OSCR

Fine-mapping genomic loci refines bipolar disorder risk genes.

A correction to this paper has been published: the notice, 41145888, from Europe PMC.

This page is built on request from the registry's record of the paper. The 6,000 most recent papers have a fuller page, built ahead of time, with the Code ↔ Paper reader, the tracing map and its validation, the record's versions, how to cite it and similar papers. This paper is older: its record, its code, its data and the requests about it are below.

Code

118 files of its code read; 5 matches between paragraphs and code. The Code ↔ Paper reader is built for the 6,000 most recent papers only: this paper's code is read at its source.

mkoromina/SAFFARI

License: none: the authors keep all their rights
State: the link answers
Copies: kept by the registry: this license allows it

Mullins-Lab/Post-finemap_processing

License: none: the authors keep all their rights
State: the link answers
Copies: kept by the registry: this license allows it

Yves-CHEN/DENTIST

License: LGPL-3.0
State: the link answers
Copies: kept by the registry: this license allows it

omerwe/polyfun

License: MIT
State: the link answers
Copies: kept by the registry: this license allows it

getian107/PRScs

License: MIT
State: the link answers
Copies: kept by the registry: this license allows it

mommy003/r2redux

License: none: the authors keep all their rights
State: the link answers
Copies: kept by the registry: this license allows it

Ripkelab/ricopili

License: none: the authors keep all their rights
State: the link answers
Copies: kept by the registry: this license allows it
Tools found in the code: h5py, NetworkX, NumPy, pandas, rpy2, scikit-learn, SciPy, tidyverse

