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Microglial TDP-43 mediates myelin refinement and represses Tyrobp cryptic exon inclusion in mice.

Overview

Authors: Anne-Claire Compagnion1, Andranik Ivanov2, Anil Rana3, Felipe Espinoza1, Thomas Sandmann3, Fanny S. Martineau1, Katia Monsorno1, Roberta Facchinetti4, Alessandro Matera1, Lionel Rougé3, Fernando González Ibáñez5,6, Clarissa Catale7,8, Matteo Bizzotto9, Sonia Garel7,8, Michela Matteoli9,10, Yutaro Kashiwagi11, Ryuta Koyama12, Christian Haass13,14,15, Marie-Eve Tremblay6, Dieter Beule2, Ileana Jelescu16, Valerio Zerbi17,18, Gilbert Di Paolo3, Rosa C. Paolicelli1
18 affiliations
  1. Department of Biomedical Sciences, University of Lausanne,Lausanne, Switzerland
  2. Core Unit Bioinformatics, Berlin Institute of Health, Charité—Universitätsmedizin Berlin,Berlin, Germany
  3. Denali Therapeutics,South San Francisco, CA USA
  4. Department of Life Sciences, Health and Health Professions, Link Campus University,Rome, Italy
  5. Département de Médecine Moléculaire, Faculté de Médecine, Université Laval,Quebec City, Quebec Canada
  6. School of Medical Sciences, University of Victoria,Victoria, British Columbia Canada
  7. Institut de Biologie de l’Ecole Normale Supérieure (IBENS), Ecole Normale Supérieure, CNRS, INSERM, Université PSL, Team Brain Development and Plasticity,Paris, France
  8. Collège de France, Université PSL,Paris, France
  9. IRCCS Humanitas Research Hospital,Rozzano, Italy
  10. Humanitas University,Pieve Emanuele, Italy
  11. Department of Cellular Neurobiology, Graduate School of Medicine, The University of Tokyo,Tokyo, Japan
  12. Department of Translational Neurobiology, National Institute of Neuroscience, National Center of Neurology and Psychiatry,Tokyo, Japan
  13. Biomedical Center (BMC), Department of Anatomy and Cell Biology, Faculty of Medicine, Ludwig-Maximilians-Universität München,Planegg-Martinsried, Germany
  14. Munich Cluster of Systems Neurology (SyNergy),Munich, Germany
  15. German Center for Neurodegenerative Diseases (DZNE),Munich, Germany
  16. Department of Radiology, Lausanne University Hospital,Lausanne, Switzerland
  17. Department of Psychiatry, Faculty of Medicine, University of Geneva,Geneva, Switzerland
  18. Department of Basic Neurosciences, Faculty of Medicine, University of Geneva,Geneva, Switzerland
Journal: Nature neuroscience, volume 29, issue 8, pages 1841-1857
Dates: received 15 December 2024; accepted 26 May 2026; published online 8 July 2026; in print 2026
Type: Research article · Language: English
License: CC BY
Identifiers: DOI 10.1038/s41593-026-02348-3 · PMID 42420559 · PMCID PMC13433257 · OpenAlex W7167684641
Open access: hybrid, a free copy (OpenAlex)
Status: data only
Categories: mouse (organism), cellular / molecular (subfield)
Methods: Statistics, Smoothing, state filtering, decompositions, Machine learning, fMRI & imaging
Keywords: Microglia, Neurodegeneration
MeSH: Adaptor Proteins, Signal Transducing*, DNA-Binding Proteins*, Membrane Proteins*, Microglia*, Myelin Sheath*, Animals, Brain, Exons, Membrane Glycoproteins, Mice, Mice, Inbred C57BL, Mice, Knockout, Receptors, Immunologic (* major topic)
Topic: Neuroinflammation and Neurodegeneration Mechanisms (Neurology, Neuroscience), according to OpenAlex
Funding: ERC StGrant 804949 Dementia Research Synapsis Foundation; Mexican Council of Science and Technology; Fondation Roger de Spoelberch and Chair d'Excellence MicroProtect France 2030 (ANR 25-CHBS-0009); ERC AdGrant (MATILDA 101055323); AMED under Grant Number: JP23jf0126004; CIHR Project Grant 461831, Tier II CRC in Neurobiology of Aging and Cognition CRC-2019-00407 and CFI John R. Evans Leaders Fund 39965; SNSF Eccellenza (PCEFP2_194260)
Citations: not cited yet (Europe PMC); 72 references in the paper
Research resources: Statistics were performed using FSL RRID:SCR_002823, RRID:SCR_004757

Abstract

TDP-43 proteinopathy is a hallmark of neurodegenerative disorders such as amyotrophic lateral sclerosis and frontotemporal dementia where mislocalization of TDP-43 has been observed in neurons and glial cells. However, the role of TDP-43 in microglia and the consequences of its loss of function remain unexplored. Combining magnetic resonance imaging, and confocal, and electron microscopy, we uncovered structural changes and myelin abnormalities in the early postnatal brain of mice lacking microglial TDP-43. Spatial transcriptomics further revealed an enriched interferon-responsive signature associated with oligodendrocyte dysfunction. Early depletion of microglial TDP-43 led to motor deficits in adult mice. Mechanistically, knocking out TDP-43 impaired microglial ability to engulf and degrade myelin. It also led to cryptic exon inclusion in the Tyrobp mRNA, resulting in truncated DAP12 protein, thus causing defective TREM2 signaling. Our findings reveal a role for TDP-43 in regulating the TREM2-DAP12 axis in mice, highlighting a previously unrecognized mechanism through which TDP-43 controls microglial function.

