fnins.2025.1533253 [paper, data]
DYRK1A roles in human neural progenitors.
Journal: Frontiers in neuroscience
Status: data only, 1 dataset cited
[895] doi:10.1162/imag_a_00489 [paper, repository]
Pushing the boundaries of MEG based on optically pumped magnetometers towards early human life.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: Zenodo 10213856 (CC-BY-4.0), Zenodo 10213974 (CC-BY-4.0), Zenodo 10213973 (CC-BY-4.0)
Status: code verified

Wednesday, 12 March 2025 (3 papers)

[896] doi:10.1126/sciadv.ado1164 [paper, data]
Shaping early neural development by timed elevated tissue oxygen tension: Insights from multiomic analysis on human cerebral organoids.
Journal: Science advances
Status: data only, 1 dataset cited
[897] doi:10.1016/j.dcn.2025.101551 [paper, repository]
A subset of cortical areas exhibit adult-like functional network patterns in early childhood.
Journal: Developmental cognitive neuroscience
Status: code verified, 210 files readable, 15 matches
[898] doi:10.1016/j.nicl.2025.103767 [paper, repository]
Neurometabolic network (NMetNet) for functional neurological disorder in children and adolescents.
Journal: NeuroImage. Clinical
Authors' code: lanzhouBWH/NMetNet_FND (no license)
Status: code verified, 3 files readable

Tuesday, 11 March 2025 (2 papers)

[899] doi:10.1371/journal.pbio.3002989 [paper, repository]
Genetic, developmental, and neural changes underlying the evolution of butterfly mate preference.
Journal: PLoS biology
Authors' code: isovic/racon (MIT)
Status: code verified, 14 files readable
[900] doi:10.1016/j.xpro.2025.103678 [paper, data]
Protocol for generating human cerebral organoids from two-dimensional cultures of pluripotent stem cells bypassing embryoid body aggregation.
Journal: STAR protocols
Status: data only, 1 dataset cited

Friday, 7 March 2025 (1 paper)

[901] doi:10.1016/j.neuroimage.2025.121104 [paper]
Towards automatic US-MR fetal brain image registration with learning-based methods.
Journal: NeuroImage
Status: code on request

Thursday, 6 March 2025 (2 papers)

[902] doi:10.1038/s41467-025-57052-w [paper, repository]
A prenatal window for enhancing spatial resolution of cortical barrel maps.
Journal: Nature communications
Authors' code: ackman678/CalciumDX (GPL-2.0), ackman678/wholeBrainDX (GPL-2.0)
Status: code verified, 273 files readable, 2 matches
[903] doi:10.1016/j.dcn.2025.101543 [paper, repository]
Assessing neurocognitive maturation in early adolescence based on baby and adult functional brain landscapes.
Journal: Developmental cognitive neuroscience
Authors' code: okardan/Anchored_rsFC_maturation (no license), nda.nih.gov/study.html (no license)
Status: code verified, 10 files readable, 3 matches

Wednesday, 5 March 2025 (3 papers)

[904] doi:10.1038/s44271-025-00193-x [paper, repository]
Person-centered analyses reveal that developmental adversity at moderate levels and neural threat/safety discrimination are associated with lower anxiety in early adulthood.
Journal: Communications psychology
Authors' code: Yale-CANDLab/Shapes_DevAdversity_LPA (no license)
Status: code verified, 5 files readable, 8 matches
[905] doi:10.1186/s12974-025-03381-y [paper, repository]
Bystander neuronal progenitors in forebrain organoids promote protective antiviral responses.
Journal: Journal of neuroinflammation
Authors' code: Zenodo 14907845 (no license)
Status: dead link
[906] doi:10.1101/2025.03.04.641459 [paper, repository]
Motifs of brain cortical folding from birth to adulthood: structural asymmetry and folding-functional links
Journal: bioRxiv (preprint)
Status: code verified, 962 files readable

Tuesday, 4 March 2025 (1 paper)

[907] doi:10.1111/jcpp.14143 [paper, repository]
Different sensory dimensions in infancy are associated with separable etiological influences and with autistic traits in toddlerhood.
Journal: Journal of child psychology and psychiatry, and allied disciplines
Authors' code: brainhabit/BT-ITSP (no license)
Status: code verified, 6 files readable, 5 matches

Monday, 3 March 2025 (1 paper)

[908] doi:10.1016/j.dcn.2025.101532 [paper, repository]
Developmental timing of adversity and neural network organization: An fNIRS study of the impact of refugee displacement.
Journal: Developmental cognitive neuroscience
Authors' code: OSF 9wkmf (no license)
Status: code found, still to be checked

Saturday, 1 March 2025 (3 papers)

[909] doi:10.1002/hbm.70163 [paper, repository]
The Relations Among Anxiety, Movie-Watching, and in-Scanner Motion.
Journal: Human brain mapping
Authors' code: OSF 6v42r (no license)
Status: code verified, 5 files readable, 1 match
[910] doi:10.1093/scan/nsaf018 [paper]
Connectome-wide brain signature during fast-food advertisement exposure predicts BMI at 2 years.
Journal: Social cognitive and affective neuroscience
Status: code on request
[911] doi:10.1111/ejn.70033 [paper, repository]
Forestwalk: A Machine Learning Workflow Brings New Insights Into Posture and Balance in Rodent Beam Walking.
Journal: The European journal of neuroscience
Authors' code: Roche/neuro-forestwalk (Apache-2.0)
Status: code verified, 13 files readable, 5 matches

Thursday, 27 February 2025 (1 paper)

[912] doi:10.1016/j.stemcr.2025.102421 [paper]
Autism- and intellectual disability-associated MYT1L mutation alters human cortical interneuron differentiation, maturation, and physiology.
Journal: Stem cell reports
Status: data only

Wednesday, 26 February 2025 (2 papers)

[913] doi:10.1016/j.isci.2025.112104 [paper, repository]
From initial formation to developmental refinement: GABAergic inputs shape neuronal subnetworks in the primary somatosensory cortex.
Journal: iScience
Status: code verified, 250 files readable, 7 matches
[914] doi:10.1162/imag_a_00490 [paper, repository]
HAITCH: A framework for distortion and motion correction in fetal multi-shell diffusion-weighted MRI.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: FEDIToolbox (no license), IntelligentImaging/HAITCH (GPL-3.0)
Status: code verified, 35 files readable, 12 matches

Friday, 21 February 2025 (2 papers)

[915] doi:10.1038/s41467-025-57080-6 [paper]
Cerebellar output neurons can impair non-motor behaviors by altering development of extracerebellar connectivity.
Journal: Nature communications
Status: code on request
[916] doi:10.1038/s41598-025-90860-0 [paper, repository]
Disruption of functional network development in children with prenatal Zika virus exposure revealed by resting-state EEG.
Journal: Scientific reports
Authors' code: Zenodo 13311078 (no license)
Status: dead link

Thursday, 20 February 2025 (4 papers)

[917] doi:10.1073/pnas.2411098122 [paper, repository]
Temporal autocorrelation is predictive of age-An extensive MEG time-series analysis.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: time-series-features.gitbook.io/hctsa-manual (no license), chstier/Aging_timefeats (GPL-2.0), benfulcher/hctsa (CC-BY-NC-SA-4.0), mlconfound.readthedocs.io (no license)
Status: code verified, 1,193 files readable, 16 matches
[918] doi:10.1073/pnas.2411492122 [paper, repository]
Learning-based inference of longitudinal image changes: Applications in embryo development, wound healing, and aging brain.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: heejong-kim/LILAC (Apache-2.0)
Status: code verified, 9 files readable
[919] doi:10.1159/000544824 [paper, repository]
Quantifying the Timing of Gyral and Sulcal Formation Relative to Growth in the Ferret Cerebral Cortex.
Journal: Developmental neuroscience
Authors' code: stnava/ANTsDoc (no license)
Status: code verified, 25 files readable
[920] doi:10.1186/s13148-025-01837-9 [paper]
Glucocorticoid exposure-induced alterations in epigenetic age from human preterm infants and human lung fibroblasts and hippocampal neuronal cells.
Journal: Clinical epigenetics
Status: data only

Tuesday, 18 February 2025 (2 papers)

[921] doi:10.1038/s41467-025-57066-4 [paper, data]
Genome-wide interaction association analysis identifies interactive effects of childhood maltreatment and kynurenine pathway on depression.
Journal: Nature communications
Status: data only, 1 dataset cited
[922] doi:10.1162/imag_a_00470 [paper, repository]
Fast and reliable quantitative measures of white matter development with magnetic resonance fingerprinting.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: SophieSchau/MRF_demo_ISMRM2022 (no license)
Status: code verified, 19 files readable, 1 match

Monday, 17 February 2025 (3 papers)

[923] doi:10.1038/s41467-025-56855-1 [paper, repository]
Copy number variants and the tangential expansion of the cerebral cortex.
Journal: Nature communications
Authors' code: miykael/parcellation_fragmenter (BSD-3-Clause), Zhijie31/CNV-SA (no license)
Status: code verified, 25 files readable, 9 matches
[924] doi:10.1016/j.nicl.2025.103758 [paper, repository]
White matter microstructural integrity mediates associations between prenatal endocrine-disrupting chemicals exposure and intelligence in adolescents.
Journal: NeuroImage. Clinical
Authors' code: MIC-DKFZ/TractSeg (Apache-2.0), canlab/CanlabCore (GPL-2.0)
Status: code verified, 2,108 files readable, 2 matches
[925] doi:10.1093/braincomms/fcaf074 [paper, repository]
Exploring functional connectivity in clinical and data-driven groups of preterm and term adults.
Journal: Brain communications
Status: code verified, 34 files readable, 3 matches

Saturday, 15 February 2025 (1 paper)

[926] doi:10.1186/s11689-025-09596-7 [paper, repository]
The striatal matrix compartment is expanded in autism spectrum disorder.
Journal: Journal of neurodevelopmental disorders
Status: code verified, 17 files readable, 2 matches

Friday, 14 February 2025 (1 paper)

[927] doi:10.3389/fnetp.2025.1488349 [paper, repository]
PINNing cerebral blood flow: analysis of perfusion MRI in infants using physics-informed neural networks.
Journal: Frontiers in network physiology
Authors' code: cgalaz01/supinn (MIT)
Status: code verified, 9 files readable, 4 matches

Wednesday, 12 February 2025 (2 papers)

[928] doi:10.1186/s11689-025-09594-9 [paper, repository]
An exploratory fetal MRI study examining the impact of 22q11.2 microdeletion syndrome on early brain growth.
Journal: Journal of neurodevelopmental disorders
Authors' code: hub.docker.com/r/fetalsvrtk (no license)
Status: code verified
[929] doi:10.3389/fnins.2025.1538115 [paper, data]
Gestational diabetes induces autistic-like behaviors in offspring by disrupting the GABAergic system.
Journal: Frontiers in neuroscience
Status: data only, 1 dataset cited

Tuesday, 11 February 2025 (2 papers)

[930] doi:10.1371/journal.pone.0306500 [paper, data]
Childhood brain morphometry in children with persistent stunting and catch-up growth.
Journal: PloS one
Status: data only, 1 dataset cited
[931] doi:10.1038/s41366-025-01730-8 [paper]
Associations between maternal pre-pregnancy BMI and mean diffusivity of the hippocampus and amygdala in infants.
Journal: International journal of obesity (2005)
Status: code on request

Monday, 10 February 2025 (2 papers)

[932] doi:10.1073/pnas.2421772122 [paper, data]
Double assurance in the induction of axial development by egg dorsal determinants in <i>Xenopus</i> embryos.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited
[933] doi:10.1093/pnasnexus/pgaf015 [paper, repository]
Typical and disrupted small-world architecture and regional communication in full-term and preterm infants.
Journal: PNAS nexus
Authors' code: huiqinghu/Graph-theory_Infant-project (no license)
Status: code verified, 3 files readable

Saturday, 8 February 2025 (1 paper)

[934] doi:10.1016/j.dcn.2025.101518 [paper, repository]
Longitudinal analysis of the ABCD® study.
Journal: Developmental cognitive neuroscience
Authors' code: longitudinal.dev (no license), cmig-research-group/cmig_tools (other), OpenDevSci/LongDev-ABCD (no license)
Status: code verified, 261 files readable, 1 match

Friday, 7 February 2025 (1 paper)

[935] doi:10.1016/j.dcn.2025.101526 [paper, repository]
A longitudinal neuroimaging study of adolescent girls' mentalizing and perspective-taking tendencies.
Journal: Developmental cognitive neuroscience
Authors' code: Zenodo 1412131 (other-open)
Status: code verified, 5 files readable, 1 match

Wednesday, 5 February 2025 (1 paper)

[936] doi:10.1038/s41398-025-03253-2 [paper, repository]
Autism spectrum disorder common variants associated with regional lobe volume variations at birth: cross-sectional study in 273 European term neonates in developing human connectome project.
Journal: Translational psychiatry
Authors' code: lehai-ml/dhcp_genetics (no license), lehai-ml/nimagen (MIT)
Status: code verified, 62 files readable, 7 matches

Tuesday, 4 February 2025 (4 papers)

[937] doi:10.1007/s00213-025-06749-3 [paper, data]
Exploring the effects of adolescent social isolation stress on the serotonin system and ethanol-motivated behaviors.
Journal: Psychopharmacology
Status: data only, 1 dataset cited
[938] doi:10.1038/s41467-025-56533-2 [paper, repository]
Atlas of multilineage stem cell differentiation reveals TMEM88 as a developmental regulator of blood pressure.
Journal: Nature communications
Status: code verified, 78 files readable, 6 matches
[939] doi:10.1038/s41398-025-03252-3 [paper, repository]
Autism common variants associated with white matter alterations at birth: cross-sectional fixel-based analyses of 221 European term-born neonates from the developing human connectome project.
Journal: Translational psychiatry
Authors' code: lehai-ml/dHCP_genetics (no license), lehai-ml/nimagen (MIT)
Status: code verified, 62 files readable, 20 matches
[940] doi:10.1186/s12887-024-05367-w [paper, repository]
Associations between media parenting practices and early adolescent consumption of R-rated movies and mature-rated video games.
Journal: BMC pediatrics
Authors' code: jasonmnagata/abcd-study (no license)
Status: code verified, 6 files readable, 1 match

Monday, 3 February 2025 (1 paper)

[941] doi:10.1038/s41598-024-79023-9 [paper, data]
Dissociative experiences alter resting state functional connectivity after childhood abuse.
Journal: Scientific reports
Status: data only, 1 dataset cited

Saturday, 1 February 2025 (4 papers)

[942] doi:10.1002/hbm.70073 [paper, repository]
Whole Brain MRI Assessment of Age and Sex-Related R2* Changes in the Human Fetal Brain.
Journal: Human brain mapping
Authors' code: Zenodo 14051966 (CC-BY-4.0), Zenodo 13905953 (CC-BY-4.0), Zenodo 17109779 (CC-BY-4.0)
Status: code verified
[943] doi:10.1002/hbm.26806 [paper, repository]
Measuring the effects of motion corruption in fetal fMRI.
Journal: Human brain mapping
Authors' code: cirmuw/fetalfMRIproc (MIT)
Status: code verified, 25 files readable, 9 matches
[944] doi:10.1093/cercor/bhaf007 [paper]
Developmental maturation of millimeter-scale functional networks across brain areas.
Journal: Cerebral cortex (New York, N.Y. : 1991)
Status: code on request
[945] doi:10.1093/stcltm/szae090 [paper, data]
Assessment of immune modulation strategies to enhance survival and integration of human neural progenitor cells in rodent models of spinal cord injury.
Journal: Stem cells translational medicine
Status: data only, 1 dataset cited

Friday, 31 January 2025 (1 paper)

[946] doi:10.1371/journal.pone.0318422 [paper]
Folic acid supplementation during preconception period in sub-Saharan African countries: A systematic review and meta-analysis.
Journal: PloS one
Status: code on request

Wednesday, 29 January 2025 (2 papers)

[947] doi:10.1162/imag_a_00450 [paper]
Characterizing the temporal dynamics and maturation of brain activity during sleep: An EEG microstate study in preterm and full-term infants.
Journal: Imaging neuroscience (Cambridge, Mass.)
Status: code on request
[948] doi:10.1002/jcv2.12298 [paper, repository]
Validation of CBCL depression scores of adolescents in three independent datasets.
Journal: JCPP advances
Status: code verified, 13 files readable, 2 matches

Tuesday, 28 January 2025 (1 paper)

[949] doi:10.1007/s10278-025-01399-5 [paper, repository]
MHNet: Multi-view High-Order Network for Diagnosing Neurodevelopmental Disorders Using Resting-State fMRI.
Journal: Journal of imaging informatics in medicine
Status: code verified, 129 files readable, 1 match

Monday, 27 January 2025 (1 paper)

[950] doi:10.3758/s13415-024-01262-0 [paper, repository]
Individual differences in intolerance of uncertainty is primarily linked to the structure of inferior frontal regions.
Journal: Cognitive, affective & behavioral neuroscience
Authors' code: OSF bmp9r (no license)
Status: code verified, 2 files readable, 10 matches

Friday, 24 January 2025 (1 paper)

[951] doi:10.1007/s00247-025-06165-x [paper, repository]
Scanner-based real-time three-dimensional brain + body slice-to-volume reconstruction for T2-weighted 0.55-T low-field fetal magnetic resonance imaging.
Journal: Pediatric radiology
Authors' code: SVRTK/auto-proc-svrtk (GPL-3.0), gadgetron/gadgetron (MIT), hub.docker.com/r/fetalsvrtk (no license)
Status: code verified, 1,129 files readable, 4 matches

Thursday, 23 January 2025 (4 papers)

[952] doi:10.1038/s44319-025-00367-y [paper, data]
Natural variations of adolescent neurogenesis and anxiety predict the hierarchical status of adult inbred mice.
Journal: EMBO reports
Status: data only, 1 dataset cited
[953] doi:10.1186/s13287-024-04121-4 [paper, data]
Magnesium ions regulate the Warburg effect to promote the differentiation of enteric neural crest cells into neurons.
Journal: Stem cell research & therapy
Status: data only, 2 datasets cited
[954] doi:10.1002/path.6390 [paper, repository]
SMARCB1-deficient malignant melanocytic uveal tumours: a new neural crest-derived tumour entity with SMARCB1-related germline predisposition.
Journal: The Journal of pathology
Authors' code: Zenodo 7443721 (CC-BY-4.0), InstituteCurieClinicalBioinformatics/NanoCliD (CECILL-2.1), bioinfo-pf-curie/rna-seq (CECILL-2.1)
Status: code verified, 46 files readable, 2 matches
[955] doi:10.1093/noajnl/vdaf016 [paper, repository]
Inferred developmental origins of brain tumors from single-cell RNA-sequencing data.
Journal: Neuro-oncology advances
Authors' code: Su-Wang-UTH/COORS (no license)
Status: code verified, 4 files readable, 9 matches

Wednesday, 22 January 2025 (1 paper)

[956] doi:10.1126/sciadv.adn6377 [paper, repository]
Significance of birth in the maintenance of quiescent neural stem cells.
Journal: Science advances
Authors' code: kharchenkolab/cacoa (no license), Zenodo 12635369 (CC-BY-4.0), khodosevichlab/preterm_birth_2023_code_repo (no license)
Status: code verified, 26 files readable, 4 matches

Tuesday, 21 January 2025 (1 paper)

[957] doi:10.1007/s11307-025-01983-9 [paper]
Autoradiography of Intracerebral Tumours in the Chick Embryo Model: A Feasibility Study Using Different PET Tracers.
Journal: Molecular imaging and biology
Status: code on request

Monday, 20 January 2025 (2 papers)

[958] doi:10.1242/dev.204357 [paper, data]
Sox10 is required for systemic initiation of bone mineralization.
Journal: Development (Cambridge, England)
Status: data only, 1 dataset cited
[959] doi:10.1016/j.isci.2025.111857 [paper]
Long-term consequences of adolescent exposure to the synthetic cannabinoid AB-FUBINACA in male and female mice.
Journal: iScience
Status: code on request

Saturday, 18 January 2025 (1 paper)

[960] doi:10.1038/s41467-025-55863-5 [paper, repository]
Quantification and prediction of human fetal (-)-Δ<sup>9</sup>-tetrahydrocannabinol/(±)-11-OH-Δ<sup>9</sup>-tetrahydrocannabinol exposure during pregnancy to inform fetal cannabis toxicity.
Journal: Nature communications
Authors' code: Zenodo 14027760 (CC-BY-4.0)
Status: code verified, 9 files readable, 2 matches

Friday, 17 January 2025 (1 paper)

[961] doi:10.1371/journal.pone.0315538 [paper, data]
Convolutional neural network (CNN) configuration using a learning automaton model for neonatal brain image segmentation.
Journal: PloS one
Status: data only, 1 dataset cited

Thursday, 16 January 2025 (2 papers)

[962] doi:10.1016/j.nicl.2025.103736 [paper, repository]
Probing Autism and ADHD subtypes using cortical signatures of the T1w/T2w-ratio and morphometry.
Journal: NeuroImage. Clinical
Authors' code: OSF dfvk9 (no license)
Status: code verified, 2 files readable, 9 matches
[963] doi:10.3390/nu17020303 [paper]
Associations of Maternal Prenatal Zinc Consumption with Infant Brain Tissue Organization and Neurodevelopmental Outcomes.
Journal: Nutrients
Status: code on request

Wednesday, 15 January 2025 (3 papers)

[964] doi:10.1038/s41467-025-56059-7 [paper, data]
Morphological and functional convergence of visual projection neurons from diverse neurogenic origins in Drosophila.
Journal: Nature communications
Status: data only, 1 dataset cited
[965] doi:10.1126/sciadv.adp9587 [paper, repository]
Impact of developmental temperature on neural growth, connectivity, and function.
Journal: Science advances
Authors' code: gitlab.rlp.net/mrtlllab/zuefle_batista_etal_2024 (no license), Zenodo 14203758 (CC-BY-4.0)
Status: code verified, 46 files readable, 4 matches
[966] doi:10.3389/fphar.2024.1508696 [paper, data]
Pharmacokinetics of 7,8-dihydroxyflavone in neonatal mice with hypoxia-ischemia related brain injury.
Journal: Frontiers in pharmacology
Status: data only, 1 dataset cited

Tuesday, 14 January 2025 (1 paper)

[967] doi:10.1038/s43856-024-00701-w [paper, repository]
Deep learning empowered sensor fusion boosts infant movement classification.
Journal: Communications medicine
Authors' code: Zenodo 14046527 (CC-BY-4.0)
Status: code verified, 17 files readable, 4 matches

Saturday, 11 January 2025 (1 paper)

[968] doi:10.1016/j.xpro.2024.103566 [paper]
Protocol for microinjection of rapamycin into the zebrafish habenula.
Journal: STAR protocols
Status: code on request

Friday, 10 January 2025 (4 papers)

[969] doi:10.1038/s42003-024-07444-3 [paper, data]
Prenatal maternal stress in rats alters the epigenetic and transcriptomic landscape of the maternal-fetal interface across four generations.
Journal: Communications biology
Status: data only, 1 dataset cited
[970] doi:10.1016/j.jbc.2025.108173 [paper, data]
Maternal obesity alters histone modifications mediated by the interaction between EZH2 and AMPK, impairing neural differentiation in the developing embryonic brain cortex.
Journal: The Journal of biological chemistry
Status: data only, 1 dataset cited
[971] doi:10.1038/s44220-024-00354-7 [paper, repository]
Relationships of eating behaviors with psychopathology, brain maturation and genetic risk for obesity in an adolescent cohort study.
Journal: Nature. Mental health
Status: code verified, 138 files readable, 13 matches
[972] doi:10.1016/j.abrep.2025.100585 [paper, data]
Influence of binge drinking on the resting state functional connectivity of university Students: A follow-up study.
Journal: Addictive behaviors reports
Status: data only, 1 dataset cited

Thursday, 9 January 2025 (6 papers)

[973] doi:10.1242/dev.204438 [paper, repository]
Spinal cord elongation enables proportional regulation of the zebrafish posterior body.
Journal: Development (Cambridge, England)
Authors' code: DillanSaunders/TailbudAnalysis (BSD-2-Clause)
Status: code verified, 8 files readable, 2 matches
[974] doi:10.7554/elife.96784 [paper, repository]
Fractal cycles of sleep, a new aperiodic activity-based definition of sleep cycles.
Journal: eLife
Authors' code: OSF gxzyd (no license)
Status: code verified, 3 files readable, 5 matches
[975] doi:10.1016/j.dcn.2025.101509 [paper, repository]
Fear extinction retention in children, adolescents, and adults.
Journal: Developmental cognitive neuroscience
Authors' code: runehaubo/ordinal (GPL-2.0)
Status: code verified, 74 files readable, 1 match
[976] doi:10.3390/brainsci15010054 [paper, repository]
The Neurodevelopmental Dynamics of Multilingual Experience During Childhood: A Longitudinal Behavioral, Structural, and Functional MRI Study.
Journal: Brain sciences
Authors' code: sourceforge.net/spmtools (no license)
Status: code verified
[977] doi:10.1016/j.isci.2025.111753 [paper, repository]
Unsupervised spatiotemporal classification of deformation patterns of embryonic tissues matches their fate map.
Journal: iScience
Authors' code: dpastoresc/EmbryoKinematicsFramework (MIT), Zenodo 14698253 (CC-BY-4.0)
Status: code verified, 278 files readable, 4 matches
[978] doi:10.1162/imag_a_00426 [paper, repository]
Multi-echo acquisition and thermal denoising advances precision functional imaging.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: DCAN-Labs/code_infant_me_nordic_paper (no license), Zenodo 10293494 (CC-BY-4.0), Zenodo 7683282 (other-open), Zenodo 6461353 (LGPL-2.1), dcan-labs/abcd-hcp-pipeline (BSD-3-Clause), me-ica/tedana (LGPL-2.1), dcan-labs/infant-abcd-bids-pipeline (BSD-3-Clause)
Status: code verified, 194 files readable, 9 matches

Wednesday, 8 January 2025 (2 papers)

[979] doi:10.1038/s41467-024-55798-3 [paper, repository]
Interconnected pathways link faecal microbiota plasma lipids and brain activity to childhood malnutrition related cognition.
Journal: Nature communications
Authors' code: theoportlock/m4efad (no license), Zenodo 14428001 (MIT)
Status: code verified, 362 files readable, 15 matches
[980] doi:10.1038/s41467-024-55178-x [paper, repository]
Premature birth changes wiring constraints in neonatal structural brain networks.
Journal: Nature communications
Authors' code: alexamousley/neonatal_generative_network_modeling (no license), Zenodo 13913488 (CC-BY-4.0)
Status: code verified, 38 files readable, 12 matches

Tuesday, 7 January 2025 (2 papers)

[981] doi:10.1038/s41467-024-55741-6 [paper, data]
Mitotic block and epigenetic repression underlie neurodevelopmental defects and neurobehavioral deficits in congenital heart disease.
Journal: Nature communications
Status: data only, 3 datasets cited
[982] doi:10.3389/fgene.2024.1451150 [paper, data]
Co-methylation networks associated with cognition and structural brain development during adolescence.
Journal: Frontiers in genetics
Status: data only, 1 dataset cited

Friday, 3 January 2025 (1 paper)

[983] doi:10.1038/s41598-024-84616-5 [paper, repository]
Differential gray matter correlates and machine learning prediction of abuse and internalizing psychopathology in adolescent females.
Journal: Scientific reports
Authors' code: tjkeding/t1-cnn-feature-learning (no license)
Status: code verified, 5 files readable, 3 matches

Thursday, 2 January 2025 (1 paper)

[984] doi:10.1038/s41467-024-54478-6 [paper, repository]
Reduced adult stem cell fate specification led to eye reduction in cave planarians.
Journal: Nature communications
Status: code verified, 19 files readable, 1 match

Wednesday, 1 January 2025 (8 papers)

[985] doi:10.1093/brain/awae198 [paper, repository]
Childhood adiposity underlies numerous adult brain traits commonly attributed to midlife obesity.
Journal: Brain : a journal of neurology
Authors' code: scottchiesa/lifecourse-MR-brain (no license)
Status: code verified, 15 files readable, 1 match
[986] doi:10.1111/desc.13592 [paper, repository]
Combining Real-Time Neuroimaging With Machine Learning to Study Attention to Familiar Faces During Infancy: A Proof of Principle Study.
Journal: Developmental science
Authors' code: OSF yfa6t (no license)
Status: code verified, 18 files readable, 6 matches
[987] doi:10.1002/hbm.70094 [paper, repository]
Balancing Data Quality and Bias: Investigating Functional Connectivity Exclusions in the Adolescent Brain Cognitive Development℠ (ABCD Study) Across Quality Control Pathways.
Journal: Human brain mapping
Authors' code: OSF 57xer (no license)
Status: code verified, 19 files readable, 8 matches
[988] doi:10.1002/hbm.70084 [paper, repository]
Altered Connectome Topology in Newborns at Risk for Cognitive Developmental Delay: A Cross-Etiologic Study.
Journal: Human brain mapping
Authors' code: annspe/connectome_pipeline (no license)
Status: code verified, 33 files readable, 7 matches
[989] doi:10.1002/brb3.70255 [paper, repository]
Longitudinal Assessment of Abnormal Cortical Folding in Fetuses and Neonates With Isolated Non-Severe Ventriculomegaly.
Journal: Brain and behavior
Authors' code: urrand/perinatal-pipeline (no license), urrand/LongitudinalAnalysis (no license)
Status: code verified, 18 files readable, 4 matches
[990] doi:10.1093/gigascience/giaf053 [paper, repository]
Cross-modal contrastive learning decodes developmental regulatory features through chromatin potential analysis.
Journal: GigaScience
Authors' code: melobio/attune (GPL-3.0)
Status: code verified, 37 files readable, 17 matches
[991] doi:10.1177/17448069251376189 [paper, repository]
Long-term effects on functional brain networks in adolescents treated for lumbar disc herniation.
Journal: Molecular pain
Authors' code: kipain/back2brain-connectivity (GPL-3.0)
Status: code verified, 6 files readable
[992] doi:10.12688/wellcomeopenres.24911.2 [paper, data]
Maternal and child immune profiles are associated with neurometabolite measures of early-life neuroinflammation in children who are HIV-exposed and uninfected: a South African birth cohort.
Journal: Wellcome open research
Status: data only, 1 dataset cited

2025 (2 papers)

[993] doi:10.7554/elife.100605 [paper, repository]
Age-related changes in ‘cortical’ 1/f dynamics are linked to cardiac activity
Journal: n/a
Authors' code: schmidtfa/cardiac_1_f (BSD-3-Clause), schmidtfa/ecg_1f_memory (BSD-3-Clause)
Status: code verified, 62 files readable, 11 matches
[994] doi:10.1186/s13023-025-04055-x [paper, data]
GRIN2B-related neurodevelopmental disorders: genotype-phenotype correlations and therapeutic implications
Journal: n/a
Status: data only, 1 dataset cited

Monday, 30 December 2024 (2 papers)

[995] doi:10.1038/s41598-024-82070-x [paper, data]
Prenatal gene-environment interactions mediate the impact of advanced maternal age on mouse offspring behavior.
Journal: Scientific reports
Status: data only, 1 dataset cited
[996] doi:10.1371/journal.pone.0316378 [paper, repository]
Bayesian polygenic risk estimation approach to nuclear families with discordant sib-pairs for myelomeningocele.
Journal: PloS one
Authors' code: supp:PMC11684611/pone.0316378.s004.R (no license)
Status: code verified, 1 file readable, 1 match

Saturday, 28 December 2024 (1 paper)

[997] doi:10.1101/2024.12.28.630576 [paper, repository]
Calcium dynamics tune timing of developmental transitions to generate evolutionarily divergent axon tract lengths
Journal: bioRxiv (preprint)
Authors' code: Zenodo 14562107 (CC-BY-4.0), Zenodo 14562113 (CC-BY-4.0)
Status: code verified, 2 files readable

Thursday, 26 December 2024 (1 paper)

[998] doi:10.1523/eneuro.0224-24.2024 [paper, repository]
Neonatal Brain Injury Triggers Niche-Specific Changes to Cellular Biogeography.
Journal: eNeuro
Authors' code: keon-arbabi/spatial_hypoxia (no license)
Status: code verified, 3 files readable, 3 matches

Wednesday, 25 December 2024 (1 paper)

[999] doi:10.3390/toxics13010010 [paper, repository]
Clearing the Air on Pollutant Disruptions of the Gut-Brain Axis: Developmental Exposure to Benzo[a]pyrene Disturbs Zebrafish Behavior and the Gut Microbiome in Adults and Subsequent Generations.
Journal: Toxics
Status: code verified, 41 files readable, 13 matches

Monday, 23 December 2024 (2 papers)

[1000] doi:10.7554/elife.100260 [paper, repository]
The emergence of visual category representations in infants' brains.
Journal: eLife
Authors' code: vpnl/floc (no license), VPNL/InfantObjectCategorization (no license)
Status: code verified, 47 files readable, 5 matches
[1001] doi:10.3389/fphar.2024.1473213 [paper, data]
Chronic nicotine exposure induces molecular and transcriptomic endophenotypes associated with mood and anxiety disorders in a cerebral organoid neurodevelopmental model.
Journal: Frontiers in pharmacology
Status: data only, 1 dataset cited

Friday, 20 December 2024 (1 paper)

[1002] doi:10.1038/s42003-024-07396-8 [paper, repository]
Sex-specific fear acquisition following early life stress is linked to amygdala and hippocampal purine and glutamate metabolism.
Journal: Communications biology
Authors' code: Zenodo 14237774 (CC-BY-4.0)
Status: code verified, 1 file readable, 1 match

Wednesday, 18 December 2024 (4 papers)

[1003] doi:10.1098/rsob.240250 [paper, repository]
The modified elevated gap interaction test: a novel paradigm to assess social preference.
Journal: Open biology
Authors' code: saptera/MEGIT (AGPL-3.0), doi:10.6084/m9.figshare.c.7569522 (no license)
Status: code verified, 24 files readable, 1 match
[1004] doi:10.7554/elife.103973 [paper, repository]
<i>Drosulfakinin</i> signaling encodes early-life memory for adaptive social plasticity.
Journal: eLife
Authors' code: taejoonlab/tracking-fly (CC0-1.0), KJKwon/2023_FlyBehavior (MIT), jstaf/fly_tracker (BSD-3-Clause)
Status: code verified, 52 files readable, 1 match
[1005] doi:10.1016/j.dcn.2024.101493 [paper, repository]
EEG-based brain age prediction in infants-toddlers: Implications for early detection of neurodevelopmental disorders.
Journal: Developmental cognitive neuroscience
Authors' code: OSF u3gp4 (no license)
Status: code verified, 30 files readable, 23 matches
[1006] doi:10.1016/j.dcn.2024.101492 [paper, repository]
Sports participation &amp; childhood neurocognitive development.
Journal: Developmental cognitive neuroscience
Authors' code: OSF q5wyx (no license)
Status: code verified, 10 files readable, 14 matches

Monday, 16 December 2024 (2 papers)

[1007] doi:10.1111/1556-4029.15677 [paper, repository]
Potential postmortem microbial biomarkers of infant and younger children death investigation.
Journal: Journal of forensic sciences
Authors' code: jenpechal/pmm-pediatric (no license)
Status: empty repository, 1 file readable
[1008] doi:10.7717/peerj.18679 [paper, data]
Association between hand grip strength and quality of life in children with cerebral palsy: a cross-sectional study.
Journal: PeerJ
Status: data only, 1 dataset cited

Sunday, 15 December 2024 (1 paper)

[1009] doi:10.3390/genes15121602 [paper, repository]
Transfer RNA Levels Are Tuned to Support Differentiation During Drosophila Neurogenesis.
Journal: Genes
Authors' code: rhondene/codon-usage-in-python (no license)
Status: code verified, 29 files readable, 2 matches

Friday, 13 December 2024 (3 papers)

[1010] doi:10.7554/elife.98081 [paper, data]
A human forebrain organoid model reveals the essential function of GTF2IRD1-TTR-ERK axis for the neurodevelopmental deficits of Williams syndrome.
Journal: eLife
Status: data only, 1 dataset cited
[1011] doi:10.1371/journal.pdig.0000678 [paper, repository]
Neonatal apnea and hypopnea prediction in infants with Robin sequence with neural additive models for time series.
Journal: PLOS digital health
Status: code verified, 13 files readable, 11 matches
[1012] doi:10.1002/mrm.30403 [paper, repository]
T&lt;sub&gt;1&lt;/sub&gt; and T&lt;sub&gt;2&lt;/sub&gt; measurements of the neonatal brain at 7 T.
Journal: Magnetic resonance in medicine
Status: code verified, 19 files readable

Thursday, 12 December 2024 (2 papers)

[1013] doi:10.1016/j.dcn.2024.101487 [paper, data]
Co-developing sleep-wake and sensory foundations for cognition in the human fetus and newborn.
Journal: Developmental cognitive neuroscience
Status: data only, 2 datasets cited
[1014] doi:10.1016/j.dcn.2024.101490 [paper, data]
How will developmental neuroimaging contribute to the prediction of neurodevelopmental or psychiatric disorders? Challenges and opportunities.
Journal: Developmental cognitive neuroscience
Status: data only, 1 dataset cited

Wednesday, 11 December 2024 (2 papers)

[1015] doi:10.1098/rsif.2024.0414 [paper, repository]
Dynamics of positional information in the vertebrate neural tube.
Journal: Journal of the Royal Society, Interface
Authors' code: doi:10.6084/m9.figshare.c.7533478 (no license)
Status: code found, still to be checked
[1016] doi:10.3389/fdata.2024.1429910 [paper, repository]
Application of a localized morphometrics approach to imaging-derived brain phenotypes for genotype-phenotype associations in pediatric mental health and neurodevelopmental disorders.
Journal: Frontiers in big data
Authors' code: wilmsm/localizedssm (Apache-2.0)
Status: code verified, 7 files readable

Tuesday, 10 December 2024 (1 paper)

[1017] doi:10.1159/000542793 [paper, data]
Urinary Lactate-To-Creatinine Ratio during the First Days of Life Correlates with the Degree of Brain Damage in Premature Infants.
Journal: Neonatology
Status: data only, 1 dataset cited

Monday, 9 December 2024 (5 papers)

[1018] doi:10.7554/elife.96020 [paper, repository]
Cross-species alignment along the chronological axis reveals evolutionary effect on structural development of the human brain.
Journal: eLife
Authors' code: kustlpbr/jiaojianwang-lab (no license)
Status: code verified, 47 files readable, 2 matches
[1019] doi:10.1038/s41592-024-02555-5 [paper, repository]
Multiplexing cortical brain organoids for the longitudinal dissection of developmental traits at single-cell resolution.
Journal: Nature methods
Status: code verified, 35 files readable, 9 matches
[1020] doi:10.1556/2006.2024.00068 [paper, repository]
The longitudinal association between reward processing and symptoms of video game addiction in the Adolescent Brain Cognitive Development Study.
Journal: Journal of behavioral addictions
Authors' code: Daniel-Adan-Lopez/ABCD_Gaming (no license)
Status: empty repository, 1 file readable
[1021] doi:10.1016/j.isci.2024.111549 [paper, repository]
Zebrafish glial-vascular interactions progressively expand over the course of brain development.
Journal: iScience
Authors' code: O-Brown-lab/2024GliaContacts (MIT)
Status: code verified, 3 files readable
[1022] doi:10.1016/j.isci.2024.111548 [paper, repository]
Neonatal infection with <i>Bordetella pertussis</i> promotes autism-like phenotypes in mice.
Journal: iScience
Authors' code: doi:10.5061/dryad.vq83bk43q (no license)
Status: code verified

Thursday, 5 December 2024 (1 paper)

[1023] doi:10.1016/j.stem.2024.11.002 [paper]
Human adult neurogenesis loss corresponds with cognitive decline during epilepsy progression.
Journal: Cell stem cell
Status: code on request

Wednesday, 4 December 2024 (2 papers)

[1024] doi:10.1038/s41467-024-55008-0 [paper, repository]
Edge-centric connectome-genetic markers of bridging factor to comorbidity between depression and anxiety.
Journal: Nature communications
Authors' code: OSF nu32z (no license), mingruixia/MDD_ConnectomeGradient (no license), neurospider.cn/post/62271 (no license), brain-networks (no license), csie.ntu.edu.tw/~cjlin/libsvm (no license)
Status: code verified, 57 files readable, 3 matches
[1025] doi:10.1016/j.xcrm.2024.101845 [paper, repository]
The neonatal gut microbiota: A role in the encephalopathy of prematurity.
Journal: Cell reports. Medicine
Authors' code: BioMedIA/dhcp-structural-pipeline (Apache-2.0)
Status: code verified, 1,250 files readable, 2 matches

Tuesday, 3 December 2024 (1 paper)

[1026] doi:10.7554/elife.87992 [paper, repository]
Multimodal neural correlates of childhood psychopathology.
Journal: eLife
Status: code verified, 2,039 files readable, 8 matches

Monday, 2 December 2024 (1 paper)

[1027] doi:10.1073/pnas.2405448121 [paper, repository]
Prenatal social disadvantage is associated with alterations in functional networks at birth.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: empty repository, 1 file readable

Sunday, 1 December 2024 (2 papers)

[1028] doi:10.1093/scan/nsae080 [paper, repository]
Neural empathy mechanisms are shared for physical and social pain, and increase from adolescence to older adulthood.
Journal: Social cognitive and affective neuroscience
Authors' code: OSF f9c2r (no license)
Status: code verified, 7 files readable, 1 match
[1029] doi:10.1002/brb3.70180 [paper]
Investigating Task-Free Functional Connectivity Patterns in Newborns Using Functional Near-Infrared Spectroscopy.
Journal: Brain and behavior
Status: code on request

Friday, 29 November 2024 (1 paper)

[1030] doi:10.1186/s12974-024-03311-4 [paper, data]
Impact of perinatal factors on T cells and transcriptomic changes in preterm infant brain injury.
Journal: Journal of neuroinflammation
Status: data only, 3 datasets cited

Tuesday, 26 November 2024 (1 paper)

[1031] doi:10.1016/j.ynirp.2024.100226 [paper, repository]
Neonatal inflammation and near-term white matter microstructure in infants born very preterm.
Journal: Neuroimage. Reports
Authors' code: vistalab/RTP-pipeline (no license)
Status: code verified, 33 files readable

Monday, 25 November 2024 (2 papers)

[1032] doi:10.1186/s12916-024-03784-3 [paper, repository]
Hierarchical individual variation and socioeconomic impact on personalized functional network topography in children.
Journal: BMC medicine
Authors' code: spin-test/spin-test (MIT), CuiLabCIBR/SingleFuncParcel_ABCD (no license)
Status: code verified, 168 files readable, 3 matches
[1033] doi:10.21203/rs.3.rs-5397645/v1 [paper, data]
Evaluation of fetal exposure to environmental noise using a computer-generated model
Journal: Research Square (preprint)
Status: data only, 2 datasets cited

Friday, 22 November 2024 (3 papers)

[1034] doi:10.7554/elife.87083 [paper, repository]
Switching of RNA splicing regulators in immature neuroblasts during adult neurogenesis.
Journal: eLife
Authors' code: achicheportiche/bernou2024 (CC0-1.0)
Status: code verified, 9 files readable, 6 matches
[1035] doi:10.1038/s44319-024-00316-1 [paper, data]
The DNA demethylase TET1 modifies the impact of maternal folic acid status on embryonic brain development.
Journal: EMBO reports
Status: data only, 1 dataset cited
[1036] doi:10.1016/j.ydbio.2024.11.009 [paper, data]
Spatiotemporal characterization of cyclooxygenase pathway enzymes during vertebrate embryonic development.
Journal: Developmental biology
Status: data only, 1 dataset cited

Wednesday, 20 November 2024 (2 papers)

