OSCR

The central amygdala gates exogenous glucagon-like peptide 1 signals.

Code ↔ Paper

1 match between paragraphs of the paper and lines of its authors' code, computed by the harvester (lexical-v1). Click a colored paragraph or line to see its counterpart.

The 1 match
  1. [1] § Materials and methods › Fiber photometry recordings › Fiber photometry data analysis ↔ routine/processing.py, lines 14–100 · score 0.61 · Huber regression, nearest, photobleaching, model, fit, baseline

Paper

Loaded from Europe PMC by your browser, not stored by OSCR: doi.org · Europe PMC

The paper is loaded when this pane is shown.

The authors' code

Python · 161 lines · 5.8 KB · no license · 1 match

The registry keeps no copy of this file: its repository has no license, so its authors keep all their rights to it. Your browser shows it from its source, with JavaScript.

It can be read at the source: routine/processing.py.

Overview

Authors: Miguel Duran1, Ningxiang Zeng1, Elam J. Cutts1, Anusha Polamarasetty1, Melissa Rodriguez1, Kirk M. Habegger2, J. Andrew Hardaway1
ORCID iDs: J. Andrew Hardaway
  1. Department of Psychiatry and Behavioral Neurobiology, University of Alabama at Birmingham, Birmingham, AL 35294, USA
  2. Department of Medicine, University of Alabama at Birmingham, Birmingham, AL 35294, USA
Institutions: University of Alabama at Birmingham (United States)
Journal: Molecular metabolism, volume 110, article 102403
Dates: received 10 April 2026; accepted 13 June 2026; published online 18 June 2026; in print August 2026
Type: Research article · Language: English
License: CC BY-NC-ND
Identifiers: DOI 10.1016/j.molmet.2026.102403 · PMID 42314903 · PMCID PMC13332456 · OpenAlex W7165172499
Open access: gold, a free copy (OpenAlex)
Status: code verified
Categories: optical imaging (calcium, voltage, 2-photon) (modality), mouse (organism), cellular / molecular (subfield)
Methods: Statistics, Preprocessing, Evoked potentials, Single-unit activity, calcium imaging, Physiology & signal measures
Keywords: GLP-1 receptor, Central amygdala, Chemogenetics, Fiber photometry, Exendin-4
MeSH: Central Amygdaloid Nucleus*, Glucagon-Like Peptide 1*, Animals, Exenatide, Glucagon-Like Peptide-1 Receptor, Glucagon-Like Peptide-1 Receptor Agonists, Male, Mice, Mice, Inbred C57BL, Neurons, Signal Transduction (* major topic)
Topic: Diabetes Treatment and Management (Endocrinology, Diabetes and Metabolism, Medicine), according to OpenAlex
Funding: F31DK138767; K01DK115902; R03DK129561; R01DK140308
Citations: not cited yet (Europe PMC); 93 references in the paper
Research resources: Chicken anti-GFP RRID:AB_2307313, Normal Donkey Serum RRID:AB_2337258, RRID:AB_2340607, Rabbit anti-mCherry RRID:AB_2552323, RRID:Addgene_104492, RRID:Addgene_44362, pAAV-hSyn-DIO-mCherry (6.25∗1012 GC/ml) RRID:Addgene_50459, Mouse: STOCK Ssttm2.1(cre)Zjh/J RRID:IMSR_JAX:013044, RRID:IMSR_JAX:028862, Mouse: STOCK Glp1rtm1.1(cre)Lbrl/RcngJ RRID:IMSR_JAX:029283, RRID:MMRRC_011559-UCD, ImageJ/FIJI RRID:SCR_002285, Graphpad Prism v10 RRID:SCR_002798, Adobe Illustrator RRID:SCR_010279, pCLAMP v10 RRID:SCR_011323, Microsoft Excel RRID:SCR_016137, Bonsai RRID:SCR_017218, Keyence BZ-X810 Fluorescent Microscope RRID:SCR_023617

Abstract

The abstract is not reproduced here: the paper's license (CC BY-NC-ND) does not allow it. Read it in the paper, at the publisher or on Europe PMC.

Repositories

Its files are read in the Code ↔ Paper reader above, with 1 match between paragraphs and lines of code.

