traumatic brain injury

Population: 53 papers with a page, 23 of them with their authors' code.

Saturday, 26 September 2026 (1 paper)

[1] Code ↔ Paper doi:10.1007/s00429-026-03166-w [paper, repository]

Autoencoders for unsupervised analysis of rat myeloarchitecture.

Journal: Brain structure & function

Authors' code: UEF-Multiscale-Imaging/AE-and-GMM-myelin-stained-tissue (MIT)

Status: code verified, 53 files readable, 6 matches

Tuesday, 25 August 2026 (1 paper)

[2] doi:10.3389/fnmol.2026.1844343 [paper, data]

Molecular abnormalities scale across three models of cerebral injury.

Journal: Frontiers in molecular neuroscience

Status: data only, 2 datasets cited

Saturday, 22 August 2026 (1 paper)

[3] Code ↔ Paper doi:10.3390/jcm15176499 [paper, repository]

Perioperative Matrix Metalloproteinase-2 and Matrix Metalloproteinase-9 Profiles in Acute and Chronic Subdural Hematomas.

Journal: Journal of clinical medicine

Authors' code: Zenodo 197104 (CC-BY-NC-ND-4.0)

Status: empty repository

Friday, 21 August 2026 (1 paper)

[4] doi:10.3389/fcell.2026.1876873 [paper, data]

Multi-omics integration reveals TIM-4 as a master regulatory hub of neuroinflammation and neuronal cell death.

Journal: Frontiers in cell and developmental biology

Status: data only, 1 dataset cited

Wednesday, 19 August 2026 (2 papers)

[5] doi:10.1080/17590914.2026.2691563 [paper, data]

Shared Transcriptomic and Epigenomic Signatures Between Traumatic Brain Injury and Music Exposure: An Integrative Proof of Concept.

Journal: ASN neuro

Status: data only, 1 dataset cited

[6] doi:10.3389/fncel.2026.1894226 [paper, data]

Boldine treatment prevents chronic cognitive impairment and exaggerated fear learning in rats exposed to repetitive low-level blast injury.

Journal: Frontiers in cellular neuroscience

Status: data only, 1 dataset cited

Friday, 14 August 2026 (1 paper)

[7] Code ↔ Paper doi:10.1186/s44477-026-00045-w [paper, repository]

Proteomic analysis of human chronic traumatic encephalopathy brain implicates proteasome and ribosome dysfunction in disease severity.

Journal: Molecular neurodegeneration advances

Authors' code: BU-Neuromics/cte-proteomics-2026 (no license)

Status: code verified, 10 files readable, 9 matches

Thursday, 13 August 2026 (1 paper)

[8] Code ↔ Paper doi:10.1371/journal.pone.0355739 [paper, repository]

The effects of blast-induced traumatic brain injury on brain cellular mechanics and differentiation.

Journal: PloS one

Authors' code: kaggle.com/datasets/masudnabila (no license)

Status: dead link

Wednesday, 12 August 2026 (1 paper)

[9] doi:10.1002/advs.77111 [paper, data]

Endothelial miR-15a/16-1 Regulation of SYNE1 Mediates Structural and Functional Recovery after Traumatic Brain Injury.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Status: data only, 1 dataset cited

Tuesday, 11 August 2026 (1 paper)

[10] Code ↔ Paper doi:10.2147/dddt.s624727 [paper, repository]

Lower Risk of Incident Dementia with SGLT2 Inhibitor Versus DPP-4 Inhibitor Initiation in Patients with Type 2 Diabetes and Prior Traumatic Brain Injury: A Retrospective Cohort Study.

Journal: Drug design, development and therapy

Authors' code: dovepress.com/article/supplementary_file (no license)

Status: code verified

Wednesday, 5 August 2026 (3 papers)

[11] Code ↔ Paper doi:10.1155/ijbi/9929121 [paper, repository]

Automated Semisupervised Measurement of Optic Nerve Sheath Diameter From CT Following Traumatic Brain Injury.

Journal: International journal of biomedical imaging

Authors' code: kaggle.com/competitions/rsna-intracranial-hemorrhage-detection (no license)

Status: dead link

[12] Code ↔ Paper doi:10.7717/peerj.21623 [paper, repository]

Observable signs of concussion in professional slap fighting using established video review protocols for professional sports: frequency, predictors, and implications for public concussion recognition awareness.

Journal: PeerJ

Authors' code: supp:PMC13452423/peerj-14-21623-s004.rmd (no license)

Status: code verified, 1 file readable, 1 match

[13] doi:10.7717/peerj.21593 [paper, data]

Investigation of brain connectivity alteration in the non-severe traumatic brain injury: an emotional condition study.

