Explainable machine learning of PROGRESS-Plus social factors predicts cognitive trajectories after traumatic brain injury.
Overview
- KITE Toronto Rehabilitation Institute, University Health Network,Toronto, ON Canada
- Faculty of Applied Science and Engineering, University of Toronto,Toronto, ON Canada
- Institute for Management and Innovation, University of Toronto Mississauga,Mississauga, ON Canada
- Dalla Lana School of Public Health, University of Toronto,Toronto, ON Canada
- Rehabilitation Sciences Institute, Temerty Faculty of Medicine, University of Toronto,Toronto, ON Canada
- Department of Occupational Science and Occupational Therapy, Temerty Faculty of Medicine, University of Toronto,Toronto, ON Canada
- Global Brain Health Institute, Trinity College Dublin,Dublin, Ireland
Abstract
The abstract is not reproduced here: the paper's license (CC BY-NC-ND) does not allow it. Read it in the paper, at the publisher or on Europe PMC.
Code
No file of the authors' code could be read here: it is described below, and read at its source.
OSF 5sjvx
Availability: 1 check, the latest on 30 September 2026: the link answers (HTTP 200)
- 30 September 2026: the link answers (HTTP 200)
The paper's code and data availability statement is in the Data section.
Tracing map
Proposed by the machine: these links were found in the paper and verified at the source, without human review. The map will receive a Zenodo DOI once one of the paper's authors has validated it with their ORCID.
What the map holds:
- 1 repository of the authors' code, each at its verified commit, with its license and how the link was found in the paper;
- 0 scripts, each with its path and the digest of its content;
- no match between paragraphs and code yet;
- neither the text of the paper nor the code itself.
Its JSON (tracing-map.json) is deposited on Zenodo with its DOI once the map is validated.
Data
No dataset and no data link were found in the paper.
Code and data availability statement
The paper has a code and data availability statement. Its license (CC BY-NC-ND) does not allow reproducing it here; in short, from what the harvester recognized in it:
- it says that the data are available on request
- it says that the code is available on request
Read it in the paper: doi.org/10.1038/s41598-026-44818-5.
Versions
The history of this record: each version stored by the harvester or made by a correction of its authors or of the maintainers of its code, and what changed in its facts. The texts of the paper (its abstract, its availability statements) are not part of it; versions that changed only those are not listed.
Version 1, 30 September 2026: the first record
Recorded: type, language, journal, volume, issue, pages, dates, 4 authors, 9 keywords, 11 MeSH terms, 2 funders, 85 references.
Cite
This paper
Xu, J., Shaikh, U., Tylinski Sant’Ana, T., & Mollayeva, T. (2026). Explainable machine learning of PROGRESS-Plus social factors predicts cognitive trajectories after traumatic brain injury. Scientific reports, 16(1), 10629. https://
BibTeX
@article{xu2026explainab
author = {Xu, Jingwen and Shaikh, Urooba and Tylinski Sant’Ana, Thaisa and Mollayeva, Tatyana},
title = {{Explainable machine learning of PROGRESS-Plus social factors predicts cognitive trajectories after traumatic brain injury}},
journal = {Scientific reports},
year = {2026},
month = mar,
volume = {16},
number = {1},
pages = {10629},
publisher = {Nature Publishing Group},
issn = {2045-2322},
doi = {10.1038/
url = {https://
pmid = {41912580},
pmcid = {PMC13039392}
}
RIS
TY - JOUR
AU - Xu, Jingwen
AU - Shaikh, Urooba
AU - Tylinski Sant’Ana, Thaisa
AU - Mollayeva, Tatyana
TI - Explainable machine learning of PROGRESS-Plus social factors predicts cognitive trajectories after traumatic brain injury
T2 - Scientific reports
J2 - Sci Rep
PY - 2026
DA - 2026/
VL - 16
IS - 1
SP - 10629
SN - 2045-2322
PB - Nature Publishing Group
DO - 10.1038/
UR - https://
LA - en
ER -
CSL-JSON
{
"id": "10.1038/
"type": "article-journal",
"title": "Explainable machine learning of PROGRESS-Plus social factors predicts cognitive trajectories after traumatic brain injury",
"container-title": "Scientific reports",
"author": [
{
"family": "Xu",
"given": "Jingwen"
},
{
"family": "Shaikh",
"given": "Urooba"
},
{
"family": "Tylinski Sant’Ana",
"given": "Thaisa"
},
{
"family": "Mollayeva",
"given": "Tatyana"
}
],
"container-title-short":
"volume": "16",
"issue": "1",
"page": "10629",
"DOI": "10.1038/
"PMID": "41912580",
"PMCID": "PMC13039392",
"ISSN": "2045-2322",
"publisher": "Nature Publishing Group",
"URL": "https://
"language": "en",
"issued": {
"date-parts": [
[
2026,
3,
30
]
]
}
}
The tracing map gets a citation of its own once an author has validated it and it has a DOI.
Similar papers
The papers with a page that share the most with this one: the tools found in their code, their categories, datasets, cited references and authors, the rarest counting most.
