OSCR

Body size and intracranial volume interact with the structure of the central nervous system: A multi-center in vivo neuroimaging study.

This page is built on request from the registry's record of the paper. The 6,000 most recent papers have a fuller page, built ahead of time, with the Code ↔ Paper reader, the tracing map and its validation, the record's versions, how to cite it and similar papers. This paper is older: its record, its code, its data and the requests about it are below.

Code

268 files of its code read; 15 matches between paragraphs and code. The Code ↔ Paper reader is built for the 6,000 most recent papers only: this paper's code is read at its source.

spine-generic/protocols

License: MIT
State: the link answers
Copies: kept by the registry: this license allows it

spinalcordtoolbox/spinalcordtoolbox

License: LGPL-3.0
State: the link answers
Copies: kept by the registry: this license allows it

spine-generic/spine-generic

License: MIT
State: the link answers
Copies: kept by the registry: this license allows it
Tools found in the code: DIPY, FSL, Statistics and Machine Learning Toolbox, Matplotlib, MONAI, NiBabel, nnU-Net, NumPy, OpenCV, pandas, Plotly, PyBIDS, PyTorch, RNifti, scikit-image, scikit-learn, SciPy, seaborn, statsmodels

Overview

Authors: René Labounek, Monica T. Bondy, Amy L. Paulson, Sandrine Bédard, Mihael Abramovic, Eva Alonso-Ortiz, Nicole T. Atcheson, Laura R. Barlow, Robert L. Barry, Markus Barth, Marco Battiston, Christian Büchel, Matthew D. Budde, Virginie Callot, Anna Combes, Benjamin De Leener, Maxime Descoteaux, Paulo Loureiro de Sousa, Marek Dostál, Julien Doyon
and 73 other authorsAdam V. Dvorak, Falk Eippert, Karla R. Epperson, Kevin S. Epperson, Patrick Freund, Jürgen Finsterbusch, Alexandru Foias, Michela Fratini, Issei Fukunaga, Claudia A.M. Gandini Wheeler-Kingshott, GianCarlo Germani, Guillaume Gilbert, Federico Giove, Francesco Grussu, Akifumi Hagiwara, Pierre-Gilles Henry, Tomáš Horák, Masaaki Hori, James M. Joers, Kouhei Kamiya, Haleh Karbasforoushan, Miloš Keřkovský, Ali Khatibi, Joo-won Kim, Nawal Kinany, Hagen Kitzler, Shannon Kolind, Yazhuo Kong, Petr Kudlička, Paul Kuntke, Nyoman D. Kurniawan, Slawomir Kusmia, Maria Marcella Laganà, Cornelia Laule, Christine S.W. Law, Tobias Leutritz, Yaou Liu, Sara Llufriu, Sean Mackey, Allan R. Martin, Eloy Martinez-Heras, Loan Mattera, Kristin P. O’Grady, Nico Papinutto, Daniel Papp, Deborah Pareto, Todd B. Parrish, Anna Pichiecchio, Ferran Prados, Àlex Rovira, Marc J. Ruitenberg, Rebecca S. Samson, Giovanni Savini, Maryam Seif, Alan C. Seifert, Alex K. Smith, Seth A. Smith, Zachary A. Smith, Elisabeth Solana, Yuichi Suzuki, George W Tackley, Alexandra Tinnermann, Jan Valošek, Dimitri Van De Ville, Marios C. Yiannakas, Kenneth A. Weber II, Nikolaus Weiskopf, Richard G. Wise, Patrik O. Wyss, Junqian Xu, Julien Cohen-Adad, Christophe Lenglet, Igor Nestrašil
Journal: Imaging neuroscience (Cambridge, Mass.)
Published: 7 May 2025
Type: Research article
Status: code verified (how the code is found and verified)
DOI: 10.1162/imag_a_00559
License: CC BY
Institutions: University of Minnesota (United States), Polytechnique Montréal (Canada), Swiss Paraplegic Center (Switzerland), CHU Sainte-Justine Research Center (Canada), Université de Montréal (Canada), The University of Queensland (Australia), University of British Columbia (Canada), Harvard University (United States), Massachusetts General Hospital (United States), Athinoula A. Martinos Center for Biomedical Imaging (United States), Massachusetts Institute of Technology (United States), National Hospital for Neurology and Neurosurgery (United Kingdom), UCL Queen Square Institute of Neurology (United Kingdom), University College London (United Kingdom), University Medical Center Hamburg-Eppendorf (Germany), Medical College of Wisconsin (United States), Milwaukee VA Medical Center (United States), Centre National de la Recherche Scientifique (France), Aix-Marseille Université (France), Centre de Résonance Magnétique Biologique et Médicale (France), Hôpital de la Timone (France), Université de Sherbrooke (Canada), Laboratoire des Sciences de l'Ingénieur, de l'Informatique et de l'Imagerie (France), Université de Strasbourg (France), Masaryk University (Czechia), University Hospital Brno (Czechia), Montreal Neurological Institute and Hospital (Canada), McGill University (Canada), Max Planck Institute for Human Cognitive and Brain Sciences (Germany), Stanford University (United States), Wellcome Centre for Human Neuroimaging (United Kingdom), University of Zurich (Switzerland), University Hospital Zurich (Switzerland), Universitätsklinik Balgrist (Switzerland), Fondazione Santa Lucia (Italy), Juntendo University (Japan), University of Pavia (Italy), Fondazione Istituto Neurologico Nazionale Casimiro Mondino (Italy), Philips (Canada) (Canada), Centro Ricerche Enrico Fermi (Italy), Vall d'Hebron Institute of Oncology (Spain), Central European Institute of Technology (Czechia), Central European Institute of Technology – Masaryk University (Czechia), Toho University Omori Medical Center (Japan), University of California, San Francisco (United States), University of Birmingham (United Kingdom), Baylor College of Medicine (United States), Icahn School of Medicine at Mount Sinai (United States), University of Geneva (Switzerland), École Polytechnique Fédérale de Lausanne (Switzerland), University Hospital Carl Gustav Carus (Germany), Technische Universität Dresden (Germany), Chinese Academy of Sciences (China), Institute of Psychology, Chinese Academy of Sciences (China), University of Chinese Academy of Sciences (China), St. Anne's University Hospital Brno (Czechia), IBM (United States) (United States), International Collaboration On Repair Discoveries (Canada), Capital Medical University (China), Beijing Tian Tan Hospital (China), Hospital Clínic de Barcelona (Spain), Consorci Institut D'Investigacions Biomediques August Pi I Sunyer (Spain), Universitat de Barcelona (Spain), Stanford Medicine (United States), University of California, Davis (United States), Vall d'Hebron Hospital Universitari (Spain), Vanderbilt University (United States), Vanderbilt University Medical Center (United States), University of Oxford (United Kingdom), Wellcome Centre for Integrative Neuroimaging (United Kingdom), Northwestern University (United States), Universitat Oberta de Catalunya (Spain), Humanitas University (Italy), IRCCS Humanitas Research Hospital (Italy), University of Oklahoma (United States), University of Tokyo Hospital (Japan), The University of Tokyo (Japan), Cardiff University (United Kingdom), Mila - Quebec Artificial Intelligence Institute (Canada), Palacký University Olomouc (Czechia), Leipzig University (Germany), University of Chieti-Pescara (Italy)
Categories: structural MRI / diffusion (modality), human (organism)

