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Neuronal avalanches as a predictive biomarker for guiding tailored BCI training programs.

Code ↔ Paper

8 matches between paragraphs of the paper and lines of its authors' code, computed by the harvester (lexical-v1). Click a colored paragraph or line to see its counterpart.

The 8 matches
  1. [1] § Materials and Methods › Predictive models ↔ LSVR_model.py, lines 37–114 · score 0.92 · temporal weight vector, Gram matrix, dual variables, Longitudinal Support Vector, temporal trends, insensitive
  2. [2] § Materials and Methods › Predictive models ↔ LSVR_model.py, lines 37–114 · score 0.81 · temporal trend vector, dual coefficients, dual variables, support vectors, QP, linear
  3. [3] § Materials and Methods › Predictive models ↔ LSVC_model.py, lines 95–176 · score 0.74 · temporal trend vector, dual coefficients, support vectors, QP, linear, iterative
  4. [4] § Materials and Methods › Predictive models ↔ LSVC_model.py, lines 27–93 · score 0.73 · Gram matrix, Longitudinal Support Vector, temporal trends, QP, dual, model
  5. [5] § Results › Prediction results › BCI performance prediction ↔ LSVR_model.py, lines 567–648 · score 0.70 · Square Error, LSVR model, continuous predicted, BCI score, RMSE, shuffled
  6. [6] § Materials and Methods › Predictive models ↔ LSVC_model.py, lines 27–93 · score 0.63 · Longitudinal Support Vector, temporal trend, LSVC, Classifier, model, matrix
  7. [7] § Materials and Methods › Predictive models ↔ LSVC_model.py, lines 95–176 · score 0.56 · dual coefficients, LSVC, linear, iterative, temporal, matrix
  8. [8] § Results › Prediction results ↔ LSVC_model.py, lines 528–573 · score 0.53 · Support Vector Classifier, classification model, BCI score, LSVC, longitudinal, predictive

Paper

Loaded from Europe PMC by your browser, not stored by OSCR: doi.org · Europe PMC

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The authors' code

Python · 754 lines · 34 KB · no license · 5 matches

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It can be read at the source: LSVC_model.py.

Overview

  1. Sorbonne Université, Paris Brain Institute-ICM, CNRS, Inria, Inserm, AP-HP, Hôpital de la Pitié Salpêtrière, Paris, France
  2. Institut de Neurosciences des Systèmes, Aix-Marseille Université, Marseille, France
  3. Department of Biomedical Sciences, University of Sassari, Sassari, Italy
Journal: Imaging neuroscience (Cambridge, Mass.), volume 4, article IMAG.a.1259
Dates: received 12 August 2025; accepted 4 May 2026; published online 29 May 2026
Type: Research article · Language: English
License: CC BY
Identifiers: DOI 10.1162/imag.a.1259 · PMID 42232076 · PMCID PMC13224313 · OpenAlex W4411036309
Open access: diamond, a free copy (OpenAlex)
Status: code verified
Categories: EEG (modality), clinical / translational (subfield)
Methods: Spectral & time-frequency, Connectivity, Statistics, Smoothing, state filtering, decompositions, Machine learning, Preprocessing, fMRI & imaging, Single-unit activity, calcium imaging
Keywords: neuronal avalanches, Brain-Computer Interface (BCI), motor imagery, Electroencephalography (EEG), task-condition effect, learning effect, BCI-score repeated correlation, longitudinal predictive model, personalized training protocol
Topic: EEG and Brain-Computer Interfaces (Cognitive Neuroscience, Neuroscience), according to OpenAlex
Citations: not cited yet (Europe PMC); 50 references in the paper

Abstract

Motor imagery-based Brain-Computer Interfaces (BCIs) restore control in persons with motor impairments, but up to 30% of users struggle, a phenomenon known as “BCI inefficiency”. This study tackles a key limitation of current protocol: the use of fixed-length sessions training paradigms that ignore individual learning variability. We propose a novel approach based on neuronal avalanches, spatiotemporal cascades of brain activities, as biomarkers to characterize and predict user-specific learning. From electroencephalography data across four sessions in 20 subjects, we characterized avalanches by their length and their spatiotemporal size. These features showed significant training and task effects and were found to correlate to BCI performance across sessions. We further assessed their ability to predict BCI success through longitudinal models, achieving up to 91% accuracy, improved by spatial filtering on selected brain regions. These findings demonstrate the utility of neuronal avalanche dynamics as robust biomarkers for BCI training, supporting the development of personalized protocols aimed at mitigating BCI illiteracy.