Overview

Authors: Maria Koromina, Ashvin Ravi, Georgia Panagiotaropoulou, Brian M Schilder, Jack Humphrey, Alice Braun, Tim Bigdeli, Chris Chatzinakos, Brandon J Coombes, Jaeyoung Kim, Xiaoxi Liu, Chikashi Terao, Kevin S O’Connell, Mark J Adams, Rolf Adolfsson, Martin Alda, Lars Alfredsson, Till F M Andlauer, Ole A Andreassen, Anastasia Antoniou
and 113 other authorsBernhard T Baune, Susanne Bengesser, Joanna Biernacka, Michael Boehnke, Rosa Bosch, Murray J Cairns, Vaughan J Carr, Miquel Casas, Stanley Catts, Sven Cichon, Aiden Corvin, Nicholas Craddock, Konstantinos Dafnas, Nina Dalkner, Udo Dannlowski, Franziska Degenhardt, Arianna Di Florio, Dimitris Dikeos, Frederike Tabea Fellendorf, Panagiotis Ferentinos, Andreas J Forstner, Liz Forty, Mark Frye, Janice M Fullerton, Micha Gawlik, Ian R Gizer, Katherine Gordon-Smith, Melissa J Green, Maria Grigoroiu-Serbanescu, José Guzman-Parra, Tim Hahn, Frans Henskens, Jan Hillert, Assen V Jablensky, Lisa Jones, Ian Jones, Lina Jonsson, John R Kelsoe, Tilo Kircher, George Kirov, Sarah Kittel-Schneider, Manolis Kogevinas, Mikael Landén, Marion Leboyer, Melanie Lenger, Jolanta Lissowska, Christine Lochner, Carmel Loughland, Donald J MacIntyre, Nicholas G Martin, Eirini Maratou, Carol A Mathews, Fermin Mayoral, Susan L McElroy, Nathaniel W McGregor, Andrew McIntosh, Andrew McQuillin, Patricia Michie, Philip B Mitchell, Paraskevi Moutsatsou, Bryan Mowry, Bertram Müller-Myhsok, Richard M Myers, Igor Nenadić, Caroline M Nievergelt, Markus M Nöthen, John Nurnberger, Michael O ’Donovan, Claire O ’Donovan, Roel A Ophoff, Michael J Owen, Christos Pantelis, Carlos Pato, Michele T Pato, George P Patrinos, Joanna M Pawlak, Roy H Perlis, Evgenia Porichi, Danielle Posthuma, Josep Antoni Ramos-Quiroga, Andreas Reif, Eva Z Reininghaus, Marta Ribasés, Marcella Rietschel, Ulrich Schall, Peter R Schofield, Thomas G Schulze, Laura Scott, Rodney J Scott, Alessandro Serretti, Jordan W Smoller, Beata Świątkowska, Maria Soler Artigas, Dan J Stein, Fabian Streit, Claudio Toma, Paul Tooney, Marquis P Vawter, Eduard Vieta, John B Vincent, Irwin D Waldman, Cynthia Shannon Weickert, Thomas Weickert, Stephanie H Witt, Kyung Sue Hong, Masashi Ikeda, Nakao Iwata, Hong-Hee Won, Howard J Edenberg, Stephan Ripke, Towfique Raj, Jonathan R I Coleman, Niamh Mullins
Published: 25 June 2025
Type: Research article
Status: code verified (how the code is found and verified)
License: CC BY-NC-ND
Institutions: Icahn School of Medicine at Mount Sinai (United States), Charité – Universitätsmedizin Berlin (Germany), SUNY Downstate Health Sciences University (United States), Mayo Clinic (United States), Samsung Medical Center (South Korea), Sungkyunkwan University (South Korea), Shizuoka General Hospital (Japan), RIKEN Center for Integrative Medical Sciences (Japan), Shizuoka University (Japan), University of Shizuoka (Japan), Oslo University Hospital (Norway), University of Oslo (Norway), University of Edinburgh (United Kingdom), Umeå University (Sweden), Dalhousie University (Canada), National Institute of Mental Health (Czechia), Karolinska Institutet (Sweden), TUM Klinikum (Germany), Technical University of Munich (Germany), National and Kapodistrian University of Athens (Greece), University General Hospital Attikon (Greece), The University of Melbourne (Australia), University of Münster (Germany), Florey Institute of Neuroscience and Mental Health (Australia), Medical University of Graz (Austria), University of Michigan (United States), Instituto de Salud Carlos III (Spain), Centro de Investigación Biomédica en Red de Salud Mental (Spain), Institut de Recerca Sant Joan de Déu (Spain), University of Newcastle Australia (Australia), UNSW Sydney (Australia), The University of Queensland (Australia), University of Bonn (Germany), Forschungszentrum Jülich (Germany), University of Basel (Switzerland), University Hospital Bonn (Germany), University Hospital of Basel (Switzerland), Trinity College Dublin (Ireland), Cardiff University (United Kingdom), Essen University Hospital (Germany), University of Duisburg-Essen (Germany), University of North Carolina at Chapel Hill (United States), King's College London (United Kingdom), Philipps University of Marburg (Germany), Neuroscience Research Australia (Australia), University of Würzburg (Germany), Universitätsklinikum Würzburg (Germany), University of Missouri (United States), University of Worcester (United Kingdom), Spitalul Clinic de Psihiatrie Alexandru Obregia (Romania), Instituto de Investigación Biomédica de Málaga (Spain), The University of Western Australia (Australia), University of Gothenburg (Sweden), University of California San Diego (United States), University College Cork (Ireland), University Hospital Frankfurt (Germany), Barcelona Institute for Global Health (Spain), Inserm (France), Université Paris-Est Créteil (France), Assistance Publique – Hôpitaux de Paris (France), Institut Mondor de Recherche Biomédicale (France), The Maria Sklodowska-Curie National Research Institute of Oncology (Poland), Stellenbosch University (South Africa), QIMR Berghofer Medical Research Institute (Australia), University of Florida (United States), Lindner Center of HOPE (United States), University College London (United Kingdom), Munich Cluster for Systems Neurology (Germany), Max Planck Institute of Psychiatry (Germany), HudsonAlpha Institute for Biotechnology (United States), Justus-Liebig-Universität Gießen (Germany), Indiana University Indianapolis (United States), Indiana University School of Medicine (United States), University of California, Los Angeles (United States), University of Patras (Greece), United Arab Emirates University (United Arab Emirates), Erasmus MC (Netherlands), Erasmus University Rotterdam (Netherlands), Poznan University of Medical Sciences (Poland), Harvard University (United States), Massachusetts General Hospital (United States), Amsterdam Neuroscience (Netherlands), Vrije Universiteit Amsterdam (Netherlands), Amsterdam UMC Location Vrije Universiteit Amsterdam (Netherlands), Universitat Autònoma de Barcelona (Spain), Vall d'Hebron Institut de Recerca (Spain), Vall d'Hebron Hospital Universitari (Spain), Universitat de Barcelona (Spain), Heidelberg University (Germany), Central Institute of Mental Health (Germany), Medizinische Fakultät Mannheim (Germany), Johns Hopkins University (United States), SUNY Upstate Medical University (United States), Johns Hopkins Medicine (United States), Universitätsmedizin Göttingen (Germany), Institut für Psychiatrische Phänomik und Genomik (Germany), University of Göttingen (Germany), Ludwig-Maximilians-Universität München (Germany), Università degli Studi di Enna Kore (Italy), I.R.C.C.S. Oasi Maria SS (Italy), Broad Institute (United States), Stanley Center for Psychiatric Research (United States), Nofer Institute of Occupational Medicine (Poland), South African Medical Research Council (South Africa), University of Cape Town (South Africa), Deutsches Zentrum für Psychische Gesundheit (Germany), Consejo Superior de Investigaciones Científicas (Spain), Centro de Biología Molecular Severo Ochoa (Spain), Universidad Autónoma de Madrid (Spain), University of California, Irvine (United States), Consorci Institut D'Investigacions Biomediques August Pi I Sunyer (Spain), Centre for Addiction and Mental Health (Canada), Campbell Family Mental Health Research Institute (Canada), Emory University (United States), University of British Columbia (Canada), Fujita Health University (Japan), South London and Maudsley NHS Foundation Trust (United Kingdom), NIHR Maudsley Biomedical Research Centre (United Kingdom)

