MRI derived hippocampal asymmetry identifies hippocampal sclerosis in epilepsy surgical specimens.
Overview
- Department of Neurology, University of Rochester, School of Medicine and Dentistry, Rochester, NY, USA
- Department of Neurology, University of Pennsylvania, Perelman School of Medicine, Philadelphia, PA, USA
- Department of Biostatistics, Epidemiology, and Informatics, Penn Statistics in Imaging and Visualization Center, Center for AI and Data Science for Integrated Diagnostics, University of Pennsylvania, Perelman School of Medicine, Philadelphia, PA, USA
Abstract
Hippocampal sclerosis is the most common histopathological diagnosis in epilepsy surgical specimens. Although hippocampal sclerosis can be identified in vivo with brain MRI, it cannot be detected by expert qualitative review in as many as 50% of cases. Quantitative features derived from structural brain MRI, such as hippocampal shape, volume, and asymmetry features, show promise in identification of hippocampal sclerosis in vivo but have had limited translation to clinical practice partly due to the need for large normative cohorts for estimation of hippocampal pathology. Using the Imaging Database for Epilepsy And Surgery cohort, which includes brain MRI scans from 442 individuals with drug-resistant focal epilepsy who underwent epilepsy surgery and 100 healthy controls acquired on multiple scanners, we evaluated the diagnostic performance of the hippocampal asymmetry index calculated using only the participant’s hippocampal volumes against a gold standard histopathological diagnosis of hippocampal sclerosis. The hippocampal asymmetry index had high diagnostic performance (area under the curve for left hippocampal sclerosis = 0.95 (95% confidence interval 0.92–0.97); right hippocampal sclerosis = 0.96 (95% confidence interval 0.94–0.98) and was similar regardless of segmentation algorithm, data harmonization, and use of normative data. To facilitate validation, we provide an open-source software tool for the calculation of the hippocampal asymmetry index.
Reproduced under the paper's license (CC BY), from the paper cited above.
Code
No file of the authors' code could be read here: it is described below, and read at its source.
phindagijimana.github.io/neuroinsight_landing_web
Availability: 1 check, the latest on 27 September 2026: the link answers (HTTP 200)
- 27 September 2026: the link answers (HTTP 200)
The paper's code and data availability statement is in the Data section.
Tracing map
Proposed by the machine: these links were found in the paper and verified at the source, without human review. The map will receive a Zenodo DOI once one of the paper's authors has validated it with their ORCID.
What the map holds:
- 1 repository of the authors' code, each at its verified commit, with its license and how the link was found in the paper;
- 0 scripts, each with its path and the digest of its content;
- no match between paragraphs and code yet;
- neither the text of the paper nor the code itself.
Its JSON (tracing-map.json) is deposited on Zenodo with its DOI once the map is validated.
Data
No dataset and no data link were found in the paper.
Data availability
As described in the original publication,10 the data used in this manuscript are publicly available at: https://
Reproduced under the paper's license (CC BY), from the paper cited above.
Versions
The history of this record: each version stored by the harvester or made by a correction of its authors or of the maintainers of its code, and what changed in its facts. The texts of the paper (its abstract, its availability statements) are not part of it; versions that changed only those are not listed.
Version 1, 27 September 2026: the first record
Recorded: type, language, journal, volume, issue, pages, dates, 4 authors, 5 keywords, 1 funder, 14 references.
Cite
This paper
Ndagijimana, P., Brennan, D., Shinohara, R. T., & Gugger, J. J. (2026). MRI derived hippocampal asymmetry identifies hippocampal sclerosis in epilepsy surgical specimens. Brain communications, 8(4), fcag320. https://
BibTeX
@article{ndagijimana2026
author = {Ndagijimana, Philbert and Brennan, Daniel and Shinohara, Russell T and Gugger, James J},
title = {{MRI derived hippocampal asymmetry identifies hippocampal sclerosis in epilepsy surgical specimens}},
journal = {Brain communications},
year = {2026},
month = aug,
volume = {8},
number = {4},
pages = {fcag320},
publisher = {Oxford University Press},
issn = {2632-1297},
doi = {10.1093/
url = {https://
pmid = {42676852},
pmcid = {PMC13527870}
}
RIS
TY - JOUR
AU - Ndagijimana, Philbert
AU - Brennan, Daniel
AU - Shinohara, Russell T
AU - Gugger, James J
TI - MRI derived hippocampal asymmetry identifies hippocampal sclerosis in epilepsy surgical specimens
T2 - Brain communications
J2 - Brain Commun
PY - 2026
DA - 2026/
VL - 8
IS - 4
SP - fcag320
SN - 2632-1297
PB - Oxford University Press
DO - 10.1093/
UR - https://
LA - en
ER -
CSL-JSON
{
"id": "10.1093/
"type": "article-journal",
"title": "MRI derived hippocampal asymmetry identifies hippocampal sclerosis in epilepsy surgical specimens",
"container-title": "Brain communications",
"author": [
{
"family": "Ndagijimana",
"given": "Philbert"
},
{
"family": "Brennan",
"given": "Daniel"
},
{
"family": "Shinohara",
"given": "Russell T"
},
{
"family": "Gugger",
"given": "James J"
}
],
"container-title-short":
"volume": "8",
"issue": "4",
"page": "fcag320",
"DOI": "10.1093/
"PMID": "42676852",
"PMCID": "PMC13527870",
"ISSN": "2632-1297",
"publisher": "Oxford University Press",
"URL": "https://
"language": "en",
"issued": {
"date-parts": [
[
2026,
8,
21
]
]
}
}
The tracing map gets a citation of its own once an author has validated it and it has a DOI.
