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Brain-wide information flow dynamics during novel visual processing in humans.

Code ↔ Paper

5 matches between paragraphs of the paper and lines of its authors' code, computed by the harvester (lexical-v1). Click a colored paragraph or line to see its counterpart.

The 5 matches · all tie a paragraph to a whole file, not to given lines: weak matches, whose lines are not tinted
  1. [1] § Results ↔ Figure_3/Figure_3B.m, the whole file · a weak match · score 0.53 · PHC FG, PreC, 239 ms, TC, FC, PC
  2. [2] § Results ↔ Figure_4/Figure_4B.m, the whole file · a weak match · score 0.53 · PHC FG, PreC, 239 ms, TC, FC, PC
  3. [3] § Results ↔ Figure_S2/Figure_S2C.m, the whole file · a weak match · score 0.53 · place active, PHC FG, PreC, MFG, latencies, AMY
  4. [4] § Results ↔ Figure_S2/Figure_S2B.m, the whole file · a weak match · score 0.52 · face active, PHC FG, PreC, MFG, latencies, AMY
  5. [5] § Results ↔ Figure_S2/Figure_S2C.m, the whole file · a weak match · score 0.50 · place active, PHC FG, PreC, MFG, AMY, HIPP

Paper

Loaded from Europe PMC by your browser, not stored by OSCR: doi.org · Europe PMC

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The authors' code

MATLAB · 40 lines · 1.5 KB · CC-BY-4.0 · 2 matches

  1. %% Figure S2C
  2. % load data
  3. load('Figure_S2C.mat')
  5. % plot
  6. figure('Color','w','Position',[1200,400,500,500]);
  7. for n = 1:size(electrode_ind_all,1)
  8. mean_temp = []; sem_temp = [];
  9. Uni = unique(electrode_ind_all{n,1});
  10. for A=1:size(unique(electrode_ind_all{n,1}))
  11. Area = Uni(A); idx = ismember(electrode_ind_all{n,1},Area);
  12. latency = cell2mat(electrode_ind_all{n,2});
  13. plot_temp=latency(idx);
  14. mean_temp = [mean_temp;mean(plot_temp)];
  15. if length(plot_temp) >= 3
  16. sem_temp = [sem_temp;std(plot_temp')/sqrt(length(plot_temp'))];%sem
  17. else
  18. sem_temp = [sem_temp;nan];
  19. end
  20. end
  21. scatter(unique(electrode_ind_all{n,1})',mean_temp,60,[1,1,1]*0.10*n,'filled','jitter', 'off', 'marker','o');hold on;%
  22. errorbar(unique(electrode_ind_all{n,1})',mean_temp,sem_temp,'linewidth',2,'color',[1 1 1]*0.10*n,'capsize',0);
  23. end
  25. set(gca,'Xlim',[0.5 11.5],'XTick',1:1:11,'TickDir','out');
  26. set(gca,'Ylim',[0 800],'YTick',0:200:800);
  27. set(gca,'Xticklabels',{'OC','PreC','IPL','SPL','PHC&FG','LTL','MFG','IFG','SFG','HIPP','AMY'},'FontSize', 10);
  28. ylabel('Latency (ms)','FontSize', 13)
  29. title('Place-active')
  30. view(90,-90);box off;
  32. % colorbar
  33. figure('Color','w','Position',[1400 400 400 200]);
  34. caxis([0 1]);
  35. colormap(flipud(gray));
  36. cb = colorbar('Location','south');
  37. set(cb, 'ytick', linspace(0, 1, 2), 'yticklabel',{1,n},'fontsize',13);
  38. axis off;
  39. cb.Label.String = 'Subjects';
  40. cb.Label.FontSize = 12;