[1037] doi:10.1098/rspb.2024.1433 [paper, repository]
The nature of label-induced categories: preverbal infants represent surface features and category symbols.
Journal: Proceedings. Biological sciences
Authors' code: OSF f8xtv (no license), doi:10.6084/m9.figshare.c.7504623 (no license)
Status: code found, still to be checked
[1038] doi:10.3389/fped.2024.1471080 [paper, repository]
Fetal gestational age prediction via shape descriptors of cortical development.
Journal: Frontiers in pediatrics
Status: code verified, 1,498 files readable

Tuesday, 19 November 2024 (3 papers)

[1039] doi:10.1186/s12866-024-03643-4 [paper]
Brain injury in premature infants may be related to abnormal colonization of early gut microbiome.
Journal: BMC microbiology
Status: data only
[1040] doi:10.1371/journal.pbio.3002909 [paper, repository]
Trajectories of human brain functional connectome maturation across the birth transition.
Journal: PLoS biology
Authors' code: Zenodo 13984128 (CC-BY-4.0), Zenodo 17109779 (CC-BY-4.0), Zenodo 13905953 (CC-BY-4.0), Zenodo 14051966 (CC-BY-4.0)
Status: code verified
[1041] doi:10.1016/j.isci.2024.111429 [paper]
Sex- and brain region-specific alterations in brain volume in germ-free mice.
Journal: iScience
Status: code on request

Monday, 18 November 2024 (1 paper)

[1042] doi:10.1162/imag_a_00373 [paper]
Longitudinal functional brain connectivity maturation in premature newborn infants: Modulatory influence of early music enrichment.
Journal: Imaging neuroscience (Cambridge, Mass.)
Status: code on request

Saturday, 16 November 2024 (1 paper)

[1043] doi:10.1016/j.dcn.2024.101478 [paper, repository]
Associations between mesolimbic connectivity, and alcohol use from adolescence to adulthood.
Journal: Developmental cognitive neuroscience
Authors' code: OSF 4y8st (no license)
Status: code verified

Thursday, 14 November 2024 (1 paper)

[1044] doi:10.1038/s41598-024-78979-y [paper, repository]
Analysis of the impact of deep learning know-how and data in modelling neonatal EEG.
Journal: Scientific reports
Status: code verified, 3 files readable

Wednesday, 13 November 2024 (1 paper)

[1045] doi:10.1080/15592294.2024.2426952 [paper, data]
Sex and tissue-specificity of piRNA regulation in adult mice following perinatal lead (Pb) exposure.
Journal: Epigenetics
Status: data only, 1 dataset cited

Monday, 11 November 2024 (1 paper)

[1046] doi:10.1073/pnas.2413409121 [paper, repository]
Functional alterations of the magnocellular subdivision of the visual sensory thalamus in autism.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: OSF w7pr4 (no license)
Status: code verified

Friday, 8 November 2024 (3 papers)

[1047] doi:10.1126/sciadv.adq5652 [paper, data]
Dynamic overrepresentation of accumbal cues in food- and opioid-seeking rats after prenatal THC exposure.
Journal: Science advances
Status: data only, 1 dataset cited
[1048] doi:10.1038/s41467-024-54034-2 [paper, repository]
Molecular signatures of cortical expansion in the human foetal brain.
Journal: Nature communications
Authors' code: garedaba/micro-brain (MIT), Zenodo 13917290 (CC-BY-4.0), doi:10.12751/g-node.qj5hs7 (no license)
Status: code verified, 40 files readable, 30 matches
[1049] doi:10.1016/j.bpsgos.2024.100413 [paper, data]
GABA/Glutamate Neuron Differentiation Imbalance and Increased AKT/mTOR Signaling in CNTNAP2<sup>-/-</sup> Cerebral Organoids.
Journal: Biological psychiatry global open science
Status: data only, 12 datasets cited

Thursday, 7 November 2024 (2 papers)

[1050] doi:10.1038/s41398-024-03175-5 [paper, repository]
Identification of a DNA methylation signature in whole blood of newborn guinea pigs and human neonates following antenatal betamethasone exposure.
Journal: Translational psychiatry
Authors' code: bkim-lab/DNAm (no license)
Status: dead link
[1051] doi:10.1016/j.crmeth.2024.100897 [paper, data]
Generation of self-renewing neuromesodermal progenitors with neuronal and skeletal muscle bipotential from human embryonic stem cells.
Journal: Cell reports methods
Status: code on request, 1 dataset cited

Wednesday, 6 November 2024 (1 paper)

[1052] doi:10.3389/fnmol.2024.1459877 [paper, data]
Exposure to the antiretroviral drug dolutegravir impairs structure and neurogenesis in a forebrain organoid model of human embryonic cortical development.
Journal: Frontiers in molecular neuroscience
Status: data only, 1 dataset cited

Tuesday, 5 November 2024 (1 paper)

[1053] doi:10.1016/j.dcn.2024.101473 [paper, data]
Disentangling the unique contributions of age, pubertal stage, and pubertal hormones to brain structure in childhood and adolescence.
Journal: Developmental cognitive neuroscience
Status: data only, 1 dataset cited

Monday, 4 November 2024 (3 papers)

[1054] doi:10.7554/elife.96155 [paper, data]
Age-related decline in blood-brain barrier function is more pronounced in males than females in parietal and temporal regions.
Journal: eLife
Status: code on request, 1 dataset cited
[1055] doi:10.1002/advs.202407137 [paper, data]
Molecular Lineages and Spatial Distributions of Subplate Neurons in the Human Fetal Cerebral Cortex.
Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)
Status: data only, 1 dataset cited
[1056] doi:10.1038/s41598-024-77609-x [paper, data]
TATPat based explainable EEG model for neonatal seizure detection.
Journal: Scientific reports
Status: data only, 1 dataset cited

Friday, 1 November 2024 (6 papers)

[1057] doi:10.1093/brain/awae185 [paper, data]
Biallelic null variants in PNPLA8 cause microcephaly by reducing the number of basal radial glia.
Journal: Brain : a journal of neurology
Status: data only, 1 dataset cited
[1058] doi:10.1093/scan/nsae072 [paper, repository]
Proximity within adolescent peer networks predicts neural similarity during affective experience.
Journal: Social cognitive and affective neuroscience
Authors' code: OSF svbpq (no license)
Status: code verified, 2 files readable, 2 matches
[1059] doi:10.1371/journal.pone.0312822 [paper, repository]
Multilabel SegSRGAN-A framework for parcellation and morphometry of preterm brain in MRI.
Journal: PloS one
Authors' code: Zenodo 12659424 (cecill-b)
Status: code verified
[1060] doi:10.1371/journal.pone.0313192 [paper, data]
Customization of neonatal functional magnetic resonance imaging: A preclinical phantom-based study.
Journal: PloS one
Status: data only, 1 dataset cited
[1061] doi:10.1093/nar/gkae950 [paper, repository]
Recruitment of homodimeric proneural factors by conserved CAT-CAT E-boxes drives major epigenetic reconfiguration in cortical neurogenesis.
Journal: Nucleic acids research
Authors' code: SantpereLab/neurog2-neurod2-neurogenesis (no license), Zenodo 13898345 (CC-BY-4.0)
Status: code verified, 28 files readable, 12 matches
[1062] doi:10.1002/brb3.70157 [paper, repository]
Clustering Electrophysiological Predisposition to Binge Drinking: An Unsupervised Machine Learning Analysis.
Journal: Brain and behavior
Authors' code: scikit-learn.org/stable/modules (no license)
Status: code verified

Monday, 28 October 2024 (1 paper)

[1063] doi:10.1159/000542276 [paper, data]
Ex vivo Magnetic Resonance Imaging of the Human Fetal Brain.
Journal: Developmental neuroscience
Status: data only, 1 dataset cited

Friday, 25 October 2024 (1 paper)

[1064] doi:10.1161/jaha.124.035880 [paper, repository]
Structural Covariance Networks in the Fetal Brain Reveal Altered Neurodevelopment for Specific Subtypes of Congenital Heart Disease.
Journal: Journal of the American Heart Association
Authors' code: hub.docker.com/r/fetalsvrtk (no license)
Status: code verified

Thursday, 24 October 2024 (1 paper)

[1065] doi:10.7554/elife.90893 [paper, repository]
Increasing adult-born neurons protects mice from epilepsy.
Journal: eLife
Authors' code: OSF vftng (no license), OSF ak6u9 (no license), OSF 2yz97 (no license), OSF tkeu5 (no license), OSF gyst4 (no license), OSF pcngt (no license), OSF 2r5ej (no license), OSF 7tj2x (no license)
Status: empty repository

Wednesday, 23 October 2024 (3 papers)

[1066] doi:10.1017/s0033291724002174 [paper, repository]
Associations between polygenic scores for cognitive and non-cognitive factors of educational attainment and measures of behavior, psychopathology, and neuroimaging in the adolescent brain cognitive development study.
Journal: Psychological medicine
Authors' code: WashU-BG/ABCD_cog_non_cog_2023 (no license)
Status: code verified, 7 files readable, 1 match
[1067] doi:10.1038/s41380-024-02794-0 [paper, data]
Maternal dysbiosis produces long-lasting behavioral changes in offspring.
Journal: Molecular psychiatry
Status: data only, 1 dataset cited
[1068] doi:10.1016/j.dcn.2024.101467 [paper, data]
The brain's structural connectivity and pre-reading abilities in young children with prenatal alcohol exposure.
Journal: Developmental cognitive neuroscience
Status: data only, 1 dataset cited

Tuesday, 22 October 2024 (2 papers)

[1069] doi:10.1371/journal.pbio.3002610 [paper, repository]
Functional reorganization of brain regions supporting artificial grammar learning across the first half year of life.
Journal: PLoS biology
Status: code verified, 16 files readable, 3 matches
[1070] doi:10.1038/s43856-024-00623-7 [paper, repository]
Advanced three-dimensional X-ray imaging unravels structural development of the human thymus compartments.
Journal: Communications medicine
Authors' code: aleatzeni/SmartInterpol (no license)
Status: code verified, 1,244 files readable

Monday, 21 October 2024 (1 paper)

[1071] doi:10.1038/s41467-024-53254-w [paper, repository]
Developmental mouse brain common coordinate framework.
Journal: Nature communications
Authors' code: figshare 26492122 (CC-BY-4.0), Zenodo 12853683 (CC-BY-4.0), Zenodo 12854081 (CC-BY-4.0), yongsookimlab/devccf (CC-BY-4.0), yongsookimlab/devccf_ccfv3_mapping (BSD-2-Clause)
Status: code verified, 144 files readable, 8 matches

Sunday, 20 October 2024 (1 paper)

[1072] doi:10.1016/j.heliyon.2024.e39455 [paper, data]
Metagenome mining divulges virulent and multidrug resistant &lt;i&gt;Pseudomonas aeruginosa&lt;/i&gt; ST242 and &lt;i&gt;Klebsiella michiganensis&lt;/i&gt; ST∗1b23 coinfecting an 8-month-old meningitis infant under ICU in Kampala, Uganda, East Africa.
Journal: Heliyon
Status: data only, 4 datasets cited

Saturday, 19 October 2024 (1 paper)

[1073] doi:10.1080/15592294.2024.2416345 [paper, data]
Parental arsenic exposure and tissue-specific DNA methylation in Bangladeshi infants with spina bifida.
Journal: Epigenetics
Status: data only, 1 dataset cited

Friday, 18 October 2024 (4 papers)

[1074] doi:10.7554/elife.94520 [paper, repository]
The ketone body β-hydroxybutyrate ameliorates neurodevelopmental deficits in the GABAergic system of <i>daf-18/PTEN Caenorhabditis elegans</i> mutants.
Journal: eLife
Authors' code: andresgarelli/vimbaperon (GPL-3.0)
Status: code verified, 3 files readable
[1075] doi:10.7554/elife.94970 [paper, repository]
Population clustering of structural brain aging and its association with brain development.
Journal: eLife
Status: code verified, 159 files readable, 2 matches
[1076] doi:10.1016/j.dcn.2024.101463 [paper, data]
Delay discounting in adolescence depends on whom you wait for: Evidence from a functional neuroimaging study.
Journal: Developmental cognitive neuroscience
Status: data only, 1 dataset cited
[1077] doi:10.1016/j.heliyon.2024.e39535 [paper, data]
Toe1 promotes proliferation and differentiation of neural progenitor cells.
Journal: Heliyon
Status: data only, 1 dataset cited

Thursday, 17 October 2024 (1 paper)

[1078] doi:10.1038/s41467-024-53354-7 [paper, repository]
Spatiotemporal cerebral blood flow dynamics underlies emergence of the limbic-sensorimotor-association cortical gradient in human infancy.
Journal: Nature communications
Authors' code: haohuanglab/infant_rCBF_dynamics (no license), asotiras/brainparts (other), Zenodo 13625828 (CC-BY-4.0), mhouyang/infant_rcbf_dynamics (no license)
Status: code verified, 17 files readable

Wednesday, 16 October 2024 (3 papers)

[1079] doi:10.1038/s41598-024-75986-x [paper, data]
Maternal e-cigarette exposure alters DNA methylome, site-specific CpG and CH methylation, and transcriptomic signatures in the neonatal brain.
Journal: Scientific reports
Status: data only, 1 dataset cited
[1080] doi:10.1016/j.xhgg.2024.100372 [paper]
LSM7 variants involving key amino acids for LSM complex function cause a neurodevelopmental disorder with leukodystrophy and cerebellar atrophy.
Journal: HGG advances
Status: code on request
[1081] doi:10.3390/microorganisms12102071 [paper, data]
Comparative Analysis of Fecal Microbiota Between Adolescents with Early-Onset Psychosis and Adults with Schizophrenia.
Journal: Microorganisms
Status: data only, 1 dataset cited

Tuesday, 15 October 2024 (2 papers)

[1082] doi:10.1038/s42003-024-06991-z [paper, repository]
Functional MRI of imprinting memory in awake newborn domestic chicks.
Journal: Communications biology
Authors' code: mehdibehroozi/Imprinting-fMRI (no license)
Status: code verified, 11 files readable, 5 matches
[1083] doi:10.3389/fncom.2024.1478193 [paper, data]
Multi-scale asynchronous correlation and 2D convolutional autoencoder for adolescent health risk prediction with limited fMRI data.
Journal: Frontiers in computational neuroscience
Status: data only, 1 dataset cited

Monday, 14 October 2024 (1 paper)

[1084] doi:10.1159/000541918 [paper, data]
The Influence of Birth Weight, Socio-Economic Status, and Adult Health on Brain Volumes during Ageing.
Journal: Neuroepidemiology
Status: data only, 1 dataset cited

Saturday, 12 October 2024 (1 paper)

[1085] doi:10.3390/neurosci5040033 [paper, repository]
Resting-State Functional Connectivity Predicts Attention Problems in Children: Evidence from the ABCD Study.
Journal: NeuroSci
Authors' code: cran.r-project.org/web/packages (no license)
Status: code verified

Thursday, 10 October 2024 (3 papers)

[1086] doi:10.1126/science.adq1456 [paper, repository]
Somatic mosaicism in schizophrenia brains reveals prenatal mutational processes.
Journal: Science (New York, N.Y.)
Authors' code: bsmn/bsmn-pipeline (no license), bintriz/bsmn-aws-setup (no license), tewhey-lab/MPRA_oligo_barcode_pipeline (MIT), tewhey-lab/MPRAmodel (no license), emauryg/scz_somatic_snv (no license)
Status: code verified, 109 files readable, 10 matches
[1087] doi:10.1038/s42003-024-06956-2 [paper, data]
The genetics of spatiotemporal variation in cortical thickness in youth.
Journal: Communications biology
Status: code on request, 1 dataset cited
[1088] doi:10.1016/j.mex.2024.102997 [paper, repository]
Combination of motor, sensory and affective tasks in an EEG paradigm for children with developmental disabilities.
Journal: MethodsX
Authors' code: fms205/arthromotor (no license)
Status: code verified, 4 files readable, 1 match

Tuesday, 8 October 2024 (3 papers)

[1089] doi:10.1073/pnas.2320805121 [paper, repository]
Adolescent alcohol consumption predicted by differences in electrophysiological functional connectivity and neuroanatomy.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: OSF r5u4s (no license), rbruna/meeg_analysis (GPL-3.0)
Status: code verified, 489 files readable, 10 matches
[1090] doi:10.1038/s41598-024-74766-x [paper, data]
Atypical gut microbiota composition in a mouse model of developmental stuttering.
Journal: Scientific reports
Status: data only, 1 dataset cited
[1091] doi:10.3390/children11101221 [paper]
Differential Neural Mechanisms of Feedback Processing in Children with Developmental Language Disorder: An Examination of Midfrontal Theta Connectivity.
Journal: Children (Basel, Switzerland)
Status: code on request

Monday, 7 October 2024 (1 paper)

[1092] doi:10.1093/braincomms/fcae356 [paper, repository]
Individualized cortical gyrification in neonates with congenital heart disease.
Journal: Brain communications
Authors' code: ralidimitrova/GPR_NeoVols (MIT)
Status: code verified, 3 files readable

Friday, 4 October 2024 (2 papers)

[1093] doi:10.1038/s43856-024-00622-8 [paper, repository]
Parasagittal dural volume correlates with cerebrospinal fluid volume and developmental delay in children with autism spectrum disorder.
Journal: Communications medicine
Authors' code: figshare 24582369 (CC-BY-4.0)
Status: code verified
[1094] doi:10.1186/s13229-024-00620-6 [paper, repository]
Structure-function coupling in white matter uncovers the hypoconnectivity in autism spectrum disorder.
Journal: Molecular autism
Authors' code: Jfortin1/ComBatHarmonization (no license), zhaolab205/ASD-FCT-DT-consistency (no license)
Status: code verified, 25 files readable, 1 match

Tuesday, 1 October 2024 (4 papers)

[1095] doi:10.1162/netn_a_00384 [paper, repository]
A Bayesian incorporated linear non-Gaussian acyclic model for multiple directed graph estimation to study brain emotion circuit development in adolescence.
Journal: Network neuroscience (Cambridge, Mass.)
Authors' code: Aiying0512/BiLiNGAM (no license), Aiying0512 (no license)
Status: code verified, 4 files readable, 1 match
[1096] doi:10.1162/netn_a_00378 [paper, repository]
Developmental differences in canonical cortical networks: Insights from microstructure-informed tractography.
Journal: Network neuroscience (Cambridge, Mass.)
Authors' code: daducci/COMMIT (other)
Status: code verified, 41 files readable
[1097] doi:10.1096/fj.202401696r [paper, data]
Selective depletion of kisspeptin neurons in the hypothalamic arcuate nucleus in early juvenile life reduces pubertal LH secretion and delays puberty onset in mice.
Journal: FASEB journal : official publication of the Federation of American Societies for Experimental Biology
Status: data only, 1 dataset cited
[1098] doi:10.1002/hbm.70010 [paper, repository]
Developmental patterns of inhibition and fronto-basal-ganglia white matter organisation in healthy children and children with attention-deficit/hyperactivity disorder.
Journal: Human brain mapping
Authors' code: fredvbrug/STOP-IT (no license), MervSingh/Longitudinal_SST_FBA_ADHD (no license)
Status: code verified, 93 files readable, 18 matches

Monday, 30 September 2024 (8 papers)

[1099] doi:10.1242/dev.202973 [paper, data]
Retinoic acid, an essential component of the roof plate organizer, promotes the spatiotemporal segregation of dorsal neural fates.
Journal: Development (Cambridge, England)
Status: data only, 3 datasets cited
[1100] doi:10.1242/dev.202764 [paper, data]
Developmental emergence of first- and higher-order thalamic neuron molecular identities.
Journal: Development (Cambridge, England)
Status: data only, 1 dataset cited
[1101] doi:10.1038/s41419-024-07088-5 [paper, data]
SALL2 regulates neural differentiation of mouse embryonic stem cells through Tuba1a.
Journal: Cell death & disease
Status: data only, 1 dataset cited
[1102] doi:10.1038/s41539-024-00270-6 [paper, repository]
Structural and transcriptional signatures of arithmetic abilities in children.
Journal: NPJ science of learning
Authors' code: Dzhang1989z/MathDeveloping (no license)
Status: code verified, 3 files readable
[1103] doi:10.1038/s41593-024-01769-2 [paper, repository]
Proinflammatory immune cells disrupt angiogenesis and promote germinal matrix hemorrhage in prenatal human brain.
Journal: Nature neuroscience
Authors' code: LehtinenLab/Shipley2020 (no license)
Status: code verified, 46 files readable
[1104] doi:10.1038/s41380-024-02764-6 [paper, repository]
A functional parcellation of the whole brain in high-functioning individuals with autism spectrum disorder reveals atypical patterns of network organization.
Journal: Molecular psychiatry
Authors' code: OSF yt87z (no license), persichetti-lab/FunMaps (no license)
Status: code verified, 8 files readable, 1 match
[1105] doi:10.1186/s11689-024-09573-6 [paper, data]
Association between rare, genetic variants linked to autism and ultrasonography fetal anomalies in children with autism spectrum disorder.
Journal: Journal of neurodevelopmental disorders
Status: data only, 1 dataset cited
[1106] doi:10.3390/cells13191634 [paper, repository]
Alternative Balance between Transcriptional and Epigenetic Regulation during Developmental Proliferation of Human Cranial Neural Crest Cells.
Journal: Cells
Authors' code: bioinform (no license), cdesterke/CNCC_scripts (no license)
Status: code verified, 10 files readable, 10 matches

Friday, 27 September 2024 (1 paper)

[1107] doi:10.1016/j.jaacop.2024.09.008 [paper, data]
COVID-19 Pandemic-Related Prenatal Distress and Infant Functional Brain Development.
Journal: JAACAP open
Status: data only, 1 dataset cited

Wednesday, 25 September 2024 (1 paper)

[1108] doi:10.3389/fnut.2024.1456111 [paper, repository]
Maternal oral probiotic use is associated with decreased breastmilk inflammatory markers, infant fecal microbiome variation, and altered recognition memory responses in infants-a pilot observational study.
Journal: Frontiers in nutrition
Status: code verified, 1 file readable

Tuesday, 24 September 2024 (2 papers)

[1109] doi:10.1159/000541217 [paper, data]
No Short-Term Effect of Low-Dose Nicotine on Inflammation after Global Hypoxia in Newborn Piglets.
Journal: Neonatology
Status: data only, 1 dataset cited
[1110] doi:10.1016/j.dcn.2024.101455 [paper, repository]
Brain structures with stronger genetic associations are not less associated with family- and state-level economic contexts.
Journal: Developmental cognitive neuroscience
Authors' code: OSF mg63h (no license)
Status: code verified, 8 files readable

Monday, 23 September 2024 (1 paper)

[1111] doi:10.1016/j.dcn.2024.101443 [paper, data]
Psychiatric neuroimaging at a crossroads: Insights from psychiatric genetics.
Journal: Developmental cognitive neuroscience
Status: data only, 1 dataset cited

Wednesday, 18 September 2024 (2 papers)

[1112] doi:10.1371/journal.pbio.3002653 [paper, repository]
Functional network modules overlap and are linked to interindividual connectome differences during human brain development.
Journal: PLoS biology
Status: code verified, 8 files readable, 2 matches
[1113] doi:10.1016/j.dcn.2024.101447 [paper, data]
The development and structure of the HEALthy Brain and Child Development (HBCD) Study EEG protocol.
Journal: Developmental cognitive neuroscience
Status: data only, 1 dataset cited

Tuesday, 17 September 2024 (2 papers)

[1114] doi:10.1038/s42003-024-06876-1 [paper, repository]
Identifying individual brain development using multimodality brain network.
Journal: Communications biology
Authors' code: thomaskoenig.ch/index.php/software (no license), fil.ion.ucl.ac.uk/spm (no license), nitrc.org/projects/conn (no license)
Status: code verified
[1115] doi:10.1093/braincomms/fcae318 [paper, repository]
Children born very preterm experience altered cortical expansion over the first decade of life.
Journal: Brain communications
Authors' code: BioMedIA/MIRTK (Apache-2.0)
Status: code verified, 708 files readable, 3 matches

Monday, 16 September 2024 (2 papers)

[1116] doi:10.1111/acer.15440 [paper]
Alcohol and fear conditioning produce strain-specific changes in the dorsal hippocampal transcriptome of adolescent C57BL/6J and DBA/2J mice.
Journal: Alcohol, clinical & experimental research
Status: data only
[1117] doi:10.1371/journal.pone.0310165 [paper, repository]
Persistent homology reveals robustness loss in inhaled substance abuse rs-fMRI networks.
Journal: PloS one
Authors' code: MartinMij/TDA-of-networks (no license)
Status: code verified, 5 files readable

Thursday, 12 September 2024 (1 paper)

[1118] doi:10.1038/s41467-024-52366-7 [paper, repository]
Regional patterns of human cortex development correlate with underlying neurobiology.
Journal: Nature communications
Authors' code: LeonDLotter/CTdev (CC-BY-NC-SA-4.0), Zenodo 7902901 (other-open), Zenodo 7901282 (other-open), Zenodo 6884932 (other-nc)
Status: code verified, 51 files readable, 14 matches

Wednesday, 11 September 2024 (5 papers)

[1119] doi:10.1038/s41467-024-52242-4 [paper, repository]
Prenatal environment is associated with the pace of cortical network development over the first three years of life.
Journal: Nature communications
Status: code verified, 35 files readable, 17 matches
[1120] doi:10.1186/s12916-024-03610-w [paper, repository]
Between faces: childhood adversity is associated with reduced threat-safety discrimination during facial expression processing in adolescence.
Journal: BMC medicine
Status: code verified, 24 files readable, 3 matches
[1121] doi:10.1098/rsos.240765 [paper, data]
Brain shapes of large-bodied, flightless ratites (Aves: Palaeognathae) emerge through distinct developmental allometries.
Journal: Royal Society open science
Status: data only, 3 datasets cited
[1122] doi:10.1016/j.isci.2024.110917 [paper, repository]
Olanzapine enhances early brain maturation through activation of the NODAL/FOXH1 axis.
Journal: iScience
Authors' code: db.cngb.org (no license)
Status: code verified
[1123] doi:10.1162/imag_a_00244 [paper, repository]
Whole-head high-density diffuse optical tomography to map infant audio-visual responses to social and non-social stimuli.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: DOT-HUB (no license)
Status: code verified

Tuesday, 10 September 2024 (2 papers)

[1124] doi:10.1073/pnas.2321008121 [paper, data]
Leader-follower dynamics during early social interactions matter for infant word learning.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited
[1125] doi:10.1038/s41431-024-01680-1 [paper, data]
Genomic Balancing Act: deciphering DNA rearrangements in the complex chromosomal aberration involving 5p15.2, 2q31.1, and 18q21.32.
Journal: European journal of human genetics : EJHG
Status: data only, 1 dataset cited

Monday, 9 September 2024 (2 papers)

[1126] doi:10.1073/pnas.2403200121 [paper, repository]
COVID-19 lockdown effects on adolescent brain structure suggest accelerated maturation that is more pronounced in females than in males.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: Zenodo 13227189 (CC-BY-4.0), nevacorr/Adolescent_Normative_Modeling_CT_2024 (no license)
Status: code verified, 39 files readable, 5 matches
[1127] doi:10.1038/s41598-024-71309-2 [paper, repository]
Neurodevelopmental imprints of sociomarkers in adolescent brain connectomes.
Journal: Scientific reports
Authors' code: optuna/optuna-examples (MIT)
Status: code verified, 79 files readable

Saturday, 7 September 2024 (1 paper)

[1128] doi:10.1016/j.jbc.2024.107749 [paper, repository]
Profiling metabolome of mouse embryonic cerebrospinal fluid following maternal immune activation.
Journal: The Journal of biological chemistry
Status: code verified, 5 files readable, 2 matches

Friday, 6 September 2024 (2 papers)

[1129] doi:10.1016/j.neuroimage.2024.120827 [paper, repository]
Neurodevelopmental subtypes of functional brain organization in the ABCD study using a rigorous analytic framework.
Journal: NeuroImage
Authors' code: nda.nih.gov (no license), jakederosa123/neuro_dev_rsfc_subtypes_abcd- (no license)
Status: code verified, 35 files readable, 16 matches
[1130] doi:10.1016/j.isci.2024.110895 [paper, repository]
Microbiota-dependent early-life programming of gastrointestinal motility.
Journal: iScience
Authors' code: doi:10.17632/snpf8f2tcx.1 (no license), alexdobin/STAR (MIT)
Status: code verified, 331 files readable

Thursday, 5 September 2024 (1 paper)

[1131] doi:10.7554/elife.97150 [paper, repository]
A robust brain network for sustained attention from adolescence to adulthood that predicts later substance use.
Journal: eLife
Authors' code: OSF 6ejpd (no license), YiheWeng/Weng_eLife_2024_scripts (MIT)
Status: code verified, 16 files readable, 7 matches

Wednesday, 4 September 2024 (1 paper)

[1132] doi:10.1093/braincomms/fcae250 [paper, repository]
Neural response to monetary incentives in acquired adolescent depression after mild traumatic brain injury: Stage 2 Registered Report.
Journal: Brain communications
Authors' code: OSF h5uba (no license)
Status: empty repository

Tuesday, 3 September 2024 (1 paper)

[1133] doi:10.1073/pnas.2321965121 [paper, repository]
Depressive symptoms during the transition to adolescence: Left hippocampal volume as a marker of social context sensitivity.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: matmarti-nu/SEE-LHV-MDD (no license)
Status: code verified, 3 files readable, 6 matches

Monday, 2 September 2024 (1 paper)

[1134] doi:10.1186/s13041-024-01138-x [paper, data]
Running-induced neurogenesis reduces CA1 perineuronal net density without substantial temporal delay.
Journal: Molecular brain
Status: data only, 1 dataset cited

Thursday, 29 August 2024 (2 papers)

[1135] doi:10.1186/s12859-024-05874-8 [paper, repository]
CNVDeep: deep association of copy number variants with neurocognitive disorders.
Journal: BMC bioinformatics
Authors' code: hamidrokny/SNATCNV (GPL-3.0), git.dml.ir/z_rahaie/dcnv (no license), autism.mindspec.org/autdb (no license), ebi.ac.uk/ega/studies (no license), ncbi.nlm.nih.gov/dbvar/studies (no license)
Status: code verified, 6 files readable
[1136] doi:10.1016/j.xpro.2024.103280 [paper]
Protocol for generating human cortical organoids enriched in outer radial glia by guided differentiation.
Journal: STAR protocols
Status: code on request

Wednesday, 28 August 2024 (4 papers)

[1137] doi:10.1038/s41467-024-51821-9 [paper, repository]
Developmental signals control chromosome segregation fidelity during pluripotency and neurogenesis by modulating replicative stress.
Journal: Nature communications
Authors' code: vincentvbatenburg/scEdU-seq (no license)
Status: code verified, 9 files readable, 1 match
[1138] doi:10.1038/s41467-024-51627-9 [paper, repository]
Endocranial development in non-avian dinosaurs reveals an ontogenetic brain trajectory distinct from extant archosaurs.
Journal: Nature communications
Authors' code: Zenodo 11194015 (MIT)
Status: code verified, 1 file readable, 4 matches
[1139] doi:10.1038/s41598-024-69199-5 [paper, data]
Multi-scaling allometry in human development, mammalian morphology, and tree growth.
Journal: Scientific reports
Status: data only, 1 dataset cited
[1140] doi:10.1016/j.nbd.2024.106653 [paper, repository]
Neurovascular mechanisms of cognitive aging: Sex-related differences in the average progression of arteriosclerosis, white matter atrophy, and cognitive decline.
Journal: Neurobiology of disease
Authors' code: OSF q3sxj (no license)
Status: code verified, 8 files readable, 3 matches

Tuesday, 27 August 2024 (1 paper)

[1141] doi:10.1073/pnas.2401604121 [paper, repository]
Nonreciprocal synchronization in embryonic oscillator ensembles.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: code verified, 5 files readable, 1 match

Monday, 26 August 2024 (2 papers)

[1142] doi:10.1186/s12916-024-03542-5 [paper, data]
Antenatal steroids elicited neurodegenerative-associated transcriptional changes in the hippocampus of preterm fetal sheep independent of lung maturation.
Journal: BMC medicine
Status: data only, 1 dataset cited
[1143] doi:10.3389/fncom.2024.1434421 [paper, data]
Deep learning for detecting prenatal alcohol exposure in pediatric brain MRI: a transfer learning approach with explainability insights.
Journal: Frontiers in computational neuroscience
Status: data only, 1 dataset cited

Thursday, 22 August 2024 (3 papers)

[1144] doi:10.1038/s41467-024-51310-z [paper, data]
Loss of symmetric cell division of apical neural progenitors drives DENND5A-related developmental and epileptic encephalopathy.
Journal: Nature communications
Status: data only, 1 dataset cited
[1145] doi:10.1038/s41539-024-00262-6 [paper, repository]
Integrating stereotypes and factual evidence in interpersonal communication.
Journal: NPJ science of learning
Authors' code: OSF 3fre2 (no license)
Status: empty repository
[1146] doi:10.1016/j.neuroimage.2024.120806 [paper, repository]
Separating group- and individual-level brain signatures in the newborn functional connectome: A deep learning approach.
Journal: NeuroImage
Authors' code: libilab/rsfMRI-VAE (no license)
Status: code verified, 137 files readable, 1 match

Wednesday, 21 August 2024 (1 paper)

[1147] doi:10.1098/rsob.240115 [paper, data]
A feather star is born: embryonic development and nervous system organization in the crinoid &lt;i&gt;Antedon mediterranea&lt;/i&gt;.
Journal: Open biology
Status: data only, 2 datasets cited

Tuesday, 20 August 2024 (4 papers)

[1148] doi:10.1101/gr.279044.124 [paper, repository]
Reference-informed prediction of alternative splicing and splicing-altering mutations from sequences.
Journal: Genome research
Authors' code: chaolinzhanglab/DeltaSplice (MIT)
Status: code verified, 32 files readable, 2 matches
[1149] doi:10.1371/journal.pone.0307406 [paper, repository]
Childhood family socioeconomic status is linked to adult brain electrophysiology.
Journal: PloS one
Authors' code: OSF 43h75 (no license)
Status: code verified, 34 files readable, 14 matches
[1150] doi:10.3390/v16081330 [paper, data]
Application of diceCT to Study the Development of the Zika Virus-Infected Mouse Brain.
Journal: Viruses
Status: data only, 1 dataset cited
[1151] doi:10.1038/s44271-024-00131-3 [paper, repository]
Infants evaluate informativeness of evidence and predict causal events as revealed in theta oscillations and predictive looking.
Journal: Communications psychology
Authors' code: OSF zxcn4 (no license)
Status: empty repository

Monday, 19 August 2024 (1 paper)

[1152] doi:10.1162/imag_a_00269 [paper]
Childhood adversity predicts striatal functional connectivity gradient changes after acute stress.
Journal: Imaging neuroscience (Cambridge, Mass.)
Status: code on request

Friday, 16 August 2024 (3 papers)

[1153] doi:10.1038/s41467-024-51290-0 [paper, repository]
Motor innervation directs the correct development of the mouse sympathetic nervous system.
Journal: Nature communications
Authors' code: LouisFaure/glialfates_paper (no license), ipoverennaya/motor_nerve_paper (no license)
Status: code verified, 15 files readable, 7 matches
[1154] doi:10.1038/s41598-024-69575-1 [paper, repository]
Distinct functional connectivity patterns during naturalistic learning by adolescent first versus second language speakers.
Journal: Scientific reports
Authors' code: OSF 2yuex (no license)
Status: empty repository
[1155] doi:10.3389/ftox.2024.1374866 [paper, data]
Effect of altered production and storage of dopamine on development and behavior in <i>C. elegans</i>.
Journal: Frontiers in toxicology
Status: data only, 1 dataset cited

Wednesday, 14 August 2024 (1 paper)

[1156] doi:10.1371/journal.pone.0298717 [paper, data]
Sex-dependent effects of Setd1a haploinsufficiency on development and adult behaviour.
Journal: PloS one
Status: data only, 1 dataset cited

Saturday, 10 August 2024 (1 paper)

[1157] doi:10.1016/j.dadr.2024.100271 [paper, repository]
Longitudinal tracking of alcohol expectancies and their associations with impulsivity in alcohol naïve youth in the adolescent brain cognitive development (ABCD) study.
Journal: Drug and alcohol dependence reports
Status: code verified, 2 files readable, 2 matches

Friday, 9 August 2024 (2 papers)

[1158] doi:10.1073/pnas.2314074121 [paper, repository]
Human adolescent brain similarity development is different for paralimbic versus neocortical zones.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: code verified, 15 files readable, 4 matches
[1159] doi:10.3389/fnins.2024.1400963 [paper, data]
Single-cell RNA sequencing of aging neural progenitors reveals loss of excitatory neuron potential and a population with transcriptional immune response.
Journal: Frontiers in neuroscience
Status: data only, 1 dataset cited

Wednesday, 7 August 2024 (2 papers)

[1160] doi:10.1038/s41467-024-48897-8 [paper, data]
Male autism spectrum disorder is linked to brain aromatase disruption by prenatal BPA in multimodal investigations and 10HDA ameliorates the related mouse phenotype.
Journal: Nature communications
Status: data only, 1 dataset cited
[1161] doi:10.1038/s41398-024-03035-2 [paper, repository]
Associations of alcohol and tobacco use with psychotic, depressive and developmental disorders revealed via multimodal neuroimaging.
Journal: Translational psychiatry
Authors' code: trendscenter.org/software/fit (no license)
Status: code verified

Tuesday, 6 August 2024 (1 paper)

[1162] doi:10.1038/s41598-024-68821-w [paper]
Effects of maternal exposure to biomass cooking fuel on birth size and body proportionality in full-term infants born by vaginal delivery.
Journal: Scientific reports
Status: code on request

Monday, 5 August 2024 (2 papers)

[1163] doi:10.1073/pnas.2405636121 [paper, repository]
Naturally occurring horse model of miscarriage reveals temporal relationship between chromosomal aberration type and point of lethality.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: deMestre-lab/Pregnancy-Loss-Genetics (no license), Zenodo 12745505 (no license), Zenodo 12745506 (CC-BY-4.0)
Status: code verified, 6 files readable, 2 matches
[1164] doi:10.1038/s41598-024-68071-w [paper, data]
Epigenetic associations with neonatal age in infants born very preterm, particularly among genes involved in neurodevelopment.
Journal: Scientific reports
Status: data only, 1 dataset cited

Saturday, 3 August 2024 (2 papers)

[1165] doi:10.1038/s41598-024-68467-8 [paper, repository]
Passively sensing smartphone use in teens with rates of use by sex and across operating systems.
Journal: Scientific reports
Authors' code: tinyurl.com/3hutza88 (no license)
Status: code verified
[1166] doi:10.1016/j.dcn.2024.101427 [paper, data]
Trauma's distinctive and combined effects on subsequent substance use, mental health, and neurocognitive functioning with the NCANDA sample.
Journal: Developmental cognitive neuroscience
Status: data only, 1 dataset cited

Friday, 2 August 2024 (2 papers)

[1167] doi:10.2147/ndt.s454370 [paper, data]
Abnormal Serum BDNF and p-mTOR in MDD in Adolescents with Childhood Trauma.
Journal: Neuropsychiatric disease and treatment
Status: data only, 1 dataset cited
[1168] doi:10.3389/frcha.2024.1410804 [paper, repository]
Understanding psychotic-like experiences in children in the context of dimensions of psychological problems.
Journal: Frontiers in child and adolescent psychiatry
Authors' code: VU-BRAINS-lab/ABCD-PLE (no license)
Status: empty repository

Thursday, 1 August 2024 (5 papers)

[1169] doi:10.1093/schbul/sbae083 [paper, repository]
Genetic Implication of Prenatal GABAergic and Cholinergic Neuron Development in Susceptibility to Schizophrenia.
Journal: Schizophrenia bulletin
Status: code verified, 29 files readable, 13 matches
[1170] doi:10.1002/hbm.26754 [paper, repository]
Large-scale analysis of structural brain asymmetries during neurodevelopment: Associations with age and sex in 4265 children and adolescents.
Journal: Human brain mapping
Authors' code: mathworks.com/products/matlab (no license)
Status: code verified
[1171] doi:10.1038/s43856-024-00576-x [paper, repository]
Exposure to multiple ambient air pollutants changes white matter microstructure during early adolescence with sex-specific differences.
Journal: Communications medicine
Authors' code: figshare 25928728 (CC-BY-4.0)
Status: code verified, 5 files readable
[1172] doi:10.3390/s24154979 [paper, data]
EEG Functional Connectivity Analysis for the Study of the Brain Maturation in the First Year of Life.
Journal: Sensors (Basel, Switzerland)
Status: data only, 1 dataset cited
[1173] doi:10.1001/jamanetworkopen.2024.30711 [paper, repository]
Latent Profiles of Childhood Adversity, Adolescent Mental Health, and Neural Network Connectivity.
Journal: JAMA network open
Authors' code: Zenodo 2692522 (other-open), lgoetschius/gimme_preprocessing (MIT)
Status: code verified, 44 files readable

Wednesday, 31 July 2024 (1 paper)

[1174] doi:10.1016/j.dcn.2024.101425 [paper, data]
Multi-site EEG studies in early infancy: Methods to enhance data quality.
Journal: Developmental cognitive neuroscience
Status: data only, 1 dataset cited

Tuesday, 30 July 2024 (2 papers)

[1175] doi:10.1038/s41467-024-50699-x [paper, repository]
Adult neurogenesis improves spatial information encoding in the mouse hippocampus.
Journal: Nature communications
Authors' code: Zenodo 10985968 (CC-BY-4.0), GoncalvesLab/Frechou-et-al-Neurogenesis (no license), Zenodo 10986236 (CC-BY-4.0)
Status: code verified, 26 files readable, 5 matches
[1176] doi:10.1038/s44319-024-00205-7 [paper, data]
The Derlin-1-Stat5b axis maintains homeostasis of adult hippocampal neurogenesis.
Journal: EMBO reports
Status: data only, 2 datasets cited

Monday, 29 July 2024 (1 paper)

[1177] doi:10.1523/eneuro.0125-24.2024 [paper, repository]
Early-Life Resource Scarcity in Mice Does Not Alter Adult Corticosterone or Preovulatory Luteinizing Hormone Surge Responses to Acute Psychosocial Stress.
Journal: eNeuro
Authors' code: um-mip/coding-project (no license), gibson-amandag/LBN (no license)
Status: code verified, 225 files readable, 15 matches

Saturday, 27 July 2024 (1 paper)

[1178] doi:10.1016/j.isci.2024.110600 [paper]
HDAC1 and HDAC2 orchestrate Wnt signaling to regulate neural progenitor transition during brain development.
Journal: iScience
Status: code on request

Friday, 26 July 2024 (1 paper)

[1179] doi:10.1016/j.xcrm.2024.101659 [paper, repository]
Isogenic patient-derived organoids reveal early neurodevelopmental defects in spinal muscular atrophy initiation.
Journal: Cell reports. Medicine
Status: code verified, 3 files readable, 4 matches

Thursday, 25 July 2024 (1 paper)

[1180] doi:10.1101/2024.07.25.605128 [paper, repository]
Environmental stiffness regulates neuronal maturation via Piezo1-mediated TTR activity
Journal: bioRxiv (preprint)
Status: code verified, 90 files readable

Tuesday, 23 July 2024 (2 papers)

[1181] doi:10.1073/pnas.2403212121 [paper, repository]
Sex and mental health are related to subcortical brain microstructure.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: ABCD-STUDY (no license), ABCD-STUDY/RSI (MIT)
Status: code verified, 4 files readable
[1182] doi:10.1016/j.bpsgos.2024.100367 [paper, repository]
Dynamic Functional Connectivity Correlates of Trait Mindfulness in Early Adolescence.
Journal: Biological psychiatry global open science
Authors' code: OSF 3gwt9 (no license)
Status: code verified, 6 files readable, 1 match