Data

Datasets cited

Contribute

The authors of this paper can claim it and correct its record, and the maintainers of its code (its owner, or a public member of its organization) correct what it says of their repository; anyone signed in can ask for its removal. Every request goes to the registry's own machine, which answers it; your account page follows them.

Sign in with ORCID to claim this paper as one of its authors or correct its record: when the paper's metadata lists your ORCID iD, you are recognized at once. Maintainers of its code: sign in with GitHub, then claim the repository on your account page.

Add the badge to the code's README

OSCR: the badge of this paper

Authors and maintainers of this paper's code: the badge says what OSCR knows of the paper and links the code to this page. Paste one of these under the README's title. Keep the two marks around it: they let the badge be replaced in place, never added twice. Nothing is changed for you.

Markdown
<!-- oscr-badge:start -->
[![OSCR](https://openscicode.org/badge/doi/10.1038/s41593-025-01998-z.svg)](https://openscicode.org/badge/doi/10.1038/s41593-025-01998-z)
<!-- oscr-badge:end -->
reStructuredText
.. oscr-badge:start

.. image:: https://openscicode.org/badge/doi/10.1038/s41593-025-01998-z.svg
   :target: https://openscicode.org/badge/doi/10.1038/s41593-025-01998-z
   :alt: OSCR

.. oscr-badge:end
HTML
<!-- oscr-badge:start -->
<a href="https://openscicode.org/badge/doi/10.1038/s41593-025-01998-z"><img src="https://openscicode.org/badge/doi/10.1038/s41593-025-01998-z.svg" alt="OSCR"></a>
<!-- oscr-badge:end -->

On GitHub, open the README, choose Edit (the pencil), paste the snippet under the title, then "Commit changes".

Or let it be kept for you, once you choose it: oscr badge --write from the command line, or the GitHub Action in your repository's workflows. Every other form is on the badge page.

Request its removal

To ask for this record, the copies of its authors' scripts or its tracing map to be removed, use the removal request page: signed in, you say who you are, what to remove and why, then review and confirm the request. Published rules decide every request (how).