Reproduced under the paper's license (CC BY), from the paper cited above.

Code

The paper links to its data, not to its authors' code: see the Data section.

Code availability

No custom software codes were used in the data analysis for this paper.

Reproduced under the paper's license (CC BY), from the paper cited above.

Tracing map

A tracing map links a paper to the code its authors published: this paper has none, so it has no map.

Data

Datasets cited

Data availability

10x Visium spatial transcriptomics dataset is publicly available on GEO repository under accession GSE309857 (https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE309857). Bulk RNA-seq dataset is publicly available on GEO repository under accession GSE309858 (https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE309858). Proteomics dataset is available on PRIDE repository under accession PXD070157 (http://proteomecentral.proteomexchange.org/cgi/GetDataset?ID=PXD070157). Source data are provided with this paper.

Reproduced under the paper's license (CC BY), from the paper cited above.

Versions

The history of this record: each version stored by the harvester or made by a correction of its authors or of the maintainers of its code, and what changed in its facts. The texts of the paper (its abstract, its availability statements) are not part of it; versions that changed only those are not listed.

Version 2, 28 September 2026

  • Publisher: n/a → Nature Portfolio

Version 1, 27 September 2026: the first record

Recorded: type, language, journal, volume, issue, pages, dates, 24 authors, 2 keywords, 13 MeSH terms, 7 funders, 72 references, 2 RRIDs.

Cite

This paper

Compagnion, A.-C., Ivanov, A., Rana, A., Espinoza, F., Sandmann, T., Martineau, F. S., Monsorno, K., Facchinetti, R., Matera, A., Rougé, L., González Ibáñez, F., Catale, C., Bizzotto, M., Garel, S., Matteoli, M., Kashiwagi, Y., Koyama, R., Haass, C., Tremblay, M.-E., . . . Paolicelli, R. C. (2026). Microglial TDP-43 mediates myelin refinement and represses Tyrobp cryptic exon inclusion in mice. Nature neuroscience, 29(8), 1841-1857. https://doi.org/10.1038/s41593-026-02348-3

BibTeX

@article{compagnion2026microglial,
author = {Compagnion, Anne-Claire and Ivanov, Andranik and Rana, Anil and Espinoza, Felipe and Sandmann, Thomas and Martineau, Fanny S. and Monsorno, Katia and Facchinetti, Roberta and Matera, Alessandro and Rougé, Lionel and González Ibáñez, Fernando and Catale, Clarissa and Bizzotto, Matteo and Garel, Sonia and Matteoli, Michela and Kashiwagi, Yutaro and Koyama, Ryuta and Haass, Christian and Tremblay, Marie-Eve and Beule, Dieter and Jelescu, Ileana and Zerbi, Valerio and Di Paolo, Gilbert and Paolicelli, Rosa C.},
title = {{Microglial TDP-43 mediates myelin refinement and represses Tyrobp cryptic exon inclusion in mice}},
journal = {Nature neuroscience},
year = {2026},
month = jul,
volume = {29},
number = {8},
pages = {1841--1857},
publisher = {Nature Portfolio},
issn = {1097-6256},
doi = {10.1038/s41593-026-02348-3},
url = {https://doi.org/10.1038/s41593-026-02348-3},
pmid = {42420559},
pmcid = {PMC13433257}
}

RIS

TY - JOUR
AU - Compagnion, Anne-Claire
AU - Ivanov, Andranik
AU - Rana, Anil
AU - Espinoza, Felipe
AU - Sandmann, Thomas
AU - Martineau, Fanny S.
AU - Monsorno, Katia
AU - Facchinetti, Roberta
AU - Matera, Alessandro
AU - Rougé, Lionel
AU - González Ibáñez, Fernando
AU - Catale, Clarissa
AU - Bizzotto, Matteo
AU - Garel, Sonia
AU - Matteoli, Michela
AU - Kashiwagi, Yutaro
AU - Koyama, Ryuta
AU - Haass, Christian
AU - Tremblay, Marie-Eve
AU - Beule, Dieter
AU - Jelescu, Ileana
AU - Zerbi, Valerio
AU - Di Paolo, Gilbert
AU - Paolicelli, Rosa C.
TI - Microglial TDP-43 mediates myelin refinement and represses Tyrobp cryptic exon inclusion in mice
T2 - Nature neuroscience
J2 - Nat Neurosci
PY - 2026
DA - 2026/07/08
VL - 29
IS - 8
SP - 1841
EP - 1857
SN - 1097-6256
PB - Nature Portfolio
DO - 10.1038/s41593-026-02348-3
UR - https://doi.org/10.1038/s41593-026-02348-3
LA - en
ER -

CSL-JSON

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