autism

Population: 121 papers with a page, 76 of them with their authors' code.

Monday, 21 September 2026 (1 paper)

[1] doi:10.7554/elife.109901 [paper, data]

Infants at high and low likelihood for autism show different EEG developmental trajectories in speech tracking and statistical learning.

Journal: eLife

Status: data only, 1 dataset cited

Tuesday, 15 September 2026 (1 paper)

[2] doi:10.1186/s13293-026-00982-x [paper, data]

Sex differences in ferroptosis-related vulnerability to autism-like deficits in the adolescent medial prefrontal cortex following embryonic valproic acid exposure.

Journal: Biology of sex differences

Status: data only, 1 dataset cited

Friday, 11 September 2026 (1 paper)

[3] Code ↔ Paper doi:10.1126/sciadv.aec9291 [paper, repository]

Computational mechanisms of perception in autism revealed using games inspired by rodent operant tasks.

Journal: Science advances

Authors' code: Zenodo 16998131 (CC0-1.0), Zenodo 20545339 (CC-BY-4.0), ratacad/geode_data (CC0-1.0), ratacad/geode (no license)

Status: code verified, 388 files readable, 9 matches

Thursday, 10 September 2026 (1 paper)

[4] Code ↔ Paper doi:10.1016/j.bbih.2026.101351 [paper, repository]

Associations between chronic placental inflammation, fetal brain development and later autism traits.

Journal: Brain, behavior, & immunity - health

Authors' code: Zenodo 14051966 (CC-BY-4.0), wheelocklab/networklevelanalysis (MIT)

Status: code verified, 197 files readable, 1 match

Thursday, 3 September 2026 (1 paper)

[5] doi:10.1016/j.isci.2026.117278 [paper]

Altered striatal long-term potentiation in the eIF4E-TG mouse model of autism spectrum disorder.

Journal: iScience

Status: code on request

Wednesday, 2 September 2026 (1 paper)

[6] Code ↔ Paper doi:10.1016/j.isci.2026.117412 [paper, repository]

Transcriptomic landscape of microglia in mouse models of social dysfunction and oxytocin-mediated recovery.

Journal: iScience

Authors' code: MasaTsurutani/Transcriptomic-Landscape-of-Microglia-in-Mouse-Models-of-Social-Dysfunction-and-Oxytocin-Mediated (no license)

Status: empty repository, 1 file readable

Tuesday, 1 September 2026 (3 papers)

[7] doi:10.1111/ejn.70673 [paper, data]

Reduced Motor Preparation and Altered EEG Signatures of Prediction in Autistic Adults.

Journal: The European journal of neuroscience

Status: data only, 2 datasets cited

[8] Code ↔ Paper doi:10.1093/cercor/bhag121 [paper, repository]

Preserved intrinsic neural timescale organization with hierarchical variation in autism spectrum disorder.

Journal: Cerebral cortex (New York, N.Y. : 1991)

Authors' code: shikauchiy/int-hierarchy-analysis (no license)

Status: code verified, 4 files readable, 5 matches

[9] Code ↔ Paper doi:10.1101/gr.280394.124 [paper, repository]

De novo structural variants in autism spectrum disorder disrupt distal regulatory interactions of neuronal genes.

Journal: Genome research

Authors' code: ketringjoni/SuPreMo (no license)

Status: code verified, 16 files readable, 7 matches

Thursday, 27 August 2026 (1 paper)

[10] doi:10.3390/diagnostics16172746 [paper]

Benchmarking Synolitic Graphs for Autism Classification from Multisite Resting-State fMRI.

Journal: Diagnostics (Basel, Switzerland)

Status: code on request

Tuesday, 25 August 2026 (1 paper)

[11] Code ↔ Paper doi:10.2196/84707 [paper, repository]

Wireless Electroencephalography in Research on Children With Developmental Disabilities: Scoping Review.

Journal: Journal of medical Internet research

Authors' code: Zenodo 21633946 (CC-BY-4.0)

Status: code verified

Monday, 24 August 2026 (1 paper)

[12] doi:10.1371/journal.pone.0355984 [paper]

An integrated systems biology and machine learning framework for identifying potential biomarkers and pathways in autism spectrum disorder.

Journal: PloS one

Status: data only

Wednesday, 19 August 2026 (1 paper)

[13] Code ↔ Paper doi:10.1038/s41467-026-76675-1 [paper, repository]

Long-read proteogenomic atlas of human neuronal differentiation reveals isoform diversity informing neurodevelopmental risk mechanisms.

Journal: Nature communications

Authors' code: gandallab/Dev_Brain_IsoSeq (no license), nuoxuxu/SFARI (MIT), Zenodo 16897532 (CC-BY-4.0)

Status: code verified, 293 files readable, 40 matches

Friday, 14 August 2026 (2 papers)

[14] Code ↔ Paper doi:10.1016/j.celrep.2026.117852 [paper, repository]

Graph theory identifies altered prefrontal microcircuit organization in Shank3 mice, a mouse Model of autism.

Journal: Cell reports

Authors' code: Zenodo 21490732 (CC-BY-4.0), liang-bo/AutoStereota (MIT)

Status: code verified, 62 files readable, 4 matches

[15] doi:10.2147/jmdh.s605039 [paper, data]

NeuroMimicNet: A Multimodal Neuromorphic Framework for Early Screening and Cognitive Pattern Recognition in Children with Autism.

Journal: Journal of multidisciplinary healthcare

Status: data only, 1 dataset cited

Thursday, 13 August 2026 (2 papers)

[16] doi:10.3390/ijms27167238 [paper, data]

<i>RFX3</i> Pathogenic Variants as a Rare Cause of Infantile Epileptic Spasms Syndrome.

