Protocol for Seahorse 3D Mito Stress assay in patient-derived atypical teratoid rhabdoid tumor CHLA-05-ATRT single neurospheres.
Overview
- Children’s Hospital Los Angeles, Cancer and Blood Disease Institute, Los Angeles, CA, USA
- Children’s Hospital Los Angeles, Saban Research Institute, Los Angeles, CA, USA
- Keck School of Medicine of University of Southern California, Department of Pediatrics, Los Angeles, CA, USA
- USC Norris Comprehensive Cancer Center, Epigenetic Regulation in Cancer Program, Los Angeles, CA, USA
Abstract
The abstract is not reproduced here: the paper's license (CC BY-NC-ND) does not allow it. Read it in the paper, at the publisher or on Europe PMC.
Code
The paper says that its authors' code is available on request: it was not published with the paper, so there is nothing to verify.
The paper's code and data availability statement is in the Data section.
Tracing map
A tracing map links a paper to the code its authors published: this paper has none (its code is available on request), so it has no map.
Data
No dataset and no data link were found in the paper.
Code and data availability statement
The paper has a code and data availability statement. Its license (CC BY-NC-ND) does not allow reproducing it here; in short, from what the harvester recognized in it:
- it says that the data are available on request
- it says that the code is available on request
Read it in the paper: doi.org/10.1016/j.xpro.2026.104515.
Versions
The history of this record: each version stored by the harvester or made by a correction of its authors or of the maintainers of its code, and what changed in its facts. The texts of the paper (its abstract, its availability statements) are not part of it; versions that changed only those are not listed.
Version 1, 30 September 2026: the first record
Recorded: type, language, journal, volume, issue, pages, dates, 2 authors, 3 keywords, 8 MeSH terms, 38 funders, 13 references.
Cite
This paper
Tocci, S., & Tsai, J. W. (2026). Protocol for Seahorse 3D Mito Stress assay in patient-derived atypical teratoid rhabdoid tumor CHLA-05-ATRT single neurospheres. STAR protocols, 7(2), 104515. https://
BibTeX
@article{tocci2026protoc
author = {Tocci, Stefania and Tsai, Jessica W.},
title = {{Protocol for Seahorse 3D Mito Stress assay in patient-derived atypical teratoid rhabdoid tumor CHLA-05-ATRT single neurospheres}},
journal = {STAR protocols},
year = {2026},
month = apr,
volume = {7},
number = {2},
pages = {104515},
publisher = {Elsevier},
issn = {2666-1667},
doi = {10.1016/
url = {https://
pmid = {42033730},
pmcid = {PMC13127629}
}
RIS
TY - JOUR
AU - Tocci, Stefania
AU - Tsai, Jessica W.
TI - Protocol for Seahorse 3D Mito Stress assay in patient-derived atypical teratoid rhabdoid tumor CHLA-05-ATRT single neurospheres
T2 - STAR protocols
J2 - STAR Protoc
PY - 2026
DA - 2026/
VL - 7
IS - 2
SP - 104515
SN - 2666-1667
PB - Elsevier
DO - 10.1016/
UR - https://
LA - en
ER -
CSL-JSON
{
"id": "10.1016/
"type": "article-journal",
"title": "Protocol for Seahorse 3D Mito Stress assay in patient-derived atypical teratoid rhabdoid tumor CHLA-05-ATRT single neurospheres",
"container-title": "STAR protocols",
"author": [
{
"family": "Tocci",
"given": "Stefania"
},
{
"family": "Tsai",
"given": "Jessica W."
}
],
"container-title-short":
"volume": "7",
"issue": "2",
"page": "104515",
"DOI": "10.1016/
"PMID": "42033730",
"PMCID": "PMC13127629",
"ISSN": "2666-1667",
"publisher": "Elsevier",
"URL": "https://
"language": "en",
"issued": {
"date-parts": [
[
2026,
4,
24
]
]
}
}
Similar papers
The papers with a page that share the most with this one: the tools found in their code, their categories, datasets, cited references and authors, the rarest counting most.
- [1] doi:10.1016/j.clinsp.2026.101003
- Identification of metabolism-associated molecular classification and prognostic genes for medulloblastoma based on bioinformatics analysis.Journal: Clinics (Sao Paulo, Brazil)In common: other condition, 2 references
- [2] doi:10.1002/nbm.70220
- Band-Selective IR PRESS for Brain Tumor Spectroscopy Allows Robust Detection of Lactate.Journal: NMR in biomedicineIn common: other condition, 1 reference
- [3] doi:10.1016/j.isci.2026.117247
- Brain assembloids reveal efficacy and off target effects in high grade glioma brain cancer.Journal: iScienceIn common: other condition, 1 reference
- [4] doi:10.1016/j.isci.2026.115361
- Glioblastoma invasion into different organoid hosts reveals cell-intrinsic and proliferative migratory programs.Journal: iScienceIn common: other condition, 1 reference
- [5] doi:10.1158/2767-9764.crc-25-0579 [code]
- Glioblastoma Subtypes Exhibit Distinct Migration Mechanics and Immune Responses.Journal: Cancer research communicationsIn common: other condition, 1 reference
- [6] doi:10.1007/s12672-026-05341-1
- Single-cell data analysis of lung cancer brain metastasis reveals SEC61G serves as a potential risk indicator.Journal: Discover oncologyIn common: other condition, 1 reference
- [7] doi:10.1158/2767-9764.crc-25-0639 [code]
- Interleukin-34-Induced Arg1+ Macrophages Play a Key Role in Breast Cancer Brain Metastasis.Journal: Cancer research communicationsIn common: other condition, 1 reference
- [8] doi:10.1111/jcmm.71154
- Mitophagy-Oxidative Stress Molecular Subtypes Define an Immunosuppressive Ecosystem and Vulnerabilities in Glioblastoma.Journal: Journal of cellular and molecular medicineIn common: other condition, 1 reference
- [9] doi:10.1186/s12920-025-02190-9
- Apolipoprotein D downregulation in OSCC: multi-database validation and clinical significance.Journal: BMC medical genomicsIn common: other condition, 1 reference
- [10] doi:10.1016/j.jbc.2026.113091
- Structure and enzymology of glutaminase S482C and H461L variants associated with excess brain glutamate and neurological disease.Journal: The Journal of biological chemistryIn common: 1 reference
Contribute
The authors of this paper can claim it, correct its record and validate its tracing map, and the maintainers of its code (its owner, or a public member of its organization) correct what it says of their repository; anyone signed in can ask for its removal. Every request goes to OSCR's own machine, which answers it; your account page follows them.
Sign in with ORCID to claim this paper as one of its authors, correct its record or validate its tracing map: when the paper's metadata lists your ORCID iD, you are recognized at once. Maintainers of its code: sign in with GitHub, then claim the repository on your account page.
Claim this paper
Correct its record
Say what each link of this record is, remove the ones that are not the paper's, add the ones that are missing. The correction becomes a new version of the record, in its Versions section.
Request its removal
To ask OSCR to remove this record, the copies of its authors' scripts or its tracing map, use the removal request page: signed in, you say who you are, what to remove and why, then review and confirm the request. Published rules decide every request (how).
Discussion, reproductions, activity
Discussion: questions and error reports about this paper and its code, from signed-in readers and its authors. It opens with sign-in.
Reproductions: reports from readers who ran the authors' code: what they reproduced, with which environment, commit and data. It opens with sign-in.
Activity: what happens around this paper: new versions of its record, its map's validation, discussions and reproductions. It opens with sign-in.