Reproduced under the paper's license (CC BY), from the paper cited above.

Repository

Its files are read in the Code ↔ Paper reader above, with 8 matches between paragraphs and lines of code.

CamiMannino/Neuronal-avalanches-as-a-predictive-biomarker-for-guiding-tailored-BCI-training-programs

License: none: the authors keep all their rights
State: the link answers, verified on 28 September 2026
Evidence: files inventoried
Commit: 45a88f8b7911f116d0359b5433c72acd2bd05636, 11 August 2025
Languages: Python (9)
Size: 10 files, 9 scripts
Software Heritage: not archived
Found in: “Data and Code Availability”
Holds: README
Not found: license file, CITATION.cff, environment file, tests, continuous integration, documentation
Tools: Matplotlib (9 files), NumPy (9 files), MNE-Python (7 files), SciPy (7 files), statsmodels (7 files), pandas (6 files), scikit-learn (6 files), seaborn (6 files), Pingouin (4 files)
Availability: 1 check, the latest on 28 September 2026: the link answers
  • 28 September 2026: the link answers
10 files, not copied: shown from their source

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The paper's code and data availability statement is in the Data section.

Tracing map

Proposed by the machine: these links were found in the paper and verified at the source, without human review. The map will receive a Zenodo DOI once one of the paper's authors has validated it with their ORCID.

What the map holds:

  • 1 repository of the authors' code, each at its verified commit, with its license and how the link was found in the paper;
  • 9 scripts, each with its path and the digest of its content;
  • 8 matches between paragraphs of the paper and lines of the code (method lexical-v1);
  • neither the text of the paper nor the code itself.

Its JSON (tracing-map.json) is deposited on Zenodo with its DOI once the map is validated.

Data

No dataset and no data link were found in the paper.

Data and Code Availability

The study dataset has been fully collected and curated. A dedicated data-descriptor paper is currently in preparation; upon its acceptance, the de-identified dataset and full documentation will be deposited in an open repository with a citable DOI and made publicly available. Until release, controlled access may be granted on reasonable request to the corresponding author.

Code used to import data, analyse data, and generate manuscript figures are available on GitHub: https://github.com/CamiMannino/Neuronal-avalanches-as-a-predictive-biomarker-for-guiding-tailored-BCI-training-programs.

Reproduced under the paper's license (CC BY), from the paper cited above.

Versions

The history of this record: each version stored by the harvester or made by a correction of its authors or of the maintainers of its code, and what changed in its facts. The texts of the paper (its abstract, its availability statements) are not part of it; versions that changed only those are not listed.

Version 1, 28 September 2026: the first record

Recorded: type, language, journal, volume, pages, dates, 4 authors, 9 keywords, 49 references.

Cite

This paper

Mannino, C., Sorrentino, P., Chavez, M., & Corsi, M.-C. (2026). Neuronal avalanches as a predictive biomarker for guiding tailored BCI training programs. Imaging neuroscience (Cambridge, Mass.), 4, IMAG.a.1259. https://doi.org/10.1162/imag.a.1259

BibTeX

@article{mannino2026neuronal,
author = {Mannino, Camilla and Sorrentino, Pierpaolo and Chavez, Mario and Corsi, Marie-Constance},
title = {{Neuronal avalanches as a predictive biomarker for guiding tailored BCI training programs}},
journal = {Imaging neuroscience (Cambridge, Mass.)},
year = {2026},
month = may,
volume = {4},
pages = {IMAG.a.1259},
publisher = {MIT Press},
issn = {2837-6056},
doi = {10.1162/imag.a.1259},
url = {https://doi.org/10.1162/imag.a.1259},
pmid = {42232076},
pmcid = {PMC13224313}
}

RIS

TY - JOUR
AU - Mannino, Camilla
AU - Sorrentino, Pierpaolo
AU - Chavez, Mario
AU - Corsi, Marie-Constance
TI - Neuronal avalanches as a predictive biomarker for guiding tailored BCI training programs
T2 - Imaging neuroscience (Cambridge, Mass.)
J2 - Imaging Neurosci (Camb)
PY - 2026
DA - 2026/05/29
VL - 4
SP - IMAG.a.1259
SN - 2837-6056
PB - MIT Press
DO - 10.1162/imag.a.1259
UR - https://doi.org/10.1162/imag.a.1259
LA - en
ER -

CSL-JSON

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The tracing map gets a citation of its own once an author has validated it and it has a DOI.

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