Journal: PeerJ

Status: data only, 1 dataset cited

Monday, 3 August 2026 (1 paper)

[14] Code ↔ Paper doi:10.1007/s00415-026-14028-0 [paper, repository]

Personality change after traumatic brain injury: a systematic review and meta-analysis.

Journal: Journal of neurology

Authors' code: vaughanbell/personality-change-TBI-meta (MIT)

Status: code verified, 2 files readable, 1 match

Thursday, 30 July 2026 (1 paper)

[15] Code ↔ Paper doi:10.1002/adhm.202503457 [paper, repository]

A 3D Human Neuron-on-Chip Platform to Monitor Neuronal Injury Responses.

Journal: Advanced healthcare materials

Authors' code: Thorowen/Calcium-imaging-data-processing (no license)

Status: code verified, 4 files readable, 3 matches

Thursday, 23 July 2026 (1 paper)

[16] doi:10.2340/jrm.v58.46093 [paper]

Long-term medical and psychosocial vulnerability after home return following severe traumatic brain injury.

Journal: Journal of rehabilitation medicine

Status: code on request

Saturday, 18 July 2026 (1 paper)

[17] Code ↔ Paper doi:10.1038/s41467-026-75588-3 [paper, repository]

Frequency-dependent effects of motor thalamus deep brain stimulation on speech and swallowing.

Journal: Nature communications

Authors' code: emg27/mThal_Face_2026 (MIT)

Status: code verified, 28 files readable, 9 matches

Thursday, 16 July 2026 (1 paper)

[18] doi:10.1038/s41467-026-75367-0 [paper, data]

Heterogenous microglial reactivity contrasts with stable vascular transcriptional programs in mouse models of Alzheimer's, CADASIL, and Traumatic Brain Injury.

Journal: Nature communications

Status: data only, 1 dataset cited

Sunday, 12 July 2026 (1 paper)

[19] doi:10.1093/braincomms/fcag268 [paper, data]

A single mild closed-head injury disrupts synaptic strength and promotes hippocampal hyperexcitability in mice.

Journal: Brain communications

Status: data only, 1 dataset cited

Thursday, 9 July 2026 (1 paper)

[20] doi:10.3390/ijms27146143 [paper]

Integrated WGCNA and Network Pharmacology Explore the Potential Mechanisms of D-Limonene in Alleviating Traumatic Brain Injury.

Journal: International journal of molecular sciences

Status: code on request

Friday, 3 July 2026 (1 paper)

[21] doi:10.1126/sciadv.aed8653 [paper, data]

Targeting astrocytic Dp71 attenuates BBB disruption after traumatic brain injury through WTAP-associated m<sup>6</sup>A regulation of MMP2.

Journal: Science advances

Status: data only, 1 dataset cited

Thursday, 2 July 2026 (1 paper)

[22] Code ↔ Paper doi:10.1016/j.ynirp.2026.100377 [paper, repository]

Accelerated brain aging in Veterans with posttraumatic stress symptoms and mild traumatic brain injury.

Journal: Neuroimage. Reports

Authors' code: vishnubashyam/DeepBrainNet (no license)

Status: code verified, 4 files readable

Wednesday, 1 July 2026 (2 papers)

[23] Code ↔ Paper doi:10.1093/braincomms/fcag254 [paper, repository]

Brain age gap as a diffusion MRI-based marker of traumatic brain injury-related brain changes and associated outcomes.

Journal: Brain communications

Authors' code: diciphr-lab (no license)

Status: code verified

[24] doi:10.1117/1.nph.13.3.035010 [paper, data]

Toward comprehensive multimodal neuromonitoring of surrogates of cerebral autoregulation in traumatic brain injury: insights from a hyperventilation protocol.

Journal: Neurophotonics

Status: data only, 1 dataset cited

Friday, 26 June 2026 (2 papers)

[25] doi:10.1007/s10753-026-02549-9 [paper]

A Dynamic and Complex Early Inflammatory Response in Blood and Cerebrospinal Fluid of Severe Traumatic Brain Injury Patients: A Dual Platform Analysis.

Journal: Inflammation

Status: code on request

[26] Code ↔ Paper doi:10.1136/tsaco-2025-001974 [paper, repository]

Association of alcohol use with helmet use in cyclists: analysis of the National Trauma Data Bank.