Monday, 22 July 2024 (1 paper)

[1183] doi:10.1371/journal.pone.0306857 [paper, data]
Optimal image quality and radiation doses with optimal tube voltages/currents for pediatric anthropomorphic phantom brains.
Journal: PloS one
Status: data only, 1 dataset cited

Saturday, 20 July 2024 (1 paper)

[1184] doi:10.1016/j.neuroimage.2024.120734 [paper, repository]
High-resolution diffusion magnetic resonance imaging and spatial-transcriptomic in developing mouse brain.
Journal: NeuroImage
Authors' code: selinahxy/developingmousebraindmri (no license)
Status: code verified, 3 files readable

Friday, 19 July 2024 (1 paper)

[1185] doi:10.1007/s40519-024-01675-3 [paper, repository]
Cortical thickness and childhood eating behaviors: differences according to sex and age, and relevance for eating disorders.
Journal: Eating and weight disorders : EWD
Status: code verified, 4 files readable

Thursday, 18 July 2024 (2 papers)

[1186] doi:10.1523/eneuro.0117-24.2024 [paper, repository]
Cortical Face-Selective Responses Emerge Early in Human Infancy.
Journal: eNeuro
Authors' code: OSF h7rbv (no license)
Status: code verified, 5 files readable, 2 matches
[1187] doi:10.1111/cdev.14124 [paper, data]
Olfactory-to-visual facilitation in the infant brain declines gradually from 4 to 12 months.
Journal: Child development
Status: data only, 1 dataset cited

Wednesday, 17 July 2024 (1 paper)

[1188] doi:10.1162/imag_a_00236 [paper, repository]
Apnoea suppresses brain activity in infants.
Journal: Imaging neuroscience (Cambridge, Mass.)
Status: code verified, 6 files readable, 7 matches

Tuesday, 16 July 2024 (2 papers)

[1189] doi:10.1088/1741-2552/ad5c04 [paper, repository]
A machine learning artefact detection method for single-channel infant event-related potential studies.
Journal: Journal of neural engineering
Authors' code: Zenodo 11474626 (CC-BY-4.0), simonmarchant/eeg-artefact-detection (GPL-3.0)
Status: code verified, 70 files readable, 9 matches
[1190] doi:10.12688/wellcomeopenres.21282.1 [paper, data]
Improving infant Neurocognitive Development and Growth Outcomes with micronutrients (INDiGO): A protocol for an efficacy trial in rural Gambia.
Journal: Wellcome open research
Status: data only, 1 dataset cited

Monday, 15 July 2024 (1 paper)

[1191] doi:10.1038/s41467-024-50305-0 [paper, repository]
Investigating grey matter volumetric trajectories through the lifespan at the individual level.
Journal: Nature communications
Status: code verified, 10 files readable, 4 matches

Friday, 12 July 2024 (2 papers)

[1192] doi:10.1242/dev.202435 [paper, data]
Evolutionary conservation of VSX2 super-enhancer modules in retinal development.
Journal: Development (Cambridge, England)
Status: data only, 1 dataset cited
[1193] doi:10.1126/sciadv.adn4202 [paper, repository]
Functional brain networks are associated with both sex and gender in children.
Journal: Science advances
Authors' code: Zenodo 10779163 (CC-BY-4.0), elvisha/sg_predictions (MIT)
Status: code verified, 8 files readable, 4 matches

Thursday, 11 July 2024 (3 papers)

[1194] doi:10.1038/s41586-024-07773-7 [paper, repository]
De novo variants in the RNU4-2 snRNA cause a frequent neurodevelopmental syndrome.
Journal: Nature
Status: code verified, 18 files readable, 4 matches
[1195] doi:10.1016/j.mex.2024.102861 [paper, repository]
Estimation of human body 3D pose for parent-infant interaction settings using azure Kinect and OpenPose.
Journal: MethodsX
Status: code verified, 509 files readable, 4 matches
[1196] doi:10.1016/j.isci.2024.110488 [paper]
Parallel signatures of cognitive maturation in primate antisaccade performance and prefrontal activity.
Journal: iScience
Status: code on request

Wednesday, 10 July 2024 (2 papers)

[1197] doi:10.1038/s41467-024-50204-4 [paper, repository]
Developmental trajectories of EEG aperiodic and periodic components in children 2-44 months of age.
Journal: Nature communications
Authors' code: OSF u3gp4 (no license)
Status: code verified, 30 files readable, 14 matches
[1198] doi:10.3389/fnins.2024.1404009 [paper, data]
Male mice are susceptible to brain dysfunction induced by early-life acephate exposure.
Journal: Frontiers in neuroscience
Status: data only, 1 dataset cited

Tuesday, 9 July 2024 (2 papers)

[1199] doi:10.1038/s41467-024-50183-6 [paper, data]
The mouse multi-organ proteome from infancy to adulthood.
Journal: Nature communications
Status: data only, 1 dataset cited
[1200] doi:10.1038/s42003-024-06504-y [paper, repository]
Estimating the total variance explained by whole-brain imaging for zero-inflated outcomes.
Journal: Communications biology
Authors' code: junting-ren/ZIV (no license), Zenodo 11479618 (CC-BY-4.0)
Status: code verified, 32 files readable, 9 matches

Monday, 8 July 2024 (2 papers)

[1201] doi:10.1523/eneuro.0007-24.2024 [paper]
Trauma in Neonatal Acute Brain Slices Alters Calcium and Network Dynamics and Causes Calpain-Mediated Cell Death.
Journal: eNeuro
Status: code on request
[1202] doi:10.1162/imag_a_00201 [paper, repository]
Developmental trajectories of the default mode, frontoparietal, and salience networks from the third trimester through the newborn period.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: bioimagesuiteweb.github.io/webapp (no license)
Status: code verified

Friday, 5 July 2024 (3 papers)

[1203] doi:10.1073/pnas.2400596121 [paper]
Adult neurogenesis is necessary for functional regeneration of a forebrain neural circuit.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: code on request
[1204] doi:10.1186/s13064-024-00189-z [paper, repository]
scMultiome analysis identifies a single caudal hindbrain compartment in the developing zebrafish nervous system.
Journal: Neural development
Authors' code: zfin.org (no license), rebeccaorourke-cu/Sagerstrom_CHB_SC_r6 (no license)
Status: code verified, 13 files readable, 6 matches
[1205] doi:10.3389/fnhum.2024.1370572 [paper, data]
Predicting language outcome at birth.
Journal: Frontiers in human neuroscience
Status: data only, 1 dataset cited

Wednesday, 3 July 2024 (1 paper)

[1206] doi:10.1186/s13059-024-03327-2 [paper, data]
SETDB1 regulates short interspersed nuclear elements and chromatin loop organization in mouse neural precursor cells.
Journal: Genome biology
Status: data only, 1 dataset cited

Tuesday, 2 July 2024 (2 papers)

[1207] doi:10.1038/s41598-024-65833-4 [paper, repository]
Behavioral and neural responses to social exclusion in women: the role of facial attractiveness and friendliness.
Journal: Scientific reports
Authors' code: BUCANL/EEG-IP-L (GPL-2.0)
Status: code verified, 30 files readable
[1208] doi:10.1038/s41598-024-66106-w [paper]
Zona incerta mediates early life isoflurane-induced fear memory deficits.
Journal: Scientific reports
Status: code on request

Monday, 1 July 2024 (2 papers)

[1209] doi:10.1093/scan/nsae044 [paper, repository]
Early adolescent perceived friendship quality aids affective and neural responses to social inclusion and exclusion in young adults with and without adverse childhood experiences.
Journal: Social cognitive and affective neuroscience
Authors' code: repository.cam.ac.uk (no license)
Status: code verified
[1210] doi:10.1038/s41467-024-49684-1 [paper, data]
CTCF mutation at R567 causes developmental disorders via 3D genome rearrangement and abnormal neurodevelopment.
Journal: Nature communications
Status: data only, 6 datasets cited

Saturday, 29 June 2024 (1 paper)

[1211] doi:10.1186/s13148-024-01701-2 [paper, repository]
Epigenetic scores derived in saliva are associated with gestational age at birth.
Journal: Clinical epigenetics
Authors' code: OSF 4jnfv (no license)
Status: empty repository

Friday, 28 June 2024 (1 paper)

[1212] doi:10.1162/imag_a_00206 [paper, repository]
The neural correlates of response inhibition across the transition from infancy to toddlerhood: An fNIRS study.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: figshare 13258814 (CC-BY-4.0), nitrc.org/projects/homer2 (no license), DOT-HUB (no license)
Status: code verified, 17 files readable

Thursday, 27 June 2024 (1 paper)

[1213] doi:10.1111/jcpp.14028 [paper, data]
Prenatal maternal infections and early childhood developmental outcomes: analysis of linked administrative health data for Greater Glasgow &amp; Clyde, Scotland.
Journal: Journal of child psychology and psychiatry, and allied disciplines
Status: data only, 1 dataset cited

Wednesday, 26 June 2024 (1 paper)

[1214] doi:10.1016/j.xpro.2024.103157 [paper, repository]
Protocol for quantitative reconstruction of cell lineage using mosaic analysis with double markers in mice.
Journal: STAR protocols
Authors' code: supp:PMC11260041/mmc1.zip (no license)
Status: empty repository

Tuesday, 25 June 2024 (2 papers)

[1215] doi:10.1038/s41598-024-65610-3 [paper, repository]
The zebrafish gut microbiome influences benzo[a]pyrene developmental neurobehavioral toxicity.
Journal: Scientific reports
Authors' code: kstagaman/sharpton-lab-dada2-pipeline (no license), aalexiev/BaP_16S (no license)
Status: code verified, 41 files readable, 17 matches
[1216] doi:10.1111/jora.12993 [paper, data]
Transcendent thinking counteracts longitudinal effects of mid-adolescent exposure to community violence in the anterior cingulate cortex.
Journal: Journal of research on adolescence : the official journal of the Society for Research on Adolescence
Status: data only, 1 dataset cited

Monday, 24 June 2024 (2 papers)

[1217] doi:10.1038/s41593-024-01652-0 [paper, repository]
Single-cell epigenomic reconstruction of developmental trajectories from pluripotency in human neural organoid systems.
Journal: Nature neuroscience
Authors' code: ratschlab/scim (LGPL-3.0), quadbiolab/organoid_epigenomics (no license), Zenodo 10964284 (CC-BY-4.0), quadbio/organoid_epigenomics (no license)
Status: code verified, 185 files readable, 28 matches
[1218] doi:10.1016/j.isci.2024.110352 [paper, repository]
A novel developmental critical period of orexinergic signaling in the primary visual thalamus.
Journal: iScience
Authors' code: madeleinea/KilosortPLX (no license)
Status: code verified, 68 files readable, 2 matches

Sunday, 23 June 2024 (1 paper)

[1219] doi:10.3390/biology13070464 [paper, data]
Modification of Keratin Integrations and the Associated Morphogenesis in Frizzling Chicken Feathers.
Journal: Biology
Status: data only, 1 dataset cited

Friday, 21 June 2024 (1 paper)

[1220] doi:10.1038/s41526-024-00411-6 [paper]
Physical exercise restores adult neurogenesis deficits induced by simulated microgravity.
Journal: NPJ microgravity
Status: data only

Thursday, 20 June 2024 (1 paper)

[1221] doi:10.7554/elife.93325 [paper, repository]
Spatial and temporal pattern of structure-function coupling of human brain connectome with development.
Journal: eLife
Authors' code: BMHLab/AHBAprocessing (no license), scikit-learn.org (no license), FelixFengCN/SC-FC-coupling-development (no license)
Status: code verified, 388 files readable, 4 matches

Tuesday, 18 June 2024 (2 papers)

[1222] doi:10.1038/s44319-024-00178-7 [paper, data]
PHF2-mediated H3K9me balance orchestrates heterochromatin stability and neural progenitor proliferation.
Journal: EMBO reports
Status: data only, 2 datasets cited
[1223] doi:10.1016/j.dcn.2024.101408 [paper, repository]
Transparency and reproducibility in the Adolescent Brain Cognitive Development (ABCD) study.
Journal: Developmental cognitive neuroscience
Status: empty repository, 1 file readable

Monday, 17 June 2024 (1 paper)

[1224] doi:10.3389/fnins.2024.1418694 [paper, data]
Effects of chronic light cycle disruption during adolescence on circadian clock, neuronal activity rhythms, and behavior in mice.
Journal: Frontiers in neuroscience
Status: data only, 1 dataset cited

Saturday, 15 June 2024 (2 papers)

[1225] doi:10.1038/s41467-024-49368-w [paper, data]
m&lt;sup&gt;5&lt;/sup&gt;C methylated lncRncr3-MeCP2 interaction restricts miR124a-initiated neurogenesis.
Journal: Nature communications
Status: data only, 1 dataset cited
[1226] doi:10.1016/j.neuro.2024.06.008 [paper, data]
Developmental exposure to the Fox River PCB mixture modulates behavior in juvenile mice.
Journal: Neurotoxicology
Status: data only, 1 dataset cited

Friday, 14 June 2024 (1 paper)

[1227] doi:10.7554/elife.92844 [paper, repository]
Identification and characterization of intermediate states in mammalian neural crest cell epithelial to mesenchymal transition and delamination.
Journal: eLife
Authors' code: jayunruh/Jay_Plugins (GPL-2.0)
Status: code verified, 664 files readable, 4 matches

Thursday, 13 June 2024 (1 paper)

[1228] doi:10.1038/s41598-024-64498-3 [paper, data]
Prenatal family income, but not parental education, is associated with resting brain activity in 1-month-old infants.
Journal: Scientific reports
Status: code on request, 1 dataset cited

Tuesday, 11 June 2024 (1 paper)

[1229] doi:10.1371/journal.pone.0305256 [paper, repository]
Postnatal maternal care moderates the effects of prenatal bisphenol exposure on offspring neurodevelopmental, behavioral, and transcriptomic outcomes.
Journal: PloS one
Authors' code: lapphe/raspberry_rat (no license), lapphe/automated_anxiety (no license), SLauby/bisphenols_maternalcare_tagseq (no license), z0on/tag-based_RNAseq (no license)
Status: code verified, 51 files readable, 7 matches

Monday, 10 June 2024 (2 papers)

[1230] doi:10.1159/000539607 [paper, repository]
The Fetal Spleen in Low-Risk Pregnancies and prior to Preterm Birth: Observational Study of the Role of Anatomical and Functional Magnetic Resonance Imaging.
Journal: Fetal diagnosis and therapy
Authors' code: SVRTK/SVRTK (Apache-2.0)
Status: code verified, 69 files readable
[1231] doi:10.1016/j.dcn.2024.101401 [paper, repository]
Neuroadaptive Bayesian optimisation to study individual differences in infants' engagement with social cues.
Journal: Developmental cognitive neuroscience
Authors' code: OSF 8yfv2 (no license)
Status: empty repository

Saturday, 8 June 2024 (2 papers)

[1232] doi:10.1038/s41390-024-03288-z [paper, repository]
Associations between perinatal risk and physical health in pre-adolescence in the Adolescent Brain Cognitive Development (ABCD) Study®: the unexpected relationship with sleep disruption.
Journal: Pediatric research
Authors' code: ABCD-STUDY (no license)
Status: code verified
[1233] doi:10.1038/s44271-024-00105-5 [paper, repository]
Cortical signatures of auditory looming bias show cue-specific adaptation between newborns and young adults.
Journal: Communications psychology
Authors' code: OSF 4gdy2 (no license)
Status: code verified, 15 files readable, 9 matches

Friday, 7 June 2024 (2 papers)

[1234] doi:10.1016/j.dcn.2024.101405 [paper, repository]
Longitudinal associations between language network characteristics in the infant brain and school-age reading abilities are mediated by early-developing phonological skills.
Journal: Developmental cognitive neuroscience
Authors' code: xiyu-bnu/infant_restingstate_prediction (no license), XinyiTang16/LanNet_code (no license)
Status: code verified, 10 files readable, 4 matches
[1235] doi:10.1016/j.isci.2024.110195 [paper, data]
Spontaneous biases enhance generalization in the neonate brain.
Journal: iScience
Status: data only, 1 dataset cited

Thursday, 6 June 2024 (4 papers)

[1236] doi:10.1038/s41467-024-49139-7 [paper, data]
m6a methylation orchestrates IMP1 regulation of microtubules during human neuronal differentiation.
Journal: Nature communications
Status: data only, 2 datasets cited
[1237] doi:10.1038/s41598-024-63566-y [paper, repository]
Long-term impact of digital media on brain development in children.
Journal: Scientific reports
Authors' code: samniv/screentime-and-brain (no license)
Status: empty repository, 1 file readable
[1238] doi:10.1016/j.dcn.2024.101403 [paper, data]
Growing Up Together in Society (GUTS): A team science effort to predict societal trajectories in adolescence and young adulthood.
Journal: Developmental cognitive neuroscience
Status: data only, 1 dataset cited
[1239] doi:10.3390/brainsci14060584 [paper, repository]
Temporal-Posterior Alpha Power in Resting-State Electroencephalography as a Potential Marker of Complex Childhood Trauma in Institutionalized Adolescents.
Journal: Brain sciences
Authors' code: OSF kf4x5 (no license)
Status: code verified, 2 files readable

Wednesday, 5 June 2024 (2 papers)

[1240] doi:10.1159/000538986 [paper, data]
Brain MRI Injury Patterns across Gestational Age among Preterm Infants with Perinatal Asphyxia.
Journal: Neonatology
Status: data only, 1 dataset cited
[1241] doi:10.1038/s41467-024-47277-6 [paper, data]
Planum temporale asymmetry in newborn monkeys predicts the future development of gestural communication's handedness.
Journal: Nature communications
Status: data only, 1 dataset cited

Tuesday, 4 June 2024 (2 papers)

[1242] doi:10.7554/elife.94561 [paper, repository]
Tracking the neurodevelopmental trajectory of beta band oscillations with optically pumped magnetometer-based magnetoencephalography.
Journal: eLife
Status: code verified, 117 files readable, 12 matches
[1243] doi:10.7554/elife.90600 [paper, repository]
Adult-born granule cells modulate CA2 network activity during retrieval of developmental memories of the mother.
Journal: eLife
Authors' code: einaraz/SharpWaveRipple (MIT), Zenodo 7592606 (other-open)
Status: code verified, 6 files readable

Monday, 3 June 2024 (1 paper)

[1244] doi:10.1162/nol_a_00127 [paper, repository]
Differences in Cortical Surface Area in Developmental Language Disorder.
Journal: Neurobiology of language (Cambridge, Mass.)
Authors' code: OSF wmkrq (no license)
Status: code verified, 10 files readable, 2 matches

Saturday, 1 June 2024 (4 papers)

[1245] doi:10.1093/sleep/zsae048 [paper, repository]
Data-driven, generalizable prediction of adolescent sleep disturbances in the multisite Adolescent Brain Cognitive Development Study.
Journal: Sleep
Authors' code: SripadaLab/ABCD_sleep_disturbances_CCA (no license)
Status: code verified, 7 files readable, 4 matches
[1246] doi:10.1093/brain/awae059 [paper, data]
Localization of stuttering based on causal brain lesions.
Journal: Brain : a journal of neurology
Status: data only, 1 dataset cited
[1247] doi:10.1002/hbm.26717 [paper, repository]
Heritability of cerebellar subregion volumes in adolescent and young adult twins.
Journal: Human brain mapping
Status: code verified, 11 files readable, 6 matches
[1248] doi:10.1093/cercor/bhae246 [paper, repository]
The multiscale topological organization of the functional brain network in adolescent PTSD.
Journal: Cerebral cortex (New York, N.Y. : 1991)
Authors' code: Zenodo 8164459 (CC-BY-4.0)
Status: code verified, 32 files readable, 1 match

Thursday, 30 May 2024 (5 papers)

[1249] doi:10.1073/pnas.2318641121 [paper, repository]
In vivo whole-cortex marker of excitation-inhibition ratio indexes cortical maturation and cognitive ability in youth.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: thomasyeolab/cbig (MIT)
Status: code verified, 2,000 files readable, 1 match
[1250] doi:10.1371/journal.pone.0300720 [paper, repository]
Brain age monotonicity and functional connectivity differences of healthy subjects.
Journal: PloS one
Authors' code: sorooshyari/PLOS_ONE_2004 (no license)
Status: code verified, 4 files readable, 6 matches
[1251] doi:10.1038/s41419-024-06768-6 [paper, data]
Biallelic variants in CSMD1 are implicated in a neurodevelopmental disorder with intellectual disability and variable cortical malformations.
Journal: Cell death & disease
Status: data only, 1 dataset cited
[1252] doi:10.1016/j.ynstr.2024.100651 [paper, repository]
Adolescent environmental enrichment induces social resilience and alters neural gene expression in a selectively bred rodent model with anxious phenotype.
Journal: Neurobiology of stress
Status: code verified, 19 files readable, 4 matches
[1253] doi:10.1162/imag_a_00180 [paper, repository]
VINNA for neonates: Orientation independence through latent augmentations.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: deep-mi/VINNA4neonates (Apache-2.0)
Status: code verified, 29 files readable, 11 matches

Wednesday, 29 May 2024 (2 papers)

[1254] doi:10.3390/brainsci14060552 [paper, data]
Neonatal Physical Growth Predicts Electroencephalography Power in Rural South African Children.
Journal: Brain sciences
Status: data only, 1 dataset cited
[1255] doi:10.1016/j.isci.2024.110145 [paper]
Layer specific regulation of critical period timing and maturation of mouse visual cortex by endocannabinoids.
Journal: iScience
Status: code on request

Tuesday, 28 May 2024 (3 papers)

[1256] doi:10.1242/dev.202209 [paper, repository]
Investigating the basis of lineage decisions and developmental trajectories in the dorsal spinal cord through pseudotime analyses.
Journal: Development (Cambridge, England)
Authors' code: Zenodo 11154386 (CC-BY-4.0), Zenodo 11154385 (CC-BY-4.0)
Status: code verified, 34 files readable, 12 matches
[1257] doi:10.1073/pnas.2318740121 [paper, data]
Neuronal differentiation requires BRAT1 complex to remove REST from chromatin.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited
[1258] doi:10.1038/s41386-024-01891-6 [paper, repository]
Acute effects of different types of cannabis on young adult and adolescent resting-state brain networks.
Journal: Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology
Authors' code: OSF z638r (no license), OSF jg9qp (no license)
Status: empty repository

Monday, 27 May 2024 (1 paper)

[1259] doi:10.1038/s41562-024-01887-8 [paper, repository]
Evolutionary-developmental (evo-devo) dynamics of hominin brain size.
Journal: Nature human behaviour
Authors' code: Zenodo 10887414 (CC-BY-4.0), Zenodo 7801640 (CC-BY-4.0)
Status: code verified, 58 files readable, 14 matches

Saturday, 25 May 2024 (2 papers)

[1260] doi:10.1007/s00429-024-02792-6 [paper, repository]
Intelligence and cortical morphometry: caveats in brain-behavior associations.
Journal: Brain structure & function
Authors' code: vandadim/IQ_prediction (MIT), Zenodo 11121851 (MIT), Zenodo 11121850 (MIT)
Status: code verified, 18 files readable, 7 matches
[1261] doi:10.1159/000539506 [paper, data]
Structural and Functional Effects of C5aR1 Antagonism in a Rat Model of Neonatal Hypoxic-Ischemic Encephalopathy.
Journal: Developmental neuroscience
Status: data only, 1 dataset cited

Friday, 24 May 2024 (1 paper)

[1262] doi:10.1038/s44321-024-00073-7 [paper]
Neuraminidase inhibition promotes the collective migration of neurons and recovery of brain function.
Journal: EMBO molecular medicine
Status: data only

Thursday, 23 May 2024 (1 paper)

[1263] doi:10.1038/s41598-024-60968-w [paper]
Transfontanellar shear wave elastography of the neonatal brain for quantitative evaluation of white matter damage.
Journal: Scientific reports
Status: code on request

Wednesday, 22 May 2024 (3 papers)

[1264] doi:10.1371/journal.pone.0303086 [paper, data]
Neurophysiological, balance and motion evidence in adolescent idiopathic scoliosis: A systematic review.
Journal: PloS one
Status: data only, 1 dataset cited
[1265] doi:10.1016/j.isci.2024.110078 [paper, data]
Ciliogenesis defects after neurulation impact brain development and neuronal activity in larval zebrafish.
Journal: iScience
Status: code on request, 1 dataset cited
[1266] doi:10.1007/s42761-024-00237-1 [paper, repository]
Neural Reactivity to Social Reward Moderates the Association Between Social Media Use and Momentary Positive Affect in Adolescents.
Journal: Affective science
Authors' code: Kodiologist/Survivor (gnu)
Status: empty repository, 1 file readable

Monday, 20 May 2024 (1 paper)

[1267] doi:10.1162/imag_a_00154 [paper, data]
Few sex differences in regional gray matter volume growth trajectories across early childhood.
Journal: Imaging neuroscience (Cambridge, Mass.)
Status: code on request, 1 dataset cited

Saturday, 18 May 2024 (1 paper)

[1268] doi:10.1038/s41598-024-62051-w [paper, repository]
New insights into the effects of type and timing of childhood maltreatment on brain morphometry.
Journal: Scientific reports
Authors' code: OSF u98va (no license)
Status: code verified

Friday, 17 May 2024 (1 paper)

[1269] doi:10.1111/pcn.13675 [paper, repository]
Impact of a mindfulness-based intervention on neurobehavioral functioning and its association with large-scale brain networks in preterm young adolescents.
Journal: Psychiatry and clinical neurosciences
Authors' code: c4science.ch/source/icaps (no license)
Status: code found, still to be checked

Thursday, 16 May 2024 (1 paper)

[1270] doi:10.1038/s41380-024-02592-8 [paper]
Sex differences in trajectories of cortical development in autistic children from 2-13 years of age.
Journal: Molecular psychiatry
Status: code on request

Wednesday, 15 May 2024 (1 paper)

[1271] doi:10.3389/fpsyt.2024.1372106 [paper, data]
Depression proteomic profiling in adolescents with transcriptome analyses in independent cohorts.
Journal: Frontiers in psychiatry
Status: data only, 1 dataset cited

Tuesday, 14 May 2024 (1 paper)

[1272] doi:10.1038/s41380-024-02584-8 [paper, data]
Structural deviations of the posterior fossa and the cerebellum and their cognitive links in a neurodevelopmental deletion syndrome.
Journal: Molecular psychiatry
Status: code on request, 1 dataset cited

Monday, 13 May 2024 (1 paper)

[1273] doi:10.1016/j.bbi.2024.05.014 [paper, repository]
Examining longitudinal associations between prenatal exposure to infections and child brain morphology.
Journal: Brain, behavior, and immunity
Status: code verified, 5 files readable, 10 matches

Saturday, 11 May 2024 (1 paper)

[1274] doi:10.1016/j.dcn.2024.101389 [paper, repository]
Associations between behavioral and self-reported impulsivity, brain structure, and genetic influences in middle childhood.
Journal: Developmental cognitive neuroscience
Status: code found, still to be checked

Friday, 10 May 2024 (3 papers)

[1275] doi:10.1126/sciadv.adj8571 [paper, data]
An edge-simplicity bias in the visual input to young infants.
Journal: Science advances
Status: data only, 2 datasets cited
[1276] doi:10.1016/j.clinph.2024.05.002 [paper, repository]
Resting state electroencephalographic brain activity in neonates can predict age and is indicative of neurodevelopmental outcome.
Journal: Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology
Authors' code: Zenodo 10993300 (CC-BY-4.0), amirans65/brainagemodel (MIT)
Status: code verified, 26 files readable, 3 matches
[1277] doi:10.1162/imag_a_00165 [paper, repository]
Towards personalized precision functional mapping in infancy.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: DCAN-Labs/compare_matrices_to_assign_networks (other), DCAN-Labs/infant-abcd-bids-pipeline (BSD-3-Clause), DCAN-Labs/abcd-bids-tfmri-pipeline (BSD-3-Clause), OSF csuyb (no license), Zenodo 7683282 (other-open)
Status: code verified, 141 files readable, 15 matches

Wednesday, 8 May 2024 (1 paper)

[1278] doi:10.1186/s11689-024-09529-w [paper, repository]
Reduced lateralization of multiple functional brain networks in autistic males.
Journal: Journal of neurodevelopmental disorders
Status: code verified, 2,029 files readable, 9 matches

Tuesday, 7 May 2024 (1 paper)

[1279] doi:10.1038/s41556-024-01412-z [paper, repository]
Cerebral organoids display dynamic clonal growth and tunable tissue replenishment.
Journal: Nature cell biology
Authors' code: Cibiv/pyrganoid (no license)
Status: code verified, 40 files readable

Monday, 6 May 2024 (1 paper)

[1280] doi:10.1159/000539212 [paper, data]
Distinguishing Laterality in Brain Injury in Rabbit Fetal Magnetic Resonance Imaging Using Novel Volume Rendering Techniques.
Journal: Developmental neuroscience
Status: data only, 1 dataset cited

Friday, 3 May 2024 (1 paper)

[1281] doi:10.1038/s41467-024-47945-7 [paper, repository]
A human neural crest model reveals the developmental impact of neuroblastoma-associated chromosomal aberrations.
Journal: Nature communications
Authors' code: cancerbits/saldana_montano2024_ncnb (no license), Zenodo 10891507 (CC-BY-4.0)
Status: code verified, 136 files readable, 40 matches

Wednesday, 1 May 2024 (7 papers)

[1282] doi:10.1093/scan/nsae029 [paper, repository]
Exposure to community violence as a mechanism linking neighborhood socioeconomic disadvantage and neural responses to reward.
Journal: Social cognitive and affective neuroscience
Authors' code: UMich-Mind-Lab/pipeline-task-standard (no license)
Status: code verified, 41 files readable
[1283] doi:10.14814/phy2.16029 [paper, data]
Electrophysiological phenotyping of left ventricular noncompaction cardiomyopathy in pediatric populations: A systematic review.
Journal: Physiological reports
Status: data only, 1 dataset cited
[1284] doi:10.1016/j.xgen.2024.100556 [paper, repository]
Variant-to-function analysis of the childhood obesity chr12q13 locus implicates rs7132908 as a causal variant within the 3' UTR of FAIM2.
Journal: Cell genomics
Authors' code: macs3-project/MACS (BSD-3-Clause), bvoightlab/ColocQuiaL (GPL-3.0), scicrunch.org/resolver/scr_014966 (no license)
Status: code verified, 242 files readable, 5 matches
[1285] doi:10.1002/hbm.26684 [paper, data]
Mapping brain function in adults and young children during naturalistic viewing with high-density diffuse optical tomography.
Journal: Human brain mapping
Status: code on request, 1 dataset cited
[1286] doi:10.1111/cns.14684 [paper]
Unveiling convergent and divergent intrinsic brain network alternations in depressed adolescents engaged in non-suicidal self-injurious behaviors with and without suicide attempts.
Journal: CNS neuroscience & therapeutics
Status: code on request
[1287] doi:10.3389/fcell.2024.1341373 [paper, data]
Sex-biased gene expression during neural differentiation of human embryonic stem cells.
Journal: Frontiers in cell and developmental biology
Status: data only, 1 dataset cited
[1288] doi:10.1093/bib/bbae265 [paper]
Approaches to embryonic neurodevelopment: from neural cell to neural tube formation through mathematical models.
Journal: Briefings in bioinformatics
Status: code on request

Monday, 29 April 2024 (1 paper)

[1289] doi:10.1093/braincomms/fcae154 [paper, repository]
Resting-state functional connectivity in children cooled for neonatal encephalopathy.
Journal: Brain communications
Authors' code: apcspencer/dFC_DimReduction (no license)
Status: code verified, 12 files readable, 6 matches

Saturday, 27 April 2024 (2 papers)

[1290] doi:10.1038/s41467-024-47934-w [paper, repository]
Linear interaction between replication and transcription shapes DNA break dynamics at recurrent DNA break Clusters.
Journal: Nature communications
Authors' code: ClaireMarchal/High-Res_repli-seq_Features (no license), Zenodo 10832658 (CC-BY-4.0), brainbreaks/HTGTS (no license), Zenodo 10843397 (CC-BY-4.0), brainbreaks/dsb_paper (no license)
Status: code verified, 124 files readable, 7 matches
[1291] doi:10.1016/j.dcn.2024.101388 [paper, repository]
NowIKnowMyABCD: A global resource hub for researchers using data from the ABCD Study.
Journal: Developmental cognitive neuroscience
Authors' code: now-i-know-my-abcd/docs (no license), now-i-know-my-abcd (no license)
Status: code verified, 10 files readable, 2 matches

Friday, 26 April 2024 (1 paper)

[1292] doi:10.1162/imag_a_00145 [paper]
Dimensions of early life adversity and their associations with functional brain organisation.
Journal: Imaging neuroscience (Cambridge, Mass.)
Status: code on request

Thursday, 25 April 2024 (2 papers)

[1293] doi:10.1016/j.dcn.2024.101387 [paper, repository]
Infant attachment does not depend on neonatal amygdala and hippocampal structure and connectivity.
Journal: Developmental cognitive neuroscience
Authors' code: git.ecdf.ed.ac.uk/jbrl/amy-hip-attachment (no license)
Status: code found, still to be checked
[1294] doi:10.1016/j.media.2024.103186 [paper, repository]
Deep learning microstructure estimation of developing brains from diffusion MRI: A newborn and fetal study.
Journal: Medical image analysis
Authors' code: medical-Image-Analysis-Laboratory (no license)
Status: code verified

Wednesday, 24 April 2024 (1 paper)

[1295] doi:10.1038/s41398-024-02904-0 [paper]
Exercise mitigates a gut microbiota-mediated reduction in adult hippocampal neurogenesis and associated behaviours in rats.
Journal: Translational psychiatry
Status: code on request

Tuesday, 23 April 2024 (1 paper)

[1296] doi:10.1038/s41380-024-02562-0 [paper, data]
Endogenous mutant Huntingtin alters the corticogenesis via lowering Golgi recruiting ARF1 in cortical organoid.
Journal: Molecular psychiatry
Status: data only, 1 dataset cited

Monday, 22 April 2024 (3 papers)

[1297] doi:10.1371/journal.pcbi.1012054 [paper, repository]
Neutral competition explains the clonal composition of neural organoids.
Journal: PLoS computational biology
Authors' code: Cibiv/SANjar (no license)
Status: code verified, 30 files readable, 3 matches
[1298] doi:10.1038/s42003-024-06016-9 [paper, repository]
Salience network connectivity is altered in 6-week-old infants at heightened likelihood for developing autism.
Journal: Communications biology
Authors' code: Zenodo 8403701 (CC-BY-4.0)
Status: code verified, 3 files readable
[1299] doi:10.1016/j.dcn.2024.101386 [paper, repository]
Differences in educational opportunity predict white matter development.
Journal: Developmental cognitive neuroscience
Authors' code: earoy/white_matter_education (no license)
Status: code verified, 8 files readable, 7 matches

Tuesday, 16 April 2024 (4 papers)

[1300] doi:10.1002/mrm.30094 [paper, repository]
In vivo T2 measurements of the fetal brain using single-shot fast spin echo sequences.
Journal: Magnetic resonance in medicine
Authors' code: SVRTK/SVRTK (Apache-2.0), BioMedIA/MIRTK (Apache-2.0), mriphysics/EPG-X (MIT)
Status: code verified, 814 files readable, 7 matches
[1301] doi:10.1038/s41598-024-59111-6 [paper, data]
Exploring fetal brain tumor glioblastoma symptom verification with self organizing maps and vulnerability data analysis.
Journal: Scientific reports
Status: data only, 1 dataset cited
[1302] doi:10.1186/s12929-024-01028-3 [paper, repository]
Longitudinal alterations in brain perfusion and vascular reactivity in the zQ175DN mouse model of Huntington's disease.
Journal: Journal of biomedical science
Authors' code: DeVosLab/Huntington (CC-BY-NC-SA-4.0)
Status: empty repository, 2 files readable
[1303] doi:10.1016/j.isci.2024.109748 [paper, repository]
Wybutosine hypomodification of tRNAphe activates HERVK and impairs neuronal differentiation.
Journal: iScience
Authors' code: alexdobin/STAR (MIT)
Status: code verified, 331 files readable

Monday, 15 April 2024 (1 paper)

[1304] doi:10.3389/fpsyt.2024.1375492 [paper, data]
Zmiz1 is a novel regulator of brain development associated with autism and intellectual disability.
Journal: Frontiers in psychiatry
Status: data only, 3 datasets cited

Saturday, 13 April 2024 (1 paper)

[1305] doi:10.1038/s41598-024-58648-w [paper]
Adolescents rats engage the orbitofrontal-striatal pathway differently than adults during impulsive actions.
Journal: Scientific reports
Status: code on request

Friday, 12 April 2024 (2 papers)

[1306] doi:10.1016/j.heliyon.2024.e28876 [paper]
Translatome and transcriptome profiling of neonatal mice hippocampus exposed to sevoflurane anesthesia.
Journal: Heliyon
Status: data only
[1307] doi:10.1016/j.ynirp.2024.100201 [paper, repository]
Associations of behavioral problems with white matter circuits connecting to the frontal lobes in school-aged children born at term and preterm.
Journal: Neuroimage. Reports
Authors' code: vistalab (no license)
Status: code verified

Thursday, 11 April 2024 (2 papers)

[1308] doi:10.7554/elife.86812 [paper, repository]
Fetal influence on the human brain through the lifespan.
Journal: eLife
Status: code verified, 340 files readable, 6 matches
[1309] doi:10.1016/j.dcn.2024.101377 [paper, repository]
Examining neural responses to anticipating or receiving monetary rewards and the development of binge eating in youth. A registered report using data from the Adolescent Brain Cognitive Development (ABCD) study.
Journal: Developmental cognitive neuroscience
Authors' code: DCAN-Labs/abcd-hcp-pipelines (no license)
Status: dead link

Wednesday, 10 April 2024 (2 papers)

[1310] doi:10.1126/sciadv.adj0400 [paper, repository]
A digital twin of the infant microbiome to predict neurodevelopmental deficits.
Journal: Science advances
Authors' code: pypi.org/project/qbiome (no license), zeroknowledgediscovery/qbiome (MIT), Zenodo 7459014 (other-open)
Status: code verified, 69 files readable, 7 matches
[1311] doi:10.1038/s44319-024-00131-8 [paper, data]
Foxp1 suppresses cortical angiogenesis and attenuates HIF-1alpha signaling to promote neural progenitor cell maintenance.
Journal: EMBO reports
Status: data only, 1 dataset cited

Tuesday, 9 April 2024 (2 papers)

[1312] doi:10.1002/jez.b.23251 [paper, repository]
The domestication of the larynx: The neural crest connection.
Journal: Journal of experimental zoology. Part B, Molecular and developmental evolution
Authors' code: Zenodo 14967301 (MIT)
Status: code verified, 2 files readable
[1313] doi:10.1101/2024.04.08.588566 [paper, data]
Maturation-informed synthetic Magnetic Resonance Images of the Developing Human Fetal Brain
Journal: bioRxiv (preprint)
Status: data only, 2 datasets cited

Monday, 8 April 2024 (1 paper)

[1314] doi:10.1073/pnas.2317783121 [paper, data]
Developmental trajectories of GABAergic cortical interneurons are sequentially modulated by dynamic &lt;i&gt;FoxG1&lt;/i&gt; expression levels.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 3 datasets cited

Friday, 5 April 2024 (1 paper)

[1315] doi:10.1126/sciadv.adl4600 [paper, repository]
Adaptive functions of structural variants in human brain development.
Journal: Science advances
Status: code verified, 4 files readable, 1 match

Thursday, 4 April 2024 (3 papers)

[1316] doi:10.1159/000538060 [paper, data]
The Relationship between Neurobiological Function and Inflammation in Depressed Children and Adolescents: A Scoping Review.
Journal: Neuropsychobiology
Status: data only, 1 dataset cited
[1317] doi:10.3389/fpsyt.2024.1386984 [paper]
Weakened effective connectivity between salience network and default mode network during resting state in adolescent depression.
Journal: Frontiers in psychiatry
Status: code on request
[1318] doi:10.1016/j.isci.2024.109662 [paper, repository]
Regional homogeneity as a marker of sensory cortex dysmaturity in preterm infants.
Journal: iScience
Authors' code: Zenodo 10818502 (CC-BY-4.0), srd49/dbi (no license)
Status: code verified, 14 files readable, 2 matches

Wednesday, 3 April 2024 (1 paper)

[1319] doi:10.1016/j.dcn.2024.101373 [paper]
Aperiodic EEG and 7T MRSI evidence for maturation of E/I balance supporting the development of working memory through adolescence.
Journal: Developmental cognitive neuroscience
Status: code on request

Tuesday, 2 April 2024 (1 paper)

[1320] doi:10.1038/s41431-024-01600-3 [paper, data]
De novo variants in GABRA4 are associated with a neurological phenotype including developmental delay, behavioral abnormalities and epilepsy.
Journal: European journal of human genetics : EJHG
Status: data only, 2 datasets cited

Monday, 1 April 2024 (4 papers)

[1321] doi:10.1093/brain/awad380 [paper, data]
Bi-allelic ACBD6 variants lead to a neurodevelopmental syndrome with progressive and complex movement disorders.
Journal: Brain : a journal of neurology
Status: data only, 1 dataset cited
[1322] doi:10.1002/hbm.26584 [paper, repository]
Atypical co-development of the thalamus and cortex in autism: Evidence from age-related white-gray contrast change.
Journal: Human brain mapping
Status: code verified, 232 files readable, 2 matches
[1323] doi:10.1002/hbm.26674 [paper, repository]
Comprehensive analysis of synthetic learning applied to neonatal brain MRI segmentation.
Journal: Human brain mapping
Authors' code: romainvala/torchqc (no license)
Status: code verified, 103 files readable, 12 matches
[1324] doi:10.1162/netn_a_00355 [paper, repository]
Altered topological structure of the brain white matter in maltreated children through topological data analysis.
Journal: Network neuroscience (Cambridge, Mass.)
Authors' code: laplcebeltrami/maltreated (no license)
Status: code verified, 20 files readable, 9 matches

Friday, 29 March 2024 (2 papers)

[1325] doi:10.1038/s41467-024-47054-5 [paper, repository]
Transient expression of the neuropeptide galanin modulates peripheral‑to‑central connectivity in the somatosensory thalamus during whisker development in mice.
Journal: Nature communications
Authors' code: harkany-lab.github.io/hevesi_2023 (no license), figshare 22665352 (CC-BY-4.0)
Status: code verified, 30 files readable, 6 matches
[1326] doi:10.1038/s41380-024-02526-4 [paper]
Neural foundation of the diathesis-stress model: longitudinal gray matter volume changes in response to stressful life events in major depressive disorder and healthy controls.
Journal: Molecular psychiatry
Status: code on request

Thursday, 28 March 2024 (3 papers)

[1327] doi:10.1093/braincomms/fcae101 [paper, repository]
Morphological profiling in human neural progenitor cells classifies hits in a pilot drug screen for Alzheimer's disease.
Journal: Brain communications
Authors' code: CarragherLab/cptools2 (MIT)
Status: code verified, 26 files readable
[1328] doi:10.3389/fphar.2024.1340691 [paper, data]
Early life phenobarbital exposure dysregulates the hippocampal transcriptome.
Journal: Frontiers in pharmacology
Status: data only, 1 dataset cited
[1329] doi:10.1016/j.isci.2024.109585 [paper, data]
Craniofacial chondrogenesis in organoids from human stem cell-derived neural crest cells.
Journal: iScience
Status: data only, 2 datasets cited

Wednesday, 27 March 2024 (4 papers)