Figure_S2C.m, under CC-BY-4.0 · at the source

Overview

Authors: Wushuang Huang1,2, Jianping Song1, Jingru Huangfu3, Shanshan Liang4, Zhiji Wang1, Xiang Liao5, Chunqing Zhang1, Xiaowei Chen4,6, Rongdi Yuan2, Lukang Wang1
ORCID iDs: Wushuang Huang, Jianping Song, Xiang Liao, Xiaowei Chen, Rongdi Yuan, Lukang Wang
  1. Department of Neurosurgery, Epilepsy Research Center of PLA, Xinqiao Hospital, Third Military Medical University, Chongqing, China
  2. Department of Ophthalmology, Xinqiao Hospital, Third Military Medical University, Chongqing, China
  3. Department of Ophthalmology, Daping Hospital, Third Military Medical University, Chongqing, China
  4. Brain Research Center and State Key Laboratory of Trauma, Burns, and Combined Injury, Third Military Medical University, Chongqing, China
  5. Center for Neurointelligence, School of Medicine, Chongqing University, Chongqing, China
  6. Chongqing Institute for Brain and Intelligence, Guangyang Bay Laboratory, Chongqing, China
Institutions: Army Medical University (China); Xinqiao Hospital (China); Daping Hospital (China); Chongqing University (China); Chongqing Institute for Brain and Intelligence (China)
Journal: Communications biology, volume 9, issue 1, article 1047
Dates: received 5 May 2025; accepted 5 May 2026; published online 18 May 2026
Type: Research article · Language: English
License: CC BY-NC-ND
Identifiers: DOI 10.1038/s42003-026-10262-4 · PMID 42144472 · PMCID PMC13443792 · OpenAlex W7161507554
Open access: gold, a free copy (OpenAlex)
Status: code verified
Categories: EEG (modality), human (organism)
Methods: Spectral & time-frequency, Preprocessing, Connectivity, Statistics, Machine learning, fMRI & imaging, Evoked potentials
Keywords: Object vision, Pattern vision
MeSH: Brain*, Visual Perception*, Adult, Brain Mapping, Electroencephalography, Female, Humans, Male, Photic Stimulation, Visual Pathways, Young Adult (* major topic)
Topic: Visual perception and processing mechanisms (Cognitive Neuroscience, Neuroscience), according to OpenAlex
Funding: National Natural Science Foundation of China (National Science Foundation of China) (82171463)
Citations: cited by 1 paper (Europe PMC); 46 references in the paper

Abstract

The abstract is not reproduced here: the paper's license (CC BY-NC-ND) does not allow it. Read it in the paper, at the publisher or on Europe PMC.

Repository

Its files are read in the Code ↔ Paper reader above, with 5 matches between paragraphs and lines of code.

Zenodo 19643440

License: CC-BY-4.0
State: the link answers, verified on 28 September 2026
Evidence: files inventoried
Size: 1 file
Software Heritage: not checked
Found in: “Code availability”
Not found: README, license file, CITATION.cff, environment file, tests, continuous integration, documentation
Tools: Statistics and Machine Learning Toolbox (10 files)
Availability: 1 check, the latest on 28 September 2026: the link answers (HTTP 200)
  • 28 September 2026: the link answers (HTTP 200)
22 files
At the source:

Code availability statement

The paper has a code availability statement. Its license (CC BY-NC-ND) does not allow reproducing it here; in short, from what the harvester recognized in it:

  • it points to the authors' code: Zenodo 19643440
  • it says that the code is available on request

Read it in the paper: doi.org/10.1038/s42003-026-10262-4.

Tracing map

Proposed by the machine: these links were found in the paper and verified at the source, without human review. The map will receive a Zenodo DOI once one of the paper's authors has validated it with their ORCID.

What the map holds:

  • 1 repository of the authors' code, each at its verified commit, with its license and how the link was found in the paper;
  • 21 scripts, each with its path and the digest of its content;
  • 5 matches between paragraphs of the paper and lines of the code (method lexical-v1);
  • neither the text of the paper nor the code itself.

Its JSON (tracing-map.json) is deposited on Zenodo with its DOI once the map is validated.