Journal: International journal of molecular sciences

Status: data only, 1 dataset cited

[17] Code ↔ Paper doi:10.3389/fgene.2026.1799530 [paper, repository]

Sex-dependent prediction of autism.

Journal: Frontiers in genetics

Authors' code: Catriona-Miller/autism_ml (no license)

Status: code verified, 4 files readable, 1 match

Wednesday, 12 August 2026 (1 paper)

[18] Code ↔ Paper doi:10.3389/ftox.2026.1816944 [paper, repository]

Neurodevelopmental outcomes relevant to autism in juvenile mice exposed to PCB 11 in the maternal diet throughout gestation and lactation.

Journal: Frontiers in toxicology

Authors' code: Zenodo 19716216 (CC-BY-4.0)

Status: code verified, 4 files readable

Tuesday, 11 August 2026 (1 paper)

[19] doi:10.7554/elife.109083 [paper, data]

Spine nanostructure profiling of cultured neurons from mouse models reveals a schizophrenia-linked role for Ecrg4.

Journal: eLife

Status: data only, 1 dataset cited

Tuesday, 4 August 2026 (1 paper)

[20] doi:10.3389/fmicb.2026.1811435 [paper, data]

Research on the role of gut microbiota metabolites in autism by multi-omics and network pharmacology.

Journal: Frontiers in microbiology

Status: data only, 1 dataset cited

Saturday, 1 August 2026 (1 paper)

[21] Code ↔ Paper doi:10.1093/bioinformatics/btag601 [paper, repository]

SIMLINK enables accurate variant pathogenicity prediction through modeling the gene-variant-feature association structure.

Journal: Bioinformatics (Oxford, England)

Authors' code: Chen-LuWang/SIMLINK (no license), Zenodo 21802211 (CC-BY-4.0)

Status: code verified, 16 files readable, 3 matches

Wednesday, 29 July 2026 (1 paper)

[22] doi:10.1016/j.mocell.2026.100387 [paper, data]

USP15 mutation associated with autism spectrum disorder alters progenitor fate and neuronal maturation in human brain organoids.

Journal: Molecules and cells

Status: data only, 1 dataset cited

Tuesday, 28 July 2026 (1 paper)

[23] Code ↔ Paper doi:10.3389/fnins.2026.1795744 [paper, repository]

Structural brain alterations associated with brain age may link to social dysfunction in male adults with autism spectrum disorder.

Journal: Frontiers in neuroscience

Authors' code: james-cole/brainageR (LGPL-3.0)

Status: code verified, 9 files readable, 1 match

Monday, 27 July 2026 (3 papers)

[24] doi:10.1016/j.nicl.2026.104042 [paper, data]

Altered white matter network topology is associated with more profound language impairment in children with autism spectrum disorder.

Journal: NeuroImage. Clinical

Status: data only, 1 dataset cited

[25] doi:10.1016/j.mex.2026.104073 [paper, data]

ASC-emotion: A privacy-aware dataset for analysing emotional dysregulation and engagement in children with Autism<sup/>.

Journal: MethodsX

Status: data only, 1 dataset cited

[26] Code ↔ Paper doi:10.3390/genes17080874 [paper, repository]

Multi-Omic Analysis of Cerebrospinal Fluid Metabolites in Autism Spectrum Disorder: Biomarker Identification, Metabolic Genetics Insights, and Network Toxicology.

Journal: Genes

Authors' code: yanglab.westlake.edu.cn/software/smr (no license)

Status: code verified

Sunday, 26 July 2026 (1 paper)

[27] Code ↔ Paper doi:10.3390/nu18152441 [paper, repository]

Clinical Improvement and Taxonomic-Functional Gut Microbiome Remodeling After Six Months of Multi-Strain Synbiotic Supplementation in Mexican Children with Autism Spectrum Disorder.

Journal: Nutrients

Authors' code: biobakery/humann (MIT)

Status: code verified, 73 files readable, 2 matches

Friday, 24 July 2026 (1 paper)

[28] Code ↔ Paper doi:10.3389/fpsyt.2026.1803720 [paper, repository]

NeuroCon-AutismNet: a privacy-preserving multimodal framework toward autism screening via diffusion-regularized EEG biomarkers and empathy-aware multilingual dialogue.

Journal: Frontiers in psychiatry

Authors' code: mkarthiga2211/NeuroCon-AutismNet (no license)

Status: code verified, 2 files readable, 12 matches

Thursday, 23 July 2026 (2 papers)

[29] doi:10.1038/s41467-026-74958-1 [paper, data]

Acute rapamycin treatment reveals distinct mechanisms of dysfunction in a maternal inflammation mouse model.

Journal: Nature communications

Status: data only, 2 datasets cited

[30] Code ↔ Paper doi:10.1038/s41467-026-75162-x [paper, repository]

Dyscoordination of thalamic reticular spindles is associated with social memory deficits in mice and humans with autism spectrum disorder.

Journal: Nature communications

Authors' code: Zenodo 20755328 (CC-BY-4.0)

Status: code verified, 5 files readable, 3 matches

Wednesday, 22 July 2026 (1 paper)

[31] Code ↔ Paper doi:10.21203/rs.3.rs-10317780/v1 [paper, repository]

Attenuation of typical sex differences in the time-resolved functional connectivity of the fusiform gyrus in autism

Journal: Research Square (preprint)

Authors' code: MIPLabCH/mCAP (Apache-2.0)

Status: code verified, 12 files readable

Tuesday, 21 July 2026 (4 papers)

[32] Code ