OSCR

A novel spliceosomopathy caused by de novo SF3B3 variants.

This page is built on request from the registry's record of the paper. The 6,000 most recent papers have a fuller page, built ahead of time, with the Code ↔ Paper reader, the tracing map and its validation, the record's versions, how to cite it and similar papers. This paper is older: its record, its code, its data and the requests about it are below.

Code

209 files of its code read; 3 matches between paragraphs and code. The Code ↔ Paper reader is built for the 6,000 most recent papers only: this paper's code is read at its source.

ParmEd/ParmEd

License: none: the authors keep all their rights
State: the link answers
Copies: kept by the registry: this license allows it
Tools found in the code: NetworkX, NumPy, pandas, RDKit, SciPy

Overview

Authors: Luciana Musante, Pavel Janos, Giulia Pianigiani, Sara Cappelli, Alessandra Longo, Carolina Alves, Eva MC Schwaibold, Matias Wagner, Gregory Costain, Run Fridriksdottir, Kari Stefansson, Patrick Sulem, Klaske D Lichtenbelt, Ellen van Binsbergen, Richard H van Jaarsveld, Alfredo Brusco, Lisa Pavinato, Elisa Biamino, Alessandra Spano, Clara C Hildebrandt
and 29 other authorsYee-Ming Chan, Emily Groopman, Michal Berkenstadt, Daniel Koboldt, Rachel Williamson, Han G Brunner, Lisenka ELM Vissers, Pernille M Torring, Qin Hao, Bruce D Gelb, Elizabeth Goldmuntz, Kristen Reed, Emma C Bedoukian, Davide Vecchio, Emanuela Salzano, Maria Piccione, Caterina Zanus, Catia Mio, Evan E Eichler, Tianyun Wang, Wesley G Patterson, Kameryn M Butler, Mattie Piotrowski, Sandra Mercier, Benjamin Cogné, Ingrid M Wentzensen, Emanuele Buratti, Alessandra Magistrato, Flavio Faletra
Published: 19 February 2026
Type: Research article
Status: code verified (how the code is found and verified)
License: CC BY-NC-ND
Institutions: IRCCS Materno Infantile Burlo Garofolo (Italy), Scuola Internazionale Superiore di Studi Avanzati (Italy), Istituto Officina dei Materiali (Italy), National Research Council (Italy), International Centre for Genetic Engineering and Biotechnology (Italy), Heidelberg University (Germany), Helmholtz Munich (Germany), Institut für Humangenetik (Germany), Technical University of Munich (Germany), University of Toronto (Canada), Hospital for Sick Children (Canada), Sickkids Research Institute (Canada), deCODE Genetics (Iceland) (Iceland), University Medical Center Utrecht (Netherlands), Azienda Ospedaliera Citta' della Salute e della Scienza di Torino (Italy), University of Turin (Italy), Institute of Oncology Research (Switzerland), Università della Svizzera italiana (Switzerland), Ospedale Regina Margherita (Italy), University of North Carolina at Chapel Hill (United States), Broad Institute (United States), Boston Children's Hospital (United States), Harvard University (United States), Sheba Medical Center (Israel), Nationwide Children's Hospital (United States), Akron Children's Hospital (United States), Radboud University Nijmegen (Netherlands), Maastricht University Medical Centre (Netherlands), Radboud University Medical Center (Netherlands), Maastricht University (Netherlands), Odense University Hospital (Denmark), Icahn School of Medicine at Mount Sinai (United States), Children's Hospital of Philadelphia (United States), University of Pennsylvania (United States), Bambino Gesù Children's Hospital (Italy), University of Palermo (Italy), University of Udine (Italy), Howard Hughes Medical Institute (United States), University of Washington (United States), Peking University (China), Greenwood Genetic Center (United States), Centre National de la Recherche Scientifique (France), Inserm (France), Centre Hospitalier Universitaire de Nantes (France), Institut du Thorax (France), Nantes Université (France), Azienda sanitaria universitaria Friuli Centrale (Italy)

Data

No dataset cited, and no data link found.

Contribute

The authors of this paper can claim it and correct its record, and the maintainers of its code (its owner, or a public member of its organization) correct what it says of their repository; anyone signed in can ask for its removal. Every request goes to the registry's own machine, which answers it; your account page follows them.

Sign in with ORCID to claim this paper as one of its authors or correct its record: when the paper's metadata lists your ORCID iD, you are recognized at once. Maintainers of its code: sign in with GitHub, then claim the repository on your account page.

Add the badge to the code's README

OSCR: the badge of this paper

Authors and maintainers of this paper's code: the badge says what OSCR knows of the paper and links the code to this page. Paste one of these under the README's title. Keep the two marks around it: they let the badge be replaced in place, never added twice. Nothing is changed for you.

Markdown
<!-- oscr-badge:start -->
[![OSCR](https://openscicode.org/badge/doi/10.1186/s13073-026-01610-4.svg)](https://openscicode.org/badge/doi/10.1186/s13073-026-01610-4)
<!-- oscr-badge:end -->
reStructuredText
.. oscr-badge:start

.. image:: https://openscicode.org/badge/doi/10.1186/s13073-026-01610-4.svg
   :target: https://openscicode.org/badge/doi/10.1186/s13073-026-01610-4
   :alt: OSCR

.. oscr-badge:end
HTML
<!-- oscr-badge:start -->
<a href="https://openscicode.org/badge/doi/10.1186/s13073-026-01610-4"><img src="https://openscicode.org/badge/doi/10.1186/s13073-026-01610-4.svg" alt="OSCR"></a>
<!-- oscr-badge:end -->

On GitHub, open the README, choose Edit (the pencil), paste the snippet under the title, then "Commit changes".

Or let it be kept for you, once you choose it: oscr badge --write from the command line, or the GitHub Action in your repository's workflows. Every other form is on the badge page.

Request its removal

To ask for this record, the copies of its authors' scripts or its tracing map to be removed, use the removal request page: signed in, you say who you are, what to remove and why, then review and confirm the request. Published rules decide every request (how).