Data

No dataset and no data link were found in the paper.

Data availability statement

The paper has a data availability statement. Its license (CC BY-NC-ND) does not allow reproducing it here; in short, from what the harvester recognized in it:

  • no repository, dataset or request procedure was recognized in it

Read it in the paper: doi.org/10.1038/s42003-026-10262-4.

Versions

The history of this record: each version stored by the harvester or made by a correction of its authors or of the maintainers of its code, and what changed in its facts. The texts of the paper (its abstract, its availability statements) are not part of it; versions that changed only those are not listed.

Version 1, 28 September 2026: the first record

Recorded: type, language, journal, volume, issue, pages, dates, 10 authors, 2 keywords, 11 MeSH terms, 1 funder, 44 references.

Cite

This paper

Huang, W., Song, J., Huangfu, J., Liang, S., Wang, Z., Liao, X., Zhang, C., Chen, X., Yuan, R., & Wang, L. (2026). Brain-wide information flow dynamics during novel visual processing in humans. Communications biology, 9(1), 1047. https://doi.org/10.1038/s42003-026-10262-4

BibTeX

@article{huang2026brain,
author = {Huang, Wushuang and Song, Jianping and Huangfu, Jingru and Liang, Shanshan and Wang, Zhiji and Liao, Xiang and Zhang, Chunqing and Chen, Xiaowei and Yuan, Rongdi and Wang, Lukang},
title = {{Brain-wide information flow dynamics during novel visual processing in humans}},
journal = {Communications biology},
year = {2026},
month = may,
volume = {9},
number = {1},
pages = {1047},
publisher = {Nature Publishing Group},
issn = {2399-3642},
doi = {10.1038/s42003-026-10262-4},
url = {https://doi.org/10.1038/s42003-026-10262-4},
pmid = {42144472},
pmcid = {PMC13443792}
}

RIS

TY - JOUR
AU - Huang, Wushuang
AU - Song, Jianping
AU - Huangfu, Jingru
AU - Liang, Shanshan
AU - Wang, Zhiji
AU - Liao, Xiang
AU - Zhang, Chunqing
AU - Chen, Xiaowei
AU - Yuan, Rongdi
AU - Wang, Lukang
TI - Brain-wide information flow dynamics during novel visual processing in humans
T2 - Communications biology
J2 - Commun Biol
PY - 2026
DA - 2026/05/18
VL - 9
IS - 1
SP - 1047
SN - 2399-3642
PB - Nature Publishing Group
DO - 10.1038/s42003-026-10262-4
UR - https://doi.org/10.1038/s42003-026-10262-4
LA - en
ER -

CSL-JSON

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"id": "10.1038/s42003-026-10262-4",
"type": "article-journal",
"title": "Brain-wide information flow dynamics during novel visual processing in humans",
"container-title": "Communications biology",
"author": [
{
"family": "Huang",
"given": "Wushuang"
},
{
"family": "Song",
"given": "Jianping"
},
{
"family": "Huangfu",
"given": "Jingru"
},
{
"family": "Liang",
"given": "Shanshan"
},
{
"family": "Wang",
"given": "Zhiji"
},
{
"family": "Liao",
"given": "Xiang"
},
{
"family": "Zhang",
"given": "Chunqing"
},
{
"family": "Chen",
"given": "Xiaowei"
},
{
"family": "Yuan",
"given": "Rongdi"
},
{
"family": "Wang",
"given": "Lukang"
}
],
"container-title-short": "Commun Biol",
"volume": "9",
"issue": "1",
"page": "1047",
"DOI": "10.1038/s42003-026-10262-4",
"PMID": "42144472",
"PMCID": "PMC13443792",
"ISSN": "2399-3642",
"publisher": "Nature Publishing Group",
"URL": "https://doi.org/10.1038/s42003-026-10262-4",
"language": "en",
"issued": {
"date-parts": [
[
2026,
5,
18
]
]
}
}

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