[1330] doi:10.1371/journal.pone.0300673 [paper, repository]
Effects of cleft lip on visual scanning and neural processing of infant faces.
Journal: PloS one
Authors' code: OSF 6zm9d (no license)
Status: code verified, 1 file readable
[1331] doi:10.1016/j.ebiom.2024.105061 [paper, repository]
A growth chart of brain function from infancy to adolescence based on EEG.
Journal: EBioMedicine
Authors' code: brain-modelling-group/functional-brain-age (no license)
Status: code verified, 30 files readable, 10 matches
[1332] doi:10.1038/s41598-024-56686-y [paper]
Electrical stimulation of chicken embryo development supports the Inside story scenario of human development and evolution.
Journal: Scientific reports
Status: code on request
[1333] doi:10.1016/j.heliyon.2024.e28825 [paper, repository]
The maternal-fetal neurodevelopmental groundings of preterm birth risk.
Journal: Heliyon
Status: code verified, 5 files readable, 1 match

Tuesday, 26 March 2024 (2 papers)

[1334] doi:10.1038/s41467-024-46784-w [paper, repository]
Using rare genetic mutations to revisit structural brain asymmetry.
Journal: Nature communications
Status: code verified, 75 files readable, 18 matches
[1335] doi:10.1186/s13293-024-00604-4 [paper, repository]
Menarche, pubertal timing and the brain: female-specific patterns of brain maturation beyond age-related development.
Journal: Biology of sex differences
Authors' code: NGottschewsky/menarche_classification (no license)
Status: code verified, 11 files readable, 8 matches

Monday, 25 March 2024 (4 papers)

[1336] doi:10.1007/s00439-024-02655-4 [paper, data]
Heterozygous loss-of-function variants in DOCK4 cause neurodevelopmental delay and microcephaly.
Journal: Human genetics
Status: data only, 1 dataset cited
[1337] doi:10.1038/s41593-024-01611-9 [paper, repository]
Spatial enhancer activation influences inhibitory neuron identity during mouse embryonic development.
Journal: Nature neuroscience
Authors' code: mayer-lab/Dvoretskova-et-al (MIT)
Status: code verified, 23 files readable, 25 matches
[1338] doi:10.1186/s12916-024-03340-z [paper]
Associations between maternal pre-pregnancy BMI and infant striatal mean diffusivity.
Journal: BMC medicine
Status: code on request
[1339] doi:10.1016/j.heliyon.2024.e28607 [paper, data]
The effects of CO<sub>2</sub> levels and body temperature on brain interstitial pH alterations during the induction of hypoxic-ischemic encephalopathy in newborn pigs.
Journal: Heliyon
Status: data only, 2 datasets cited

Saturday, 23 March 2024 (1 paper)

[1340] doi:10.3390/jpm14040336 [paper, repository]
Reference Values for the German Version of the Quality of Life after Brain Injury in Children and Adolescents (QOLIBRI-KID/ADO) from a General Population Sample.
Journal: Journal of personalized medicine
Authors' code: mzeldovich/Project-Reference-values (no license)
Status: code verified, 22 files readable

Friday, 22 March 2024 (3 papers)

[1341] doi:10.1126/sciadv.adn4649 [paper, repository]
Childhood cancer mutagenesis caused by transposase-derived PGBD5.
Journal: Science advances
Authors' code: nicolaroberts/hdp (GPL-3.0), UM-Myeloma-Genomics/mmsig (other)
Status: code verified, 67 files readable
[1342] doi:10.1016/j.xcrm.2024.101480 [paper, repository]
Neuroactive metabolites and bile acids are altered in extremely premature infants with brain injury.
Journal: Cell reports. Medicine
Authors' code: bihealth/NeatMS (MIT)
Status: code verified, 13 files readable, 1 match
[1343] doi:10.1038/s41536-024-00352-4 [paper]
Intrinsic and extrinsic actions of human neural progenitors with SUFU inhibition promote tissue repair and functional recovery from severe spinal cord injury.
Journal: NPJ Regenerative medicine
Status: code on request

Thursday, 21 March 2024 (1 paper)

[1344] doi:10.1186/s12864-024-10230-4 [paper, data]
Chromatin accessibility and H3K9me3 landscapes reveal long-term epigenetic effects of fetal-neonatal iron deficiency in rat hippocampus.
Journal: BMC genomics
Status: data only, 1 dataset cited

Wednesday, 20 March 2024 (1 paper)

[1345] doi:10.1016/j.dcn.2024.101368 [paper, repository]
Neighborhood disadvantage and parenting predict longitudinal clustering of uncinate fasciculus microstructural integrity and clinical symptomatology in adolescents.
Journal: Developmental cognitive neuroscience
Authors' code: OSF 2pz8v (no license)
Status: code verified, 1 file readable, 5 matches

Tuesday, 19 March 2024 (4 papers)

[1346] doi:10.1038/s42003-024-05923-1 [paper, repository]
Human cytomegalovirus (CMV) dysregulates neurodevelopmental pathways in cerebral organoids.
Journal: Communications biology
Authors' code: charlesfoster/CMV_Cerebral_Organoid_Paper (no license), s1corley/CMV (no license)
Status: code verified, 6 files readable, 6 matches
[1347] doi:10.1016/j.dcn.2024.101366 [paper, repository]
Neural correlates involved in perspective-taking in early childhood.
Journal: Developmental cognitive neuroscience
Status: code verified, 56 files readable, 8 matches
[1348] doi:10.1016/j.dcn.2024.101367 [paper, repository]
Early life stress and functional network topology in children.
Journal: Developmental cognitive neuroscience
Authors' code: VU-BRAINS-lab/ABCD_Stressor_Network (no license), nda.nih.gov/abcd (no license)
Status: code verified, 4 files readable
[1349] doi:10.1162/imag_a_00086 [paper, repository]
Longitudinal stability of cortical grey matter measures varies across brain regions, imaging metrics, and testing sites in the ABCD study.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: OSF rxmn2 (no license), OSF ukjvm (no license), sdparsons/Longitudinal_Stability_ABCD_Grey_Matter (no license)
Status: code verified, 12 files readable, 6 matches

Monday, 18 March 2024 (2 papers)

[1350] doi:10.26508/lsa.202302088 [paper, repository]
Aberrant DNA methylation distorts developmental trajectories in atypical teratoid/rhabdoid tumors.
Journal: Life science alliance
Authors' code: CRI-group/DNA_meth_ATRT (no license)
Status: code verified, 5 files readable, 6 matches
[1351] doi:10.1038/s41467-024-46398-2 [paper, repository]
Population-wide cerebellar growth models of children and adolescents.
Journal: Nature communications
Authors' code: amarquand/PCNtoolkit (GPL-3.0), Zenodo 10552295 (CC-BY-4.0)
Status: code verified, 126 files readable

Saturday, 16 March 2024 (1 paper)

[1352] doi:10.1016/j.dcn.2024.101365 [paper, repository]
Behavioral and neural responses to social rejection: Individual differences in developmental trajectories across childhood and adolescence.
Journal: Developmental cognitive neuroscience
Authors' code: jeroendmulder.github.io/social-emotion-regulation (no license), OSF hdrzc (no license)
Status: code verified

Friday, 15 March 2024 (4 papers)

[1353] doi:10.1002/advs.202308364 [paper, data]
Navigating Pubertal Goldilocks: The Optimal Pace for Hierarchical Brain Organization.
Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)
Status: data only, 1 dataset cited
[1354] doi:10.1038/s41398-024-02858-3 [paper, repository]
Rhesus infant nervous temperament predicts peri-adolescent central amygdala metabolism &amp; behavioral inhibition measured by a machine-learning approach.
Journal: Translational psychiatry
Authors' code: foxlab-/uc-freeze (no license)
Status: dead link
[1355] doi:10.1038/s41598-024-56800-0 [paper, data]
Diverse adolescents' transcendent thinking predicts young adult psychosocial outcomes via brain network development.
Journal: Scientific reports
Status: data only, 1 dataset cited
[1356] doi:10.1016/j.xpro.2024.102954 [paper]
Protocol for quantifying pyramidal neuron hyperexcitability in a mouse model of neurodevelopmental encephalopathy.
Journal: STAR protocols
Status: code on request

Thursday, 14 March 2024 (1 paper)

[1357] doi:10.1007/s10802-024-01190-0 [paper, repository]
Amygdala Volume is Associated with ADHD Risk and Severity Beyond Comorbidities in Adolescents: Clinical Testing of Brain Chart Reference Standards.
Journal: Research on child and adolescent psychopathology
Status: code verified, 11 files readable

Tuesday, 12 March 2024 (1 paper)

[1358] doi:10.1172/jci177771 [paper, repository]
BAP1 is required prenatally for differentiation and maintenance of postnatal murine enteric nervous system.
Journal: The Journal of clinical investigation
Status: code verified, 19 files readable, 6 matches

Monday, 11 March 2024 (2 papers)

[1359] doi:10.1172/jci165787 [paper, data]
A BMP-controlled metabolic/epigenetic signaling cascade directs midfacial morphogenesis.
Journal: The Journal of clinical investigation
Status: data only, 2 datasets cited
[1360] doi:10.3390/biom14030331 [paper, data]
Functional Implications of the Prosomeric Brain Model.
Journal: Biomolecules
Status: data only, 1 dataset cited

Friday, 8 March 2024 (1 paper)

[1361] doi:10.1016/j.isci.2024.109438 [paper, data]
Heterogeneous subpopulations of GABA<sub>A</sub>R-responding neurons coexist across neuronal network scales and developmental stages in health and disease.
Journal: iScience
Status: code on request, 1 dataset cited

Wednesday, 6 March 2024 (1 paper)

[1362] doi:10.1016/j.heliyon.2024.e27634 [paper]
Pcgf5: An important regulatory factor in early embryonic neural induction.
Journal: Heliyon
Status: code on request

Saturday, 2 March 2024 (2 papers)

[1363] doi:10.1007/s10548-024-01043-5 [paper, data]
Microstate Analysis of Continuous Infant EEG: Tutorial and Reliability.
Journal: Brain topography
Status: data only, 3 datasets cited
[1364] doi:10.1016/j.dcn.2024.101363 [paper, data]
Excitatory and inhibitory neurochemical markers of anxiety in young females.
Journal: Developmental cognitive neuroscience
Status: data only, 1 dataset cited

Friday, 1 March 2024 (3 papers)

[1365] doi:10.1093/cercor/bhae046 [paper, repository]
The developmental trajectory of 1H-MRS brain metabolites from childhood to adulthood.
Journal: Cerebral cortex (New York, N.Y. : 1991)
Authors' code: schorschinho/osprey (MIT)
Status: code verified, 487 files readable, 8 matches
[1366] doi:10.1002/hbm.26660 [paper, repository]
Feature similarity gradients detect alterations in the neonatal cortex associated with preterm birth.
Journal: Human brain mapping
Status: code verified, 8 files readable, 1 match
[1367] doi:10.1002/hbm.26601 [paper, repository]
Evaluation of behavioral variance/covariance explained by the neuroimaging data through a pattern-based regression.
Journal: Human brain mapping
Authors' code: dichen27/VDI_Regression (no license)
Status: code verified, 7 files readable

Wednesday, 28 February 2024 (1 paper)

[1368] doi:10.1038/s41586-024-07095-8 [paper, repository]
On the genetic basis of tail-loss evolution in humans and apes.
Journal: Nature
Authors' code: boxialaboratory/Tail-Loss-Primates (no license)
Status: code verified, 7 files readable, 5 matches

Tuesday, 27 February 2024 (1 paper)

[1369] doi:10.1038/s41597-024-03058-w [paper, repository]
Harmonized diffusion MRI data and white matter measures from the Adolescent Brain Cognitive Development Study.
Journal: Scientific data
Status: code verified, 347 files readable, 13 matches

Monday, 26 February 2024 (3 papers)

[1370] doi:10.1007/s00285-024-02047-2 [paper]
A biased random walk approach for modeling the collective chemotaxis of neural crest cells.
Journal: Journal of mathematical biology
Status: code on request
[1371] doi:10.1038/s41421-024-00656-1 [paper, repository]
Single-cell multi-omics analysis of lineage development and spatial organization in the human fetal cerebellum.
Journal: Cell discovery
Status: code verified, 20 files readable, 7 matches
[1372] doi:10.1002/jcv2.12228 [paper, repository]
Bifactor models of psychopathology using multi-informant and multi-instrument dimensional measures in the ABCD study.
Journal: JCPP advances
Authors' code: gracejacobs/ABCD_factor_analysis (no license)
Status: code verified, 11 files readable, 5 matches

Thursday, 22 February 2024 (2 papers)

[1373] doi:10.3758/s13414-024-02857-y [paper, repository]
Coregistration of EEG and eye-tracking in infants and developing populations.
Journal: Attention, perception & psychophysics
Authors' code: OSF 837wm (no license), OSF he2kr (no license)
Status: empty repository
[1374] doi:10.3758/s13415-024-01169-w [paper, data]
Neural and affective responses to prolonged eye contact with parents in depressed and nondepressed adolescents.
Journal: Cognitive, affective & behavioral neuroscience
Status: data only, 2 datasets cited

Wednesday, 21 February 2024 (1 paper)

[1375] doi:10.1016/j.ajhg.2024.02.001 [paper, data]
De novo variants in DENND5B cause a neurodevelopmental disorder.
Journal: American journal of human genetics
Status: code on request, 2 datasets cited

Tuesday, 20 February 2024 (1 paper)

[1376] doi:10.1002/ece3.10977 [paper, data]
Thermoregulatory response in juvenile <i>Hippocampus erectus</i>: Effect of magnitude and rate of thermal increase on metabolism and antioxidative defence.
Journal: Ecology and evolution
Status: data only, 1 dataset cited

Monday, 19 February 2024 (1 paper)

[1377] doi:10.1016/j.isci.2024.109268 [paper, repository]
Responses in the left and right entopallium are differently affected by light stimulation in embryo.
Journal: iScience
Authors' code: Zenodo 10651130 (CC-BY-4.0)
Status: code verified, 2 files readable

Friday, 16 February 2024 (3 papers)

[1378] doi:10.1186/s13287-024-03658-8 [paper, data]
The m&lt;sup&gt;6&lt;/sup&gt;A methylation and expression profiles of mouse neural stem cells after hypoxia/reoxygenation.
Journal: Stem cell research & therapy
Status: data only, 1 dataset cited
[1379] doi:10.1038/s41598-024-54302-7 [paper, data]
Characterization of enhancer activity in early human neurodevelopment using Massively Parallel Reporter Assay (MPRA) and forebrain organoids.
Journal: Scientific reports
Status: data only, 2 datasets cited
[1380] doi:10.1038/s44320-024-00022-z [paper, repository]
Dissecting the spatiotemporal diversity of adult neural stem cells.
Journal: Molecular systems biology
Authors' code: ncbi.nlm.nih.gov/geo/query (no license), nimitic/radial-glia (no license)
Status: code verified, 12 files readable, 8 matches

Wednesday, 14 February 2024 (1 paper)

[1381] doi:10.1016/j.dcn.2024.101358 [paper, repository]
Sex and pubertal variation in reward-related behavior and neural activation in early adolescents.
Journal: Developmental cognitive neuroscience
Status: code verified, 4 files readable, 1 match

Tuesday, 13 February 2024 (2 papers)

[1382] doi:10.1242/dev.201934 [paper, data]
Hindbrain boundaries as niches of neural progenitor and stem cells regulated by the extracellular matrix proteoglycan chondroitin sulphate.
Journal: Development (Cambridge, England)
Status: data only, 1 dataset cited
[1383] doi:10.1038/s41467-024-45409-6 [paper, data]
Intrauterine growth and the tangential expansion of the human cerebral cortex in times of food scarcity and abundance.
Journal: Nature communications
Status: data only, 2 datasets cited

Monday, 12 February 2024 (1 paper)

[1384] doi:10.1523/eneuro.0194-23.2023 [paper, repository]
Paternal Prenatal and Lactation Exposure to a High-Calorie Diet Shapes Transgenerational Brain Macro- and Microstructure Defects, Impacting Anxiety-Like Behavior in Male Offspring Rats.
Journal: eNeuro
Authors' code: Mouse-Imaging-Centre/pydpiper (BSD-3-Clause)
Status: code verified, 69 files readable, 2 matches

Saturday, 10 February 2024 (1 paper)

[1385] doi:10.1177/0271678x241232197 [paper, repository]
Quantification of brain-wide vascular resistivity via ultrafast Doppler in human neonates helps early detection of white matter injury.
Journal: Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism
Authors' code: timjerman/JermanEnhancementFilter (BSD-3-Clause)
Status: code verified, 11 files readable, 1 match

Thursday, 8 February 2024 (1 paper)

[1386] doi:10.1038/s41467-023-44050-z [paper, repository]
Neonatal brain dynamic functional connectivity in term and preterm infants and its association with early childhood neurodevelopment.
Journal: Nature communications
Authors' code: code-neuro.github.io/dynfc (no license), CoDe-Neuro/neonatal_dfc (MIT), Zenodo 6615603 (other-open), Zenodo 10050537 (MIT), code-neuro/dynfc (MIT)
Status: code verified, 62 files readable, 7 matches

Wednesday, 7 February 2024 (1 paper)

[1387] doi:10.1186/s12864-023-09898-x [paper, data]
Single-cell RNA sequencing of mid-to-late stage spider embryos: new insights into spider development.
Journal: BMC genomics
Status: data only, 7 datasets cited

Tuesday, 6 February 2024 (1 paper)

[1388] doi:10.1002/jcv2.12220 [paper, repository]
Parental education and income are linked to offspring cortical brain structure and psychopathology at 9-11 years.
Journal: JCPP advances
Authors' code: OSF etsjx (no license), data-archive.nimh.nih.gov/abcd (no license)
Status: code verified, 2 files readable, 3 matches

Monday, 5 February 2024 (2 papers)

[1389] doi:10.1038/s41598-024-52323-w [paper, repository]
Multimodal machine learning for modeling infant head circumference, mothers' milk composition, and their shared environment.
Journal: Scientific reports
Status: code verified
[1390] doi:10.1016/j.dcn.2024.101353 [paper, data]
Limitations of two time point data for understanding individual differences in longitudinal modeling - What can difference reveal about change?
Journal: Developmental cognitive neuroscience
Status: data only, 2 datasets cited

Saturday, 3 February 2024 (1 paper)

[1391] doi:10.3390/biomedicines12020357 [paper, data]
Beyond the Brain: Perinatal Exposure of Rats to Serotonin Enhancers Induces Long-Term Changes in the Jejunum and Liver.
Journal: Biomedicines
Status: data only, 1 dataset cited

Friday, 2 February 2024 (2 papers)

[1392] doi:10.1126/sciadv.adi1737 [paper, data]
Notch3 directs differentiation of brain mural cells from human pluripotent stem cell-derived neural crest.
Journal: Science advances
Status: data only, 2 datasets cited
[1393] doi:10.1162/imag_a_00076 [paper]
Gray matter correlates of attention-deficit hyperactivity disorder in boys versus girls with sensory processing dysfunction.
Journal: Imaging neuroscience (Cambridge, Mass.)
Status: code on request

Thursday, 1 February 2024 (3 papers)

[1394] doi:10.1093/scan/nsae008 [paper, repository]
Developmental changes in brain function linked with addiction-like social media use two years later.
Journal: Social cognitive and affective neuroscience
Authors' code: flanneryg3/asmu (no license), identifiers.org/neurovault.collection:14537 (no license)
Status: code verified
[1395] doi:10.1002/hbm.26610 [paper, repository]
Multiplex dynamic networks in the newborn brain disclose latent links with neurobehavioral phenotypes.
Journal: Human brain mapping
Authors' code: Al-Sad (no license)
Status: code verified
[1396] doi:10.1002/hbm.26574 [paper, repository]
Adolescent to young adult longitudinal development of subcortical volumes in two European sites with four waves.
Journal: Human brain mapping
Authors' code: OSF 5tfh4 (no license)
Status: code found, still to be checked

Wednesday, 31 January 2024 (1 paper)

[1397] doi:10.1038/s41586-023-06984-8 [paper, data]
An epigenetic barrier sets the timing of human neuronal maturation.
Journal: Nature
Status: data only, 1 dataset cited

Tuesday, 30 January 2024 (1 paper)

[1398] doi:10.1093/pnasnexus/pgae003 [paper, repository]
Prenatal substance exposure and child health: Understanding the role of environmental factors, genetics, and brain development.
Journal: PNAS nexus
Status: code verified, 7 files readable, 4 matches

Friday, 26 January 2024 (1 paper)

[1399] doi:10.1038/s41467-024-44863-6 [paper, repository]
Structural connectome architecture shapes the maturation of cortical morphology from childhood to adolescence.
Journal: Nature communications
Authors' code: NeuroAI-HD/HD-BET (Apache-2.0), Xinyuan-Liang/SC-shapes-the-maturation-of-cortical-morphology (GPL-2.0), rmarkello/abagen (BSD-3-Clause), Zenodo 10423891 (CC-BY-4.0)
Status: code verified, 86 files readable, 8 matches

Thursday, 25 January 2024 (1 paper)

[1400] doi:10.1038/s41467-024-44983-z [paper, repository]
A developmental increase of inhibition promotes the emergence of hippocampal ripples.
Journal: Nature communications
Authors' code: OpatzLab/HanganuOpatzToolbox (GPL-3.0), iinnpp/spwr_snn (GPL-3.0), Zenodo 10424461 (CC-BY-4.0)
Status: code verified, 626 files readable, 15 matches

Wednesday, 24 January 2024 (2 papers)

[1401] doi:10.1242/dev.202110 [paper, repository]
BRD4 binds to active cranial neural crest enhancers to regulate RUNX2 activity during osteoblast differentiation.
Journal: Development (Cambridge, England)
Authors' code: GordonLab/riesling-pipeline (MIT)
Status: code verified, 18 files readable, 2 matches
[1402] doi:10.1186/s12987-023-00502-8 [paper, repository]
Ch<sup>O</sup>P-CT: quantitative morphometrical analysis of the Hindbrain Choroid Plexus by X-ray micro-computed tomography.
Journal: Fluids and barriers of the CNS
Authors' code: CEITEC-CTLAB (no license)
Status: code verified

Tuesday, 23 January 2024 (2 papers)

[1403] doi:10.1038/s41598-024-52433-5 [paper]
Prenatal cocaine exposure and its influence on pediatric epigenetic clocks and epigenetic scores in humans.
Journal: Scientific reports
Status: code on request
[1404] doi:10.3390/metabo14020079 [paper, repository]
Optimized Mass Spectrometry Detection of Thyroid Hormones and Polar Metabolites in Rodent Cerebrospinal Fluid.
Journal: Metabolites
Status: code verified, 5 files readable, 2 matches

Saturday, 20 January 2024 (2 papers)

[1405] doi:10.1038/s41398-024-02764-8 [paper, data]
Abnormal developmental of structural covariance networks in young adults with heavy cannabis use: a 3-year follow-up study.
Journal: Translational psychiatry
Status: data only, 1 dataset cited
[1406] doi:10.1016/j.isci.2024.108981 [paper, repository]
Development of sensorimotor-visual connectome gradient at birth predicts neurocognitive outcomes at 2 years of age.
Journal: iScience
Authors' code: Zenodo 10431700 (CC-BY-4.0)
Status: code verified, 4 files readable, 2 matches

Thursday, 18 January 2024 (1 paper)

[1407] doi:10.3389/fradi.2023.1327075 [paper, repository]
High resolution and contrast 7 tesla MR brain imaging of the neonate.
Journal: Frontiers in radiology
Authors' code: BioMedIA/dhcp-structural-pipeline (Apache-2.0)
Status: code verified, 1,250 files readable, 1 match

Wednesday, 17 January 2024 (3 papers)

[1408] doi:10.1152/jn.00513.2022 [paper, data]
Motor patterns of patients with spinal muscular atrophy suggestive of sensory and corticospinal contributions to the development of locomotor muscle synergies.
Journal: Journal of neurophysiology
Status: data only, 1 dataset cited
[1409] doi:10.1038/s41593-023-01552-9 [paper, repository]
The developmental timing of spinal touch processing alterations predicts behavioral changes in genetic mouse models of autism spectrum disorders.
Journal: Nature neuroscience
Authors' code: RichieHakim/face-rhythm (MIT)
Status: code verified, 32 files readable, 2 matches
[1410] doi:10.1016/j.dcn.2024.101345 [paper, repository]
Multimodal neuroimaging correlates of physical-cognitive covariation in Chilean adolescents. The Cogni-Action Project.
Journal: Developmental cognitive neuroscience
Authors' code: andersonwinkler/PermCCA (GPL-3.0)
Status: code verified, 9 files readable

Tuesday, 16 January 2024 (1 paper)

[1411] doi:10.1038/s41380-023-02390-8 [paper, repository]
Age of onset of obsessive-compulsive disorder differentially affects white matter microstructure.
Journal: Molecular psychiatry
Authors' code: OSF m97kp (no license), chrisvriend/dwi-prep4tract (no license), chrisvriend/dwi-dtitk (GPL-3.0), chrisvriend/dwi-fba (no license)
Status: code verified, 41 files readable, 3 matches

Monday, 15 January 2024 (2 papers)

[1412] doi:10.1186/s13059-023-03147-w [paper, data]
ARMC5 controls the degradation of most Pol II subunits, and ARMC5 mutation increases neural tube defect risks in mice and humans.
Journal: Genome biology
Status: data only, 1 dataset cited
[1413] doi:10.1016/j.crmeth.2023.100689 [paper, repository]
Patterning ganglionic eminences in developing human brain organoids using a morphogen-gradient-inducing device.
Journal: Cell reports methods
Authors' code: Npavo002/MATLAB_SobelGradientAnalysis (MIT), Zenodo 10372539 (CC-BY-4.0)
Status: code verified, 4 files readable

Friday, 12 January 2024 (1 paper)

[1414] doi:10.1016/j.crmeth.2023.100686 [paper]
Modulation of neuronal activity in cortical organoids with bioelectronic delivery of ions and neurotransmitters.
Journal: Cell reports methods
Status: code on request

Thursday, 11 January 2024 (1 paper)

[1415] doi:10.1016/j.dcn.2024.101342 [paper, repository]
Friendship changes differentially predict neural correlates of decision-making for friends across adolescence.
Journal: Developmental cognitive neuroscience
Authors' code: sehjookwon/BFStability_3dlmer (no license)
Status: code verified, 1 file readable

Wednesday, 10 January 2024 (3 papers)

[1416] doi:10.1038/s41380-023-02343-1 [paper, data]
Mapping gray and white matter volume abnormalities in early-onset psychosis: an ENIGMA multicenter voxel-based morphometry study.
Journal: Molecular psychiatry
Status: data only, 1 dataset cited
[1417] doi:10.1073/pnas.2316542121 [paper, data]
BRCA1 and ELK-1 regulate neural progenitor cell fate in the optic tectum in response to visual experience in <i>Xenopus laevis</i> tadpoles.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited
[1418] doi:10.1101/2024.01.09.24301030 [paper, data]
Population clustering of structural brain aging and its association with brain development
Journal: medRxiv (preprint)
Status: data only, 1 dataset cited

Tuesday, 9 January 2024 (2 papers)

[1419] doi:10.7554/elife.91599 [paper, repository]
Balance of activity during a critical period tunes a developing network.
Journal: eLife
Authors' code: virhunter/vibrationduringdevelopment (no license)
Status: empty repository
[1420] doi:10.1073/pnas.2317668121 [paper, data]
Disruption of DNA methylation-mediated cranial neural crest proliferation and differentiation causes orofacial clefts in mice.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited

Monday, 8 January 2024 (1 paper)

[1421] doi:10.1038/s41467-023-44300-0 [paper, repository]
Developmental basis of SHH medulloblastoma heterogeneity.
Journal: Nature communications
Authors' code: fraenkel-lab/shh-mben (MIT)
Status: code verified, 20 files readable, 27 matches

Thursday, 4 January 2024 (3 papers)

[1422] doi:10.1101/2024.01.04.573933 [paper, data]
The neurodevelopmental trajectory of beta band oscillations: an OPM-MEG study
Journal: bioRxiv (preprint)
Status: data only, 2 datasets cited
[1423] doi:10.1016/j.isci.2024.108793 [paper, data]
Innate sensitivity to face-to-face biological motion.
Journal: iScience
Status: data only, 1 dataset cited
[1424] doi:10.1016/j.isci.2024.108787 [paper]
Perceptual reorganization from prior knowledge emerges late in childhood.
Journal: iScience
Status: code on request

Wednesday, 3 January 2024 (1 paper)

[1425] doi:10.1016/j.dcn.2023.101338 [paper, repository]
Building towards an adolescent neural urbanome: Expanding environmental measures using linked external data (LED) in the ABCD study.
Journal: Developmental cognitive neuroscience
Authors' code: OSF nmdtg (no license)
Status: code verified, 6 files readable, 9 matches

Tuesday, 2 January 2024 (4 papers)

[1426] doi:10.1172/jci171235 [paper, data]
Spliceosome malfunction causes neurodevelopmental disorders with overlapping features.
Journal: The Journal of clinical investigation
Status: data only, 1 dataset cited
[1427] doi:10.1242/dev.202095 [paper, data]
TFAP2 paralogs regulate midfacial development in part through a conserved ALX genetic pathway.
Journal: Development (Cambridge, England)
Status: data only, 1 dataset cited
[1428] doi:10.7554/elife.92523 [paper, data]
RNA fusion in human retinal development.
Journal: eLife
Status: data only, 1 dataset cited
[1429] doi:10.1038/s41467-023-44121-1 [paper, repository]
Histone lactylation couples cellular metabolism with developmental gene regulatory networks.
Journal: Nature communications
Authors' code: broadinstitute/picard (MIT)
Status: code verified, 757 files readable, 4 matches

Monday, 1 January 2024 (5 papers)

[1430] doi:10.1080/19490976.2023.2298697 [paper]
Microbiome function and neurodevelopment in Black infants: vitamin B&lt;sub&gt;12&lt;/sub&gt; emerges as a key factor.
Journal: Gut microbes
Status: data only
[1431] doi:10.1080/10253890.2024.2312467 [paper, data]
Chronic adolescent stress alters GR-FKBP5 interactions in the hippocampus of adult female rats.
Journal: Stress (Amsterdam, Netherlands)
Status: data only, 1 dataset cited
[1432] doi:10.1007/978-1-0716-3854-5_11 [paper, repository]
Lumen Pressure Modulation in Chicken Embryos.
Journal: Methods in molecular biology (Clifton, N.J.)
Authors' code: susie-m/lumen_pressure_reading (BSD-3-Clause)
Status: code verified, 3 files readable
[1433] doi:10.1093/noajnl/vdae144 [paper, data]
A human embryonic stem cell-based model reveals the cell of origin of FOXR2-activated CNS neuroblastoma.
Journal: Neuro-oncology advances
Status: data only, 1 dataset cited
[1434] doi:10.12688/wellcomeopenres.23249.2 [paper, repository]
Neuroblastoma cell lines display heterogeneity in differentiation responses.
Journal: Wellcome open research
Status: code verified, 6 files readable

Thursday, 28 December 2023 (1 paper)

[1435] doi:10.1016/j.dcn.2023.101337 [paper, repository]
A multi-sample evaluation of the measurement structure and function of the modified monetary incentive delay task in adolescents.
Journal: Developmental cognitive neuroscience
Authors' code: OSF a6t8k (no license), Zenodo 8387971 (other-open), Zenodo 10211538 (CC-BY-4.0), Zenodo 7117719 (Apache-2.0), demidenm/multisample_midmeasurestruct (MIT), demidenm/pyrelimri (MIT)
Status: code verified, 207 files readable, 17 matches

Tuesday, 26 December 2023 (1 paper)

[1436] doi:10.1016/j.patter.2023.100895 [paper, repository]
A critical period for developing face recognition.
Journal: Patterns (New York, N.Y.)
Authors' code: Zenodo 10014797 (other-open)
Status: code verified, 41 files readable, 5 matches

Saturday, 23 December 2023 (2 papers)

[1437] doi:10.1007/s10548-023-01030-2 [paper, repository]
Exploring the Association Between EEG Microstates During Resting-State and Error-Related Activity in Young Children.
Journal: Brain topography
Authors' code: gaffreylab (no license)
Status: code verified
[1438] doi:10.1016/j.dcn.2023.101334 [paper, repository]
Subcortical and cerebellar volume differences in bilingual and monolingual children: An ABCD study.
Journal: Developmental cognitive neuroscience
Authors' code: OSF up7v8 (no license)
Status: code verified, 5 files readable, 3 matches

Friday, 22 December 2023 (1 paper)

[1439] doi:10.1073/pnas.2305414120 [paper, data]
Unsupervised embedding of trajectories captures the latent structure of scientific migration.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited

Thursday, 21 December 2023 (2 papers)

[1440] doi:10.1038/s41598-023-49121-1 [paper, data]
Number agreement processing in adolescents with and without developmental language disorder (DLD): evidence from event-related brain potentials.
Journal: Scientific reports
Status: data only, 1 dataset cited
[1441] doi:10.1016/j.stemcr.2023.11.009 [paper, data]
Interspecies chimerism with human embryonic stem cells generates functional human dopamine neurons at low efficiency.
Journal: Stem cell reports
Status: data only, 1 dataset cited

Wednesday, 20 December 2023 (1 paper)

[1442] doi:10.1038/s41467-023-43973-x [paper, repository]
Mechanical control of neural plate folding by apical domain alteration.
Journal: Nature communications
Status: code verified, 11 files readable, 3 matches

Tuesday, 19 December 2023 (1 paper)

[1443] doi:10.1172/jci174138 [paper, data]
KCTD1/KCTD15 complexes control ectodermal and neural crest cell functions, and their impairment causes aplasia cutis.
Journal: The Journal of clinical investigation
Status: data only, 1 dataset cited

Monday, 18 December 2023 (3 papers)

[1444] doi:10.1080/19490976.2023.2292224 [paper, data]
Opioid-induced dysbiosis of maternal gut microbiota during gestation alters offspring gut microbiota and pain sensitivity.
Journal: Gut microbes
Status: data only, 1 dataset cited
[1445] doi:10.1038/s41522-023-00469-2 [paper, data]
Bacteroides is increased in an autism cohort and induces autism-relevant behavioral changes in mice in a sex-dependent manner.
Journal: NPJ biofilms and microbiomes
Status: data only, 1 dataset cited
[1446] doi:10.1162/imag_a_00050 [paper, data]
White matter tract microstructure, macrostructure, and associated cortical gray matter morphology across the lifespan.
Journal: Imaging neuroscience (Cambridge, Mass.)
Status: data only, 1 dataset cited

Thursday, 14 December 2023 (1 paper)

[1447] doi:10.7554/elife.69413 [paper]
Neural tube-associated boundary caps are a major source of mural cells in the skin.
Journal: eLife
Status: data only

Wednesday, 13 December 2023 (1 paper)

[1448] doi:10.1162/imag_a_00038 [paper, data]
Cross-cultural differences in visual object and background processing in the infant brain.
Journal: Imaging neuroscience (Cambridge, Mass.)
Status: code on request, 1 dataset cited

Tuesday, 12 December 2023 (1 paper)

[1449] doi:10.3389/fphar.2023.1294579 [paper, data]
Long-acting dolutegravir formulations prevent neurodevelopmental impairments in a mouse model.
Journal: Frontiers in pharmacology
Status: data only, 1 dataset cited

Monday, 11 December 2023 (2 papers)

[1450] doi:10.1038/s41467-023-43783-1 [paper, repository]
Puckered and JNK signaling in pioneer neurons coordinates the motor activity of the Drosophila embryo.
Journal: Nature communications
Authors' code: TimSaundersLab (no license)
Status: code verified
[1451] doi:10.1016/j.neuron.2023.11.013 [paper, repository]
Cortical somatostatin long-range projection neurons and interneurons exhibit divergent developmental trajectories.
Journal: Neuron
Authors' code: Zenodo 10069719 (CC-BY-4.0)
Status: code verified, 27 files readable, 11 matches

Saturday, 9 December 2023 (1 paper)

[1452] doi:10.1016/j.isci.2023.108706 [paper, data]
Sirt6 regulates the proliferation of neural precursor cells and cortical neurogenesis in mice.
Journal: iScience
Status: code on request, 2 datasets cited

Friday, 8 December 2023 (4 papers)

[1453] doi:10.1038/s41467-023-43996-4 [paper, repository]
Contractile ring mechanosensation and its anillin-dependent tuning during early embryogenesis.
Journal: Nature communications
Authors' code: sugi01/unilateralcytokinesis (BSD-3-Clause)
Status: code verified, 4 files readable, 2 matches
[1454] doi:10.1038/s41539-023-00201-x [paper, data]
Arithmetic skills are associated with left fronto-temporal gray matter volume in 536 children and adolescents.
Journal: NPJ science of learning
Status: data only, 5 datasets cited
[1455] doi:10.1007/s10964-023-01907-2 [paper, repository]
The Association Between Adverse Childhood Experiences (ACEs), Bullying Victimization, and Internalizing and Externalizing Problems Among Early Adolescents: Examining Cumulative and Interactive Associations.
Journal: Journal of youth and adolescence
Authors' code: OSF 862hu (no license)
Status: code verified, 1 file readable
[1456] doi:10.3389/fpsyt.2023.1280326 [paper, repository]
Selectively predicting the onset of ADHD, oppositional defiant disorder, and conduct disorder in early adolescence with high accuracy.
Journal: Frontiers in psychiatry
Authors' code: delacylab/integrated_evolutionary_learning (Apache-2.0)
Status: code verified, 26 files readable, 9 matches

Thursday, 7 December 2023 (2 papers)

[1457] doi:10.1038/s41467-023-43820-z [paper, data]
SEMA6A drives GnRH neuron-dependent puberty onset by tuning median eminence vascular permeability.
Journal: Nature communications
Status: data only, 5 datasets cited
[1458] doi:10.3389/fnins.2023.1287584 [paper, data]
Adolescent social housing protects against adult emotional and cognitive deficits and alters the PFC and NAc transcriptome in male and female C57BL/6J mice.
Journal: Frontiers in neuroscience
Status: data only, 1 dataset cited

Wednesday, 6 December 2023 (3 papers)

[1459] doi:10.1080/17470919.2023.2284999 [paper, repository]
Desensitized gamers? Violent video game exposure and empathy for pain in adolescents - an ERP study.
Journal: Social neuroscience
Authors' code: OSF eack9 (no license)
Status: code verified, 1 file readable
[1460] doi:10.3389/fnins.2023.1252850 [paper, repository]
Characterization of dynamic patterns of human fetal to neonatal brain asymmetry with deformation-based morphometry.
Journal: Frontiers in neuroscience
Authors' code: CST333/fet2neo_asymmetry (no license)
Status: code verified, 10 files readable, 1 match
[1461] doi:10.1002/jcv2.12210 [paper, data]
Interplay of early negative life events, development of orbitofrontal cortical thickness and depression in young adulthood.
Journal: JCPP advances
Status: data only, 2 datasets cited

Monday, 4 December 2023 (3 papers)

[1462] doi:10.1038/s41467-023-43728-8 [paper, data]
JUN upregulation drives aberrant transposable element mobilization, associated innate immune response, and impaired neurogenesis in Alzheimer's disease.
Journal: Nature communications
Status: data only, 1 dataset cited
[1463] doi:10.1038/s41559-023-02253-z [paper, repository]
The evolution of human altriciality and brain development in comparative context.
Journal: Nature ecology & evolution
Authors' code: figshare 22242724 (CC-BY-4.0), JeroenSmaers/evomap (MIT)
Status: code verified, 23 files readable, 15 matches
[1464] doi:10.1159/000534772 [paper, data]
Report of a Novel Homozygous Intragenic <i>DCC</i> Duplication and a Review of Literature of Developmental Split-Brain Syndrome aka Horizontal Gaze Palsy with Progressive Scoliosis-2 with Impaired Intellectual Development Syndrome.
Journal: Molecular syndromology
Status: data only, 1 dataset cited

Friday, 1 December 2023 (5 papers)

[1465] doi:10.1080/07853890.2023.2191003 [paper, data]
Early-life iron deficiency persistently disrupts affective behaviour in mice.
Journal: Annals of medicine
Status: data only, 1 dataset cited
[1466] doi:10.1080/15592294.2023.2207253 [paper, data]
DNA methylation at birth and fine motor ability in childhood: an epigenome-wide association study with replication.
Journal: Epigenetics
Status: data only, 1 dataset cited
[1467] doi:10.1093/brain/awad257 [paper, repository]
Biallelic MED27 variants lead to variable ponto-cerebello-lental degeneration with movement disorders.
Journal: Brain : a journal of neurology
Authors' code: matteoferla/MED27_analysis (MIT)
Status: code verified, 5 files readable
[1468] doi:10.1080/15592294.2023.2283657 [paper, data]
WGBS of embryonic gonads revealed that long non-coding RNAs in the MHM region might be involved in cell autonomous sex identity and female gonadal development in chickens.
Journal: Epigenetics
Status: data only, 1 dataset cited
[1469] doi:10.1126/sciadv.adj3793 [paper, repository]
Early life adversity shapes social subordination and cell type-specific transcriptomic patterning in the ventral hippocampus.
Journal: Science advances
Authors' code: theislab/ELS_analysis (MIT)
Status: code verified, 6 files readable, 3 matches

Thursday, 30 November 2023 (2 papers)

[1470] doi:10.1002/advs.202304421 [paper, repository]
Spatially Self-Organized Three-Dimensional Neural Concentroid as a Novel Reductionist Humanized Model to Study Neurovascular Development.
Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)
Authors' code: quadbiolab.github.io/voxhunt (no license), resources.aertslab.org/cistarget (no license)
Status: code verified
[1471] doi:10.1162/imag_a_00037 [paper, repository]
BrainAGE as a measure of maturation during early adolescence.
Journal: Imaging neuroscience (Cambridge, Mass.)
Status: code verified, 16 files readable, 5 matches

Wednesday, 29 November 2023 (2 papers)

[1472] doi:10.1126/sciadv.adh2726 [paper, repository]
<i>GTF2I</i> dosage regulates neuronal differentiation and social behavior in 7q11.23 neurodevelopmental disorders.
Journal: Science advances
Authors' code: cran.r-project.org/package=venndiagram (no license), Novartis/cellxgene-gateway (Apache-2.0)
Status: code verified, 45 files readable
[1473] doi:10.1038/s41390-023-02903-9 [paper, repository]
Early, low-dose hydrocortisone and near-term brain connectivity in extremely preterm infants.
Journal: Pediatric research
Authors' code: vistalab/RTP-pipeline (no license), yeatmanlab/AFQ (gnu)
Status: code verified, 213 files readable, 3 matches

Tuesday, 28 November 2023 (2 papers)

[1474] doi:10.1038/s41467-023-43567-7 [paper, repository]
The genetic relationships between brain structure and schizophrenia.
Journal: Nature communications
Authors' code: thewonlab/H-MAGMA (no license), evastauffer/schizophrenia-and-brain-structure (no license)
Status: code verified, 24 files readable, 12 matches
[1475] doi:10.18632/aging.205275 [paper, data]
Effects of paternal and chronological age on <i>BEGAIN</i> methylation and its possible role in autism.
Journal: Aging
Status: data only, 1 dataset cited

Monday, 27 November 2023 (1 paper)

[1476] doi:10.1080/19490976.2023.2283911 [paper, repository]
Nuanced contribution of gut microbiome in the early brain development of mice.
Journal: Gut microbes
Status: code verified, 3 files readable

Sunday, 26 November 2023 (1 paper)

[1477] doi:10.3390/brainsci13121639 [paper, data]
Development of Gamma Oscillation during Sentence Processing in Early Adolescence: Insights into the Maturation of Semantic Processing.
Journal: Brain sciences
Status: data only, 1 dataset cited

Friday, 24 November 2023 (1 paper)

