OSCR

Multi-site benchmark classification of major depressive disorder using machine learning on cortical and subcortical measures.

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Code

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Jfortin1/ComBatHarmonization

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State: the link answers
Copies: kept by the registry: this license allows it
Tools found in the code: neuroCombat, NumPy, pandas, tidyverse

Overview

Authors: Vladimir Belov, Tracy Erwin-Grabner, Moji Aghajani, Andre Aleman, Alyssa R. Amod, Zeynep Basgoze, Francesco Benedetti, Bianca Besteher, Robin Bülow, Christopher R. K. Ching, Colm G. Connolly, Kathryn Cullen, Christopher G. Davey, Danai Dima, Annemiek Dols, Jennifer W. Evans, Cynthia H. Y. Fu, Ali Saffet Gonul, Ian H. Gotlib, Hans J. Grabe
and 46 other authorsNynke Groenewold, J Paul Hamilton, Ben J. Harrison, Tiffany C. Ho, Benson Mwangi, Natalia Jaworska, Neda Jahanshad, Bonnie Klimes-Dougan, Sheri-Michelle Koopowitz, Thomas Lancaster, Meng Li, David E. J. Linden, Frank P. MacMaster, David M. A. Mehler, Elisa Melloni, Bryon A. Mueller, Amar Ojha, Mardien L. Oudega, Brenda W. J. H. Penninx, Sara Poletti, Edith Pomarol-Clotet, Maria J. Portella, Elena Pozzi, Liesbeth Reneman, Matthew D. Sacchet, Philipp G. Sämann, Anouk Schrantee, Kang Sim, Jair C. Soares, Dan J. Stein, Sophia I. Thomopoulos, Aslihan Uyar-Demir, Nic J. A. van der Wee, Steven J. A. van der Werff, Henry Völzke, Sarah Whittle, Katharina Wittfeld, Margaret J. Wright, Mon-Ju Wu, Tony T. Yang, Carlos Zarate, Dick J. Veltman, Lianne Schmaal, Paul M. Thompson, Roberto Goya-Maldonado, the ENIGMA Major Depressive Disorder working group
Published: 11 January 2024
Type: Research article
Status: code verified (how the code is found and verified)
License: CC BY
Institutions: Universitätsmedizin Göttingen (Germany), Leiden University (Netherlands), University Medical Center Groningen (Netherlands), University of Groningen (Netherlands), University of Cape Town (South Africa), University of Minnesota (United States), IRCCS Ospedale San Raffaele (Italy), Jena University Hospital (Germany), Leibniz Institute for Plasma Science and Technology (Germany), University of Southern California (United States), Florida State University (United States), The University of Melbourne (Australia), University of London (United Kingdom), King's College London (United Kingdom), Amsterdam Neuroscience (Netherlands), Amsterdam Public Health (Netherlands), Amsterdam University Medical Centers (Netherlands), Vrije Universiteit Amsterdam (Netherlands), National Institutes of Health (United States), National Institute of Mental Health (United States), University of East London (United Kingdom), Ege University (Türkiye), Stanford University (United States), Linköping University (Sweden), University of California, Los Angeles (United States), University of California, San Francisco (United States), The University of Texas Health Science Center at Houston (United States), McGill University (Canada), Cardiff University (United Kingdom), Maastricht University (Netherlands), University of Calgary (Canada), RWTH Aachen University (Germany), University of Pittsburgh (United States), Center for the Neural Basis of Cognition (United States), Centro de Investigación Biomédica en Red de Salud Mental (Spain), Institut de Recerca Sant Pau (Spain), Orygen (Australia), Harvard University (United States), Massachusetts General Hospital (United States), Max Planck Institute of Psychiatry (Germany), Institute of Mental Health (Singapore), National University of Singapore (Singapore), Nanyang Technological University (Singapore), Leiden University Medical Center (Netherlands), Melbourne Health (Australia), German Center for Neurodegenerative Diseases (Germany), The University of Queensland (Australia)

Data

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.. image:: https://openscicode.org/badge/doi/10.1038/s41598-023-47934-8.svg
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   :alt: OSCR

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