Journal: Trauma surgery & acute care open

Authors' code: toofastdan117/TQP_bike_alcohol_helmets (no license)

Status: code verified, 5 files readable, 7 matches

Friday, 19 June 2026 (1 paper)

[27] doi:10.3389/fimmu.2026.1867920 [paper, data]

A self-perpetuating neuron-intrinsic GSDMD-mtDNA-AIM2 inflammasome axis drives neuronal pyroptosis and cognitive impairment after traumatic brain injury.

Journal: Frontiers in immunology

Status: data only, 1 dataset cited

Thursday, 18 June 2026 (1 paper)

[28] doi:10.1038/s41598-026-53148-5 [paper, data]

Neurovascular and inflammatory effects of biperiden in the acute phase of moderate traumatic brain injury: evidence from a non-human primate model.

Journal: Scientific reports

Status: data only, 1 dataset cited

Monday, 15 June 2026 (1 paper)

[29] doi:10.1002/advs.202501197 [paper, data]

GPR124 Alleviates Blood-Brain Barrier Disruption by Enhancing Microvascular Endothelial Function after Traumatic Brain Injury.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Status: data only, 1 dataset cited

Sunday, 14 June 2026 (1 paper)

[30] Code ↔ Paper doi:10.1503/cmaj.251721 [paper, repository]

Differences in admission to trauma centres by sex among adults with traumatic brain injury: a population-based cohort study.

Journal: CMAJ : Canadian Medical Association journal = journal de l'Association medicale canadienne

Authors' code: ices.on.ca/das (no license)

Status: code verified

Saturday, 13 June 2026 (1 paper)

[31] doi:10.1186/s13195-026-02110-8 [paper]

Cognitive, biomarker, and neuroimaging indices associated with traumatic encephalopathy syndrome across two independent athlete cohorts.

Journal: Alzheimer's research & therapy

Status: code on request

Friday, 12 June 2026 (3 papers)

[32] Code ↔ Paper doi:10.7554/elife.100642 [paper, repository]

Disrupted hippocampal theta-gamma coupling and spike-field coherence following experimental traumatic brain injury.

Journal: eLife

Authors' code: WolfLabPenn/Adam-eLife_2026 (MIT)

Status: code verified, 16 files readable, 4 matches

[33] doi:10.1016/j.xcrm.2026.102867 [paper]

Psilocybin restores behavior and 5-HT<sub>2A</sub> signaling while reducing microglial density after chronic traumatic brain injury in rats.

Journal: Cell reports. Medicine

Status: code on request

[34] doi:10.1038/s41598-026-57082-4 [paper, data]

Glucose-to-potassium ratio has a non-linear J-shaped association with acute kidney injury risk in traumatic brain injury.

Journal: Scientific reports

Status: data only, 1 dataset cited

Wednesday, 3 June 2026 (1 paper)

[35] Code ↔ Paper doi:10.1186/s12974-026-03890-4 [paper, repository]

Neuronal toll-like receptor-4 regulation of matrix metalloproteinase-9 activity mediates dentate circuit dysfunction after traumatic brain injury.

Journal: Journal of neuroinflammation

Authors' code: Farrell-Laboratory/Toothy (MIT)

Status: code verified, 23 files readable

Thursday, 28 May 2026 (1 paper)

[36] doi:10.1186/s13195-026-02086-5 [paper, data]

Examining the additive risk of TBI and comorbid conditions on dementia in military veterans: a retrospective cohort study.

Journal: Alzheimer's research & therapy

Status: data only, 1 dataset cited

Wednesday, 27 May 2026 (1 paper)

[37] Code ↔ Paper doi:10.1038/s41467-026-73036-w [paper, repository]

Single-nucleus analysis reveals human-specific oligodendrocyte polarization and conserved neuronal responses after severe traumatic brain injury.

Journal: Nature communications

Authors' code: Zenodo 19314276 (CC-BY-4.0)

Status: code verified, 1 file readable

Saturday, 23 May 2026 (1 paper)

[38] Code ↔ Paper doi:10.1007/s10143-026-04341-7 [paper, repository]

The effect of intracranial pressure monitoring on severe traumatic brain injury patients who undergo subdural hematoma evacuation.

Journal: Neurosurgical review

Authors' code: cran.r-project.org/web/packages (no license)

Status: code verified

Thursday, 21 May 2026 (1 paper)

[39] doi:10.3389/fneur.2026.1848730 [paper, data]

Early prediction of incident delirium in traumatic brain injury: a multicenter validated and interpretable machine learning approach.