[1478] doi:10.1126/sciadv.adf2772 [paper, data]
Neurodevelopmental defects in human cortical organoids with <i>N</i>-acetylneuraminic acid synthase mutation.
Journal: Science advances
Status: data only, 1 dataset cited

Thursday, 23 November 2023 (1 paper)

[1479] doi:10.1038/s41593-023-01501-6 [paper, repository]
A global multicohort study to map subcortical brain development and cognition in infancy and early childhood.
Journal: Nature neuroscience
Status: empty repository, 1 file readable

Wednesday, 22 November 2023 (2 papers)

[1480] doi:10.1128/spectrum.02580-23 [paper, repository]
Mouse intestinal microbiome modulation by oral administration of a GABA-producing &lt;i&gt;Bifidobacterium adolescentis&lt;/i&gt; strain.
Journal: Microbiology spectrum
Authors' code: ncbi.nlm.nih.gov/bioproject/956357 (no license), ncbi.nlm.nih.gov/biosample (no license)
Status: code verified
[1481] doi:10.1016/j.heliyon.2023.e22657 [paper, repository]
Exploring the core network of the structural covariance network in childhood absence epilepsy.
Journal: Heliyon
Authors' code: GSDrenthen/SCN (no license)
Status: code verified, 4 files readable

Tuesday, 21 November 2023 (3 papers)

[1482] doi:10.15252/embr.202357269 [paper, data]
The 5:2 diet does not increase adult hippocampal neurogenesis or enhance spatial memory in mice.
Journal: EMBO reports
Status: data only, 1 dataset cited
[1483] doi:10.7554/elife.91406 [paper, repository]
Truncated radial glia as a common precursor in the late corticogenesis of gyrencephalic mammals.
Journal: eLife
Status: code verified, 5 files readable, 7 matches
[1484] doi:10.1080/20008066.2023.2281971 [paper, repository]
The stress-buffering role of friendships in young people with childhood threat experiences: a preliminary report.
Journal: European journal of psychotraumatology
Authors' code: OSF mdfhw (no license)
Status: code verified, 6 files readable, 10 matches

Monday, 20 November 2023 (3 papers)

[1485] doi:10.1016/j.nbd.2023.106359 [paper, data]
Sex-specific developmental alterations in DYRK1A expression in the brain of a Down syndrome mouse model.
Journal: Neurobiology of disease
Status: data only, 1 dataset cited
[1486] doi:10.1016/j.clinph.2023.11.007 [paper, repository]
Sensory event-related potential morphology predicts age in premature infants.
Journal: Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology
Status: code verified, 6 files readable, 2 matches
[1487] doi:10.1016/j.isci.2023.108497 [paper, data]
FEZ1 participates in human embryonic brain development by modulating neuronal progenitor subpopulation specification and migrations.
Journal: iScience
Status: code on request, 1 dataset cited

Friday, 17 November 2023 (1 paper)

[1488] doi:10.1016/j.dcn.2023.101326 [paper, repository]
Developmental coupling of brain iron and intrinsic activity in infants during the first 150 days.
Journal: Developmental cognitive neuroscience
Authors' code: ndar.nih.gov (no license)
Status: code found, still to be checked

Thursday, 16 November 2023 (1 paper)

[1489] doi:10.1242/dev.202068 [paper, repository]
Accurate staging of chick embryonic tissues via deep learning of salient features.
Journal: Development (Cambridge, England)
Status: code verified, 174 files readable, 3 matches

Wednesday, 15 November 2023 (3 papers)

[1490] doi:10.1098/rspb.2023.1945 [paper, repository]
Early life adversity jointly regulates body-mass index and working memory development.
Journal: Proceedings. Biological sciences
Authors' code: OSF ezscm (no license), doi:10.6084/m9.figshare.c.6902614 (no license)
Status: code verified, 11 files readable, 8 matches
[1491] doi:10.1038/s41586-023-06720-2 [paper, repository]
Embryo-scale reverse genetics at single-cell resolution.
Journal: Nature
Authors' code: bbi-lab/bbi-dmux (other), bbi-lab/bbi-sci (other), cole-trapnell-lab/sdg-zfish (MIT)
Status: code verified, 68 files readable, 16 matches
[1492] doi:10.1186/s12864-023-09778-4 [paper, repository]
Changes in ADAR RNA editing patterns in CMV and ZIKV congenital infections.
Journal: BMC genomics
Status: code verified, 2 files readable

Tuesday, 14 November 2023 (1 paper)

[1493] doi:10.1007/s00330-023-10414-8 [paper, repository]
Brain age predicted using graph convolutional neural network explains neurodevelopmental trajectory in preterm neonates.
Journal: European radiology
Authors' code: bigting84/Brain-Age-Prediction (no license)
Status: code verified, 6 files readable, 1 match

Saturday, 11 November 2023 (2 papers)

[1494] doi:10.1038/s41467-023-43165-7 [paper, repository]
Virtual lesions in MEG reveal increasing vulnerability of the language network from early childhood through adolescence.
Journal: Nature communications
Authors' code: willi3by/MEG_FDA (no license)
Status: code verified, 5 files readable, 5 matches
[1495] doi:10.1016/j.dcn.2023.101324 [paper, repository]
From mother to child: How intergenerational transfer is reflected in similarity of corticolimbic brain structure and mental health.
Journal: Developmental cognitive neuroscience
Authors' code: mathworks.com/products/matlab.html (no license)
Status: code found, still to be checked

Friday, 10 November 2023 (4 papers)

[1496] doi:10.7554/elife.87772 [paper, repository]
scMultiome analysis identifies embryonic hindbrain progenitors with mixed rhombomere identities.
Journal: eLife
Authors' code: zfin.org (no license), rebeccaorourke-cu/sagerstrom_zebrafish_hindbrain (no license)
Status: code verified, 41 files readable, 5 matches
[1497] doi:10.1371/journal.pgen.1011030 [paper, data]
RET enhancer haplotype-dependent remodeling of the human fetal gut development program.
Journal: PLoS genetics
Status: data only, 1 dataset cited
[1498] doi:10.1073/pnas.2220300120 [paper, data]
Restoring neuronal iron homeostasis revitalizes neurogenesis after spinal cord injury.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited
[1499] doi:10.1016/j.dcn.2023.101323 [paper, repository]
Differential functional reorganization of ventral and dorsal visual pathways following childhood hemispherectomy.
Journal: Developmental cognitive neuroscience
Authors' code: vayzenb/ventral-dorsal-reorganization (no license)
Status: code verified, 24 files readable, 1 match

Thursday, 9 November 2023 (2 papers)

[1500] doi:10.1371/journal.pbio.3002352 [paper, repository]
Differential adhesion during development establishes individual neural stem cell niches and shapes adult behaviour in Drosophila.
Journal: PLoS biology
Authors' code: Zenodo 8426002 (CC-BY-4.0)
Status: code verified, 1 file readable
[1501] doi:10.1016/j.nicl.2023.103539 [paper, repository]
Testing the triple network model of psychopathology in a transdiagnostic neurodevelopmental cohort.
Journal: NeuroImage. Clinical
Authors' code: OSF 7mptz (no license)
Status: code verified, 5 files readable, 4 matches

Tuesday, 7 November 2023 (1 paper)

[1502] doi:10.1523/eneuro.0297-23.2023 [paper, repository]
Plasticity in Preganglionic and Postganglionic Neurons of the Sympathetic Nervous System during Embryonic Development.
Journal: eNeuro
Authors' code: April-Neuro/SPN-PGN-Analysis (no license)
Status: code verified, 5 files readable

Monday, 6 November 2023 (2 papers)

[1503] doi:10.1073/pnas.2302089120 [paper, repository]
Controlling donor and newborn neuron migration and maturation in the eye through microenvironment engineering.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: mcrewcow/BaranovLab (AGPL-3.0)
Status: code verified, 10 files readable, 1 match
[1504] doi:10.3389/fnins.2023.1289013 [paper, repository]
Spectral-based thickness profiling of the corpus callosum enhances anomaly detection in fetal alcohol spectrum disorders.
Journal: Frontiers in neuroscience
Status: code verified, 12 files readable, 2 matches

Saturday, 4 November 2023 (1 paper)

[1505] doi:10.1016/j.isci.2023.108398 [paper, repository]
Information integration during bioelectric regulation of morphogenesis of the embryonic frog brain.
Journal: iScience
Authors' code: smanicka/neuralPlatePatterning (no license)
Status: code verified, 38 files readable, 2 matches

Thursday, 2 November 2023 (2 papers)

[1506] doi:10.1080/19585969.2023.2252437 [paper, data]
Neural correlates of negative life events and their relationships with alcohol and cannabis use initiation.
Journal: Dialogues in clinical neuroscience
Status: data only, 1 dataset cited
[1507] doi:10.1016/j.isci.2023.108379 [paper]
Neocortical neuronal production and maturation defects in the TcMAC21 mouse model of Down syndrome.
Journal: iScience
Status: code on request

Wednesday, 1 November 2023 (3 papers)

[1508] doi:10.1093/nar/gkad798 [paper, repository]
Lineage specific 3D genome structure in the adult human brain and neurodevelopmental changes in the chromatin interactome.
Journal: Nucleic acids research
Authors' code: Zenodo 8190413 (CC-BY-4.0)
Status: code verified, 6 files readable, 4 matches
[1509] doi:10.1126/sciadv.adh9543 [paper, repository]
LINE-1 retrotransposons drive human neuronal transcriptome complexity and functional diversification.
Journal: Science advances
Authors' code: Zenodo 7589548 (other-open), raquelgarza.github.io/truster (no license), raquelgarza/truster (no license), raquelgarza/L1_transcriptional_complexity_Garza2023 (no license), Zenodo 8116135 (other-open)
Status: code verified, 78 files readable, 30 matches
[1510] doi:10.2147/phmt.s427773 [paper, data]
Detection and Severity Identification of Neonatal Seizure Using Deep Convolutional Neural Networks from Multichannel EEG Signal.
Journal: Pediatric health, medicine and therapeutics
Status: data only, 1 dataset cited

Tuesday, 31 October 2023 (2 papers)

[1511] doi:10.1016/j.isci.2023.108364 [paper, data]
Prdm12 represses the expression of the visceral neuron determinants Phox2a/b in developing somatosensory ganglia.
Journal: iScience
Status: code on request, 1 dataset cited
[1512] doi:10.21037/qims-23-708 [paper, repository]
Estimate of fetal brain temperature using proton resonance frequency thermometry during 3 Tesla fetal magnetic resonance imaging.
Journal: Quantitative imaging in medicine and surgery
Authors' code: jacob-ellison/fetal_prf_thermometry (no license)
Status: code verified, 21 files readable, 1 match

Monday, 30 October 2023 (1 paper)

[1513] doi:10.1016/j.dcn.2023.101320 [paper, data]
Hooked on a thought: Associations between rumination and neural responses to social rejection in adolescent girls.
Journal: Developmental cognitive neuroscience
Status: data only, 1 dataset cited

Friday, 27 October 2023 (1 paper)

[1514] doi:10.3389/fonc.2023.1285775 [paper]
A systematic review of data sources for artificial intelligence applications in pediatric brain tumors in Europe: implications for bias and generalizability.
Journal: Frontiers in oncology
Status: data only

Thursday, 26 October 2023 (1 paper)

[1515] doi:10.1242/dev.201519 [paper, data]
The shift to 3D growth during embryogenesis of kelp species, atlas of cell division and differentiation of Saccharina latissima.
Journal: Development (Cambridge, England)
Status: data only, 1 dataset cited

Wednesday, 25 October 2023 (2 papers)

[1516] doi:10.1038/s41586-023-06630-3 [paper, repository]
Normative spatiotemporal fetal brain maturation with satisfactory development at 2 years.
Journal: Nature
Authors' code: felipemoser/kelluwen (CC-BY-NC-SA-4.0), lindehesse/FetalSubcortSegm_Code (no license)
Status: code verified, 22 files readable
[1517] doi:10.1098/rsos.230755 [paper, repository]
Adult neurogenesis does not explain the extensive post-eclosion growth of <i>Heliconius</i> mushroom bodies.
Journal: Royal Society open science
Authors' code: Zenodo 7821485 (other-open), doi:10.6084/m9.figshare.c.6878007 (no license), mianalysis/mia (GPL-3.0)
Status: code verified, 966 files readable, 1 match

Tuesday, 24 October 2023 (1 paper)

[1518] doi:10.3389/fnbeh.2023.1213894 [paper, data]
Effects of parental mental health and family environment on impulsivity in preadolescents: a longitudinal ABCD study&lt;sup&gt;®&lt;/sup&gt;.
Journal: Frontiers in behavioral neuroscience
Status: data only, 1 dataset cited

Monday, 23 October 2023 (3 papers)

[1519] doi:10.1038/s41467-023-41839-w [paper, repository]
Domain adapted brain network fusion captures variance related to pubertal brain development and mental health.
Journal: Nature communications
Authors' code: dominikkraft/DomAdapt_BrainNetFusion (BSD-3-Clause), Zenodo 8223987 (other-open)
Status: code verified, 22 files readable, 11 matches
[1520] doi:10.1038/s41598-023-44676-5 [paper]
Superior performance of biofilm versus planktonic Limosilactobacillus reuteri in protection of the intestines and brain in a piglet model of necrotizing enterocolitis.
Journal: Scientific reports
Status: data only
[1521] doi:10.1016/j.isci.2023.108306 [paper]
Preclinical long-term safety of intraspinal transplantation of human dorsal spinal GABA neural progenitor cells.
Journal: iScience
Status: code on request

Friday, 20 October 2023 (3 papers)

[1522] doi:10.1126/sciadv.adh8313 [paper, data]
Tunable hydrogel viscoelasticity modulates human neural maturation.
Journal: Science advances
Status: data only, 1 dataset cited
[1523] doi:10.1038/s41467-023-42371-7 [paper, repository]
Imaging and multi-omics datasets converge to define different neural progenitor origins for ATRT-SHH subgroups.
Journal: Nature communications
Authors' code: bioinfo-pf-curie/RNA-seq (CECILL-2.1), bourdeautlab/LobonIglesias2023 (no license)
Status: code verified, 50 files readable, 22 matches
[1524] doi:10.1016/j.crneur.2023.100113 [paper, repository]
Apnea of prematurity induces short and long-term development-related transcriptional changes in the murine cerebellum.
Journal: Current research in neurobiology
Authors' code: ma-riviere/DE-AoP-23 (CC-BY-4.0), Zenodo 8139284 (CC-BY-4.0)
Status: code verified, 32 files readable, 1 match

Thursday, 19 October 2023 (1 paper)

[1525] doi:10.1242/bio.060151 [paper]
Spatial transcriptomics map of the embryonic mouse brain - a tool to explore neurogenesis.
Journal: Biology open
Status: data only

Tuesday, 17 October 2023 (2 papers)

[1526] doi:10.1073/pnas.2306475120 [paper, repository]
Sexual differentiation of neural mechanisms of stress sensitivity during puberty.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: bctrainorlab/behavioral_quantification (no license)
Status: dead link
[1527] doi:10.1186/s12888-023-05223-8 [paper, repository]
Mindfulness-based real-time fMRI neurofeedback: a randomized controlled trial to optimize dosing for depressed adolescents.
Journal: BMC psychiatry
Authors' code: pab2163/mindful_brain_project (no license), gablab/murfi2 (Apache-2.0)
Status: code verified, 425 files readable, 17 matches

Monday, 16 October 2023 (2 papers)

[1528] doi:10.15252/embj.2022113213 [paper, data]
Morphogenesis and development of human telencephalic organoids in the absence and presence of exogenous extracellular matrix.
Journal: The EMBO journal
Status: code on request, 1 dataset cited
[1529] doi:10.1177/13674935231205041 [paper, repository]
Establishing priorities in child health: Giving parents and youth a voice.
Journal: Journal of child health care : for professionals working with children in the hospital and community
Authors' code: OSF ajkmp (no license)
Status: empty repository

Saturday, 14 October 2023 (3 papers)

[1530] doi:10.1038/s41467-023-42322-2 [paper, data]
KDM2B regulates hippocampal morphogenesis by transcriptionally silencing Wnt signaling in neural progenitors.
Journal: Nature communications
Status: data only, 1 dataset cited
[1531] doi:10.1117/1.nph.10.4.045003 [paper]
Cerebrovascular reactivity to carbon dioxide tension in newborns: data from combined time-resolved near-infrared spectroscopy and diffuse correlation spectroscopy.
Journal: Neurophotonics
Status: code on request
[1532] doi:10.1016/j.dcn.2023.101314 [paper, repository]
Structural and functional connectome relationships in early childhood.
Journal: Developmental cognitive neuroscience
Authors' code: yoonmihong/SCFC (no license)
Status: code verified, 6 files readable, 4 matches

Thursday, 12 October 2023 (2 papers)

[1533] doi:10.1038/s41598-023-43193-9 [paper, data]
Consistent effects of the genetics of happiness across the lifespan and ancestries in multiple cohorts.
Journal: Scientific reports
Status: data only, 1 dataset cited
[1534] doi:10.3389/fimmu.2023.1268909 [paper, data]
Vancomycin-induced gut microbial dysbiosis alters enteric neuron-macrophage interactions during a critical period of postnatal development.
Journal: Frontiers in immunology
Status: data only, 1 dataset cited

Wednesday, 11 October 2023 (2 papers)

[1535] doi:10.7554/elife.84122 [paper, repository]
Using multi-modal neuroimaging to characterise social brain specialisation in infants.
Journal: eLife
Authors' code: maheensiddiqui91/NIRS-EEG (MIT)
Status: code verified, 4 files readable, 1 match
[1536] doi:10.1038/s41598-023-44093-8 [paper]
Immunoglobulin superfamily member 3 is required for the vagal neural crest cell migration and enteric neuronal network organization.
Journal: Scientific reports
Status: data only

Tuesday, 10 October 2023 (3 papers)

[1537] doi:10.1242/bio.060113 [paper, repository]
Deficiency of the Heterogeneous Nuclear Ribonucleoprotein U locus leads to delayed hindbrain neurogenesis.
Journal: Biology open
Status: code verified, 10 files readable, 4 matches
[1538] doi:10.1073/pnas.2307508120 [paper, repository]
The adaptive stochasticity hypothesis: Modeling equifinality, multifinality, and adaptation to adversity.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: DanAkarca/AdaptiveStochasticity (no license)
Status: code verified, 19 files readable, 9 matches
[1539] doi:10.1038/s41398-023-02599-9 [paper, repository]
Predicting individual cases of major adolescent psychiatric conditions with artificial intelligence.
Journal: Translational psychiatry
Authors' code: delacylab/integrated_evolutionary_learning (Apache-2.0)
Status: code verified, 26 files readable, 9 matches

Sunday, 8 October 2023 (1 paper)

[1540] doi:10.1016/j.jadohealth.2023.08.033 [paper]
Risk Assessment of Maladaptive Behaviors in Adolescents: Nutrition, Screen Time, Prenatal Exposure, Childhood Adversities - Adolescent Brain Cognitive Development Study.
Journal: The Journal of adolescent health : official publication of the Society for Adolescent Medicine
Status: code on request

Saturday, 7 October 2023 (1 paper)

[1541] doi:10.1186/s13229-023-00570-5 [paper, repository]
EEG functional connectivity in infants at elevated familial likelihood for autism spectrum disorder.
Journal: Molecular autism
Status: code verified, 13 files readable, 8 matches

Thursday, 5 October 2023 (1 paper)

[1542] doi:10.1371/journal.pntd.0011657 [paper]
Zika virus diversity in mice is maintained during early vertical transmission from placenta to fetus, but reduced in fetal bodies and brains at late stages of infection.
Journal: PLoS neglected tropical diseases
Status: data only

Wednesday, 4 October 2023 (2 papers)

[1543] doi:10.1186/s12915-023-01709-9 [paper, repository]
Impacts of maternal microbiota and microbial metabolites on fetal intestine, brain, and placenta.
Journal: BMC biology
Authors' code: Zenodo 7267763 (CC-BY-4.0)
Status: code verified, 1 file readable, 3 matches
[1544] doi:10.1016/j.dcn.2023.101310 [paper, repository]
Neural evidence for procedural automatization during cognitive development: Intraparietal response to changes in very-small addition problem-size increases with age.
Journal: Developmental cognitive neuroscience
Authors' code: BBL-lab/BBL-batch-system (no license)
Status: code verified, 131 files readable, 8 matches

Monday, 2 October 2023 (1 paper)

[1545] doi:10.1177/09727531231194399 [paper, data]
Multiomics Approach Reveal Novel Insights in FUS Driven Juvenile Amyotrophic Lateral Sclerosis: A Family Quartet Analysis.
Journal: Annals of neurosciences
Status: data only, 1 dataset cited

Sunday, 1 October 2023 (3 papers)

[1546] doi:10.1093/scan/nsad047 [paper, repository]
Similarity in functional connectome architecture predicts teenage grit.
Journal: Social cognitive and affective neuroscience
Authors' code: Zenodo 7986646 (other-open), humaffectneurolab/stabsim_grit (no license)
Status: code verified, 6 files readable, 3 matches
[1547] doi:10.1016/j.stem.2023.09.003 [paper, repository]
Tissue morphology influences the temporal program of human brain organoid development.
Journal: Cell stem cell
Authors' code: rosshandler/Structure-Indentity (no license), jboulanger/Organoid_morphology (no license), Zenodo 8322334 (other-open)
Status: code verified, 40 files readable, 21 matches
[1548] doi:10.5607/en23021 [paper, data]
Methylation-based Subclassifications of Embryonal Tumor with Multilayered Rosettes in Not Just Pediatric Brains.
Journal: Experimental neurobiology
Status: data only, 1 dataset cited

Friday, 29 September 2023 (1 paper)

[1549] doi:10.1038/s41467-023-41710-y [paper, repository]
Photostimulation of brain lymphatics in male newborn and adult rodents for therapy of intraventricular hemorrhage.
Journal: Nature communications
Authors' code: HUST-LAB/MLV-diameter (no license)
Status: code verified, 1 file readable, 2 matches

Thursday, 28 September 2023 (1 paper)

[1550] doi:10.3389/fnhum.2023.1147352 [paper, repository]
Changes in the superior longitudinal fasciculus and anterior thalamic radiation in the left brain are associated with developmental dyscalculia.
Journal: Frontiers in human neuroscience
Authors' code: OSF c2bng (no license)
Status: empty repository

Wednesday, 27 September 2023 (1 paper)

[1551] doi:10.1038/s41467-023-40749-1 [paper, repository]
Retina-derived signals control pace of neurogenesis in visual brain areas but not circuit assembly.
Journal: Nature communications
Authors' code: nbviewer.org/github/scverse (no license)
Status: dead link

Tuesday, 26 September 2023 (1 paper)

[1552] doi:10.1016/j.isci.2023.108056 [paper]
Absence of Embigin accelerates hearing loss and causes sub-viability, brain and heart defects in C57BL/6N mice due to interaction with <i>Cdh23</i><sup><i>ahl</i></sup>.
Journal: iScience
Status: code on request

Monday, 25 September 2023 (1 paper)

[1553] doi:10.3390/ijms241914522 [paper, data]
Differential Effects of Hypothermia and SZR72 on Cerebral Kynurenine and Kynurenic Acid in a Piglet Model of Hypoxic-Ischemic Encephalopathy.
Journal: International journal of molecular sciences
Status: data only, 1 dataset cited

Saturday, 23 September 2023 (1 paper)

[1554] doi:10.1038/s41467-023-41652-5 [paper, repository]
Non-uniform temporal scaling of developmental processes in the mammalian cortex.
Journal: Nature communications
Authors' code: fenlon-suarez-lab/histology-analyses (no license)
Status: code verified, 4 files readable, 1 match

Friday, 22 September 2023 (1 paper)

[1555] doi:10.1038/s41467-023-41492-3 [paper, repository]
A branching model of lineage differentiation underpinning the neurogenic potential of enteric glia.
Journal: Nature communications
Status: code verified, 12 files readable, 4 matches

Thursday, 21 September 2023 (1 paper)

[1556] doi:10.1155/2023/5038317 [paper, repository]
Mapping the Landscape of Magnetic Field Effects on Neural Regeneration and Repair: A Combined Systematic Review, Mathematical Model, and Meta-Analysis.
Journal: Journal of tissue engineering and regenerative medicine
Authors' code: supp:PMC11918650/5038317.f1.zip (no license)
Status: empty repository

Wednesday, 20 September 2023 (1 paper)

[1557] doi:10.1101/gr.277881.123 [paper, repository]
Single-nucleus transcriptomic mapping uncovers targets for traumatic brain injury.
Journal: Genome research
Authors' code: limanrui/scseq (no license)
Status: empty repository, 1 file readable

Tuesday, 19 September 2023 (3 papers)

[1558] doi:10.1111/add.16330 [paper, repository]
Brain structural covariance network features are robust markers of early heavy alcohol use.
Journal: Addiction (Abingdon, England)
Status: code verified, 7 files readable
[1559] doi:10.1038/s41467-023-41499-w [paper, repository]
Network controllability of structural connectomes in the neonatal brain.
Journal: Nature communications
Status: code verified, 16 files readable, 1 match
[1560] doi:10.3389/fphar.2023.1242109 [paper, data]
Methamphetamine exposure drives cell cycle exit and aberrant differentiation in rat hippocampal-derived neurospheres.
Journal: Frontiers in pharmacology
Status: data only, 1 dataset cited

Friday, 15 September 2023 (1 paper)

[1561] doi:10.1016/j.dcn.2023.101301 [paper, repository]
An intracellular isotropic diffusion signal is positively associated with pubertal development in white matter.
Journal: Developmental cognitive neuroscience
Authors' code: 3tissue.github.io/doc (no license), mrtrix.org (no license)
Status: code verified

Thursday, 14 September 2023 (1 paper)

[1562] doi:10.1016/j.xjmad.2023.100025 [paper, repository]
Characterizing positive and negative valence systems function in adolescent depression: An RDoC-informed approach integrating multiple neural measures.
Journal: Journal of mood and anxiety disorders
Authors' code: kodiologist/survivor (gnu), OSF 8m6te (no license)
Status: code verified, 2 files readable

Wednesday, 13 September 2023 (3 papers)

[1563] doi:10.1038/s41586-023-06473-y [paper, repository]
Single-cell brain organoid screening identifies developmental defects in autism.
Journal: Nature
Authors' code: quadbiolab/Pando (MIT), quadbiolab/ASD_CHOOSE (no license)
Status: code verified, 35 files readable, 9 matches
[1564] doi:10.1016/j.ebiom.2023.104784 [paper, repository]
Long-COVID cognitive impairments and reproductive hormone deficits in men may stem from GnRH neuronal death.
Journal: EBioMedicine
Authors' code: sreekala03/Gonado_Covid (no license)
Status: code verified, 2 files readable, 2 matches
[1565] doi:10.1016/j.isci.2023.107920 [paper, data]
Prenatal alcohol alters inflammatory signatures in enteric portal tissues following adult-onset cerebrovascular ischemic stroke.
Journal: iScience
Status: code on request, 1 dataset cited

Tuesday, 12 September 2023 (1 paper)

[1566] doi:10.3389/fcell.2023.1271178 [paper, data]
ADAM11 a novel regulator of Wnt and BMP4 signaling in neural crest and cancer.
Journal: Frontiers in cell and developmental biology
Status: data only, 1 dataset cited

Friday, 8 September 2023 (1 paper)

[1567] doi:10.3389/fnins.2023.1249973 [paper, data]
Expression of the schizophrenia associated gene <i>FEZ1</i> in the early developing fetal human forebrain.
Journal: Frontiers in neuroscience
Status: data only, 1 dataset cited

Thursday, 7 September 2023 (1 paper)

[1568] doi:10.3389/fgene.2023.1233657 [paper, data]
MBMethPred: a computational framework for the accurate classification of childhood medulloblastoma subgroups using data integration and AI-based approaches.
Journal: Frontiers in genetics
Status: data only, 1 dataset cited

Wednesday, 6 September 2023 (2 papers)

[1569] doi:10.1126/sciadv.adg1261 [paper, repository]
Topological packing statistics of living and nonliving matter.
Journal: Science advances
Authors' code: Zenodo 7931085 (CC-BY-4.0), Dom-Skinner/TopologicalAnalysis (no license)
Status: code verified, 12 files readable, 1 match
[1570] doi:10.3389/frdem.2023.1198006 [paper, repository]
Beneficial effects of physical exercise and an orally active mGluR2/3 antagonist pro-drug on neurogenesis and behavior in an Alzheimer's amyloidosis model.
Journal: Frontiers in dementia
Authors' code: mesudebicak/alzheimersdiseaseresearch (no license)
Status: code verified, 1 file readable

Tuesday, 5 September 2023 (2 papers)

[1571] doi:10.7554/elife.86116 [paper, repository]
Manganese-enhanced magnetic resonance imaging reveals light-induced brain asymmetry in embryo.
Journal: eLife
Authors' code: Zenodo 7589348 (cc-by-nc-sa-1.0)
Status: code verified
[1572] doi:10.1016/j.stem.2023.08.009 [paper, data]
LIF signaling regulates outer radial glial to interneuron fate during human cortical development.
Journal: Cell stem cell
Status: data only, 1 dataset cited

Monday, 4 September 2023 (1 paper)

[1573] doi:10.1186/s13073-023-01224-0 [paper, data]
Revealing the developmental origin and lineage predilection of neural progenitors within human bone marrow via single-cell analysis: implications for regenerative medicine.
Journal: Genome medicine
Status: data only, 1 dataset cited

Sunday, 3 September 2023 (2 papers)

[1574] doi:10.1016/j.dcn.2023.101293 [paper, repository]
Lateralization of the cerebral network of inhibition in children before and after cognitive training.
Journal: Developmental cognitive neuroscience
Authors' code: OSF 8t9nx (no license)
Status: code verified, 1 file readable, 3 matches
[1575] doi:10.1016/j.dcn.2023.101294 [paper, data]
Associations between alcohol use and sex-specific maturation of subcortical gray matter morphometry from adolescence to adulthood: Replication across two longitudinal samples.
Journal: Developmental cognitive neuroscience
Status: data only, 2 datasets cited

Friday, 1 September 2023 (2 papers)

[1576] doi:10.1093/cercor/bhad281 [paper, repository]
DOT1L deletion impairs the development of cortical parvalbumin-expressing interneurons.
Journal: Cerebral cortex (New York, N.Y. : 1991)
Authors' code: Vogel-lab/DOT1L-interneuron-development (no license)
Status: code verified, 4 files readable
[1577] doi:10.1101/gad.350896.123 [paper, data]
Allelic chromatin structure precedes imprinted expression of <i>Kcnk9</i> during neurogenesis.
Journal: Genes & development
Status: data only, 1 dataset cited

Thursday, 31 August 2023 (2 papers)

[1578] doi:10.1186/s11689-023-09498-6 [paper, repository]
Neurogenetic mechanisms of risk for ADHD: Examining associations of polygenic scores and brain volumes in a population cohort.
Journal: Journal of neurodevelopmental disorders
Authors' code: OSF whjuq (no license)
Status: empty repository
[1579] doi:10.3389/fgene.2023.1181775 [paper, data]
Dysregulation of core neurodevelopmental pathways-a common feature of cancers with perineural invasion.
Journal: Frontiers in genetics
Status: data only, 1 dataset cited

Wednesday, 30 August 2023 (1 paper)

[1580] doi:10.3390/ijms241713484 [paper, data]
Prenatal Alcohol Exposure Impairs the Placenta-Cortex Transcriptomic Signature, Leading to Dysregulation of Angiogenic Pathways.
Journal: International journal of molecular sciences
Status: data only, 1 dataset cited

Sunday, 27 August 2023 (1 paper)

[1581] doi:10.3390/diagnostics13172774 [paper, repository]
A Brain Morphometry Study with Across-Site Harmonization Using a ComBat-Generalized Additive Model in Children and Adolescents.
Journal: Diagnostics (Basel, Switzerland)
Authors' code: rpomponio/neuroHarmonize (MIT)
Status: code verified, 12 files readable, 1 match

Saturday, 26 August 2023 (1 paper)

[1582] doi:10.1186/s12916-023-03023-1 [paper, repository]
Identification and prediction model of placenta-brain axis genes associated with neurodevelopmental delay in moderate and late preterm children.
Journal: BMC medicine
Authors' code: OpenGene/fastp (MIT)
Status: code verified, 68 files readable

Friday, 25 August 2023 (1 paper)

[1583] doi:10.1016/j.isci.2023.107710 [paper]
Role of caveolin-1 in metabolic programming of fetal brain.
Journal: iScience
Status: code on request

Thursday, 24 August 2023 (2 papers)

[1584] doi:10.1242/dev.201651 [paper, data]
Neurogenesis redirects β-catenin from adherens junctions to the nucleus to promote axonal growth.
Journal: Development (Cambridge, England)
Status: data only, 2 datasets cited
[1585] doi:10.1007/s00429-023-02692-1 [paper, repository]
Altered corpus callosum structure in adolescents with cerebral palsy: connection to gait and balance.
Journal: Brain structure & function
Authors' code: tjrantal/javaMSE (GPL)
Status: code verified, 14 files readable

Tuesday, 22 August 2023 (1 paper)

[1586] doi:10.1371/journal.pone.0273269 [paper, repository]
Bright light therapy and early morning attention, mathematical performance, electroencephalography and brain connectivity in adolescents with morning sleepiness.
Journal: PloS one
Authors' code: supp:PMC10443881/pone.0273269.s010.Rmd (no license)
Status: code verified, 1 file readable, 3 matches

Thursday, 17 August 2023 (1 paper)

[1587] doi:10.1038/s41588-023-01475-y [paper, repository]
Genetic insights into human cortical organization and development through genome-wide analyses of 2,347 neuroimaging phenotypes.
Journal: Nature genetics
Status: code verified, 81 files readable, 4 matches

Wednesday, 16 August 2023 (3 papers)

[1588] doi:10.7554/elife.80250 [paper, repository]
Adult-born granule cells improve stimulus encoding and discrimination in the dentate gyrus.
Journal: eLife
Authors' code: diegoarri91/iclamp-glm (BSD-3-Clause)
Status: code verified, 49 files readable, 1 match
[1589] doi:10.1073/pnas.2211986120 [paper, data]
<i>Ret</i> deficiency decreases neural crest progenitor proliferation and restricts fate potential during enteric nervous system development.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited
[1590] doi:10.1038/s43856-023-00342-5 [paper, repository]
Infant movement classification through pressure distribution analysis.
Journal: Communications medicine
Authors' code: Zenodo 8104097 (CC-BY-4.0)
Status: code verified, 10 files readable, 2 matches

Tuesday, 15 August 2023 (3 papers)

[1591] doi:10.1038/s41398-023-02581-5 [paper, repository]
Neural representations of anxiety in adolescents with anorexia nervosa: a multivariate approach.
Journal: Translational psychiatry
Authors' code: bbp-lab/seiger-2023 (no license)
Status: code verified, 6 files readable, 2 matches
[1592] doi:10.1038/s41598-023-40244-z [paper]
Determining regional brain growth in premature and mature infants in relation to age at MRI using deep neural networks.
Journal: Scientific reports
Status: code on request
[1593] doi:10.1038/s41467-023-40079-2 [paper, repository]
Association between vmPFC gray matter volume and smoking initiation in adolescents.
Journal: Nature communications
Authors' code: Shitong-Xiang/Smoking (no license)
Status: code verified, 8 files readable, 1 match

Monday, 14 August 2023 (1 paper)

[1594] doi:10.1101/2023.08.11.552951 [paper, data]
A developmental increase of inhibition promotes the emergence of hippocampal ripples
Journal: bioRxiv (preprint)
Status: data only, 1 dataset cited

Saturday, 12 August 2023 (1 paper)

[1595] doi:10.1016/j.dcn.2023.101290 [paper, data]
Adolescents' neural sensitivity to high and low popularity: Longitudinal links to risk-taking and prosocial behavior.
Journal: Developmental cognitive neuroscience
Status: data only, 1 dataset cited

Friday, 11 August 2023 (1 paper)

[1596] doi:10.1159/000533203 [paper, data]
Automatic Deep Learning-Based Pipeline for Automatic Delineation and Measurement of Fetal Brain Structures in Routine Mid-Trimester Ultrasound Images.
Journal: Fetal diagnosis and therapy
Status: data only, 2 datasets cited

Thursday, 10 August 2023 (3 papers)

[1597] doi:10.1007/s12035-023-03522-5 [paper]
Sex Differences in Long-term Outcome of Prenatal Exposure to Excess Glucocorticoids-Implications for Development of Psychiatric Disorders.
Journal: Molecular neurobiology
Status: code on request
[1598] doi:10.1038/s41467-023-39789-4 [paper, data]
NvPrdm14d-expressing neural progenitor cells contribute to non-ectodermal neurogenesis in Nematostella vectensis.
Journal: Nature communications
Status: data only, 3 datasets cited
[1599] doi:10.1162/imag_a_00001 [paper, repository]
Developmental changes in individual alpha frequency: Recording EEG data during public engagement events.
Journal: Imaging neuroscience (Cambridge, Mass.)
Authors' code: OSF ct2xw (no license)
Status: code verified, 2 files readable, 3 matches

Wednesday, 9 August 2023 (2 papers)

[1600] doi:10.1016/j.celrep.2023.112957 [paper]
Tle4 controls both developmental acquisition and early post-natal maturation of corticothalamic projection neuron identity.
Journal: Cell reports
Status: code on request
[1601] doi:10.3390/s23167037 [paper, repository]
A Modified Aquila-Based Optimized XGBoost Framework for Detecting Probable Seizure Status in Neonates.
Journal: Sensors (Basel, Switzerland)
Authors' code: MIrazul29/NSD_MAO-XGB (no license)
Status: code verified, 12 files readable, 5 matches

Monday, 7 August 2023 (1 paper)

[1602] doi:10.1007/s10802-023-01106-4 [paper, repository]
Developmental Trajectories of Internalizing and Externalizing Symptoms in Youth and Associated Gender Differences: A Directed Network Perspective.
Journal: Research on child and adolescent psychopathology
Authors' code: OSF fcuhm (no license)
Status: code verified, 1 file readable

Saturday, 5 August 2023 (2 papers)

[1603] doi:10.1038/s41467-023-40446-z [paper, repository]
Self-supervised learning with application for infant cerebellum segmentation and analysis.
Journal: Nature communications
Authors' code: DBC-Lab/Self_Supervised_Learning (other), Zenodo 8050825 (other-open)
Status: code verified, 5 files readable
[1604] doi:10.1016/j.ijchp.2023.100401 [paper, repository]
Childhood trauma is linked to abnormal static-dynamic brain topology in adolescents with major depressive disorder.
Journal: International journal of clinical and health psychology : IJCHP
Authors' code: Yicheng-Long/dynamic_graph_metrics (no license)
Status: code verified, 4 files readable, 2 matches

Friday, 4 August 2023 (2 papers)

[1605] doi:10.1186/s12916-023-02920-9 [paper, data]
Neurodevelopmental risk and adaptation as a model for comorbidity among internalizing and externalizing disorders: genomics and cell-specific expression enriched morphometric study.
Journal: BMC medicine
Status: data only, 8 datasets cited
[1606] doi:10.3389/fnins.2023.1226181 [paper, data]
TUBB3 and KIF21A in neurodevelopment and disease.
Journal: Frontiers in neuroscience
Status: data only, 2 datasets cited

Tuesday, 1 August 2023 (5 papers)

[1607] doi:10.1093/scan/nsac039 [paper, data]
Development of social feedback processing and responses in childhood: an fMRI test-replication design in two age cohorts.
Journal: Social cognitive and affective neuroscience
Status: data only, 1 dataset cited
[1608] doi:10.1093/cercor/bhad243 [paper, repository]
Geodesic theory of long association fibers arrangement in the human fetal cortex.
Journal: Cerebral cortex (New York, N.Y. : 1991)
Authors' code: KazuyaHoribe/GeodesicTheory (no license)
Status: empty repository, 1 file readable
[1609] doi:10.1073/pnas.2221533120 [paper, repository]
Changes in patterns of age-related network connectivity are associated with risk for schizophrenia.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: trendscenter.org/software/gift (no license), Zenodo 7948162 (CC-BY-4.0)
Status: code verified
[1610] doi:10.1016/j.neuroimage.2023.120287 [paper, repository]
Profiling intra- and inter-individual differences in brain development across early adolescence.
Journal: NeuroImage
Authors' code: 62442katieb/deltaABCD_variability (no license)
Status: dead link
[1611] doi:10.1016/j.ynpai.2023.100145 [paper, data]
Gene expression changes in the cerebellum are associated with persistent post-injury pain in adolescent rats exposed to early life stress.
Journal: Neurobiology of pain (Cambridge, Mass.)
Status: data only, 1 dataset cited

Saturday, 29 July 2023 (2 papers)

[1612] doi:10.1016/j.dcn.2023.101287 [paper, repository]
Resting brain activity in early childhood predicts IQ at 18 years.
Journal: Developmental cognitive neuroscience
Authors' code: OSF 4hfc7 (no license)
Status: code verified, 1 file readable, 2 matches
[1613] doi:10.1016/j.isci.2023.107514 [paper]
Intergenerational association of gut microbiota and metabolism with perinatal folate metabolism and neural tube defects.
Journal: iScience
Status: code on request

Friday, 28 July 2023 (1 paper)

[1614] doi:10.1186/s13287-023-03422-4 [paper, data]
hESC-derived striatal progenitors grafted into a Huntington's disease rat model support long-term functional motor recovery by differentiating, self-organizing and connecting into the lesioned striatum.
Journal: Stem cell research & therapy
Status: data only, 3 datasets cited

Wednesday, 26 July 2023 (4 papers)

[1615] doi:10.1038/s41380-023-02178-w [paper]
In vivo evidence of microstructural hypo-connectivity of brain white matter in 22q11.2 deletion syndrome.
Journal: Molecular psychiatry
Status: code on request
[1616] doi:10.1016/j.devcel.2023.07.003 [paper, repository]
A transcriptional and regulatory map of mouse somite maturation.
Journal: Developmental cell
Authors' code: alexdobin/STAR (MIT), lh3/bwa (GPL-3.0), arq5x/bedtools2 (MIT), xibarrasoria/somitogenesis2022 (no license)
Status: code verified, 889 files readable, 31 matches
[1617] doi:10.1016/j.dcn.2023.101281 [paper, repository]
The Hitchhiker's guide to longitudinal models: A primer on model selection for repeated-measures methods.
Journal: Developmental cognitive neuroscience
Authors' code: OSF bn6yu (no license)
Status: code verified, 14 files readable, 2 matches
[1618] doi:10.3389/fnut.2023.1190392 [paper, data]
Strain-specific changes in nucleus accumbens transcriptome and motivation for palatable food reward in mice exposed to maternal separation.
Journal: Frontiers in nutrition
Status: data only, 1 dataset cited

Tuesday, 25 July 2023 (1 paper)

[1619] doi:10.1016/j.ynirp.2023.100179 [paper, data]
White matter microstructural integrity continues to develop from adolescence to young adulthood in mice and humans: Same phenotype, different mechanism.
Journal: Neuroimage. Reports
Status: data only, 1 dataset cited

Friday, 21 July 2023 (1 paper)

[1620] doi:10.1038/s41598-023-38854-8 [paper, repository]
Free viewing biases for complex scenes in preschoolers and adults.
Journal: Scientific reports
Authors' code: OSF 78aqf (no license)
Status: code verified, 18 files readable, 2 matches

Thursday, 20 July 2023 (1 paper)

[1621] doi:10.21769/bioprotoc.4722 [paper, repository]
A New Approach to Generate Gastruloids to Develop Anterior Neural Tissues.
Journal: Bio-protocol
Authors' code: Zenodo 7409423 (CC-BY-4.0), Zenodo 4544370 (CC-BY-4.0)
Status: empty repository