Data

Datasets cited

Contribute

The authors of this paper can claim it and correct its record, and the maintainers of its code (its owner, or a public member of its organization) correct what it says of their repository; anyone signed in can ask for its removal. Every request goes to the registry's own machine, which answers it; your account page follows them.

Sign in with ORCID to claim this paper as one of its authors or correct its record: when the paper's metadata lists your ORCID iD, you are recognized at once. Maintainers of its code: sign in with GitHub, then claim the repository on your account page.

Add the badge to the code's README

OSCR: the badge of this paper

Authors and maintainers of this paper's code: the badge says what OSCR knows of the paper and links the code to this page. Paste one of these under the README's title. Keep the two marks around it: they let the badge be replaced in place, never added twice. Nothing is changed for you.

Markdown
<!-- oscr-badge:start -->
[![OSCR](https://openscicode.org/badge/doi/10.1162/imag_a_00559.svg)](https://openscicode.org/badge/doi/10.1162/imag_a_00559)
<!-- oscr-badge:end -->
reStructuredText
.. oscr-badge:start

.. image:: https://openscicode.org/badge/doi/10.1162/imag_a_00559.svg
   :target: https://openscicode.org/badge/doi/10.1162/imag_a_00559
   :alt: OSCR

.. oscr-badge:end
HTML
<!-- oscr-badge:start -->
<a href="https://openscicode.org/badge/doi/10.1162/imag_a_00559"><img src="https://openscicode.org/badge/doi/10.1162/imag_a_00559.svg" alt="OSCR"></a>
<!-- oscr-badge:end -->

On GitHub, open the README, choose Edit (the pencil), paste the snippet under the title, then "Commit changes".

Or let it be kept for you, once you choose it: oscr badge --write from the command line, or the GitHub Action in your repository's workflows. Every other form is on the badge page.

Request its removal

To ask for this record, the copies of its authors' scripts or its tracing map to be removed, use the removal request page: signed in, you say who you are, what to remove and why, then review and confirm the request. Published rules decide every request (how).