Journal: Frontiers in neurology

Status: data only, 4 datasets cited

Tuesday, 12 May 2026 (1 paper)

[40] Code ↔ Paper doi:10.1038/s41598-026-47942-4 [paper, repository]

CT-based radiomic markers to predict late-onset seizures after traumatic brain injury.

Journal: Scientific reports

Authors' code: makchow/NIFTIProcessing-Published (no license)

Status: code verified, 4 files readable, 3 matches

Sunday, 10 May 2026 (1 paper)

[41] doi:10.3390/ijms27104248 [paper, data]

Extracellular Vesicle and Plasma miRNAs as Candidate Biomarkers of Traumatic Brain Injury in the Context of Polytrauma.

Journal: International journal of molecular sciences

Status: data only, 1 dataset cited

Wednesday, 6 May 2026 (2 papers)

[42] Code ↔ Paper doi:10.1371/journal.pone.0345651 [paper, repository]

Non-concussive head impacts sustained during American football correlate with changes in gut microbiome diversity and composition.

Journal: PloS one

Authors' code: aziz-zafar/TBI-Microbiome (no license)

Status: code verified, 6 files readable, 12 matches

[43] Code ↔ Paper doi:10.1016/j.nicl.2026.104003 [paper, repository]

Contusions bias cortical thickness estimates after traumatic brain injury: A TRACK-TBI study.

Journal: NeuroImage. Clinical

Authors' code: dbrennan44/ANTsNetCT-Cortical-Thickness-with-Contusion-Post-Processing (no license)

Status: code verified, 2 files readable, 1 match

Tuesday, 5 May 2026 (1 paper)

[44] doi:10.1002/hsr2.72247 [paper, data]

Epidemiology of Traumatic Brain Injury in Medicare Beneficiaries over the Last Decade: A Retrospective Observational Study.

Journal: Health science reports

Status: data only, 1 dataset cited

Saturday, 2 May 2026 (1 paper)

[45] doi:10.1016/j.lanepe.2026.101693 [paper, data]

Absolute risk of acquired brain injury and rehabilitation needs in Denmark, 2014-2023: a population-based prospective cohort study.

Journal: The Lancet regional health. Europe

Status: data only, 1 dataset cited

Friday, 1 May 2026 (1 paper)

[46] doi:10.1002/cbf.70231 [paper]

Neuroglial Response to High-Amplitude, Short-Duration Pressure Transients in Monoculture.

Journal: Cell biochemistry and function

Status: code on request

Monday, 20 April 2026 (1 paper)

[47] doi:10.1186/s13054-026-06030-9 [paper]

Autoregulation-guided intracranial pressure and cerebral perfusion pressure targets in different subtypes and characteristics of traumatic brain injury.

Journal: Critical care (London, England)

Status: code on request

Tuesday, 14 April 2026 (1 paper)

[48] doi:10.1016/j.arrct.2026.100624 [paper, data]

Variability of the Behavioral Assessment Screening Tool for Mobile Health Using Ecological Momentary Assessment in Chronic Traumatic Brain Injury.

Journal: Archives of rehabilitation research and clinical translation

Status: data only, 1 dataset cited

Thursday, 9 April 2026 (1 paper)

[49] doi:10.1186/s12964-026-02871-7 [paper]

Hematopoietic cell kinase regulates microglial/macrophage activation to drive neuroinflammation after traumatic brain injury.

Journal: Cell communication and signaling : CCS

Status: data only

Monday, 6 April 2026 (1 paper)

[50] Code ↔ Paper doi:10.1093/braincomms/fcag123 [paper, repository]

Traumatic brain injury recovery prediction by harmonizing real brain CT and synthetic brain MRI: a pilot study.

Journal: Brain communications

Authors' code: SoloChe/TBI-Recovery-Prediction-Harmonization (no license)

Status: code verified, 38 files readable, 2 matches

Thursday, 2 April 2026 (1 paper)

[51] doi:10.1172/jci196112 [paper, data]

Aging-dependent microglial heterogeneity worsens outcomes in models of traumatic brain injury.

Journal: The Journal of clinical investigation

Status: data only, 1 dataset cited

Wednesday, 1 April 2026 (1 paper)

[52] Code ↔ Paper doi:10.1002/hbm.70534 [paper, repository]

Longitudinal Multimodal Neuroimaging After Traumatic Brain Injury.

Journal: Human brain mapping

Authors' code: anaradanovic/MultiMod_TBI (no license)

Status: code verified, 27 files readable

2025 (1 paper)

[53] doi:10.1016/j.isci.2025.114575 [paper]

Reduced cortical excitability is associated with head impact severity and cognitive symptoms in adolescent football players

Journal: —

Status: code on request