Wednesday, 19 July 2023 (1 paper)

[1622] doi:10.1002/mrm.29803 [paper, data]
Real-time fetal brain tracking for functional fetal MRI.
Journal: Magnetic resonance in medicine
Status: data only, 1 dataset cited

Tuesday, 18 July 2023 (1 paper)

[1623] doi:10.3390/jimaging9070145 [paper, repository]
Semi-Automatic GUI Platform to Characterize Brain Development in Preterm Children Using Ultrasound Images.
Journal: Journal of imaging
Authors' code: Derther/GUI-semi-automatic-application (no license)
Status: dead link

Monday, 17 July 2023 (5 papers)

[1624] doi:10.1073/pnas.2221120120 [paper, data]
Ancient vertebrate dermal armor evolved from trunk neural crest.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited
[1625] doi:10.1038/s41598-023-38430-0 [paper, repository]
Unsupervised abnormality detection in neonatal MRI brain scans using deep learning.
Journal: Scientific reports
Status: code verified, 6 files readable, 1 match
[1626] doi:10.1038/s42003-023-05121-5 [paper, repository]
Arousal state transitions occlude sensory-evoked neurovascular coupling in neonatal mice.
Journal: Communications biology
Authors' code: Zenodo 7809100 (CC0-1.0), Zenodo 7809099 (CC0-1.0)
Status: code verified, 70 files readable, 13 matches
[1627] doi:10.1016/j.dcn.2023.101280 [paper, repository]
Individual differences in time-varying and stationary brain connectivity during movie watching from childhood to early adulthood: Age, sex, and behavioral associations.
Journal: Developmental cognitive neuroscience
Authors' code: OSF bwzsd (no license)
Status: code verified, 10 files readable
[1628] doi:10.3389/fgene.2023.1222619 [paper, data]
Epigenetic associations with adolescent grey matter maturation and cognitive development.
Journal: Frontiers in genetics
Status: data only, 1 dataset cited

Saturday, 15 July 2023 (1 paper)

[1629] doi:10.1016/j.xpro.2023.102413 [paper]
Generation of mouse hippocampal brain organoids from primary embryonic neural stem cells.
Journal: STAR protocols
Status: code on request

Thursday, 13 July 2023 (3 papers)

[1630] doi:10.1242/dev.201509 [paper, data]
SIX1+PAX3+ identify a progenitor for myogenic lineage commitment from hPSCs.
Journal: Development (Cambridge, England)
Status: data only, 1 dataset cited
[1631] doi:10.1371/journal.pone.0288488 [paper, repository]
The PiNe box: Development and validation of an electronic device to time-lock multimodal responses to sensory stimuli in hospitalised infants.
Journal: PloS one
Status: code verified, 1 file readable, 1 match
[1632] doi:10.1038/s43587-023-00449-3 [paper, repository]
Chromatin accessibility dynamics of neurogenic niche cells reveal defects in neural stem cell adhesion and migration during aging.
Journal: Nature aging
Status: code verified, 96 files readable, 38 matches

Wednesday, 12 July 2023 (1 paper)

[1633] doi:10.1371/journal.pone.0288399 [paper, data]
Corneal confocal microscopy demonstrates sensory nerve loss in children with autism spectrum disorder.
Journal: PloS one
Status: data only, 1 dataset cited

Tuesday, 11 July 2023 (3 papers)

[1634] doi:10.1186/s12916-023-02916-5 [paper, data]
Expression of the endocannabinoid system and response to cannabinoid components by the human fetal testis.
Journal: BMC medicine
Status: data only, 1 dataset cited
[1635] doi:10.1038/s41467-023-39645-5 [paper, data]
Gain and loss of function variants in EZH1 disrupt neurogenesis and cause dominant and recessive neurodevelopmental disorders.
Journal: Nature communications
Status: data only, 5 datasets cited
[1636] doi:10.1093/ofid/ofad356 [paper, data]
Stillbirths and Neonatal Deaths Caused by Group B <i>Streptococcus</i> in Africa and South Asia Identified Through Child Health and Mortality Prevention Surveillance (CHAMPS).
Journal: Open forum infectious diseases
Status: data only, 2 datasets cited

Sunday, 9 July 2023 (1 paper)

[1637] doi:10.7150/thno.84133 [paper, data]
Recent advances in endogenous neural stem/progenitor cell manipulation for spinal cord injury repair.
Journal: Theranostics
Status: data only, 1 dataset cited

Saturday, 8 July 2023 (1 paper)

[1638] doi:10.1016/j.celrep.2023.112783 [paper]
Cortical regulation of neurogenesis and cell proliferation in the ventral subventricular zone.
Journal: Cell reports
Status: code on request

Thursday, 6 July 2023 (2 papers)

[1639] doi:10.1038/s41588-023-01435-6 [paper, repository]
Spatiotemporal transcriptomic maps of whole mouse embryos at the onset of organogenesis.
Journal: Nature genetics
Status: code verified, 71 files readable, 10 matches
[1640] doi:10.1186/s13148-023-01519-4 [paper, data]
Prenatal delta-9-tetrahydrocannabinol exposure is associated with changes in rhesus macaque DNA methylation enriched for autism genes.
Journal: Clinical epigenetics
Status: data only, 1 dataset cited

Wednesday, 5 July 2023 (1 paper)

[1641] doi:10.1371/journal.pone.0286596 [paper, data]
Ethanol and caffeine age-dependently alter brain and retinal neurochemical levels without affecting morphology of juvenile and adult zebrafish (Danio rerio).
Journal: PloS one
Status: data only, 1 dataset cited

Monday, 3 July 2023 (3 papers)

[1642] doi:10.1038/s41467-023-39411-7 [paper, repository]
Spatiotemporal proteomic atlas of multiple brain regions across early fetal to neonatal stages in cynomolgus monkey.
Journal: Nature communications
Authors' code: Zenodo 7979998 (other-open), daishaoxing/proteomic_braindev (no license)
Status: code verified, 4 files readable, 10 matches
[1643] doi:10.1111/bpa.13186 [paper, data]
Krüppel-like factor 7 deficiency disrupts corpus callosum development and neuronal migration in the developing mouse cerebral cortex.
Journal: Brain pathology (Zurich, Switzerland)
Status: data only, 1 dataset cited
[1644] doi:10.3389/fcell.2023.1212375 [paper, data]
Glycolytic activity is required for the onset of neural plate folding during neural tube closure in mouse embryos.
Journal: Frontiers in cell and developmental biology
Status: data only, 1 dataset cited

Saturday, 1 July 2023 (3 papers)

[1645] doi:10.1093/scan/nsad034 [paper, data]
Age-related differences in interference control in the context of a finger-lifting task: an fMRI study.
Journal: Social cognitive and affective neuroscience
Status: data only, 1 dataset cited
[1646] doi:10.1136/bmjpo-2023-001966 [paper, repository]
NeuroCNVscore: a tissue-specific framework to prioritise the pathogenicity of CNVs in neurodevelopmental disorders.
Journal: BMJ paediatrics open
Authors' code: lxsbch/neuroCNVscore (MIT), macarthur-lab/gene_lists (no license)
Status: code verified, 27 files readable, 3 matches
[1647] doi:10.1117/1.nph.10.3.035010 [paper]
Developing customized NIRS-EEG for infant sleep research: methodological considerations.
Journal: Neurophotonics
Status: code on request

Friday, 30 June 2023 (2 papers)

[1648] doi:10.1242/dev.201484 [paper, data]
A chromatin remodelling SWI/SNF subunit, Snr1, regulates neural stem cell determination and differentiation.
Journal: Development (Cambridge, England)
Status: data only, 1 dataset cited
[1649] doi:10.1038/s41598-023-37775-w [paper, data]
Developmental models of motor-evoked potential features by transcranial magnetic stimulation across age groups from childhood to adulthood.
Journal: Scientific reports
Status: data only, 3 datasets cited

Thursday, 29 June 2023 (3 papers)

[1650] doi:10.15252/embr.202256233 [paper, repository]
DOT1L activity affects neural stem cell division mode and reduces differentiation and ASNS expression.
Journal: EMBO reports
Authors' code: aertslab/SCENIC (GPL-3.0), Vogel-lab/DOT1L_activity_neocortex-paper (CC0-1.0)
Status: code verified, 55 files readable, 13 matches
[1651] doi:10.3389/fnins.2023.1219753 [paper, repository]
Exploring the correlation between genetic transcription and multi-temporal developmental autism spectrum disorder using resting-state functional magnetic resonance imaging.
Journal: Frontiers in neuroscience
Status: code verified, 9 files readable, 2 matches
[1652] doi:10.3390/jdb11030029 [paper, data]
The Tumor Suppressor <i>Adenomatous Polyposis Coli (apc)</i> Is Required for Neural Crest-Dependent Craniofacial Development in Zebrafish.
Journal: Journal of developmental biology
Status: data only, 1 dataset cited

Wednesday, 28 June 2023 (1 paper)

[1653] doi:10.1002/jcv2.12184 [paper, repository]
Can we diagnose mental disorders in children? A large-scale assessment of machine learning on structural neuroimaging of 6916 children in the adolescent brain cognitive development study.
Journal: JCPP advances
Authors' code: Zenodo 7968586 (MIT), ai-med/abcd_study (MIT)
Status: code verified, 68 files readable, 5 matches

Tuesday, 27 June 2023 (1 paper)

[1654] doi:10.1371/journal.pbio.3002160 [paper, repository]
Preservation of developmental spontaneous activity enables early auditory system maturation in deaf mice.
Journal: PLoS biology
Authors' code: Zenodo 7896212 (other-open), ckersbe1/gjb2-development-ms (no license)
Status: code verified, 308 files readable, 8 matches

Monday, 26 June 2023 (1 paper)

[1655] doi:10.1128/msystems.00415-23 [paper, data]
Sodium butyrate facilitates CRHR2 expression to alleviate HPA axis hyperactivity in autism-like rats induced by prenatal lipopolysaccharides through histone deacetylase inhibition.
Journal: mSystems
Status: data only, 1 dataset cited

Sunday, 25 June 2023 (1 paper)

[1656] doi:10.1016/j.neuroimage.2023.120234 [paper]
Mechanical stiffness and anisotropy measured by MRE during brain development in the minipig.
Journal: NeuroImage
Status: code on request

Thursday, 22 June 2023 (3 papers)

[1657] doi:10.1038/s41467-023-38974-9 [paper]
Four-dimensional mapping of dynamic longitudinal brain subcortical development and early learning functions in infants.
Journal: Nature communications
Status: code on request
[1658] doi:10.1038/s42003-023-04969-x [paper, repository]
Maturational networks of human fetal brain activity reveal emerging connectivity patterns prior to ex-utero exposure.
Journal: Communications biology
Authors' code: gin.g-node.org/slavakarolis/matnet_paper (no license)
Status: code verified
[1659] doi:10.3389/fnins.2023.1187790 [paper, repository]
Motor learning in developmental coordination disorder: behavioral and neuroimaging study.
Journal: Frontiers in neuroscience
Authors' code: OSF w8gj6 (no license)
Status: empty repository

Wednesday, 21 June 2023 (1 paper)

[1660] doi:10.1186/s13041-023-01044-8 [paper, data]
BCAT1 controls embryonic neural stem cells proliferation and differentiation in the upper layer neurons.
Journal: Molecular brain
Status: data only, 1 dataset cited

Monday, 19 June 2023 (3 papers)

[1661] doi:10.7554/elife.84685 [paper, repository]
Tracing the development and lifespan change of population-level structural asymmetry in the cerebral cortex.
Journal: eLife
Authors' code: jamesmroe/PopAsym (no license), OSF dv9um (no license)
Status: code verified, 17 files readable, 17 matches
[1662] doi:10.1016/j.dcn.2023.101271 [paper, repository]
Delineating disorder-general and disorder-specific dimensions of psychopathology from functional brain networks in a developmental clinical sample.
Journal: Developmental cognitive neuroscience
Authors' code: OSF gt9dk (no license)
Status: code verified, 7 files readable, 4 matches
[1663] doi:10.5498/wjp.v13.i6.386 [paper]
Abnormal volumetric brain morphometry and cerebral blood flow in adolescents with depression.
Journal: World journal of psychiatry
Status: code on request

Saturday, 17 June 2023 (1 paper)

[1664] doi:10.3390/brainsci13060963 [paper, repository]
Cortical Structure Differences in Relation to Age, Sexual Attractions, and Gender Dysphoria in Adolescents: An Examination of Mean Diffusivity and T1 Relaxation Time.
Journal: Brain sciences
Authors' code: borealisdata.ca/dataset.xhtml (no license)
Status: code verified

Friday, 16 June 2023 (2 papers)

[1665] doi:10.1002/advs.202301110 [paper, data]
PDGF-BB-Dependent Neurogenesis Buffers Depressive-Like Behaviors by Inhibition of GABAergic Projection from Medial Septum to Dentate Gyrus.
Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)
Status: data only, 1 dataset cited
[1666] doi:10.3892/ijo.2023.5536 [paper, data]
Activated <i>KRAS</i> reprograms neural progenitor cells to glioma stem cell‑like phenotype.
Journal: International journal of oncology
Status: data only, 1 dataset cited

Wednesday, 14 June 2023 (2 papers)

[1667] doi:10.1038/s41598-023-36727-8 [paper, repository]
Single neonatal estrogen implant sterilizes female animals by decreasing hypothalamic KISS1 expression.
Journal: Scientific reports
Status: code verified, 3 files readable, 3 matches
[1668] doi:10.1016/j.dcn.2023.101268 [paper, repository]
Functional MRI responses to naturalistic stimuli are increasingly typical across early childhood.
Journal: Developmental cognitive neuroscience
Authors' code: BrayNeuroimagingLab/BNL_open (no license)
Status: code verified, 160 files readable, 5 matches

Tuesday, 13 June 2023 (2 papers)

[1669] doi:10.1093/pnasnexus/pgad145 [paper, repository]
Positive parenting moderates associations between childhood stress and corticolimbic structure.
Journal: PNAS nexus
Authors' code: isabellakahhale/CorticoLimbicParenting (no license)
Status: code verified, 3 files readable, 5 matches
[1670] doi:10.3389/fcell.2023.1198148 [paper, data]
Developmental exposures to common environmental contaminants, DEHP and lead, alter adult brain and blood hydroxymethylation in mice.
Journal: Frontiers in cell and developmental biology
Status: data only, 1 dataset cited

Monday, 12 June 2023 (1 paper)

[1671] doi:10.3389/fcell.2023.1175917 [paper]
Gene-nutrient interactions that impact magnesium homeostasis increase risk for neural tube defects in mice exposed to dolutegravir.
Journal: Frontiers in cell and developmental biology
Status: data only

Saturday, 10 June 2023 (1 paper)

[1672] doi:10.1016/j.dcn.2023.101264 [paper, repository]
Developmental patterns and individual differences in responding to social feedback: A longitudinal fMRI study from childhood to adolescence.
Journal: Developmental cognitive neuroscience
Authors' code: OSF sc4k8 (no license)
Status: empty repository

Friday, 9 June 2023 (2 papers)

[1673] doi:10.1523/eneuro.0196-22.2023 [paper, repository]
Long-Term Effects of Preterm Birth on Children's Brain Structure: An Analysis of the Adolescent Brain Cognitive Development (ABCD) Study.
Journal: eNeuro
Authors' code: brayneuroimaginglab/bnl_open (no license)
Status: code verified, 160 files readable
[1674] doi:10.3389/fnins.2023.1188367 [paper, repository]
Mapping corpus callosum surface reduction in fetal alcohol spectrum disorders with sulci and connectivity-based parcellation.
Journal: Frontiers in neuroscience
Status: code verified, 5 files readable, 2 matches

Thursday, 8 June 2023 (2 papers)

[1675] doi:10.26508/lsa.202301957 [paper, data]
Preeclampsia promotes autism in offspring via maternal inflammation and fetal NFκB signaling.
Journal: Life science alliance
Status: data only, 1 dataset cited
[1676] doi:10.1016/j.isci.2023.107070 [paper]
Unbiased characterization of the larval zebrafish enteric nervous system at a single cell transcriptomic level.
Journal: iScience
Status: code on request

Wednesday, 7 June 2023 (4 papers)

[1677] doi:10.1002/acn3.51820 [paper]
Engineered extracellular matrices facilitate brain organoids from human pluripotent stem cells.
Journal: Annals of clinical and translational neurology
Status: code on request
[1678] doi:10.1007/s12021-023-09635-5 [paper, repository]
Geometric Reliability of Super-Resolution Reconstructed Images from Clinical Fetal MRI in the Second Trimester.
Journal: Neuroinformatics
Status: code verified, 308 files readable, 1 match
[1679] doi:10.1016/j.dcn.2023.101261 [paper, repository]
Puberty differentially predicts brain maturation in male and female youth: A longitudinal ABCD Study.
Journal: Developmental cognitive neuroscience
Authors' code: OSF nh649 (no license)
Status: code found, still to be checked
[1680] doi:10.1016/j.isci.2023.107042 [paper, data]
SRSF10 regulates proliferation of neural progenitor cells and affects neurogenesis in developing mouse neocortex.
Journal: iScience
Status: code on request, 1 dataset cited

Tuesday, 6 June 2023 (1 paper)

[1681] doi:10.1073/pnas.2220200120 [paper, repository]
Heterogeneous growth of the insula shapes the human brain.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: BioMedIA/dhcp-structural-pipeline (Apache-2.0), mallelaan/brain_development (no license)
Status: code verified, 1,250 files readable, 4 matches

Monday, 5 June 2023 (3 papers)

[1682] doi:10.1128/mra.00138-23 [paper, data]
Complete Genome Sequence of Invasive MLST-Untypeable Serotype 3 <i>xpt</i>-Deficient Streptococcus pneumoniae Strain B1900, Isolated from the Brain of an Infant Rhesus Monkey (Macaca mulatta) That Died of Meningitis.
Journal: Microbiology resource announcements
Status: data only, 2 datasets cited
[1683] doi:10.1038/s41467-023-38988-3 [paper, repository]
Downregulation of extraembryonic tension controls body axis formation in avian embryos.
Journal: Nature communications
Authors' code: humphreysb/ConvertTDMS (BSD-3-Clause)
Status: code verified, 4 files readable
[1684] doi:10.1038/s41467-023-38953-0 [paper, data]
A multiple super-enhancer region establishes inter-TAD interactions and controls Hoxa function in cranial neural crest.
Journal: Nature communications
Status: data only, 1 dataset cited

Friday, 2 June 2023 (1 paper)

[1685] doi:10.3389/fnins.2023.1174165 [paper, data]
Arcuate fasciculus and pre-reading language development in children with prenatal alcohol exposure.
Journal: Frontiers in neuroscience
Status: data only, 1 dataset cited

Thursday, 1 June 2023 (1 paper)

[1686] doi:10.3389/fnhum.2023.1202103 [paper, repository]
Multivariate prediction of long COVID headache in adolescents using gray matter structural MRI features.
Journal: Frontiers in human neuroscience
Authors' code: raamana/graynet (MIT)
Status: code verified, 37 files readable

Saturday, 27 May 2023 (2 papers)

[1687] doi:10.47626/1516-4446-2023-3037 [paper, repository]
A magnetic resonance imaging-based morphometric and structural covariance network study of Brazilian adolescents stratified by depression risk.
Journal: Revista brasileira de psiquiatria (Sao Paulo, Brazil : 1999)
Authors' code: WhitakerLab/scona (MIT)
Status: code verified, 39 files readable
[1688] doi:10.1038/s41598-023-35721-4 [paper]
The brain regulatory program predates central nervous system evolution.
Journal: Scientific reports
Status: data only

Thursday, 25 May 2023 (1 paper)

[1689] doi:10.1002/hbm.26317 [paper, repository]
Neural similarity in nucleus accumbens during decision-making for the self and a best friend: Links to adolescents' self-reported susceptibility to peer influence and risk taking.
Journal: Human brain mapping
Authors' code: poldrack/slicetimingcorrection (MIT)
Status: code verified, 4 files readable, 2 matches

Tuesday, 23 May 2023 (4 papers)

[1690] doi:10.1242/dev.201186 [paper, data]
Female reproductive dormancy in Drosophila is regulated by DH31-producing neurons projecting into the corpus allatum.
Journal: Development (Cambridge, England)
Status: data only, 1 dataset cited
[1691] doi:10.1038/s41467-023-38799-6 [paper, data]
Adolescent stress impairs postpartum social behavior via anterior insula-prelimbic pathway in mice.
Journal: Nature communications
Status: data only, 1 dataset cited
[1692] doi:10.1186/s13229-023-00549-2 [paper, repository]
Identifying the neurodevelopmental and psychiatric signatures of genomic disorders associated with intellectual disability: a machine learning approach.
Journal: Molecular autism
Authors' code: NADonnelly/nd_cnv_ml (no license), nadonnelly.shinyapps.io/cnv_ml_app (no license)
Status: code verified, 17 files readable, 15 matches
[1693] doi:10.1101/2023.05.23.540979 [paper, repository]
Integrating stereotypes and factual evidence in interpersonal communication
Journal: bioRxiv (preprint)
Authors' code: OSF 3fre2 (no license)
Status: empty repository

Friday, 19 May 2023 (1 paper)

[1694] doi:10.1016/j.isci.2023.106909 [paper, repository]
Integrative systems biology characterizes immune-mediated neurodevelopmental changes in murine Zika virus microcephaly.
Journal: iScience
Authors' code: ncbi.nlm.nih.gov/geo (no license), cole-trapnell-lab/cufflinks (BSL-1.0)
Status: code verified, 182 files readable, 1 match

Thursday, 18 May 2023 (2 papers)

[1695] doi:10.1038/s41593-023-01321-8 [paper, repository]
Genetic patterning for child psychopathology is distinct from that for adults and implicates fetal cerebellar development.
Journal: Nature neuroscience
Authors' code: hughesdy/ABCD-NDV-CBC (no license)
Status: code verified, 7 files readable, 7 matches
[1696] doi:10.1016/j.dcn.2023.101256 [paper, repository]
Characterizing the dimensional structure of early-life adversity in the Adolescent Brain Cognitive Development (ABCD) Study.
Journal: Developmental cognitive neuroscience
Authors' code: OSF 28cb7 (no license)
Status: code verified, 13 files readable, 10 matches

Monday, 15 May 2023 (5 papers)

[1697] doi:10.1098/rstb.2022.0083 [paper, repository]
Developmental origin underlies evolutionary rate variation across the placental skull.
Journal: Philosophical transactions of the Royal Society of London. Series B, Biological sciences
Status: code verified, 12 files readable, 3 matches
[1698] doi:10.7554/elife.80878 [paper, repository]
Toward a more informative representation of the fetal-neonatal brain connectome using variational autoencoder.
Journal: eLife
Authors' code: libilab/rsfMRI-VAE (no license)
Status: code verified, 137 files readable, 4 matches
[1699] doi:10.7554/elife.85410 [paper, repository]
Neural mechanisms of parasite-induced summiting behavior in 'zombie' <i>Drosophila</i>.
Journal: eLife
Authors' code: de-Bivort-Lab/dblab-schematics (no license), lab.debivort.org/zombie-summiting (no license), Zenodo 7464925 (CC-BY-4.0)
Status: code verified, 1 file readable
[1700] doi:10.3389/fcell.2023.1140554 [paper]
Developmentally regulated expression of integrin alpha-6 distinguishes neural crest derivatives in the skin.
Journal: Frontiers in cell and developmental biology
Status: data only
[1701] doi:10.3389/fnut.2023.1146804 [paper, data]
Calorie restriction and pravastatin administration during pregnancy in obese rhesus macaques modulates maternal and infant metabolism and infant brain and behavioral development.
Journal: Frontiers in nutrition
Status: data only, 1 dataset cited

Saturday, 13 May 2023 (1 paper)

[1702] doi:10.3390/ijms24108721 [paper]
Somatosensory-Evoked Early Sharp Waves in the Neonatal Rat Hippocampus.
Journal: International journal of molecular sciences
Status: code on request

Thursday, 11 May 2023 (1 paper)

[1703] doi:10.1016/j.dcn.2023.101254 [paper, repository]
Music impacts brain cortical microstructural maturation in very preterm infants: A longitudinal diffusion MR imaging study.
Journal: Developmental cognitive neuroscience
Status: code verified

Wednesday, 10 May 2023 (1 paper)

[1704] doi:10.3390/diagnostics13101690 [paper, data]
Fetal Health State Detection Using Interval Type-2 Fuzzy Neural Networks.
Journal: Diagnostics (Basel, Switzerland)
Status: data only, 2 datasets cited

Tuesday, 9 May 2023 (1 paper)

[1705] doi:10.3389/fcell.2023.1084245 [paper, data]
Deficiency of <i>Wdr60</i> and <i>Wdr34</i> cause distinct neural tube malformation phenotypes in early embryos.
Journal: Frontiers in cell and developmental biology
Status: data only, 1 dataset cited

Saturday, 6 May 2023 (1 paper)

[1706] doi:10.1007/s11011-023-01210-w [paper, data]
Neurometabolic changes in a rat pup model of type C hepatic encephalopathy depend on age at liver disease onset.
Journal: Metabolic brain disease
Status: data only, 1 dataset cited

Friday, 5 May 2023 (3 papers)

[1707] doi:10.1126/sciadv.abq7553 [paper, repository]
Single-cell analysis of the postnatal dorsal V-SVZ reveals a role for Bmpr1a signaling in silencing pallial germinal activity.
Journal: Science advances
Authors' code: OlivierRaineteauSBRI/scRNASeq (no license)
Status: code verified, 17 files readable, 22 matches
[1708] doi:10.1097/j.pain.0000000000002900 [paper, repository]
Deep learning-guided postoperative pain assessment in children.
Journal: Pain
Authors' code: wuw2019/CPANN (no license)
Status: empty repository, 1 file readable
[1709] doi:10.1177/09567976231160702 [paper, repository]
Intelligence Polygenic Score Is More Predictive of Crystallized Measures: Evidence From the Adolescent Brain Cognitive Development (ABCD) Study.
Journal: Psychological science
Status: code verified, 3 files readable, 2 matches

Thursday, 4 May 2023 (1 paper)

[1710] doi:10.1371/journal.pone.0277158 [paper, repository]
Associations between resting state functional brain connectivity and childhood anhedonia: A reproduction and replication study.
Journal: PloS one
Authors' code: OSF vy85h (no license)
Status: code verified, 1 file readable, 8 matches

Tuesday, 2 May 2023 (3 papers)

[1711] doi:10.26508/lsa.202201730 [paper, data]
Deletion of SERF2 in mice delays embryonic development and alters amyloid deposit structure in the brain.
Journal: Life science alliance
Status: data only, 1 dataset cited
[1712] doi:10.1038/s41467-023-37778-1 [paper, repository]
State-level macro-economic factors moderate the association of low income with brain structure and mental health in U.S. children.
Journal: Nature communications
Authors' code: OSF t3ev7 (no license)
Status: code verified, 3 files readable, 4 matches
[1713] doi:10.1016/j.dcn.2023.101251 [paper, repository]
Age and vocabulary knowledge differentially influence the N400 and theta responses during semantic retrieval.
Journal: Developmental cognitive neuroscience
Authors' code: juliagoolia28/manuscripts (no license)
Status: code verified, 51 files readable, 7 matches

Monday, 1 May 2023 (5 papers)

[1714] doi:10.4103/1673-5374.355820 [paper]
Neural progenitor cells derived from fibroblasts induced by small molecule compounds under hypoxia for treatment of Parkinson's disease in rats.
Journal: Neural regeneration research
Status: data only
[1715] doi:10.1093/cercor/bhac470 [paper, data]
Expression patterns of NKCC1 in neurons and non-neuronal cells during cortico-hippocampal development.
Journal: Cerebral cortex (New York, N.Y. : 1991)
Status: data only, 6 datasets cited
[1716] doi:10.1093/cercor/bhac511 [paper, data]
The waiting game: investigating the neurobiological transition from acute to persistent pain in adolescent rats.
Journal: Cerebral cortex (New York, N.Y. : 1991)
Status: data only, 1 dataset cited
[1717] doi:10.1038/s41598-023-32922-9 [paper]
Cholesterol biosynthesis modulates differentiation in murine cranial neural crest cells.
Journal: Scientific reports
Status: data only
[1718] doi:10.1001/jamanetworkopen.2023.16067 [paper, repository]
Association of Preterm Birth and Socioeconomic Status With Neonatal Brain Structure.
Journal: JAMA network open
Authors' code: OSF ftv2s (no license)
Status: empty repository

Thursday, 27 April 2023 (4 papers)

[1719] doi:10.1371/journal.pone.0282813 [paper, data]
Serotonergic modulation of normal and abnormal brain dynamics: The genetic influence of the TPH2 G-703T genotype and DNA methylation on wavelet variance in children and adolescents with and without ADHD.
Journal: PloS one
Status: data only, 1 dataset cited
[1720] doi:10.1038/s41598-023-33920-7 [paper, repository]
Generalizability of 3D CNN models for age estimation in diverse youth populations using structural MRI.
Journal: Scientific reports
Status: code verified, 20 files readable, 5 matches
[1721] doi:10.1016/j.stemcr.2023.04.001 [paper, repository]
Generation, genomic characterization, and differentiation of triploid human embryonic stem cells.
Journal: Stem cell reports
Status: code verified, 19 files readable, 8 matches
[1722] doi:10.1016/j.xpro.2023.102245 [paper]
In vivo two-photon calcium imaging of cortical neurons in neonatal mice.
Journal: STAR protocols
Status: code on request

Wednesday, 26 April 2023 (2 papers)

[1723] doi:10.7717/peerj.15259 [paper, data]
Differential expression of some termite neuropeptides and insulin/IGF-related hormones and their plausible functions in growth, reproduction and caste determination.
Journal: PeerJ
Status: data only, 1 dataset cited
[1724] doi:10.1016/j.dcn.2023.101250 [paper, repository]
Longitudinal neonatal brain development and socio-demographic correlates of infant outcomes following preterm birth.
Journal: Developmental cognitive neuroscience
Authors' code: lucyvanes/preterm-dHCP_longitudinal (no license)
Status: code verified, 5 files readable, 6 matches

Tuesday, 25 April 2023 (1 paper)

[1725] doi:10.1117/1.nph.10.2.025005 [paper]
Preictal neuronal and vascular activity precedes the onset of childhood absence seizure: direct current potential shifts and their correlation with hemodynamic activity.
Journal: Neurophotonics
Status: code on request

Monday, 24 April 2023 (2 papers)

[1726] doi:10.1172/jci.insight.164178 [paper, data]
MKRN3 inhibits puberty onset via interaction with IGF2BP1 and regulation of hypothalamic plasticity.
Journal: JCI insight
Status: data only, 1 dataset cited
[1727] doi:10.7554/elife.86273 [paper, data]
Bidirectional regulation of postmitotic H3K27me3 distributions underlie cerebellar granule neuron maturation dynamics.
Journal: eLife
Status: data only, 2 datasets cited

Saturday, 22 April 2023 (1 paper)

[1728] doi:10.3390/genes14050957 [paper, data]
Embryonic Stem Cell-Derived Neurons as a Model System for Epigenome Maturation during Development.
Journal: Genes
Status: data only, 1 dataset cited

Thursday, 20 April 2023 (1 paper)

[1729] doi:10.1007/s10803-023-05980-1 [paper, repository]
An Investigation of Age-related Neuropathophysiology in Autism Spectrum Disorder Using Fixel-based Analysis of Corpus Callosum White Matter Micro- and Macrostructure.
Journal: Journal of autism and developmental disorders
Authors' code: MervSingh/ABIDE-II_FBA (no license)
Status: code verified, 2 files readable

Wednesday, 19 April 2023 (2 papers)

[1730] doi:10.7554/elife.83792 [paper, repository]
Dynamic fibronectin assembly and remodeling by leader neural crest cells prevents jamming in collective cell migration.
Journal: eLife
Authors' code: wdmartinson/neural_crest_project (no license)
Status: code verified, 176 files readable, 8 matches
[1731] doi:10.1038/s41467-023-37980-1 [paper, repository]
Complex computation from developmental priors.
Journal: Nature communications
Authors' code: Zenodo 7689897 (other-open), bdanubius/diffconnect (no license)
Status: code verified, 44 files readable, 2 matches

Tuesday, 18 April 2023 (2 papers)

[1732] doi:10.1021/acschemneuro.3c00062 [paper, repository]
Current Best Practices for Analysis of Dendritic Spine Morphology and Number in Neurodevelopmental Disorder Research.
Journal: ACS chemical neuroscience
Status: code verified, 6 files readable, 3 matches
[1733] doi:10.1093/psyrad/kkad004 [paper]
Regional superficial amygdala resting-state functional connectivity in adults infers childhood maltreatment severity.
Journal: Psychoradiology
Status: code on request

Monday, 17 April 2023 (1 paper)

[1734] doi:10.3389/fnana.2023.1116948 [paper, repository]
Abnormal prenatal brain development in Chiari II malformation.
Journal: Frontiers in neuroanatomy
Authors' code: hub.docker.com/r/davoodk (no license)
Status: code verified

Saturday, 15 April 2023 (2 papers)

[1735] doi:10.1038/s41598-023-33198-9 [paper]
Larger left hippocampal presubiculum is associated with lower risk of antisocial behavior in healthy adults with childhood conduct history.
Journal: Scientific reports
Status: code on request
[1736] doi:10.1016/j.celrep.2023.112380 [paper, data]
Transient suppression of SUMOylation in embryonic stem cells generates embryo-like structures.
Journal: Cell reports
Status: code on request, 2 datasets cited

Thursday, 13 April 2023 (2 papers)

[1737] doi:10.1073/pnas.2218007120 [paper, repository]
Early path dominance as a principle for neurodevelopment.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: rrazban/percolating_brain (no license)
Status: code verified, 32 files readable, 7 matches
[1738] doi:10.1016/j.dcn.2023.101244 [paper, repository]
Brief mock-scan training reduces head motion during real scanning for children: A growth curve study.
Journal: Developmental cognitive neuroscience
Authors' code: zuoxinian/CCS (GPL-2.0)
Status: code verified, 732 files readable, 7 matches

Wednesday, 12 April 2023 (3 papers)

[1739] doi:10.7554/elife.82925 [paper, repository]
Exploring the role of the outer subventricular zone during cortical folding through a physics-based model.
Journal: eLife
Authors' code: SaeedZarzor/BFSimulator (MIT)
Status: code verified, 28 files readable, 10 matches
[1740] doi:10.1126/sciadv.ade4083 [paper, data]
Prosodic cues enhance infants' sensitivity to nonadjacent regularities.
Journal: Science advances
Status: data only, 1 dataset cited
[1741] doi:10.1038/s41598-023-33016-2 [paper]
The hyperexcitability of laterodorsal tegmentum cholinergic neurons accompanies adverse behavioral and cognitive outcomes of prenatal stress.
Journal: Scientific reports
Status: code on request

Tuesday, 11 April 2023 (2 papers)

[1742] doi:10.1016/j.celrep.2023.112371 [paper]
Connexin 43-mediated neurovascular interactions regulate neurogenesis in the adult brain subventricular zone.
Journal: Cell reports
Status: code on request
[1743] doi:10.1162/nol_a_00092 [paper, repository]
Sources of Heterogeneity in Functional Connectivity During English Word Processing in Bilingual and Monolingual Children.
Journal: Neurobiology of language (Cambridge, Mass.)
Authors' code: OSF uv3t6 (no license)
Status: code verified, 1 file readable, 1 match

Monday, 10 April 2023 (2 papers)

[1744] doi:10.1523/jneurosci.0837-22.2023 [paper, data]
Development of BOLD Response to Motion in Human Infants.
Journal: The Journal of neuroscience : the official journal of the Society for Neuroscience
Status: data only, 2 datasets cited
[1745] doi:10.1038/s41398-023-02413-6 [paper, repository]
Effect of schizophrenia common variants on infant brain volumes: cross-sectional study in 207 term neonates in developing Human Connectome Project.
Journal: Translational psychiatry
Authors' code: MIRTK/DrawEM (Apache-2.0), lehai-ml/nimagen (MIT)
Status: code verified, 86 files readable, 5 matches

Sunday, 9 April 2023 (2 papers)

[1746] doi:10.1016/j.envint.2023.107921 [paper, data]
Prenatal exposure to air pollution is associated with structural changes in the neonatal brain.
Journal: Environment international
Status: data only, 1 dataset cited
[1747] doi:10.3390/toxics11040357 [paper, data]
A Realistic Mixture of Persistent Organic Pollutants Affects Zebrafish Development, Behavior, and Specifically Eye Formation by Inhibiting the Condensin I Complex.
Journal: Toxics
Status: data only, 1 dataset cited

Saturday, 8 April 2023 (2 papers)

[1748] doi:10.1038/s41597-023-02038-w [paper, repository]
The Queensland Twin Adolescent Brain Project, a longitudinal study of adolescent brain development.
Journal: Scientific data
Authors' code: QTAB-STUDY/twin-data-models (CC0-1.0), QTAB-STUDY/pre-processing (no license), peerherholz/bidsonym (BSD-3-Clause), QTAB-STUDY/dicom-to-bids (no license), Zenodo 7430429 (CC-BY-4.0)
Status: code verified, 45 files readable, 20 matches
[1749] doi:10.3390/microorganisms11040975 [paper, data]
Maternal Psychosocial Stress Is Associated with Reduced Diversity in the Early Infant Gut Microbiome.
Journal: Microorganisms
Status: data only, 1 dataset cited

Friday, 7 April 2023 (1 paper)

[1750] doi:10.3390/ijms24086913 [paper, data]
Short-Term Exposure to Benzo(a)Pyrene Causes Disruption of GnRH Network in Zebrafish Embryos.
Journal: International journal of molecular sciences
Status: data only, 1 dataset cited

Wednesday, 5 April 2023 (1 paper)

[1751] doi:10.3389/fendo.2023.1141085 [paper, repository]
Missed meal boluses and poorer glycemic control impact on neurocognitive function may be associated with white matter integrity in adolescents with type 1 diabetes.
Journal: Frontiers in endocrinology
Authors' code: yeatmanlab/AFQ (gnu)
Status: code verified, 180 files readable, 10 matches

Tuesday, 4 April 2023 (1 paper)

[1752] doi:10.1073/pnas.2122481120 [paper, data]
Proactive or reactive? Neural oscillatory insight into the leader-follower dynamics of early infant-caregiver interaction.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited

Monday, 3 April 2023 (2 papers)

[1753] doi:10.1038/s41398-023-02401-w [paper, repository]
Parsing brain-behavior heterogeneity in very preterm born children using integrated similarity networks.
Journal: Translational psychiatry
Authors' code: lailahadaya/preterm-ExecuteSNF.CC (MIT), Zenodo 7051925 (MIT), code-neuro/ptestr (other)
Status: code verified, 26 files readable, 5 matches
[1754] doi:10.3389/fendo.2023.1140886 [paper, repository]
Perinatal exposure to the fungicide ketoconazole alters hypothalamic control of puberty in female rats.
Journal: Frontiers in endocrinology
Authors' code: alexdobin/STAR (MIT)
Status: code verified, 331 files readable

Saturday, 1 April 2023 (3 papers)

[1755] doi:10.1093/cercor/bhac373 [paper, repository]
Cortical networks show characteristic recruitment patterns after somatosensory stimulation by pneumatically evoked repetitive hand movements in newborn infants.
Journal: Cerebral cortex (New York, N.Y. : 1991)
Authors' code: ahtolee/CKC-EEG-Networks (GPL-3.0)
Status: code verified, 5 files readable, 8 matches
[1756] doi:10.1096/fj.202201564r [paper, data]
Mitigating the detrimental developmental impact of early fetal alcohol exposure using a maternal methyl donor-enriched diet.
Journal: FASEB journal : official publication of the Federation of American Societies for Experimental Biology
Status: data only, 1 dataset cited
[1757] doi:10.1186/s11689-023-09477-x [paper, repository]
No difference in extra-axial cerebrospinal fluid volumes across neurodevelopmental and psychiatric conditions in later childhood and adolescence.
Journal: Journal of neurodevelopmental disorders
Authors' code: peter3200/HBN_Project (MIT)
Status: code verified, 16 files readable, 8 matches

Friday, 31 March 2023 (1 paper)

[1758] doi:10.1002/hbm.26280 [paper, repository]
Rethinking recovery in adolescent concussions: Network-level functional connectivity alterations associated with motor deficits.
Journal: Human brain mapping
Status: code verified, 18 files readable, 3 matches

Thursday, 30 March 2023 (1 paper)

[1759] doi:10.1371/journal.pone.0256003 [paper, repository]
The temporal dynamics of the Stroop effect from childhood to young and older adulthood.
Journal: PloS one
Authors' code: EricMenetre/NPL (no license)
Status: code verified, 28 files readable, 2 matches

Wednesday, 29 March 2023 (1 paper)

[1760] doi:10.3390/brainsci13040575 [paper, repository]
EEG Dynamics of Error Processing and Associated Behavioral Adjustments in Preschool Children.
Journal: Brain sciences
Authors' code: mathigatti/Emotiv-Experiments (no license)
Status: code verified, 30 files readable

Tuesday, 28 March 2023 (1 paper)

[1761] doi:10.3389/fnhum.2023.1161156 [paper, repository]
Interhemispheric transfer time and concussion in adolescents: A longitudinal study using response time and event-related potential measures.
Journal: Frontiers in human neuroscience
Authors' code: OSF aqf9v (no license)
Status: code verified, 4 files readable, 4 matches

Monday, 27 March 2023 (1 paper)

[1762] doi:10.1101/2023.03.27.534329 [paper, data]
Axis convergence in <i>C. elegans</i> embryos
Journal: bioRxiv (preprint)
Status: data only, 2 datasets cited

Wednesday, 22 March 2023 (1 paper)

[1763] doi:10.1016/j.celrep.2023.112287 [paper, data]
Thalamic regulation of a visual critical period and motor behavior.
Journal: Cell reports
Status: data only, 1 dataset cited

Tuesday, 21 March 2023 (3 papers)

[1764] doi:10.1038/s41467-023-37015-9 [paper, repository]
Single-cell transcriptomics uncovers a non-autonomous Tbx1-dependent genetic program controlling cardiac neural crest cell development.
Journal: Nature communications
Authors' code: bioinfoDZ/RISC (GPL-3.0)
Status: code verified, 29 files readable, 1 match
[1765] doi:10.1038/s41467-023-37242-0 [paper, repository]
Characterisation of ASD traits among a cohort of children with isolated fetal ventriculomegaly.
Journal: Nature communications
Authors' code: JohnDickerson/TrackIt (GPL-2.0), SVRTK/SVRTK (Apache-2.0), mirtk/drawem (Apache-2.0)
Status: code verified, 209 files readable
[1766] doi:10.1111/infa.12540 [paper, repository]
Neural mechanisms of language development in infancy.
Journal: Infancy : the official journal of the International Society on Infant Studies
Authors' code: calculquebec.ca (no license), computecanada.ca (no license)
Status: code verified

Saturday, 18 March 2023 (1 paper)

[1767] doi:10.1007/s00018-023-04753-4 [paper, data]
Endogenous but not sensory-driven activity controls migration, morphogenesis and survival of adult-born juxtaglomerular neurons in the mouse olfactory bulb.
Journal: Cellular and molecular life sciences : CMLS
Status: code on request, 1 dataset cited

Thursday, 16 March 2023 (3 papers)

[1768] doi:10.1038/s41562-023-01542-8 [paper, repository]
Structural and functional asymmetry of the neonatal cerebral cortex.
Journal: Nature human behaviour
Status: code verified, 1,320 files readable, 11 matches
[1769] doi:10.3390/jdb11010013 [paper, data]
COMMD10 Is Essential for Neural Plate Development during Embryogenesis.
Journal: Journal of developmental biology
Status: data only, 1 dataset cited
[1770] doi:10.3389/fpsyt.2023.1143328 [paper, data]
CTNNB1 in neurodevelopmental disorders.
Journal: Frontiers in psychiatry
Status: data only, 3 datasets cited