Similar papers
The papers with a page that share the most with this one: the tools found in their code, their categories, datasets, cited references and authors, the rarest counting most.
- [1] doi:10.1007/s00415-026-13850-w
- No link between piriform cortex subregion resection and seizure freedom in two cohorts with temporal lobe epilepsy.Journal: Journal of neurologyIn common: epilepsy, structural MRI / diffusion, 2 references
- [2] doi:10.1007/s00234-026-04103-8 [code]
- Enhanced detection of subtle cortical abnormalities in focal epilepsy using 7 T MRI surface-based models and graph neural networks.Journal: NeuroradiologyIn common: epilepsy, structural MRI / diffusion, 2 references
- [3] doi:10.1002/epi4.70336 [code]
- Quantifying extra-lesional interhemispheric cortical asymmetry in focal cortical dysplasia type II.Journal: Epilepsia openIn common: epilepsy, structural MRI / diffusion, clinical / translational, 1 reference
- [4] doi:10.1002/epi.70254
- Use of artificial intelligence in magnetic resonance imaging across the epileptic patient's journey: A meta-analysis of four clinical applications.Journal: EpilepsiaIn common: epilepsy, structural MRI / diffusion, clinical / translational, 1 reference
- [5] doi:
- Structural and Quantitative MRI Signal Features in Pediatric Focal Cortical Dysplasia: Clinical Relevance.Journal: Physiological researchIn common: epilepsy, structural MRI / diffusion, clinical / translational, 1 reference
- [6] doi:10.1038/s41597-026-07540-5
- A multimodal epilepsy dataset of paired 3-Tesla and 7-Tesla MRI and intracranial EEG.Journal: Scientific dataIn common: epilepsy, structural MRI / diffusion, 1 reference
- [7] doi:10.1186/s40708-026-00299-w
- Pipeline evaluation of a state-of-the-art AI algorithm for detection of focal cortical dysplasia: insights into potential failure sources.Journal: Brain informaticsIn common: epilepsy, structural MRI / diffusion, 1 reference
- [8] doi:10.1093/braincomms/fcag253 [code]
- Disease detection and classification in temporal lobe epilepsy: step-wise versus simultaneous AI decision models in a multisite neuroimaging study.Journal: Brain communicationsIn common: epilepsy, structural MRI / diffusion, clinical / translational, 1 reference
- [9] doi:10.1016/j.isci.2026.117446 [code]
- Volume-inflation registration (INFREG) for morphometric analysis of human focal cortical dysplasia type II.Journal: iScienceIn common: epilepsy, structural MRI / diffusion, 1 reference
- [10] doi:10.1002/hbm.70627 [code]
- Investigating the Contribution of Molecular-Enriched Functional Connectivity to Brain-Age Analysis.Journal: Human brain mappingIn common: structural MRI / diffusion, 2 references
Contribute
The authors of this paper can claim it, correct its record and validate its tracing map, and the maintainers of its code (its owner, or a public member of its organization) correct what it says of their repository; anyone signed in can ask for its removal. Every request goes to OSCR's own machine, which answers it; your account page follows them.
Sign in with ORCID to claim this paper as one of its authors, correct its record or validate its tracing map: when the paper's metadata lists your ORCID iD, you are recognized at once. Maintainers of its code: sign in with GitHub, then claim the repository on your account page.
Claim this paper
Correct its record
Say what each link of this record is, remove the ones that are not the paper's, add the ones that are missing. The correction becomes a new version of the record, in its Versions section.
Validate its tracing map
You validate the map as this page shows it: 1 repository of the authors' code, each at its verified commit and with its license, 0 scripts, and 0 matches between paragraphs and code (see the Code and Map sections). It then receives a DOI on Zenodo, with you (your ORCID iD) and OSCR as its creators; the code itself is not deposited.
The map's fingerprint: sha256:434f1ef4e5298f2e…
Add the badge to its README
The badge links the code to this page. Copy one of these into the README of the paper's code: only you decide where it goes, and nothing is changed for you.
Markdown
[.
Discussion, reproductions, activity
Discussion: questions and error reports about this paper and its code, from signed-in readers and its authors. It opens with sign-in.
Reproductions: reports from readers who ran the authors' code: what they reproduced, with which environment, commit and data. It opens with sign-in.
Activity: what happens around this paper: new versions of its record, its map's validation, discussions and reproductions. It opens with sign-in.
