OSCR

Two-photon 3D imaging of optically stimulated neural activity at 100 Hz.

Overview

Authors: Dongli Xu1, Fuu-Jiun Hwang2, Jun B Ding2,3,4, Leilei Peng1
  1. Wyant College of Optical Sciences, University of Arizona, Tucson, AZ 85721 USA
  2. Department of Neurosurgery, Stanford University, Stanford, CA 94305 USA
  3. Department of Neurology and Neurological Sciences, Stanford University, Stanford, CA 94305 USA
  4. Wu-Tsai Neuroscience Institute, Stanford University, Stanford, CA 94305 USA
Institutions: University of Arizona (United States); Stanford University (United States); Stanford Medicine (United States)
Journal: Light, science & applications, volume 15, issue 1, article 303
Dates: received 11 December 2025; accepted 11 June 2026; published online 3 July 2026
Type: Research article · Language: English
License: CC BY
Identifiers: DOI 10.1038/s41377-026-02395-2 · PMID 42393079 · PMCID PMC13328388 · OpenAlex W7167047868
Open access: gold, a free copy (OpenAlex)
Status: data only
Methods: Preprocessing, Evoked potentials, fMRI & imaging, Single-unit activity, calcium imaging
Keywords: Imaging and sensing, Biophotonics
Topic: Advanced Fluorescence Microscopy Techniques (Biophysics, Biochemistry, Genetics and Molecular Biology), according to OpenAlex
Funding: U.S. Department of Health & Human Services | NIH | National Institute of Biomedical Imaging and Bioengineering (NIBIB) (R56EB034921, R01EB034921); NIBIB NIH HHS (R56 EB034921, R01 EB034921); U.S. Department of Health & Human Services | NIH | National Institute of Biomedical Imaging and Bioengineering (R01EB034921, R56EB034921); NINDS NIH HHS (R01 NS091144)
Citations: not cited yet (Europe PMC); 29 references in the paper

Abstract

Understanding how neurons integrate synaptic inputs requires imaging techniques capable of capturing rapid, three-dimensional dendritic events. These processes occur on millisecond timescales and submicron spatial scales, exceeding the speed of conventional two-photon microscopy (2PM). We developed dual-view Bessel two-photon projection microscopy (dv-B2PM), a high-speed volumetric imaging approach that achieves 100 Hz whole-volume acquisition with synaptic-level resolution. dv-B2PM simultaneously records two orthogonal projections of the same 3D volume, preserving spatial information while minimizing ambiguity from structural overlap. Combining dv-B2PM with two-photon glutamate uncaging, we visualized 3D Ca²⁺ dynamics in neurons following localized stimulation. Multi-timescale analysis revealed dendrite-to-soma Ca²⁺ signal propagation, back propagated Ca²⁺ signal from the soma, and multi-frequency (5–40 Hz) Ca²⁺ transients activated along apical dendrites at speeds from ten of microns per second to millimeters per seconds. These findings demonstrate dv-B2PM as a powerful tool for direct visualization of 3D calcium dynamics associated with dendritic integration across extended neuronal structures, bridging the gap between optical imaging and the dynamic biophysics of neuronal integration.

Reproduced under the paper's license (CC BY), from the paper cited above.

Code

The paper links to its data, not to its authors' code: see the Data section.

The paper's code and data availability statement is in the Data section.

Tracing map

A tracing map links a paper to the code its authors published: this paper has none, so it has no map.

Data

Datasets cited

Data availability

Image data and scripts used to analyze the data can be downloaded at.https://zenodo.org/records/17887796.

Reproduced under the paper's license (CC BY), from the paper cited above.

Versions

The history of this record: each version stored by the harvester or made by a correction of its authors or of the maintainers of its code, and what changed in its facts. The texts of the paper (its abstract, its availability statements) are not part of it; versions that changed only those are not listed.

Version 1, 27 September 2026: the first record

Recorded: type, language, journal, volume, issue, pages, dates, 4 authors, 2 keywords, 4 funders, 29 references.

Cite

This paper

Xu, D., Hwang, F.-J., Ding, J. B., & Peng, L. (2026). Two-photon 3D imaging of optically stimulated neural activity at 100 Hz. Light, science & applications, 15(1), 303. https://doi.org/10.1038/s41377-026-02395-2

BibTeX

@article{xu2026two,
author = {Xu, Dongli and Hwang, Fuu-Jiun and Ding, Jun B and Peng, Leilei},
title = {{Two-photon 3D imaging of optically stimulated neural activity at 100 Hz}},
journal = {Light, science \& applications},
year = {2026},
month = jul,
volume = {15},
number = {1},
pages = {303},
publisher = {Nature Publishing Group},
issn = {2095-5545},
doi = {10.1038/s41377-026-02395-2},
url = {https://doi.org/10.1038/s41377-026-02395-2},
pmid = {42393079},
pmcid = {PMC13328388}
}