OpenBehavior/Modular-Stereotaxic-Holders

License: GPL-3.0
State: the link answers, verified on 27 September 2026
Evidence: files inventoried
Commit: 88639b72a483eb3d5334a1c93836b1d82eb3b9c1, 6 September 2022
Size: 9 files, 0 scripts
Software Heritage: not archived
Found in: the text, “Stereotaxic surgery”
Holds: README, license file
Not found: CITATION.cff, environment file, tests, continuous integration, documentation
Availability: 1 check, the latest on 27 September 2026: the link answers
  • 27 September 2026: the link answers
2 files
At the source: github.com/OpenBehavior/Modular-Stereotaxic-Holders

Hardaway-Lab/FED3-Photometry_Workflows

License: none: the authors keep all their rights
State: the link answers, verified on 27 September 2026
Evidence: files inventoried
Commit: c860df8c711c840a4b016fe6c0f53a9efa5d09b0, 31 August 2024
Languages: Python (10), Jupyter (3)
Size: 37 files, 13 scripts
Software Heritage: not archived
Found in: the text, “Fiber photometry data analysis”
Holds: README, 3 notebooks
Not found: license file, CITATION.cff, environment file, tests, continuous integration, documentation
Tools: pandas (7 files), NumPy (6 files), Plotly (2 files), scikit-learn (2 files), SciPy (2 files)
Availability: 1 check, the latest on 27 September 2026: the link answers
  • 27 September 2026: the link answers
14 files, not copied: shown from their source

OSCR keeps no copy of these files: this repository has no license that allows it. The reader above shows each one from its source, fetched by your browser at commit c860df8, when its fingerprint is the one OSCR verified. How this works.

At the source: github.com/Hardaway-Lab/FED3-Photometry_Workflows

Tracing map

Proposed by the machine: these links were found in the paper and verified at the source, without human review. The map will receive a Zenodo DOI once one of the paper's authors has validated it with their ORCID.

What the map holds:

  • 2 repositories of the authors' code, each at its verified commit, with its license and how the link was found in the paper;
  • 13 scripts, each with its path and the digest of its content;
  • 1 match between paragraphs of the paper and lines of the code (method lexical-v1);
  • neither the text of the paper nor the code itself.

Its JSON (tracing-map.json) is deposited on Zenodo with its DOI once the map is validated.

Data

No dataset and no data link were found in the paper.

Data availability statement

The paper has a data availability statement. Its license (CC BY-NC-ND) does not allow reproducing it here; in short, from what the harvester recognized in it:

  • it says that the data are available on request

Read it in the paper: doi.org/10.1016/j.molmet.2026.102403.

Versions

The history of this record: each version stored by the harvester or made by a correction of its authors or of the maintainers of its code, and what changed in its facts. The texts of the paper (its abstract, its availability statements) are not part of it; versions that changed only those are not listed.

Version 2, 28 September 2026

  • Authors: added J. Andrew Hardaway (0000-0003-3893-2658); removed J. Andrew Hardaway

Version 1, 27 September 2026: the first record

Recorded: type, language, journal, volume, pages, dates, 7 authors, 5 keywords, 11 MeSH terms, 4 funders, 92 references, 18 RRIDs.

Cite

This paper

Duran, M., Zeng, N., Cutts, E. J., Polamarasetty, A., Rodriguez, M., Habegger, K. M., & Hardaway, J. A. (2026). The central amygdala gates exogenous glucagon-like peptide 1 signals. Molecular metabolism, 110, 102403. https://doi.org/10.1016/j.molmet.2026.102403

BibTeX

@article{duran2026central,
author = {Duran, Miguel and Zeng, Ningxiang and Cutts, Elam J. and Polamarasetty, Anusha and Rodriguez, Melissa and Habegger, Kirk M. and Hardaway, J. Andrew},
title = {{The central amygdala gates exogenous glucagon-like peptide 1 signals}},
journal = {Molecular metabolism},
year = {2026},
month = jun,
volume = {110},
pages = {102403},
publisher = {Elsevier},
issn = {2212-8778},
doi = {10.1016/j.molmet.2026.102403},
url = {https://doi.org/10.1016/j.molmet.2026.102403},
pmid = {42314903},
pmcid = {PMC13332456}
}

RIS

TY - JOUR
AU - Duran, Miguel
AU - Zeng, Ningxiang
AU - Cutts, Elam J.
AU - Polamarasetty, Anusha
AU - Rodriguez, Melissa
AU - Habegger, Kirk M.
AU - Hardaway, J. Andrew
TI - The central amygdala gates exogenous glucagon-like peptide 1 signals
T2 - Molecular metabolism
J2 - Mol Metab
PY - 2026
DA - 2026/06/18
VL - 110
SP - 102403
SN - 2212-8778
PB - Elsevier
DO - 10.1016/j.molmet.2026.102403
UR - https://doi.org/10.1016/j.molmet.2026.102403
LA - en
ER -