- [1] doi:10.1002/hbm.26280 [code]
- Rethinking recovery in adolescent concussions: Network-level functional connectivity alterations associated with motor deficits.Journal: Human brain mappingIn common: traumatic brain injury, 2 references
- [2] doi:10.1038/s41598-023-45683-2
- Gender versus sex in predicting outcomes of traumatic brain injury: a cohort study utilizing large administrative databases.Journal: Scientific reportsIn common: traumatic brain injury, 2 references
- [3] doi:10.1038/s41598-022-21067-w [code]
- The influence of self-reported history of mild traumatic brain injury on cognitive performance.Journal: Scientific reportsIn common: traumatic brain injury, 2 references
- [4] doi:10.3390/brainsci16010073
- Early Functional Recovery Trajectories After Severe Traumatic Brain Injury: A Secondary Analysis of the TBIMS National Database.Journal: Brain sciencesIn common: traumatic brain injury, 2 references
- [5] doi:10.1093/braincomms/fcaf216 [code]
- Distinct clinical phenotypes and their neuroanatomic correlates in chronic traumatic brain injury.Journal: Brain communicationsIn common: traumatic brain injury, 2 references
- [6] doi:10.1093/braincomms/fcae407 [code]
- Concussion leads to opposing sensorimotor effects of habituation deficit and fatigue in zebrafish larvae.Journal: Brain communicationsIn common: traumatic brain injury, 2 references
- [7] doi:10.1038/s41746-025-01714-y
- Predicting outcomes after moderate and severe traumatic brain injury using artificial intelligence: a systematic review.Journal: NPJ digital medicineIn common: traumatic brain injury, 2 references
- [8] doi:10.1002/alz.71186
- Harmonizing neuropsychological test data across prospective studies.Journal: Alzheimer's & dementia : the journal of the Alzheimer's AssociationIn common: 2 references
- [9] doi:10.7717/peerj.21593
- Investigation of brain connectivity alteration in the non-severe traumatic brain injury: an emotional condition study.Journal: PeerJIn common: traumatic brain injury, 1 reference
- [10] doi:10.1007/s00415-026-14028-0 [code]
- Personality change after traumatic brain injury: a systematic review and meta-analysis.Journal: Journal of neurologyIn common: traumatic brain injury, 1 reference
Contribute
The authors of this paper can claim it, correct its record and validate its tracing map, and the maintainers of its code (its owner, or a public member of its organization) correct what it says of their repository; anyone signed in can ask for its removal. Every request goes to OSCR's own machine, which answers it; your account page follows them.
Sign in with ORCID to claim this paper as one of its authors, correct its record or validate its tracing map: when the paper's metadata lists your ORCID iD, you are recognized at once. Maintainers of its code: sign in with GitHub, then claim the repository on your account page.
Claim this paper
Correct its record
Say what each link of this record is, remove the ones that are not the paper's, add the ones that are missing. The correction becomes a new version of the record, in its Versions section.
Validate its tracing map
You validate the map as this page shows it: 1 repository of the authors' code, each at its verified commit and with its license, 0 scripts, and 0 matches between paragraphs and code (see the Code and Map sections). It then receives a DOI on Zenodo, with you (your ORCID iD) and OSCR as its creators; the code itself is not deposited.
The map's fingerprint: sha256:b7511a9df20db41f…
Add the badge to the code's README
If you are an author or a maintainer of this paper's code, you can add this badge. It says what OSCR knows of the paper (its code, its validated tracing map) and links the code to this page. Paste one of these snippets under the README's title. Keep the two marks around it, so that the badge can be replaced in place and is never added twice. OSCR changes nothing in your repository.
Markdown
<!-- oscr-badge:start -->
[](https://openscicode.org/badge/doi/10.1038/s41598-026-44818-5)
<!-- oscr-badge:end -->reStructuredText
.. oscr-badge:start
.. image:: https://openscicode.org/badge/doi/10.1038/s41598-026-44818-5.svg
:target: https://openscicode.org/badge/doi/10.1038/s41598-026-44818-5
:alt: OSCR
.. oscr-badge:endHTML
<!-- oscr-badge:start -->
<a href="https://openscicode.org/badge/doi/10.1038/s41598-026-44818-5"><img src="https://openscicode.org/badge/doi/10.1038/s41598-026-44818-5.svg" alt="OSCR"></a>
<!-- oscr-badge:end -->If you choose to, you can have the badge kept up to date for you, with oscr badge --write from the command line or with the GitHub Action in your repository's workflows. Every other form and option (a card, AsciiDoc, LaTeX, shields.io) is on the badge page.
Request its removal
To ask OSCR to remove this record, the copies of its authors' scripts or its tracing map, use the removal request page: signed in, you say who you are, what to remove and why, then review and confirm the request. Published rules decide every request (how).
Discussion, reproductions, activity
Discussion: code errors and mismatches between the code and the paper about this paper and its code, from readers and its authors, beside the paper and its tracing map.
Report a mismatch between the code and the paper · Report a code error (signed in)
Reproductions: reports from readers who ran the authors' code and did not get the paper's result, what they ran, with which environment, commit and data.
Report a reproduction failure (signed in)
Activity: what happens around this paper: new versions of its record, its map's validation, discussions and reproductions. It opens with sign-in.