RIS

TY - JOUR
AU - Xu, Dongli
AU - Hwang, Fuu-Jiun
AU - Ding, Jun B
AU - Peng, Leilei
TI - Two-photon 3D imaging of optically stimulated neural activity at 100 Hz
T2 - Light, science & applications
J2 - Light Sci Appl
PY - 2026
DA - 2026/07/03
VL - 15
IS - 1
SP - 303
SN - 2095-5545
PB - Nature Publishing Group
DO - 10.1038/s41377-026-02395-2
UR - https://doi.org/10.1038/s41377-026-02395-2
LA - en
ER -

CSL-JSON

{
"id": "10.1038/s41377-026-02395-2",
"type": "article-journal",
"title": "Two-photon 3D imaging of optically stimulated neural activity at 100 Hz",
"container-title": "Light, science & applications",
"author": [
{
"family": "Xu",
"given": "Dongli"
},
{
"family": "Hwang",
"given": "Fuu-Jiun"
},
{
"family": "Ding",
"given": "Jun B"
},
{
"family": "Peng",
"given": "Leilei"
}
],
"container-title-short": "Light Sci Appl",
"volume": "15",
"issue": "1",
"page": "303",
"DOI": "10.1038/s41377-026-02395-2",
"PMID": "42393079",
"PMCID": "PMC13328388",
"ISSN": "2095-5545",
"publisher": "Nature Publishing Group",
"URL": "https://doi.org/10.1038/s41377-026-02395-2",
"language": "en",
"issued": {
"date-parts": [
[
2026,
7,
3
]
]
}
}

Similar papers

The papers with a page that share the most with this one: the tools found in their code, their categories, datasets, cited references and authors, the rarest counting most.

[1] doi:10.1038/s41598-026-58107-8
Three-dimensional voltage imaging in live larval zebrafish brains using fully genetically encoded voltage indicator.
Journal: Scientific reports
In common: optical imaging (calcium, voltage, 2-photon), 3 references
[2] doi:10.1371/journal.pcbi.1013752 [code]
Calmodulin controls spatial and temporal specificity of calcium-induced calcium release.
Journal: PLoS computational biology
In common: 3 references
[3] doi:10.1126/sciadv.adq8840 [code]
Astrocytes mediate the dopaminergic modulation of tonic GABAergic signaling in substantia nigra.
Journal: Science advances
In common: author Jun Ding
[4] doi:10.1038/s41467-026-72437-1 [code]
High-speed whole-brain imaging in Drosophila.
Journal: Nature communications
In common: 3 references
[5] doi:10.7554/elife.108352 [code]
Analysis of dendritic input currents during place field dynamics.
Journal: eLife
In common: 3 references
[6] doi:10.1038/s41592-026-03043-8 [code]
Designer indicators for two-photon recording of subthreshold voltage dynamics.
Journal: Nature methods
In common: optical imaging (calcium, voltage, 2-photon), 2 references
[7] doi:10.1038/s41592-026-03179-7 [code]
Voltage imaging of neurons distributed across entire brains of larval zebrafish.
Journal: Nature methods
In common: optical imaging (calcium, voltage, 2-photon), 2 references
[8] doi:10.1016/j.isci.2026.117010 [code]
Deep learning-assisted mapping of dendritic spines using sequential 2D two-photon calcium imaging.
Journal: iScience
In common: optical imaging (calcium, voltage, 2-photon), 2 references
[9] doi:10.3390/biomedicines14081670 [code]
Limited Detectability of Network Functional Alterations in a Tauopathy Model Using Mouse Primary Cortical Cultures.
Journal: Biomedicines
In common: optical imaging (calcium, voltage, 2-photon), 1 reference
[10] doi:10.1038/s41592-026-03066-1 [code]
A multimodal adaptive optical microscope for in vivo imaging from molecules to organisms.
Journal: Nature methods
In common: optical imaging (calcium, voltage, 2-photon), 1 reference

Contribute

The authors of this paper can claim it, correct its record and validate its tracing map, and the maintainers of its code (its owner, or a public member of its organization) correct what it says of their repository; anyone signed in can ask for its removal. Every request goes to OSCR's own machine, which answers it; your account page follows them.

Sign in with ORCID to claim this paper as one of its authors, correct its record or validate its tracing map: when the paper's metadata lists your ORCID iD, you are recognized at once. Maintainers of its code: sign in with GitHub, then claim the repository on your account page.

Request its removal

To ask OSCR to remove this record, the copies of its authors' scripts or its tracing map, use the removal request page: signed in, you say who you are, what to remove and why, then review and confirm the request. Published rules decide every request (how).

Discussion, reproductions, activity

Discussion: questions and error reports about this paper and its code, from signed-in readers and its authors. It opens with sign-in.

Reproductions: reports from readers who ran the authors' code: what they reproduced, with which environment, commit and data. It opens with sign-in.

Activity: what happens around this paper: new versions of its record, its map's validation, discussions and reproductions. It opens with sign-in.