CSL-JSON

{
"id": "10.1016/j.molmet.2026.102403",
"type": "article-journal",
"title": "The central amygdala gates exogenous glucagon-like peptide 1 signals",
"container-title": "Molecular metabolism",
"author": [
{
"family": "Duran",
"given": "Miguel"
},
{
"family": "Zeng",
"given": "Ningxiang"
},
{
"family": "Cutts",
"given": "Elam J."
},
{
"family": "Polamarasetty",
"given": "Anusha"
},
{
"family": "Rodriguez",
"given": "Melissa"
},
{
"family": "Habegger",
"given": "Kirk M."
},
{
"family": "Hardaway",
"given": "J. Andrew"
}
],
"container-title-short": "Mol Metab",
"volume": "110",
"page": "102403",
"DOI": "10.1016/j.molmet.2026.102403",
"PMID": "42314903",
"PMCID": "PMC13332456",
"ISSN": "2212-8778",
"publisher": "Elsevier",
"URL": "https://doi.org/10.1016/j.molmet.2026.102403",
"language": "en",
"issued": {
"date-parts": [
[
2026,
6,
18
]
]
}
}

The tracing map gets a citation of its own once an author has validated it and it has a DOI.

Similar papers

The papers with a page that share the most with this one: the tools found in their code, their categories, datasets, cited references and authors, the rarest counting most.

[1] doi:10.1038/s41586-026-10444-4 [code]
A brain reward circuit inhibited by next-generation weight-loss drugs in mice.
Journal: Nature
In common: Plotly, pandas, SciPy, 1 other tool, mouse, 16 references
[2] doi:10.7554/elife.108663 [code]
The Crunchometer, a low-cost, open-source acoustic analysis of feeding microstructure.
Journal: eLife
In common: scikit-learn, pandas, SciPy, 1 other tool, mouse, 3 references
[3] doi:10.1016/j.stem.2026.05.005 [code]
Generation of human appetite-regulating neurons and tanycytes from pluripotent stem cells.
Journal: Cell stem cell
In common: Plotly, scikit-learn, pandas, 2 other tools, cellular / molecular, 2 references
[4] doi:10.1016/j.isci.2026.116206 [code]
Gut distension evokes rapid neural dynamics in vagal and hindbrain populations of larval zebrafish.
Journal: iScience
In common: scikit-learn, pandas, SciPy, 1 other tool, optical imaging (calcium, voltage, 2-photon), 2 references
[5] doi:10.3389/fnsys.2026.1822122 [code]
Convergence-divergence circuits for multimodal integration of innate and learned opponent valences.
Journal: Frontiers in systems neuroscience
In common: Plotly, scikit-learn, pandas, 2 other tools, 1 reference
[6] doi:10.7554/elife.110277 [code]
Functional imaging of nine distinct neuronal populations under a miniscope in freely behaving animals.
Journal: eLife
In common: Plotly, scikit-learn, pandas, 2 other tools, optical imaging (calcium, voltage, 2-photon), mouse
[7] doi:10.1002/advs.202510822 [code]
How Neuromorphic Microstructures Control In Vitro Early-Stage Neuronal Outgrowth.
Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)
In common: Plotly, scikit-learn, pandas, 2 other tools, optical imaging (calcium, voltage, 2-photon)
[8] doi:10.1038/s42003-026-10957-8 [code]
Brain defence by the extracellular matrix protein Cochlin.
Journal: Communications biology
In common: Plotly, scikit-learn, pandas, 2 other tools, mouse, cellular / molecular
[9] doi:10.2147/jir.s633117 [code]
Single-Nucleus Transcriptomic Mapping Reveals Correlative Microglial Changes Associated with rTMS in the Motor Cortex After Spinal Cord Injury.
Journal: Journal of inflammation research
In common: Plotly, scikit-learn, pandas, 2 other tools, mouse, cellular / molecular
[10] doi:10.1002/imt2.70163 [code]
Spatial multi-omics unveils sphingolipid metabolic reprogramming within the retinal pathological niche.
Journal: iMeta
In common: Plotly, scikit-learn, pandas, 2 other tools, mouse, cellular / molecular

Contribute

The authors of this paper can claim it, correct its record and validate its tracing map, and the maintainers of its code (its owner, or a public member of its organization) correct what it says of their repository; anyone signed in can ask for its removal. Every request goes to OSCR's own machine, which answers it; your account page follows them.

Sign in with ORCID to claim this paper as one of its authors, correct its record or validate its tracing map: when the paper's metadata lists your ORCID iD, you are recognized at once. Maintainers of its code: sign in with GitHub, then claim the repository on your account page.

Request its removal

To ask OSCR to remove this record, the copies of its authors' scripts or its tracing map, use the removal request page: signed in, you say who you are, what to remove and why, then review and confirm the request. Published rules decide every request (how).

Discussion, reproductions, activity

Discussion: questions and error reports about this paper and its code, from signed-in readers and its authors. It opens with sign-in.

Reproductions: reports from readers who ran the authors' code: what they reproduced, with which environment, commit and data. It opens with sign-in.

Activity: what happens around this paper: new versions of its record, its map's validation, discussions and reproductions. It opens with sign-in.