Wednesday, 15 March 2023 (1 paper)

[1771] doi:10.1016/j.dcn.2023.101229 [paper, repository]
Adolescent neurodevelopment and psychopathology: The interplay between adversity exposure and genetic risk for accelerated brain ageing.
Journal: Developmental cognitive neuroscience
Status: code verified, 2,007 files readable

Saturday, 11 March 2023 (1 paper)

[1772] doi:10.1038/s41398-023-02387-5 [paper, repository]
The genetic architecture of human amygdala volumes and their overlap with common brain disorders.
Journal: Translational psychiatry
Authors' code: r-project.org (no license), cog-genomics.org/plink (no license), mathgen.stats.ox.ac.uk/impute/impute_v2.html (no license), imputationserver.sph.umich.edu (no license), precimed/mostest (GPL-3.0), ebi.ac.uk/gwas (no license), biit.cs.ut.ee/gprofiler/gost (no license), bulik/ldsc (GPL-3.0), lukejoconnor/LCV (no license), precimed/pleiofdr (GPL-3.0)
Status: code verified, 113 files readable, 6 matches

Friday, 10 March 2023 (1 paper)

[1773] doi:10.1002/hbm.26271 [paper, repository]
Trajectories of brain volumes in young children are associated with maternal education.
Journal: Human brain mapping
Authors' code: cran.r-project.org/package=fdapace (no license)
Status: code verified

Thursday, 9 March 2023 (3 papers)

[1774] doi:10.1038/s41593-023-01272-0 [paper, repository]
Developmental trajectory of transmission speed in the human brain.
Journal: Nature neuroscience
Status: code verified, 380 files readable, 3 matches
[1775] doi:10.1101/2023.03.07.531437 [paper, data]
Spatiotemporal mapping of the contractile and adhesive forces sculpting early <i>C. elegans</i> embryos
Journal: bioRxiv (preprint)
Status: data only, 2 datasets cited
[1776] doi:10.1016/j.dcn.2023.101228 [paper, repository]
Associations between multi-method latent factors of puberty and brain structure in adolescent girls.
Journal: Developmental cognitive neuroscience
Authors' code: Zenodo 7083177 (other-open), dsnlab/tag_puberty_w1 (no license)
Status: code verified, 26 files readable

Wednesday, 8 March 2023 (3 papers)

[1777] doi:10.1186/s12887-023-03931-4 [paper, repository]
The burden of childhood and adolescent cancers in North Africa and the Middle East (NAME) region: findings from the Global Burden of Disease study 2019.
Journal: BMC pediatrics
Authors' code: ghdx.healthdata.org/gbd-2019/code (no license)
Status: code verified
[1778] doi:10.3389/fnins.2023.1110674 [paper, data]
Improvement of semantic processing ability of Chinese characters in school children: A comparative study based on 2009 and 2019 data.
Journal: Frontiers in neuroscience
Status: data only, 1 dataset cited
[1779] doi:10.1016/j.brain.2023.100065 [paper, data]
Effects of stress-dependent growth on evolution of sulcal direction and curvature in models of cortical folding.
Journal: Brain multiphysics
Status: data only, 1 dataset cited

Tuesday, 7 March 2023 (1 paper)

[1780] doi:10.1016/j.dcn.2023.101226 [paper, repository]
Diminished reinforcement sensitivity in adolescence is associated with enhanced response switching and reduced coding of choice probability in the medial frontal pole.
Journal: Developmental cognitive neuroscience
Authors' code: OSF ptxs6 (no license)
Status: code verified

Friday, 3 March 2023 (1 paper)

[1781] doi:10.3389/fbioe.2023.1110547 [paper, repository]
Hyaluronic acid-based bioink improves the differentiation and network formation of neural progenitor cells.
Journal: Frontiers in bioengineering and biotechnology
Authors' code: Zenodo 1119026 (MIT)
Status: code verified, 949 files readable

Thursday, 2 March 2023 (1 paper)

[1782] doi:10.3390/genes14030629 [paper]
Zeb2 DNA-Binding Sites in Neuroprogenitor Cells Reveal Autoregulation and Affirm Neurodevelopmental Defects, Including in Mowat-Wilson Syndrome.
Journal: Genes
Status: data only

Wednesday, 1 March 2023 (3 papers)

[1783] doi:10.4103/1673-5374.350188 [paper, data]
Role of the histone methyltransferases Ezh2 and Suv4-20h1/Suv4-20h2 in neurogenesis.
Journal: Neural regeneration research
Status: data only, 1 dataset cited
[1784] doi:10.1002/dev.22360 [paper, repository]
Associations between the human immune system and gut microbiome with neurodevelopment in the first 5 years of life: A systematic scoping review.
Journal: Developmental psychobiology
Authors' code: OSF nk72p (no license)
Status: empty repository
[1785] doi:10.3389/fcell.2023.1073807 [paper, data]
Aberrant lipid accumulation in the mouse visceral yolk sac resulting from maternal diabetes and obesity.
Journal: Frontiers in cell and developmental biology
Status: data only, 1 dataset cited

Tuesday, 28 February 2023 (1 paper)

[1786] doi:10.1016/j.isci.2023.106277 [paper]
Administration of prosaposin-derived neurotrophic factor to neural tube defects facilitates regeneration and restores neurological functions.
Journal: iScience
Status: code on request

Monday, 27 February 2023 (1 paper)

[1787] doi:10.3389/fcell.2023.1106595 [paper, repository]
Coordinated regulation of Cdc42ep1, actin, and septin filaments during neural crest cell migration.
Journal: Frontiers in cell and developmental biology
Status: code verified, 21 files readable, 2 matches

Saturday, 25 February 2023 (2 papers)

[1788] doi:10.1007/s12035-023-03253-7 [paper, repository]
A Circular RNA Expressed from the FAT3 Locus Regulates Neural Development.
Journal: Molecular neurobiology
Authors' code: snakemake.readthedocs.io (no license), scanpy.readthedocs.io (no license)
Status: code verified
[1789] doi:10.1016/j.isci.2023.106273 [paper]
Dopey2 and Pcdh7 orchestrate the development of embryonic neural stem cells/ progenitors in zebrafish.
Journal: iScience
Status: code on request

Friday, 24 February 2023 (1 paper)

[1790] doi:10.1016/j.dcn.2023.101223 [paper, repository]
The role of brain structure in the association between pubertal timing and depression risk in an early adolescent sample (the ABCD Study®): A registered report.
Journal: Developmental cognitive neuroscience
Authors' code: niamhmacsweeney/ABCD_puberty_depression (no license)
Status: code verified, 61 files readable, 15 matches

Thursday, 23 February 2023 (1 paper)

[1791] doi:10.1038/s41598-023-29850-z [paper, repository]
Induction of primordial germ cell-like cells from common marmoset embryonic stem cells by inhibition of WNT and retinoic acid signaling.
Journal: Scientific reports
Authors' code: s-andrews/FastQC (GPL-3.0), FelixKrueger/TrimGalore (GPL-3.0)
Status: code verified, 193 files readable, 2 matches

Monday, 20 February 2023 (3 papers)

[1792] doi:10.1159/000528981 [paper, data]
Brain Biometry Reveals Impaired Brain Growth in Preterm Neonates with Intraventricular Hemorrhage.
Journal: Neonatology
Status: data only, 1 dataset cited
[1793] doi:10.1016/j.isci.2023.106242 [paper]
Bulk and mosaic deletions of <i>Egfr</i> reveal regionally defined gliogenesis in the developing mouse forebrain.
Journal: iScience
Status: code on request
[1794] doi:10.1038/s43587-023-00370-9 [paper, repository]
Chronic in vivo imaging defines age-dependent alterations of neurogenesis in the mouse hippocampus.
Journal: Nature aging
Authors' code: HelioScan/HelioScan (no license), JessbergerLab/AgingNeurogenesis_Imaging (no license)
Status: code verified, 217 files readable, 8 matches

Thursday, 16 February 2023 (1 paper)

[1795] doi:10.3389/fcell.2023.1113675 [paper, data]
Deficiency in the cell-adhesion molecule <i>dscaml1</i> impairs hypothalamic CRH neuron development and perturbs normal neuroendocrine stress axis function.
Journal: Frontiers in cell and developmental biology
Status: data only, 4 datasets cited

Wednesday, 15 February 2023 (1 paper)

[1796] doi:10.1523/eneuro.0296-21.2022 [paper, repository]
Development of the Functional Connectome Topology in Adolescence: Evidence from Topological Data Analysis.
Journal: eNeuro
Authors' code: BrainMapINB/Pubertal_TDA (GPL-3.0)
Status: code verified, 5 files readable, 2 matches

Tuesday, 14 February 2023 (3 papers)

[1797] doi:10.1186/s12916-023-02743-8 [paper, repository]
Maternal pre-pregnancy body mass index is associated with newborn offspring hypothalamic mean diffusivity: a prospective dual-cohort study.
Journal: BMC medicine
Authors' code: nda.nih.gov/edit_collection.html (no license)
Status: code verified
[1798] doi:10.1093/pnasnexus/pgac315 [paper, repository]
Sensing echoes: temporal misalignment in auditory brainstem responses as the earliest marker of neurodevelopmental derailment.
Journal: PNAS nexus
Authors' code: Zenodo 6299560 (CC-BY-4.0)
Status: code verified, 1 file readable
[1799] doi:10.3389/fnhum.2023.1076873 [paper, data]
Structural differences among children, adolescents, and adults with attention-deficit/hyperactivity disorder and abnormal Granger causality of the right pallidum and whole-brain.
Journal: Frontiers in human neuroscience
Status: data only, 2 datasets cited

Monday, 13 February 2023 (1 paper)

[1800] doi:10.1007/s12311-022-01506-0 [paper, repository]
Cerebellum Lecture: the Cerebellar Nuclei-Core of the Cerebellum.
Journal: Cerebellum (London, England)
Authors' code: justuskebschull/CNcode_final (no license)
Status: code verified, 110 files readable, 3 matches

Friday, 10 February 2023 (2 papers)

[1801] doi:10.7554/elife.83133 [paper, data]
A neuroepithelial wave of BMP signalling drives anteroposterior specification of the tuberal hypothalamus.
Journal: eLife
Status: data only, 1 dataset cited
[1802] doi:10.3389/fendo.2023.1090081 [paper, data]
Thyroid hormone action controls multiple components of cell junctions at the ventricular zone in the newborn rat brain.
Journal: Frontiers in endocrinology
Status: data only, 1 dataset cited

Monday, 6 February 2023 (2 papers)

[1803] doi:10.1016/j.dcn.2023.101211 [paper, repository]
Corpus callosum structural characteristics in very preterm children and adolescents: Developmental trajectory and relationship to cognitive functioning.
Journal: Developmental cognitive neuroscience
Authors' code: OSF h6t2k (no license)
Status: empty repository
[1804] doi:10.1016/j.dcn.2023.101209 [paper, repository]
Effects of prenatal cannabis exposure on developmental trajectory of cognitive ability and brain volumes in the adolescent brain cognitive development (ABCD) study.
Journal: Developmental cognitive neuroscience
Authors' code: OSF t7y3s (no license)
Status: code verified, 10 files readable, 7 matches

Friday, 3 February 2023 (2 papers)

[1805] doi:10.1038/s41598-023-29205-8 [paper, repository]
The effect of mindfulness-based intervention on neurobehavioural functioning and its association with white-matter microstructural changes in preterm young adolescents.
Journal: Scientific reports
Authors' code: danizoeller/myPLS (GPL-2.0)
Status: code verified, 37 files readable, 2 matches
[1806] doi:10.3389/fnins.2022.972201 [paper, data]
Large-scale organoid study suggests effects of trisomy 21 on early fetal neurodevelopment are more subtle than variability between isogenic lines and experiments.
Journal: Frontiers in neuroscience
Status: data only, 1 dataset cited

Wednesday, 1 February 2023 (3 papers)

[1807] doi:10.1093/scan/nsac053 [paper, data]
Neighborhood disadvantage, race/ethnicity and neural sensitivity to social threat and reward among adolescents.
Journal: Social cognitive and affective neuroscience
Status: data only, 1 dataset cited
[1808] doi:10.1093/scan/nsac058 [paper, repository]
Social goals in girls transitioning to adolescence: associations with psychopathology and brain network connectivity.
Journal: Social cognitive and affective neuroscience
Authors' code: cran.r-project.org/package=gimme (no license)
Status: code verified
[1809] doi:10.1093/scan/nsac062 [paper, data]
Longitudinal self-concept development in adolescence.
Journal: Social cognitive and affective neuroscience
Status: data only, 1 dataset cited

Tuesday, 31 January 2023 (1 paper)

[1810] doi:10.1016/j.isci.2023.106087 [paper, repository]
Ambient fine particulate exposure and subcortical gray matter microarchitecture in 9- and 10-year-old children across the United States.
Journal: iScience
Authors' code: figshare 21926088 (CC-BY-4.0), figshare 21926157 (CC-BY-4.0), figshare 21861894 (CC-BY-4.0)
Status: code verified, 3 files readable, 3 matches

Monday, 30 January 2023 (1 paper)

[1811] doi:10.1590/1678-4685-gmb-2022-0268 [paper, data]
Interchromosomal translocation in neural progenitor cells exposed to L1 retrotransposition.
Journal: Genetics and molecular biology
Status: data only, 1 dataset cited

Friday, 27 January 2023 (4 papers)

[1812] doi:10.1038/s41467-023-36083-1 [paper, repository]
Gold nanoparticle-enhanced X-ray microtomography of the rodent reveals region-specific cerebrospinal fluid circulation in the brain.
Journal: Nature communications
Authors' code: 4dfp.readthedocs.io (no license), hackercd/Pan_Registration (no license)
Status: code verified
[1813] doi:10.1038/s41467-023-36174-z [paper, data]
Redox-dependent Igfbp2 signaling controls Brca1 DNA damage response to govern neural stem cell fate.
Journal: Nature communications
Status: data only, 1 dataset cited
[1814] doi:10.1016/j.dcn.2023.101202 [paper, repository]
Preterm birth and neonatal white matter microstructure in in-vivo reconstructed fiber tracts among audiovisual integration brain regions.
Journal: Developmental cognitive neuroscience
Authors' code: BioMedIA/dhcp-structural-pipeline (Apache-2.0), ecr05/dHCP_template_alignment (MIT), OSF 24hcb (no license)
Status: code verified, 1,268 files readable, 20 matches
[1815] doi:10.1016/j.dcn.2023.101203 [paper, repository]
Automated and manual segmentation of the hippocampus in human infants.
Journal: Developmental cognitive neuroscience
Authors' code: ntblab/infant_neuropipe (gnu)
Status: code verified, 126 files readable, 2 matches

Wednesday, 25 January 2023 (1 paper)

[1816] doi:10.1016/j.isci.2023.106038 [paper, repository]
Developmental change in predictive motor abilities.
Journal: iScience
Authors' code: swpark7948/PredictionDevelopment (no license)
Status: code verified, 16 files readable

Tuesday, 24 January 2023 (2 papers)

[1817] doi:10.1002/hbm.26216 [paper, data]
Prenatal depressive symptoms and childhood development of brain limbic and default mode network structure.
Journal: Human brain mapping
Status: data only, 1 dataset cited
[1818] doi:10.7554/elife.78397 [paper, data]
Infant brain regional cerebral blood flow increases supporting emergence of the default-mode network.
Journal: eLife
Status: data only, 1 dataset cited

Wednesday, 18 January 2023 (1 paper)

[1819] doi:10.3389/fpsyt.2022.1046821 [paper, repository]
Gender difference in functional activity of 4-months-old infants during sleep: A functional near-infrared spectroscopy study.
Journal: Frontiers in psychiatry
Authors' code: ATQlove/GD-infants-fNIRS (no license)
Status: code verified, 7 files readable, 2 matches

Thursday, 12 January 2023 (2 papers)

[1820] doi:10.1038/s41467-022-35619-1 [paper, data]
Large-scale perfused tissues via synthetic 3D soft microfluidics.
Journal: Nature communications
Status: data only, 1 dataset cited
[1821] doi:10.3390/ijms24021505 [paper, data]
Downregulation of CDC25C in NPCs Disturbed Cortical Neurogenesis.
Journal: International journal of molecular sciences
Status: data only, 1 dataset cited

Wednesday, 11 January 2023 (1 paper)

[1822] doi:10.1002/hbm.26200 [paper, data]
Developmental and aging resting functional magnetic resonance imaging brain state adaptations in adolescents and adults: A large N (>47K) study.
Journal: Human brain mapping
Status: code on request, 1 dataset cited

Tuesday, 10 January 2023 (1 paper)

[1823] doi:10.1038/s41598-022-27275-8 [paper, repository]
Partial wavelet coherence as a robust method for assessment of neurovascular coupling in neonates with hypoxic ischemic encephalopathy.
Journal: Scientific reports
Authors' code: timhermans/pwc (no license)
Status: code verified, 6 files readable, 2 matches

Monday, 9 January 2023 (2 papers)

[1824] doi:10.3389/fnins.2022.1025492 [paper, data]
Assessing atypical brain functional connectivity development: An approach based on generative adversarial networks.
Journal: Frontiers in neuroscience
Status: data only, 1 dataset cited
[1825] doi:10.3389/fmicb.2022.1050352 [paper, data]
Surrogate fostering of mice prevents prenatal estradiol-induced insulin resistance <i>via</i> modulation of the microbiota-gut-brain axis.
Journal: Frontiers in microbiology
Status: data only, 1 dataset cited

Friday, 6 January 2023 (2 papers)

[1826] doi:10.1016/j.dcn.2023.101196 [paper, repository]
Why weight? Analytic approaches for large-scale population neuroscience data.
Journal: Developmental cognitive neuroscience
Authors' code: OSF d94kq (no license)
Status: code verified, 4 files readable, 12 matches
[1827] doi:10.3390/s23020655 [paper, data]
Deep Learning-Based Multiclass Brain Tissue Segmentation in Fetal MRIs.
Journal: Sensors (Basel, Switzerland)
Status: data only, 1 dataset cited

Thursday, 5 January 2023 (1 paper)

[1828] doi:10.1016/j.xpro.2022.101997 [paper]
Expansion microscopy of the chick embryo neural tube to overcome molecular crowding at the centrosomes-cilia.
Journal: STAR protocols
Status: code on request

Wednesday, 4 January 2023 (1 paper)

[1829] doi:10.1016/j.dcn.2022.101195 [paper]
Sex and age variations in the impact of puberty on cortical thickness and associations with internalizing symptoms and suicidal ideation in early adolescence.
Journal: Developmental cognitive neuroscience
Status: code on request

Tuesday, 3 January 2023 (1 paper)

[1830] doi:10.1038/s41398-022-02301-5 [paper, repository]
Neuroanatomical correlates of genetic risk for obesity in children.
Journal: Translational psychiatry
Authors' code: FilipMorys/OBPRS (no license)
Status: code verified, 4 files readable, 1 match

Sunday, 1 January 2023 (4 papers)

[1831] doi:10.1007/978-1-0716-2887-4_10 [paper, repository]
Live-Imaging Analysis of Epithelial Zippering During Mouse Neural Tube Closure.
Journal: Methods in molecular biology (Clifton, N.J.)
Authors' code: DaleMoulding/Fiji-Macros (MIT)
Status: empty repository, 2 files readable
[1832] doi:10.1080/19490976.2023.2178800 [paper, data]
<i>Limosilactobacillus reuteri</i> normalizes blood-brain barrier dysfunction and neurodevelopment deficits associated with prenatal exposure to lipopolysaccharide.
Journal: Gut microbes
Status: data only, 1 dataset cited
[1833] doi:10.12688/hrbopenres.13802.2 [paper, data]
Association between intrapartum fetal pulse oximetry and adverse perinatal and long-term outcomes: a systematic review and meta-analysis protocol.
Journal: HRB open research
Status: data only, 2 datasets cited
[1834] doi:10.12688/f1000research.139515.2 [paper, data]
Correlation of age with the size of subcortical nuclei of the brain and its implication in degenerative disease: A magnetic resonance imaging study.
Journal: F1000Research
Status: data only, 2 datasets cited

Wednesday, 28 December 2022 (2 papers)

[1835] doi:10.7554/elife.82088 [paper, repository]
Fiber-specific structural properties relate to reading skills in children and adolescents.
Journal: eLife
Authors' code: smeisler/Meisler_Reading_FBA (MIT), OSF 3ady4 (no license)
Status: code verified, 49 files readable, 20 matches
[1836] doi:10.1002/hbm.26183 [paper]
Systematic evaluation of head motion on resting-state functional connectivity MRI in the neonate.
Journal: Human brain mapping
Status: code on request

Tuesday, 27 December 2022 (1 paper)

[1837] doi:10.3390/ijerph20010441 [paper, data]
European Epidemiological Patterns of Cannabis- and Substance-Related Congenital Neurological Anomalies: Geospatiotemporal and Causal Inferential Study.
Journal: International journal of environmental research and public health
Status: data only, 2 datasets cited

Sunday, 25 December 2022 (1 paper)

[1838] doi:10.3390/s23010202 [paper, repository]
End-to-End Model-Based Detection of Infants with Autism Spectrum Disorder Using a Pretrained Model.
Journal: Sensors (Basel, Switzerland)
Authors' code: AiTeRLab-GIST/E2E_ASD_DETECTION (MIT)
Status: code verified, 35 files readable, 1 match

Thursday, 22 December 2022 (1 paper)

[1839] doi:10.1177/0271678x221147091 [paper, repository]
Germinal matrix hemorrhage induces immune responses, brain injury, and motor impairment in neonatal rats.
Journal: Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism
Authors' code: xiayh17/RNAseqStat (other)
Status: code verified, 52 files readable

Monday, 19 December 2022 (1 paper)

[1840] doi:10.1038/s41380-022-01918-8 [paper, repository]
Predicting childhood and adolescent attention-deficit/hyperactivity disorder onset: a nationwide deep learning approach.
Journal: Molecular psychiatry
Authors' code: kmlstyle/ADHD-DNN (no license)
Status: code verified, 3 files readable, 3 matches

Sunday, 18 December 2022 (1 paper)

[1841] doi:10.3390/cells11244118 [paper, data]
CBP and p300 Jointly Maintain Neural Progenitor Viability but Play Unique Roles in the Differentiation of Neural Lineages.
Journal: Cells
Status: data only, 1 dataset cited

Thursday, 15 December 2022 (3 papers)

[1842] doi:10.1038/s41467-022-35303-4 [paper, repository]
Nr6a1 controls Hox expression dynamics and is a master regulator of vertebrate trunk development.
Journal: Nature communications
Authors' code: jpouch/qPCR-Biomark (CC0-1.0), ACCLAB/dabestr (Apache-2.0)
Status: code verified, 54 files readable
[1843] doi:10.1016/j.stemcr.2022.11.011 [paper, repository]
What has single-cell transcriptomics taught us about long non-coding RNAs in the ventricular-subventricular zone?
Journal: Stem cell reports
Status: empty repository, 2 files readable
[1844] doi:10.3389/fendo.2022.1057566 [paper, repository]
Lower hypothalamus subunit volumes link with impaired long-term body weight gain after preterm birth.
Journal: Frontiers in endocrinology
Status: code verified

Wednesday, 14 December 2022 (3 papers)

[1845] doi:10.1002/hbm.26174 [paper, repository]
3D-MASNet: 3D mixed-scale asymmetric convolutional segmentation network for 6-month-old infant brain MR images.
Journal: Human brain mapping
Authors' code: RicardoZiTseng/3D-MASNet (Apache-2.0)
Status: code verified, 16 files readable, 2 matches
[1846] doi:10.1126/sciadv.add2185 [paper, repository]
Asymmetric signaling across the hierarchy of cytoarchitecture within the human connectome.
Journal: Science advances
Authors' code: rdgao/field-echos (no license), Zenodo 7133119 (other-open), lindenmp/nct_hierarchy (MIT), ncbi.nlm.nih.gov/projects/gap (no license), Zenodo 3672110 (other-open), dalejn/cleanbib (MIT)
Status: code verified, 137 files readable, 18 matches
[1847] doi:10.1038/s41586-022-05526-y [paper, repository]
Primate gastrulation and early organogenesis at single-cell resolution.
Journal: Nature
Authors' code: ecamacho90/BiologicalImageProcessing (GPL-3.0), Zenodo 7367663 (CC-BY-4.0)
Status: code verified, 97 files readable

Monday, 12 December 2022 (3 papers)

[1848] doi:10.1073/pnas.2212879119 [paper, repository]
Temporal changes in plasma membrane lipid content induce endocytosis to regulate developmental epithelial-to-mesenchymal transition.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: code verified, 6 files readable, 1 match
[1849] doi:10.1038/s41467-022-35322-1 [paper, repository]
Broad misappropriation of developmental splicing profile by cancer in multiple organs.
Journal: Nature communications
Authors' code: hannenhalli-lab/AltSplDevCancer (no license), Zenodo 7325464 (other-open)
Status: code verified, 50 files readable, 10 matches
[1850] doi:10.1038/s41380-022-01901-3 [paper, data]
In vivo white matter microstructure in adolescents with early-onset psychosis: a multi-site mega-analysis.
Journal: Molecular psychiatry
Status: data only, 1 dataset cited

Saturday, 10 December 2022 (1 paper)

[1851] doi:10.1016/j.neuroimage.2022.119808 [paper, repository]
The confound of head position in within-session connectome fingerprinting in infants.
Journal: NeuroImage
Authors' code: Grahamgithubking/head_position (MIT)
Status: code verified, 68 files readable, 7 matches

Friday, 9 December 2022 (1 paper)

[1852] doi:10.1016/j.isci.2022.105778 [paper]
Rapid development of motion-streak coding in the mouse visual cortex.
Journal: iScience
Status: code on request

Thursday, 8 December 2022 (4 papers)

[1853] doi:10.1242/dev.200504 [paper, repository]
Single-cell transcriptional and functional analysis of dopaminergic neurons in organoid-like cultures derived from human fetal midbrain.
Journal: Development (Cambridge, England)
Authors' code: smorabit/hdWGCNA (other)
Status: code verified, 77 files readable, 3 matches
[1854] doi:10.1002/hbm.26173 [paper, repository]
Coordinated anatomical and functional variability in the human brain during adolescence.
Journal: Human brain mapping
Authors' code: neurogazer-usa/PAFA (no license)
Status: code verified, 2 files readable
[1855] doi:10.1186/s13229-022-00526-1 [paper, repository]
Infant excitation/inhibition balance interacts with executive attention to predict autistic traits in childhood.
Journal: Molecular autism
Authors' code: OSF 2vwxy (no license)
Status: code verified, 1 file readable, 1 match
[1856] doi:10.1016/j.nicl.2022.103286 [paper, repository]
Aberrant claustrum structure in preterm-born neonates: an MRI study.
Journal: NeuroImage. Clinical
Authors' code: hongweilibran/claustrum_multi_view (no license), cor2ni/3D_brain_plot (MIT)
Status: code verified, 11 files readable

Wednesday, 7 December 2022 (1 paper)

[1857] doi:10.1016/j.isci.2022.105752 [paper]
Cortical feedback modulates distinct critical period development in mouse visual thalamus.
Journal: iScience
Status: code on request

Tuesday, 6 December 2022 (1 paper)

[1858] doi:10.15252/embr.202153801 [paper, data]
Piwil2 (Mili) sustains neurogenesis and prevents cellular senescence in the postnatal hippocampus.
Journal: EMBO reports
Status: data only, 1 dataset cited

Monday, 5 December 2022 (1 paper)

[1859] doi:10.3389/fcell.2022.1011974 [paper, data]
Cell type-specific changes in Wnt signaling and neuronal differentiation in the developing mouse cortex after prenatal alcohol exposure during neurogenesis.
Journal: Frontiers in cell and developmental biology
Status: data only, 1 dataset cited

Thursday, 1 December 2022 (4 papers)

[1860] doi:10.1093/brain/awac008 [paper, data]
Association between ultrasonography foetal anomalies and autism spectrum disorder.
Journal: Brain : a journal of neurology
Status: data only, 1 dataset cited
[1861] doi:10.1093/cercor/bhac067 [paper]
Evolution of cross-frequency coupling between endogenous oscillations over the temporal cortex in very premature neonates.
Journal: Cerebral cortex (New York, N.Y. : 1991)
Status: code on request
[1862] doi:10.7554/elife.83883 [paper, data]
Urotensin II-related peptides, Urp1 and Urp2, control zebrafish spine morphology.
Journal: eLife
Status: data only, 1 dataset cited
[1863] doi:10.3390/ijms232315064 [paper, repository]
Microbe-Immune-Stress Interactions Impact Behaviour during Postnatal Development.
Journal: International journal of molecular sciences
Status: code verified

Wednesday, 30 November 2022 (4 papers)

[1864] doi:10.1371/journal.pone.0278259 [paper, repository]
Age matters: Microbiome depletion prior to repeat mild traumatic brain injury differentially alters microbial composition and function in adolescent and adult rats.
Journal: PloS one
Status: code verified, 20 files readable, 1 match
[1865] doi:10.1007/s00702-022-02570-w [paper, data]
Embryonic mouse medial neocortex as a model system for studying the radial glial scaffold in fetal human neocortex.
Journal: Journal of neural transmission (Vienna, Austria : 1996)
Status: data only, 1 dataset cited
[1866] doi:10.1016/j.cub.2022.11.016 [paper, repository]
Visual category representations in the infant brain.
Journal: Current biology : CB
Authors' code: siyingxie/VCR_infant (BSD-3-Clause)
Status: code verified, 23 files readable, 9 matches
[1867] doi:10.3389/fnmol.2022.1069122 [paper, data]
Cystatin B deficiency results in sustained histone H3 tail cleavage in postnatal mouse brain mediated by increased chromatin-associated cathepsin L activity.
Journal: Frontiers in molecular neuroscience
Status: data only, 1 dataset cited

Saturday, 26 November 2022 (1 paper)

[1868] doi:10.1016/j.bpsgos.2022.11.003 [paper, repository]
Variability in Cognitive Task Performance in Early Adolescence Is Associated With Stronger Between-Network Anticorrelation and Future Attention Problems.
Journal: Biological psychiatry global open science
Authors' code: OSF 25za6 (no license)
Status: code verified

Thursday, 24 November 2022 (2 papers)

[1869] doi:10.1111/acer.14952 [paper, data]
Prenatal alcohol exposure exacerbates acute sensorimotor deficits and impedes long-term behavioral recovery from the effects of an adult-onset cerebrovascular ischemic stroke.
Journal: Alcoholism, clinical and experimental research
Status: data only, 1 dataset cited
[1870] doi:10.3389/fpsyt.2022.1049719 [paper, data]
Studying hemispheric lateralization of 4-month-old infants from different language groups through near-infrared spectroscopy-based connectivity.
Journal: Frontiers in psychiatry
Status: data only, 1 dataset cited

Wednesday, 23 November 2022 (2 papers)

[1871] doi:10.1186/s12915-022-01467-0 [paper, repository]
Folate regulates RNA m<sup>5</sup>C modification and translation in neural stem cells.
Journal: BMC biology
Authors' code: zaustinj33/RNABSseq_FolicAcid (no license)
Status: code verified, 30 files readable, 3 matches
[1872] doi:10.3390/e24121708 [paper, repository]
Effective Approaches to Fetal Brain Segmentation in MRI and Gestational Age Estimation by Utilizing a Multiview Deep Inception Residual Network and Radiomics.
Journal: Entropy (Basel, Switzerland)
Status: empty repository, 1 file readable

Tuesday, 22 November 2022 (1 paper)

[1873] doi:10.1038/s41467-022-33884-8 [paper, data]
Mapping the effects of pregnancy on resting state brain activity, white matter microstructure, neural metabolite concentrations and grey matter architecture.
Journal: Nature communications
Status: data only, 1 dataset cited

Monday, 21 November 2022 (2 papers)

[1874] doi:10.3389/fcell.2022.994588 [paper, data]
Tsukushi proteoglycan maintains RNA splicing and developmental signaling network in GFAP-expressing subventricular zone neural stem/progenitor cells.
Journal: Frontiers in cell and developmental biology
Status: data only, 1 dataset cited
[1875] doi:10.3389/fcell.2022.1034679 [paper, data]
Reduced <i>LYNX1</i> expression in transcriptome of human iPSC-derived neural progenitors modeling fragile X syndrome.
Journal: Frontiers in cell and developmental biology
Status: data only, 1 dataset cited

Friday, 18 November 2022 (2 papers)

[1876] doi:10.3389/fninf.2022.1032636 [paper, repository]
Alteration of brain nuclei in obese children with and without Prader-Willi syndrome.
Journal: Frontiers in neuroinformatics
Authors' code: jdiedrichsen/suit (no license)
Status: code verified, 43 files readable, 1 match
[1877] doi:10.1093/texcom/tgac041 [paper, repository]
Fetal blockade of nicotinic acetylcholine transmission causes autism-like impairment of biological motion preference in the neonatal chick.
Journal: Cerebral cortex communications
Authors' code: eprints.lib.hokudai.ac.jp/dspace/handle (no license)
Status: code verified

Thursday, 17 November 2022 (1 paper)

[1878] doi:10.1016/j.dcn.2022.101178 [paper, repository]
Can this data be saved? Techniques for high motion in resting state scans of first grade children.
Journal: Developmental cognitive neuroscience
Authors' code: Jolinda/lcni_motion_scripts (MIT)
Status: code verified, 5 files readable

Wednesday, 16 November 2022 (3 papers)

[1879] doi:10.1126/sciadv.abq2987 [paper, repository]
Hierarchical deployment of Tbx3 dictates the identity of hypothalamic KNDy neurons to control puberty onset.
Journal: Science advances
Authors' code: GradinaruLab/HCRprobe (no license), Oshlack/speckle (GPL-3.0), Zenodo 7131719 (CC-BY-4.0)
Status: code verified, 34 files readable, 7 matches
[1880] doi:10.1038/s42003-022-04225-8 [paper]
Complexity of modular neuromuscular control increases and variability decreases during human locomotor development.
Journal: Communications biology
Status: code on request
[1881] doi:10.3389/fcell.2022.1025332 [paper]
Somatic mosaicism in <i>STAG2</i>-associated cohesinopathies: Expansion of the genotypic and phenotypic spectrum.
Journal: Frontiers in cell and developmental biology
Status: data only

Tuesday, 15 November 2022 (2 papers)

[1882] doi:10.1172/jci146095 [paper, repository]
Neonatal hyperoxia in mice triggers long-term cognitive deficits via impairments in cerebrovascular function and neurogenesis.
Journal: The Journal of clinical investigation
Authors' code: chcomin/Neonatal-hyperoxia (GPL-3.0)
Status: code verified, 2 files readable
[1883] doi:10.1186/s40945-022-00151-4 [paper, repository]
Spreading the word: pediatric pain education from treatment to prevention.
Journal: Archives of physiotherapy
Authors' code: youtube.com/watch (no license)
Status: code verified

Monday, 14 November 2022 (3 papers)

[1884] doi:10.26508/lsa.202201456 [paper]
Loss of autism-candidate CHD8 perturbs neural crest development and intestinal homeostatic balance.
Journal: Life science alliance
Status: code on request
[1885] doi:10.1186/s12987-022-00387-z [paper, data]
Age dependent contribution of entry via the CSF to the overall brain entry of small and large hydrophilic markers.
Journal: Fluids and barriers of the CNS
Status: data only, 4 datasets cited
[1886] doi:10.3389/fnins.2022.981801 [paper, data]
Animal models of developmental dyslexia.
Journal: Frontiers in neuroscience
Status: data only, 2 datasets cited

Friday, 11 November 2022 (2 papers)

[1887] doi:10.1038/s41467-022-34354-x [paper, data]
Dominant ARF3 variants disrupt Golgi integrity and cause a neurodevelopmental disorder recapitulated in zebrafish.
Journal: Nature communications
Status: data only, 2 datasets cited
[1888] doi:10.1038/s41467-022-34131-w [paper, repository]
Developmental disruption and restoration of brain synaptome architecture in the murine Pax6 neurodevelopmental disease model.
Journal: Nature communications
Status: code verified, 3 files readable

Tuesday, 8 November 2022 (1 paper)

[1889] doi:10.1172/jci.insight.161214 [paper, data]
DIO3 protects against thyrotoxicosis-derived cranio-encephalic and cardiac congenital abnormalities.
Journal: JCI insight
Status: data only, 1 dataset cited

Friday, 4 November 2022 (1 paper)

[1890] doi:10.1016/j.neuron.2022.10.018 [paper, data]
CROCCP2 acts as a human-specific modifier of cilia dynamics and mTOR signaling to promote expansion of cortical progenitors.
Journal: Neuron
Status: code on request, 1 dataset cited

Thursday, 3 November 2022 (2 papers)

[1891] doi:10.1186/s12916-022-02627-3 [paper, data]
Lower gestational age is associated with lower cortical volume and cognitive and educational performance in adolescence.
Journal: BMC medicine
Status: data only, 1 dataset cited
[1892] doi:10.3390/nu14214643 [paper]
Prenatal Caffeine Exposure Is Linked to Elevated Sugar Intake and BMI, Altered Reward Sensitivity, and Aberrant Insular Thickness in Adolescents: An ABCD Investigation.
Journal: Nutrients
Status: code on request

Wednesday, 2 November 2022 (1 paper)

[1893] doi:10.1073/pnas.2206704119 [paper, repository]
Adult neurogenesis acts as a neural regularizer.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: linamnt/dnn-neurogenesis (BSD-3-Clause), facebook/Ax (MIT)
Status: code verified, 756 files readable, 3 matches

Tuesday, 1 November 2022 (4 papers)

[1894] doi:10.1093/scan/nsac025 [paper, data]
Neural connectivity underlying adolescent social learning in sibling dyads.
Journal: Social cognitive and affective neuroscience
Status: data only, 1 dataset cited
[1895] doi:10.1093/brain/awac296 [paper, repository]
Integrative genomics reveals pathogenic mediator of valproate-induced neurodevelopmental disability.
Journal: Brain : a journal of neurology
Authors' code: rahfel/VPA (no license)
Status: code verified, 5 files readable, 2 matches
[1896] doi:10.1016/j.celrep.2022.111585 [paper, data]
Spatiotemporal and genetic regulation of A-to-I editing throughout human brain development.
Journal: Cell reports
Status: data only, 1 dataset cited
[1897] doi:10.1101/gad.349930.122 [paper, repository]
Oxytocin signaling is necessary for synaptic maturation of adult-born neurons.
Journal: Genes & development
Status: code verified, 508 files readable, 5 matches

Monday, 31 October 2022 (4 papers)

[1898] doi:10.15252/embj.2022111192 [paper, data]
Maternal immune activation leads to defective brain-blood vessels and intracerebral hemorrhages in male offspring.
Journal: The EMBO journal
Status: data only, 1 dataset cited
[1899] doi:10.3390/brainsci12111480 [paper, data]
Electrophysiological Evidence for A Number-Action Mapping in Infancy.
Journal: Brain sciences
Status: data only, 1 dataset cited
[1900] doi:10.1016/j.dcn.2022.101172 [paper, repository]
Reward sensitivity and internalizing symptoms during the transition to puberty: An examination of 9-and 10-year-olds in the ABCD Study.
Journal: Developmental cognitive neuroscience
Authors' code: OSF 3yrwh (no license), nsaragosaharris/abcd_transitiontopuberty_study (no license)
Status: code verified, 19 files readable, 10 matches
[1901] doi:10.1016/j.dcn.2022.101171 [paper, repository]
Longitudinal developmental trajectories of inhibition and white-matter maturation of the fronto-basal-ganglia circuits.
Journal: Developmental cognitive neuroscience
Status: code verified, 47 files readable, 9 matches

Thursday, 27 October 2022 (1 paper)

[1902] doi:10.1097/j.pain.0000000000002798 [paper, repository]
Clinical thresholds in pain-related facial activity linked to differences in cortical network activation in neonates.
Journal: Pain
Authors' code: figshare 20331591 (CC-BY-4.0), figshare 20749837 (CC-BY-4.0)
Status: empty repository

Wednesday, 26 October 2022 (1 paper)

[1903] doi:10.1016/j.neuroimage.2022.119712 [paper, repository]
Spatially-enhanced clusterwise inference for testing and localizing intermodal correspondence.
Journal: NeuroImage
Authors' code: junjypark/CLEAN (MIT)
Status: code verified, 23 files readable

Monday, 24 October 2022 (1 paper)

[1904] doi:10.1172/jci.insight.157714 [paper, data]
Early-life low-calorie sweetener consumption disrupts glucose regulation, sugar-motivated behavior, and memory function in rats.
Journal: JCI insight
Status: data only, 1 dataset cited

Sunday, 23 October 2022 (1 paper)

[1905] doi:10.1186/s12864-022-08953-3 [paper, data]
Quantitative analysis of transcriptome dynamics provides novel insights into developmental state transitions.
Journal: BMC genomics
Status: data only, 4 datasets cited

Saturday, 22 October 2022 (1 paper)

[1906] doi:10.1177/13623613221127512 [paper, repository]
Anxiety in children and youth with autism spectrum disorder and the association with amygdala subnuclei structure.
Journal: Autism : the international journal of research and practice
Status: code verified, 4 files readable

Thursday, 20 October 2022 (1 paper)

[1907] doi:10.1016/j.ynirp.2022.100142 [paper, repository]
Empathy and resting-state functional connectivity in children.
Journal: Neuroimage. Reports
Authors' code: HALFpipe/HALFpipe (GPL-3.0)
Status: code verified, 462 files readable, 5 matches

Wednesday, 19 October 2022 (1 paper)

[1908] doi:10.1038/s41598-022-17780-1 [paper, data]
Intrinsic connectivity within the affective salience network moderates adolescent susceptibility to negative and positive peer norms.
Journal: Scientific reports
Status: data only, 1 dataset cited

Monday, 17 October 2022 (1 paper)

[1909] doi:10.1016/j.dcn.2022.101164 [paper, repository]
Socioeconomic resources are associated with distributed alterations of the brain's intrinsic functional architecture in youth.
Journal: Developmental cognitive neuroscience
Status: code verified, 17 files readable, 7 matches

Saturday, 15 October 2022 (1 paper)

[1910] doi:10.1186/s13064-022-00166-4 [paper, data]
mRNAs encoding neurodevelopmental regulators have equal N6-methyladenosine stoichiometry in Drosophila neuroblasts and neurons.
Journal: Neural development
Status: data only, 2 datasets cited

Friday, 14 October 2022 (2 papers)

[1911] doi:10.7554/elife.78847 [paper, repository]
Dynamic proteomic and phosphoproteomic atlas of corticostriatal axons in neurodevelopment.
Journal: eLife
Authors' code: KozorovitskiyLaboratory/STRaxon (no license), saezlab/PHONEMeS-ILP (GPL-3.0)
Status: code verified, 114 files readable, 22 matches
[1912] doi:10.3389/fcell.2022.1023279 [paper]
Silk scaffolding drives self-assembly of functional and mature human brain organoids.
Journal: Frontiers in cell and developmental biology
Status: data only

Thursday, 13 October 2022 (2 papers)

[1913] doi:10.3390/ijms232012242 [paper]
Dietary Selenomethionine Reduce Mercury Tissue Levels and Modulate Methylmercury Induced Proteomic and Transcriptomic Alterations in Hippocampi of Adolescent BALB/c Mice.
Journal: International journal of molecular sciences
Status: data only
[1914] doi:10.1016/j.isci.2022.105332 [paper]
Developmental regulation of thalamus-driven pauses in striatal cholinergic interneurons.
Journal: iScience
Status: code on request

Wednesday, 12 October 2022 (1 paper)

[1915] doi:10.1038/s41586-022-05277-w [paper, repository]
Maturation and circuit integration of transplanted human cortical organoids.
Journal: Nature
Authors' code: kkelley85/Transplant_organoid_snRNAseq (no license)
Status: code verified, 12 files readable, 9 matches

Tuesday, 11 October 2022 (1 paper)

[1916] doi:10.1073/pnas.2204135119 [paper, data]
Prenatal exposure to maternal social disadvantage and psychosocial stress and neonatal white matter connectivity at birth.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited

Monday, 10 October 2022 (1 paper)

[1917] doi:10.1073/pnas.2207293119 [paper, data]
Language and developmental plasticity after perinatal stroke.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited

Friday, 7 October 2022 (1 paper)

[1918] doi:10.1016/j.xpro.2022.101753 [paper, data]
Optimized protocol for obtaining and characterizing primary neuron-enriched cultures from embryonic chicken brains.
Journal: STAR protocols
Status: data only, 1 dataset cited

Thursday, 6 October 2022 (2 papers)

[1919] doi:10.1038/s41598-022-20588-8 [paper, repository]
Test-retest reliability of upper limb robotic exoskeleton assessments in children and youths with brain lesions.
Journal: Scientific reports
Authors' code: figshare 9741221 (MIT)
Status: code verified, 27 files readable, 4 matches
[1920] doi:10.3389/fpsyt.2022.955871 [paper]
Adverse childhood experiences and fronto-subcortical structures in the developing brain.
Journal: Frontiers in psychiatry
Status: code on request

Monday, 3 October 2022 (1 paper)

[1921] doi:10.3389/fphys.2022.1023528 [paper, data]
Discontinuities in understanding follicular development, the ovulatory cycle and the oviposition cycles in the hen: Advances, opportunities, slow downs and complete stops.
Journal: Frontiers in physiology
Status: data only, 9 datasets cited

Thursday, 29 September 2022 (3 papers)

[1922] doi:10.1038/s41598-022-20068-z [paper]
Spontaneous activity in whisker-innervating region of neonatal mouse trigeminal ganglion.
Journal: Scientific reports
Status: code on request
[1923] doi:10.1002/hbm.26079 [paper, repository]
White matter microstructure shows sex differences in late childhood: Evidence from 6797 children.
Journal: Human brain mapping
Authors' code: nitrc.org/projects/abcd_study (no license)
Status: code verified
[1924] doi:10.3390/s22197426 [paper]
Characterization of Infants' General Movements Using a Commercial RGB-Depth Sensor and a Deep Neural Network Tracking Processing Tool: An Exploratory Study.
Journal: Sensors (Basel, Switzerland)
Status: code on request

Wednesday, 28 September 2022 (3 papers)

[1925] doi:10.7554/elife.78300 [paper, repository]
A dynamic and expandable digital 3D-atlas maker for monitoring the temporal changes in tissue growth during hindbrain morphogenesis.
Journal: eLife
Authors' code: cristinapujades/Blanc-et-al.-2022 (no license)
Status: code verified, 3 files readable
[1926] doi:10.1126/sciadv.abo3991 [paper, repository]
Sex-specific epigenetic development in the mouse hypothalamic arcuate nucleus pinpoints human genomic regions associated with body mass index.
Journal: Science advances
Authors' code: bulik/ldsc (GPL-3.0), Zenodo 6517177 (CC-BY-4.0)
Status: code verified, 134 files readable, 10 matches
[1927] doi:10.3389/fninf.2022.1006532 [paper, repository]
Accurate segmentation of neonatal brain MRI with deep learning.
Journal: Frontiers in neuroinformatics
Authors' code: richterleo/Neonatal_Brain_Segmentation (no license)
Status: code verified, 15 files readable, 9 matches

Tuesday, 27 September 2022 (1 paper)

[1928] doi:10.3389/fcell.2022.952832 [paper]
Hyperactivation of mTORC1 in a double hit mutant zebrafish model of tuberous sclerosis complex causes increased seizure susceptibility and neurodevelopmental abnormalities.
Journal: Frontiers in cell and developmental biology
Status: data only

Monday, 26 September 2022 (2 papers)

[1929] doi:10.7554/elife.74263 [paper, data]
Early anteroposterior regionalisation of human neural crest is shaped by a pro-mesodermal factor.
Journal: eLife
Status: data only, 1 dataset cited
[1930] doi:10.1016/j.isci.2022.105216 [paper, repository]
Zebrafish neuromesodermal progenitors undergo a critical state transition <i>in vivo</i>.
Journal: iScience
Authors' code: Zenodo 7053174 (other-open), dillansaunders/zebreg (no license)
Status: code verified, 46 files readable, 7 matches

Saturday, 24 September 2022 (1 paper)

[1931] doi:10.3390/cells11192978 [paper, data]
cATR Tracing Approach to Identify Individual Intermediary Neurons Based on Their Input and Output: A Proof-of-Concept Study Connecting Cerebellum and Central Hubs Implicated in Developmental Disorders.
Journal: Cells
Status: data only, 2 datasets cited

Thursday, 22 September 2022 (2 papers)

[1932] doi:10.1172/jci.insight.162101 [paper, repository]
Fetal maturation revealed by amniotic fluid cell-free transcriptome in rhesus macaques.
Journal: JCI insight
Authors' code: danschnell/ds_bioinformatics (no license)
Status: empty repository, 1 file readable
[1933] doi:10.1038/s41598-022-19389-w [paper, repository]
Characteristics of children of the Microcephaly Epidemic Research Group Pediatric Cohort who developed postnatal microcephaly.
Journal: Scientific reports
Authors' code: cnpq.br (no license)
Status: code verified

Wednesday, 21 September 2022 (1 paper)

[1934] doi:10.1186/s12974-022-02591-y [paper, data]
Nicotinamide reverses deficits in puberty-born neurons and cognitive function after maternal separation.
Journal: Journal of neuroinflammation
Status: data only, 1 dataset cited

Tuesday, 20 September 2022 (1 paper)

[1935] doi:10.1002/dneu.22899 [paper, data]
The cortical hem lacks stem cell potential despite expressing SOX9 and HOPX.
Journal: Developmental neurobiology
Status: data only, 1 dataset cited

Sunday, 18 September 2022 (1 paper)

[1936] doi:10.1016/j.ynirp.2022.100133 [paper, repository]
Mediating effect of pubertal stages on the family environment and neurodevelopment: An open-data replication and multiverse analysis of an ABCD Study&lt;sup&gt;®&lt;/sup&gt;.
Journal: Neuroimage. Reports
Authors' code: Zenodo 6819653 (other-open), demidenm/abcd_envbrainpubert_replicateextend (no license)
Status: code verified, 18 files readable, 17 matches

Saturday, 17 September 2022 (1 paper)

[1937] doi:10.1007/s00429-022-02565-z [paper, repository]
A comparative study of the superior longitudinal fasciculus subdivisions between neonates and young adults.
Journal: Brain structure & function
Authors' code: data.mendeley.com/datasets/5yymds8v5b (no license)
Status: code verified

Friday, 16 September 2022 (1 paper)

[1938] doi:10.3390/nu14183820 [paper]
Associations of Human Milk Oligosaccharides with Infant Brain Tissue Organization and Regional Blood Flow at 1 Month of Age.
Journal: Nutrients
Status: code on request

Tuesday, 13 September 2022 (1 paper)

[1939] doi:10.3389/fgene.2022.993387 [paper, data]
Methylmercury-induced DNA methylation-From epidemiological observations to experimental evidence.
Journal: Frontiers in genetics
Status: data only, 1 dataset cited

Thursday, 1 September 2022 (2 papers)

[1940] doi:10.1093/scan/nsac009 [paper, data]
Toddler-mother attachment moderates adolescents' behavioral and neural evaluation of trustworthiness.
Journal: Social cognitive and affective neuroscience
Status: data only, 1 dataset cited
[1941] doi:10.1016/j.xpro.2022.101533 [paper]
Robust neuronal differentiation of human embryonic stem cells for neurotoxicology.
Journal: STAR protocols
Status: code on request

Wednesday, 31 August 2022 (1 paper)

[1942] doi:10.1016/j.dcn.2022.101149 [paper, repository]
Constraints on infants' ability to extract non-adjacent dependencies from vowels and consonants.
Journal: Developmental cognitive neuroscience
Authors' code: OSF 6t2zu (no license)
Status: code found, still to be checked

Tuesday, 30 August 2022 (2 papers)

[1943] doi:10.1016/j.ajhg.2022.08.008 [paper, repository]
Bi-allelic loss-of-function variants in TMEM147 cause moderate to profound intellectual disability with facial dysmorphism and pseudo-Pelger-Huët anomaly.
Journal: American journal of human genetics
Authors' code: johnwmillr/Facer (MIT)
Status: code verified, 8 files readable
[1944] doi:10.3390/v14091923 [paper, repository]
Cortical Auditory Evoked Potentials in Children with Prenatal Exposure to Zika Virus.
Journal: Viruses
Authors' code: cnpq.br (no license)
Status: code verified

Thursday, 25 August 2022 (2 papers)

[1945] doi:10.7554/elife.77571 [paper, repository]
Decomposing the role of alpha oscillations during brain maturation.
Journal: eLife
Authors' code: OSF 4nzyk (no license), sdziem/DTIPreprocesingPipeline (no license)
Status: code verified, 30 files readable, 9 matches
[1946] doi:10.1038/s41586-022-05246-3 [paper, repository]
Embryo model completes gastrulation to neurulation and organogenesis.
Journal: Nature
Authors' code: swolock/scrublet (MIT), theislab/scanpy (BSD-3-Clause), cole-trapnell-lab.github.io/monocle3 (no license), satijalab/seurat (other), fhlab/scRNAseq_inducedETX (no license), ChengxiangQiu/ETiX_Amadei (no license)
Status: code verified, 268 files readable, 8 matches

Wednesday, 24 August 2022 (2 papers)

[1947] doi:10.1186/s13064-022-00164-6 [paper, repository]
A single-cell transcriptomic atlas of complete insect nervous systems across multiple life stages.
Journal: Neural development
Authors' code: histonemark/Brainseq_code (no license)
Status: empty repository, 1 file readable
[1948] doi:10.1016/j.bpsgos.2022.08.003 [paper, repository]
Schizophrenia Polygenic Risk During Typical Development Reflects Multiscale Cortical Organization.
Journal: Biological psychiatry global open science
Authors' code: caseypaquola/DMN (MIT), ThomasYeoLab/CBIG (MIT)
Status: code verified, 2,021 files readable

Tuesday, 23 August 2022 (1 paper)

[1949] doi:10.1109/jtehm.2022.3201167 [paper, repository]
Ensemble Learning Using Individual Neonatal Data for Seizure Detection.
Journal: IEEE journal of translational engineering in health and medicine
Authors' code: anaborovac (no license)
Status: code verified

Friday, 19 August 2022 (3 papers)

[1950] doi:10.3390/metabo12080764 [paper, data]
Impact of Maternal Obesity on the Gestational Metabolome and Infant Metabolome, Brain, and Behavioral Development in Rhesus Macaques.
Journal: Metabolites
Status: data only, 1 dataset cited
[1951] doi:10.1016/j.dcn.2022.101148 [paper, repository]
Somatosensory prediction in the premature neonate brain.
Journal: Developmental cognitive neuroscience
Authors' code: gitlab.ecole.ensicaen.fr/rclouard/tiserva (no license)
Status: code found, still to be checked
[1952] doi:10.1021/acsomega.2c04188 [paper, data]
Deciphering the Heterogeneity of the Internal Environment of Hippocampal Neurons during Maturation by Raman Spectroscopy.
Journal: ACS omega
Status: data only, 1 dataset cited

Thursday, 18 August 2022 (4 papers)

[1953] doi:10.1186/s12989-022-00497-4 [paper, data]
Chronic maternal exposure to titanium dioxide nanoparticles alters breathing in newborn offspring.
Journal: Particle and fibre toxicology
Status: data only, 2 datasets cited
[1954] doi:10.1016/j.xpro.2022.101628 [paper, data]
Derivation and culturing of neural stem cells from human embryonic brain tissue.
Journal: STAR protocols
Status: data only, 1 dataset cited
[1955] doi:10.3389/fncel.2022.962106 [paper, repository]
Profiling mouse cochlear cell maturation using 10× Genomics single-cell transcriptomics.
Journal: Frontiers in cellular neuroscience
Authors' code: satijalab/seurat (other), YuLab-SMU/clusterProfiler (no license)
Status: code verified, 227 files readable, 2 matches
[1956] doi:10.1016/j.isci.2022.104984 [paper]
Binocular visual experience drives the maturation of response variability and reliability in the visual cortex.
Journal: iScience
Status: code on request

Wednesday, 17 August 2022 (1 paper)

[1957] doi:10.7554/elife.78811 [paper, repository]
An increase of inhibition drives the developmental decorrelation of neural activity.
Journal: eLife
Status: empty repository, 4 files readable

Monday, 15 August 2022 (2 papers)

[1958] doi:10.1038/s41467-022-32462-2 [paper, data]
Sirt2 promotes white matter oligodendrogenesis during development and in models of neonatal hypoxia.
Journal: Nature communications
Status: data only, 1 dataset cited
[1959] doi:10.3389/fnut.2022.945052 [paper, data]
Milk fat globule membrane supplementation to obese rats during pregnancy and lactation promotes neurodevelopment in offspring <i>via</i> modulating gut microbiota.
Journal: Frontiers in nutrition
Status: data only, 1 dataset cited

Thursday, 11 August 2022 (1 paper)

[1960] doi:10.1016/j.dcn.2022.101144 [paper, repository]
The ABCD stop signal data: Response to Bissett et al.
Journal: Developmental cognitive neuroscience
Authors' code: sahahn/SST_Response (no license), ABCD-STUDY (no license)
Status: code verified, 8 files readable, 2 matches

Wednesday, 10 August 2022 (2 papers)

[1961] doi:10.1098/rspb.2022.0878 [paper, data]
Auditory brainstem development of naked mole-rats (&lt;i&gt;Heterocephalus glaber&lt;/i&gt;).
Journal: Proceedings. Biological sciences
Status: data only, 1 dataset cited
[1962] doi:10.1126/sciadv.abn1441 [paper, data]
Co-option of the piRNA pathway to regulate neural crest specification.
Journal: Science advances
Status: data only, 2 datasets cited

Monday, 8 August 2022 (1 paper)

[1963] doi:10.1172/jci.insight.147700 [paper, data]
Age-associated gut microbiota impair hippocampus-dependent memory in a vagus-dependent manner.
Journal: JCI insight
Status: data only, 3 datasets cited

Saturday, 6 August 2022 (1 paper)

[1964] doi:10.1007/s00429-022-02539-1 [paper, repository]
Presence or absence of a prefrontal sulcus is linked to reasoning performance during child development.
Journal: Brain structure & function
Authors' code: cnl-berkeley/stable_projects (no license)
Status: code verified, 130 files readable, 13 matches

Friday, 5 August 2022 (4 papers)

[1965] doi:10.7554/elife.76836 [paper, repository]
Stereotyped behavioral maturation and rhythmic quiescence in <i>C. elegans</i> embryos.
Journal: eLife
Authors' code: lauziere/MHHT (no license)
Status: code verified, 11 files readable
[1966] doi:10.1073/pnas.2116956119 [paper, data]
Postmitotic accumulation of histone variant H3.3 in new cortical neurons establishes neuronal chromatin, transcriptome, and identity.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited
[1967] doi:10.1038/s41467-022-32230-2 [paper, repository]
Pregnancy-induced maternal microchimerism shapes neurodevelopment and behavior in mice.
Journal: Nature communications
Authors' code: OpatzLab/HanganuOpatzToolbox (GPL-3.0)
Status: code verified, 596 files readable, 6 matches
[1968] doi:10.1016/j.dcn.2022.101145 [paper, data]
Developmental trajectories of cortical thickness by functional brain network: The roles of pubertal timing and socioeconomic status.
Journal: Developmental cognitive neuroscience
Status: data only, 1 dataset cited

Wednesday, 3 August 2022 (1 paper)

[1969] doi:10.1186/s11689-022-09454-w [paper]
A framework for characterizing heterogeneity in neurodevelopmental data using latent profile analysis in a sample of children with ADHD.
Journal: Journal of neurodevelopmental disorders
Status: code on request

Monday, 1 August 2022 (1 paper)

[1970] doi:10.1038/s41593-022-01123-4 [paper, repository]
Temporally divergent regulatory mechanisms govern neuronal diversification and maturation in the mouse and marmoset neocortex.
Journal: Nature neuroscience
Authors' code: bxlab/bx-python (MIT), bioconductor.org/packages/release (no license)
Status: code verified, 241 files readable, 1 match

Wednesday, 27 July 2022 (1 paper)

[1971] doi:10.1002/hbm.26034 [paper, repository]
Educational attainment polygenic scores, socioeconomic factors, and cortical structure in children and adolescents.
Journal: Human brain mapping
Authors' code: hub.docker.com/r/eauforest (no license)
Status: code verified

Tuesday, 26 July 2022 (4 papers)

[1972] doi:10.1073/pnas.2116974119 [paper, data]
Dynamic regulation and requirement for ribosomal RNA transcription during mammalian development.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Status: data only, 1 dataset cited
[1973] doi:10.1503/jpn.210198 [paper, data]
Effects of prenatal alcohol exposure on neurobehavioural development and volume of rostral cingulate cortex subregions.
Journal: Journal of psychiatry & neuroscience : JPN
Status: data only, 1 dataset cited
[1974] doi:10.1186/s13293-022-00448-w [paper, data]
Sex differences in the human brain: a roadmap for more careful analysis and interpretation of a biological reality.
Journal: Biology of sex differences
Status: data only, 2 datasets cited
[1975] doi:10.3390/cells11152299 [paper, data]
Vertebrate Cell Differentiation, Evolution, and Diseases: The Vertebrate-Specific Developmental Potential Guardians <i>VENTX</i>/<i>NANOG</i> and <i>POU5</i>/<i>OCT4</i> Enter the Stage.
Journal: Cells
Status: data only, 1 dataset cited

Friday, 22 July 2022 (1 paper)

[1976] doi:10.3389/fendo.2022.903058 [paper, repository]
Inter-Network Brain Functional Connectivity in Adolescents Assigned Female at Birth Who Experience Gender Dysphoria.
Journal: Frontiers in endocrinology
Authors' code: iit-land/adir_subtyping (no license), borealisdata.ca/dataset.xhtml (no license)
Status: code verified, 322 files readable, 6 matches

Thursday, 21 July 2022 (2 papers)

[1977] doi:10.1038/s41467-022-31752-z [paper, data]
Heterogeneous nuclear ribonucleoprotein U (HNRNPU) safeguards the developing mouse cortex.
Journal: Nature communications
Status: data only, 1 dataset cited
[1978] doi:10.1038/s41598-022-16691-5 [paper, data]
Neural specialization to human faces at the age of 7 months.
Journal: Scientific reports
Status: data only, 1 dataset cited

Wednesday, 20 July 2022 (4 papers)

[1979] doi:10.7554/elife.78116 [paper, repository]
The rapid developmental rise of somatic inhibition disengages hippocampal dynamics from self-motion.
Journal: eLife
Status: code verified, 142 files readable, 3 matches
[1980] doi:10.1371/journal.pone.0271334 [paper, data]
"Where am I?" A snapshot of the developmental topographical disorientation among young Italian adults.
Journal: PloS one
Status: data only, 1 dataset cited
[1981] doi:10.1038/s41467-022-31793-4 [paper, data]
An epigenome atlas of neural progenitors within the embryonic mouse forebrain.
Journal: Nature communications
Status: data only, 1 dataset cited
[1982] doi:10.1038/s41398-022-02065-y [paper, repository]
Maternal immune activation and adolescent alcohol exposure increase alcohol drinking and disrupt cortical-striatal-hippocampal oscillations in adult offspring.
Journal: Translational psychiatry
Authors' code: lucasdwi/code (no license)
Status: dead link

Tuesday, 19 July 2022 (3 papers)

[1983] doi:10.1038/s41467-022-31408-y [paper, repository]
A brain precursor atlas reveals the acquisition of developmental-like states in adult cerebral tumours.
Journal: Nature communications
Status: code verified, 26 files readable, 13 matches
[1984] doi:10.3390/ijms23147964 [paper, data]
Bridging between Mouse and Human Enhancer-Promoter Long-Range Interactions in Neural Stem Cells, to Understand Enhancer Function in Neurodevelopmental Disease.
Journal: International journal of molecular sciences
Status: data only, 4 datasets cited
[1985] doi:10.3389/fgene.2022.836853 [paper, data]
Paternal De Novo Variant of &lt;i&gt;TAOK1&lt;/i&gt; in a Fetus With Structural Brain Abnormalities.
Journal: Frontiers in genetics
Status: data only, 1 dataset cited

Friday, 15 July 2022 (2 papers)

[1986] doi:10.3389/fnins.2022.841145 [paper, data]
Identification of cortical interneuron cell markers in mouse embryos based on machine learning analysis of single-cell transcriptomics.
Journal: Frontiers in neuroscience
Status: data only, 1 dataset cited
[1987] doi:10.1016/j.biopsych.2022.06.033 [paper, repository]
Single-Nuclei RNA Sequencing of 5 Regions of the Human Prenatal Brain Implicates Developing Neuron Populations in Genetic Risk for Schizophrenia.
Journal: Biological psychiatry
Authors' code: neurogenomics/MAGMA_Celltyping (no license)
Status: code verified, 159 files readable, 2 matches

Thursday, 14 July 2022 (3 papers)

[1988] doi:10.1016/j.neuroimage.2022.119485 [paper, data]
Proportional intracranial volume correction differentially biases behavioral predictions across neuroanatomical features, sexes, and development.
Journal: NeuroImage
Status: data only, 2 datasets cited
[1989] doi:10.3390/jdb10030030 [paper, data]
Acetaminophen Disrupts the Development of Pharyngeal Arch-Derived Cartilage and Muscle in Zebrafish.
Journal: Journal of developmental biology
Status: data only, 15 datasets cited
[1990] doi:10.3389/fpsyt.2022.950455 [paper, data]
Is Brain-Derived Neurotropic Factor Methylation Involved in the Association Between Prenatal Stress and Maternal Postnatal Anxiety During the COVID-19 Pandemic?
Journal: Frontiers in psychiatry
Status: data only, 2 datasets cited

Wednesday, 13 July 2022 (1 paper)

[1991] doi:10.1111/jfb.15142 [paper, data]
Social isolation affects intra-specific interaction behaviour and reduces the size of the cerebellar brain region in juvenile Atlantic salmon Salmo salar.
Journal: Journal of fish biology
Status: data only, 1 dataset cited

Tuesday, 12 July 2022 (4 papers)

[1992] doi:10.1016/j.ajhg.2022.06.008 [paper, repository]
Bi-allelic loss-of-function variants in PPFIBP1 cause a neurodevelopmental disorder with microcephaly, epilepsy, and periventricular calcifications.
Journal: American journal of human genetics
Authors' code: Tierpsy (no license), Tom-OBrien/Phenotyping-hlb1-disease-model-mutant (no license)
Status: code verified, 8 files readable, 1 match
[1993] doi:10.7717/peerj.13734 [paper, data]
Automated detection and removal of flat line segments and large amplitude fluctuations in neonatal electroencephalography.
Journal: PeerJ
Status: data only, 1 dataset cited
[1994] doi:10.1016/j.dcn.2022.101134 [paper, repository]
Spatiotemporal dynamics of EEG microstates in four- to eight-year-old children: Age- and sex-related effects.
Journal: Developmental cognitive neuroscience
Authors' code: DEEDLabEEG (no license)
Status: code verified
[1995] doi:10.3389/fphar.2022.919630 [paper, data]
Pharmacokinetics of Cannabis and Its Derivatives in Animals and Humans During Pregnancy and Breastfeeding.
Journal: Frontiers in pharmacology
Status: data only, 2 datasets cited

Monday, 11 July 2022 (2 papers)

[1996] doi:10.15252/embj.2021108780 [paper, repository]
Schwann cell precursors represent a neural crest-like state with biased multipotency.
Journal: The EMBO journal
Authors' code: LouisFaure/glialfates_paper (no license)
Status: code verified, 7 files readable, 3 matches
[1997] doi:10.7554/elife.68035 [paper, repository]
The human amniotic epithelium confers a bias to differentiate toward the neuroectoderm lineage in human embryonic stem cells.
Journal: eLife
Authors' code: MaayanLab/biojupies (CC-BY-NC-SA-4.0)
Status: code verified, 45 files readable, 2 matches

Friday, 8 July 2022 (1 paper)

[1998] doi:10.12688/wellcomeopenres.17965.1 [paper, data]
Comparative analysis of potential broad-spectrum neuronal Cre drivers.
Journal: Wellcome open research
Status: data only, 1 dataset cited

Wednesday, 6 July 2022 (2 papers)

[1999] doi:10.1038/s41467-022-31212-8 [paper, repository]
Nuclear speed and cycle length co-vary with local density during syncytial blastoderm formation in a cricket.
Journal: Nature communications
Authors' code: Zenodo 6564745 (other-open)
Status: code verified, 4 files readable
[2000] doi:10.3390/diagnostics12071644 [paper, repository]
Reduced Cerebellar Volume in Term Infants with Complex Congenital Heart Disease: Correlation with Postnatal Growth Measurements.
Journal: Diagnostics (Basel, Switzerland)
Authors' code: PIRCImagingTools/NeBSS (BSD-3-Clause)
Status: code verified, 22 files readable, 2 matches

Tuesday, 5 July 2022 (2 papers)

[2001] doi:10.7554/elife.69430 [paper, repository]
Developmental changes in story-evoked responses in the neocortex and hippocampus.
Journal: eLife
Authors' code: samsydco/HBN (MIT)
Status: code verified, 30 files readable, 6 matches
[2002] doi:10.1186/s13229-022-00504-7 [paper, repository]
The longitudinal bidirectional relationship between autistic traits and brain morphology from childhood to adolescence: a population-based cohort study.
Journal: Molecular autism
Authors' code: tjhwhite/Gen_R_ASD_CLPM (CC0-1.0)
Status: code verified, 5 files readable, 1 match

Monday, 4 July 2022 (1 paper)

[2003] doi:10.1016/j.dcn.2022.101132 [paper, repository]
Parental socioeconomic status is linked to cortical microstructure and language abilities in children and adolescents.
Journal: Developmental cognitive neuroscience
Authors' code: OSF szqru (no license)
Status: code verified

Friday, 1 July 2022 (8 papers)

[2004] doi:10.1093/cercor/bhab415 [paper, repository]
Functional connectivity for the language network in the developing brain: 30 weeks of gestation to 30 months of age.
Journal: Cerebral cortex (New York, N.Y. : 1991)
Authors' code: bioimagesuiteweb.github.io/webapp (no license)
Status: code verified
[2005] doi:10.1093/scan/nsab132 [paper, data]
Neural representation of the parent-child attachment from infancy to adulthood.
Journal: Social cognitive and affective neuroscience
Status: data only, 1 dataset cited
[2006] doi:10.1093/cercor/bhab403 [paper, repository]
The ABCD Study: Brain Heterogeneity in Intelligence During a Neurodevelopmental Transition Stage.
Journal: Cerebral cortex (New York, N.Y. : 1991)
Authors' code: q1zhao/dglmThicknessIQ (no license)
Status: code verified, 87 files readable
[2007] doi:10.1073/pnas.2116673119 [paper, repository]
Adolescent development of multiscale structural wiring and functional interactions in the human connectome.
Journal: Proceedings of the National Academy of Sciences of the United States of America
Authors' code: mica-mni/micaopen (GPL-3.0), MICA-MNI/BrainSpace (BSD-3-Clause), Zenodo 3688800 (BSD-3-Clause)
Status: code verified, 552 files readable, 8 matches
[2008] doi:10.1038/s42003-022-03614-3 [paper, data]
Functional cargos of exosomes derived from Flk-1&lt;sup&gt;+&lt;/sup&gt; vascular progenitors enable neurulation and ameliorate embryonic anomalies in diabetic pregnancy.
Journal: Communications biology
Status: data only, 1 dataset cited
[2009] doi:10.1117/1.jbo.27.8.083004 [paper]
Age-related changes in diffuse optical tomography sensitivity profiles from childhood to adulthood.
Journal: Journal of biomedical optics
Status: code on request
[2010] doi:10.14814/phy2.15368 [paper, repository]
Cholestasis alters brain lipid and bile acid composition and compromises motor function in neonatal piglets.
Journal: Physiological reports
Authors' code: Comparative-Pediatrics-and-Nutrition (no license)
Status: code verified
[2011] doi:10.1162/netn_a_00254 [paper, repository]
Empirical evaluation of human fetal fMRI preprocessing steps.
Journal: Network neuroscience (Cambridge, Mass.)
Authors' code: ndar.nih.gov (no license)
Status: code found, still to be checked

Thursday, 30 June 2022 (2 papers)

[2012] doi:10.3389/fpsyg.2022.905762 [paper, data]
Explicit Instructions Do Not Enhance Auditory Statistical Learning in Children With Developmental Language Disorder: Evidence From Event-Related Potentials.
Journal: Frontiers in psychology
Status: data only, 1 dataset cited
[2013] doi:10.1016/j.isci.2022.104686 [paper]
Single-nucleus chromatin accessibility and RNA sequencing reveal impaired brain development in prenatally e-cigarette exposed neonatal rats.
Journal: iScience
Status: code on request

Wednesday, 29 June 2022 (1 paper)

[2014] doi:10.1038/s41598-022-14894-4 [paper, data]
A method for AI assisted human interpretation of neonatal EEG.
Journal: Scientific reports
Status: data only, 2 datasets cited

Tuesday, 28 June 2022 (2 papers)

[2015] doi:10.7554/elife.78203 [paper, repository]
Aberrant cortical development is driven by impaired cell cycle and translational control in a <i>DDX3X</i> syndrome model.
Journal: eLife
Authors' code: bioconductor.org/packages/release (no license)
Status: code verified
[2016] doi:10.1111/pin.13255 [paper, repository]
Spectrum of paired-like homeobox 2b immunoexpression in pediatric brain tumors with embryonal morphology.
Journal: Pathology international
Authors' code: a-dev-walker/CentroidParser (GPL-3.0)
Status: code verified, 3 files readable, 1 match

Monday, 27 June 2022 (1 paper)

[2017] doi:10.1016/j.isci.2022.104679 [paper, repository]
Integrated single-cell analyses decode the developmental landscape of the human fetal spine.
Journal: iScience
Authors' code: r3fang/SnapTools (Apache-2.0), ngdc.cncb.ac.cn/gsa (no license), db.cngb.org/cnsa/project (no license)
Status: code verified, 37 files readable

Friday, 24 June 2022 (2 papers)

[2018] doi:10.1186/s11689-022-09448-8 [paper, repository]
Calculating genetic risk for dysfunction in pleiotropic biological processes using whole exome sequencing data.
Journal: Journal of neurodevelopmental disorders
Status: code verified, 3 files readable, 4 matches
[2019] doi:10.1186/s12874-022-01606-9 [paper, data]
Prior test experience confounds longitudinal tracking of adolescent cognitive and motor development.
Journal: BMC medical research methodology
Status: data only, 1 dataset cited

Thursday, 23 June 2022 (2 papers)

[2020] doi:10.1242/dmm.049544 [paper, data]
Snrpb is required in murine neural crest cells for proper splicing and craniofacial morphogenesis.
Journal: Disease models & mechanisms
Status: data only, 1 dataset cited
[2021] doi:10.1002/hbm.25985 [paper, repository]
Prediction of childhood maltreatment and subtypes with personalized functional connectome of large-scale brain networks.
Journal: Human brain mapping
Status: code verified, 406 files readable, 3 matches

Wednesday, 22 June 2022 (1 paper)

[2022] doi:10.1002/hbm.25980 [paper, repository]
Voxel-wise intermodal coupling analysis of two or more modalities using local covariance decomposition.
Journal: Human brain mapping
Authors' code: hufengling/pIMCo (other), hufengling/IMCo_analyses (no license)
Status: code verified, 577 files readable, 17 matches

Tuesday, 21 June 2022 (1 paper)

[2023] doi:10.1038/s41389-022-00409-3 [paper, data]
MYCN induces cell-specific tumorigenic growth in RB1-proficient human retinal organoid and chicken retina models of retinoblastoma.
Journal: Oncogenesis
Status: data only, 1 dataset cited

Monday, 20 June 2022 (2 papers)

[2024] doi:10.1002/hbm.25977 [paper]
Allometry in the corpus callosum in neonates: Sexual dimorphism.
Journal: Human brain mapping
Status: code on request
[2025] doi:10.1016/j.ynirp.2022.100114 [paper, repository]
Harmonization of Multi-Center Diffusion Tensor Tractography in Neonates with Congenital Heart Disease: Optimizing Post-Processing and Application of ComBat.
Journal: Neuroimage. Reports
Authors' code: PIRCImagingTools/DINGO (BSD-3-Clause)
Status: code verified, 14 files readable, 1 match

Friday, 17 June 2022 (2 papers)

[2026] doi:10.1021/acschemneuro.2c00124 [paper, data]
Protective Effects of Intranasally Administrated Oxytocin-Loaded Nanoparticles on Pentylenetetrazole-Kindling Epilepsy in Terms of Seizure Severity, Memory, Neurogenesis, and Neuronal Damage.
Journal: ACS chemical neuroscience
Status: data only, 1 dataset cited
[2027] doi:10.1016/j.xpro.2022.101478 [paper]
Imaging neuronal migration and network activity in human forebrain assembloids.
Journal: STAR protocols
Status: code on request

Thursday, 16 June 2022 (2 papers)

[2028] doi:10.1371/journal.pcbi.1010190 [paper, repository]
Orchestrated neuronal migration and cortical folding: A computational and experimental study.
Journal: PLoS computational biology
Authors' code: mholla/neuronal_migration (GPL-3.0)
Status: code verified, 12 files readable, 1 match
[2029] doi:10.1155/2022/8342767 [paper, repository]
An Automated Deep Learning Model for the Cerebellum Segmentation from Fetal Brain Images.
Journal: BioMed research international
Authors' code: kaggle.com/gokulappu04/fetalbrains (no license)
Status: dead link

Wednesday, 15 June 2022 (2 papers)

[2030] doi:10.1186/s13041-022-00940-9 [paper, data]
Genome-wide translation control analysis of developing human neurons.
Journal: Molecular brain
Status: data only, 4 datasets cited
[2031] doi:10.1016/j.dcn.2022.101123 [paper, repository]
Resting-state functional connectivity identifies individuals and predicts age in 8-to-26-month-olds.
Journal: Developmental cognitive neuroscience
Status: code verified, 126 files readable, 13 matches

Tuesday, 14 June 2022 (1 paper)

[2032] doi:10.1038/s41467-022-30977-2 [paper, repository]
Morphological pseudotime ordering and fate mapping reveal diversification of cerebellar inhibitory interneurons.
Journal: Nature communications
Authors' code: wang-wendyy/morphological_pseudotime (BSD-2-Clause)
Status: code verified, 4 files readable, 1 match

Monday, 13 June 2022 (2 papers)

[2033] doi:10.1038/s41556-022-00929-5 [paper, repository]
Enhanced cortical neural stem cell identity through short SMAD and WNT inhibition in human cerebral organoids facilitates emergence of outer radial glial cells.
Journal: Nature cell biology
Authors' code: daniel-rosebrock/BrainOrganoids (no license)
Status: code verified, 12 files readable, 23 matches
[2034] doi:10.3389/fphys.2022.886298 [paper, repository]
Impact of Chronic Prenatal Stress on Maternal Neuroendocrine Function and Embryo and Placenta Development During Early-to-Mid-Pregnancy in Mice.
Journal: Frontiers in physiology
Status: code verified, 3 files readable

Wednesday, 8 June 2022 (2 papers)

[2035] doi:10.1126/sciadv.abm6340 [paper, repository]
Neural network learning defines glioblastoma features to be of neural crest perivascular or radial glia lineages.
Journal: Science advances
Authors' code: ernforslab/Hu-et-al._GBMlineage2022 (BSD-3-Clause), Zenodo 6321370 (other-open)
Status: code verified, 25 files readable, 12 matches
[2036] doi:10.3758/s13415-022-01017-9 [paper, repository]
Longitudinal maturation of resting state networks: Relevance to sustained attention and attention deficit/hyperactivity disorder.
Journal: Cognitive, affective & behavioral neuroscience
Authors' code: Zenodo 3628880 (Apache-2.0), nipy/nipype (Apache-2.0)
Status: code verified, 2,754 files readable, 4 matches

Tuesday, 7 June 2022 (2 papers)

[2037] doi:10.1007/s00429-022-02515-9 [paper, data]
Spatio-temporal brain dynamics of self-identity: an EEG source analysis of the current and past self.
Journal: Brain structure & function
Status: data only, 1 dataset cited
[2038] doi:10.3389/fnins.2022.887634 [paper, repository]
FetalGAN: Automated Segmentation of Fetal Functional Brain MRI Using Deep Generative Adversarial Learning and Multi-Scale 3D U-Net.
Journal: Frontiers in neuroscience
Authors' code: BioMedIA/IRTK (other)
Status: code verified, 951 files readable, 2 matches

Monday, 6 June 2022 (3 papers)

[2039] doi:10.1111/acel.13652 [paper, data]
Accelerated epigenetic aging in newborns with Down syndrome.
Journal: Aging cell
Status: data only, 1 dataset cited
[2040] doi:10.7554/elife.77918 [paper, repository]
Cross-modality synthesis of EM time series and live fluorescence imaging.
Journal: eLife
Authors' code: zhirongbaolab/CellIDAlignment (no license)
Status: code verified, 78 files readable, 1 match
[2041] doi:10.1016/j.dib.2022.108355 [paper, data]
Experimental data on developmental elimination of retrosplenial cortex GABAergic interneurons in a mouse model of ethanol exposure during the last trimester of human pregnancy.
Journal: Data in brief
Status: data only, 3 datasets cited

Saturday, 4 June 2022 (1 paper)

[2042] doi:10.1016/j.jbc.2022.102106 [paper, data]
Neural stemness unifies cell tumorigenicity and pluripotent differentiation potential.
Journal: The Journal of biological chemistry
Status: data only, 3 datasets cited

Friday, 3 June 2022 (3 papers)

[2043] doi:10.1126/sciadv.abm6127 [paper, repository]
Modeling spatial, developmental, physiological, and topological constraints on human brain connectivity.
Journal: Science advances
Authors' code: StuartJO/GenerativeNetworkModel (no license), Zenodo 6458464 (CC-BY-4.0)
Status: code verified, 76 files readable, 15 matches
[2044] doi:10.1038/s41386-022-01351-z [paper, repository]
Mobile footprinting: linking individual distinctiveness in mobility patterns to mood, sleep, and brain functional connectivity.
Journal: Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology
Authors' code: Zenodo 4010846 (other-open), PennLINC/footprinting (no license), pennbbl/xcpengine (MIT)
Status: code verified, 139 files readable, 12 matches
[2045] doi:10.3389/fpsyg.2022.873796 [paper, repository]
Effects of Hemodynamic Differences on the Assessment of Inter-Brain Synchrony Between Adults and Infants.
Journal: Frontiers in psychology
Authors' code: canlab/CanlabCore (GPL-2.0)
Status: code verified, 2,000 files readable, 3 matches

Thursday, 2 June 2022 (2 papers)

[2046] doi:10.1371/journal.pcbi.1010198 [paper, repository]
Radical pairs may explain reactive oxygen species-mediated effects of hypomagnetic field on neurogenesis.
Journal: PLoS computational biology
Authors' code: RishabhQuantum/RPM_ROS_HMF (MIT), Zenodo 5606149 (other-open)
Status: code verified, 6 files readable, 1 match
[2047] doi:10.3389/fcell.2022.903179 [paper, data]
m<sup>6</sup>A Modification Involves in Enriched Environment-Induced Neurogenesis and Cognition Enhancement.
Journal: Frontiers in cell and developmental biology
Status: data only, 1 dataset cited

Wednesday, 1 June 2022 (1 paper)

[2048] doi:10.1093/brain/awab479 [paper, repository]
Junctional instability in neuroepithelium and network hyperexcitability in a focal cortical dysplasia human model.
Journal: Brain : a journal of neurology
Authors' code: fpuppo/ECRtools (Apache-2.0)
Status: code verified, 51 files readable, 2 matches

Friday, 6 May 2022 (1 paper)

[2049] doi:10.1038/s41398-022-01956-4 [paper, repository]
Bayesian causal network modeling suggests adolescent cannabis use accelerates prefrontal cortical thinning.
Journal: Translational psychiatry
Authors' code: owensmax/Cannabis_Bayesian_Networks (no license)
Status: code verified, 2 files readable, 4 matches

Thursday, 5 May 2022 (1 paper)

[2050] doi:10.1093/braincomms/fcac112 [paper, repository]
Neural alterations in opioid-exposed infants revealed by edge-centric brain functional networks.
Journal: Brain communications
Status: code verified, 5 files readable, 4 matches

Wednesday, 4 May 2022 (1 paper)

[2051] doi:10.7554/elife.76707 [paper, data]
Generation of vascularized brain organoids to study neurovascular interactions.
Journal: eLife
Status: data only, 7 datasets cited

Tuesday, 3 May 2022 (2 papers)

[2052] doi:10.1038/s41598-022-11269-7 [paper, repository]
Juvenile handling rescues autism-related effects of prenatal exposure to valproic acid.
Journal: Scientific reports
Authors' code: OSF 3zbvf (no license)
Status: code verified, 2 files readable, 5 matches
[2053] doi:10.1038/s41390-022-02075-y [paper, data]
Severe intraventricular hemorrhage causes long-lasting structural damage in a preterm rabbit pup model.
Journal: Pediatric research
Status: data only, 4 datasets cited

Monday, 2 May 2022 (2 papers)

[2054] doi:10.1186/s13041-022-00926-7 [paper, data]
New neurons in old brains: implications of age in the analysis of neurogenesis in post-mortem tissue.
Journal: Molecular brain
Status: data only, 1 dataset cited
[2055] doi:10.3389/fneur.2022.827816 [paper, data]
Through-Plane Super-Resolution With Autoencoders in Diffusion Magnetic Resonance Imaging of the Developing Human Brain.
Journal: Frontiers in neurology
Status: data only, 1 dataset cited

Sunday, 1 May 2022 (5 papers)

[2056] doi:10.1093/cercor/bhab338 [paper, repository]
Impact of In Utero Exposure to Antiepileptic Drugs on Neonatal Brain Function.
Journal: Cerebral cortex (New York, N.Y. : 1991)
Authors' code: babyEEG/AED-exposed-infants (GPL-3.0)
Status: code verified, 2 files readable, 4 matches
[2057] doi:10.1093/cercor/bhab357 [paper, repository]
Phase-Based Cortical Synchrony Is Affected by Prematurity.
Journal: Cerebral cortex (New York, N.Y. : 1991)
Authors' code: pauliina-yrjola/Preterm-Phase (GPL-3.0)
Status: code verified, 4 files readable, 2 matches
[2058] doi:10.1242/bio.059189 [paper, data]
Zebrafish models of alx-linked frontonasal dysplasia reveal a role for Alx1 and Alx3 in the anterior segment and vasculature of the developing eye.
Journal: Biology open
Status: data only, 1 dataset cited
[2059] doi:10.7150/thno.72756 [paper, data]
<i>Eucommiae cortex</i> polysaccharides mitigate obesogenic diet-induced cognitive and social dysfunction via modulation of gut microbiota and tryptophan metabolism.
Journal: Theranostics
Status: data only, 1 dataset cited
[2060] doi:10.1159/000525431 [paper, data]
Antenatal Magnesium Sulfate for Preterm Neuroprotection: A Single-Center Experience from Kuwait Tertiary NICU.
Journal: Biomedicine hub
Status: data only, 1 dataset cited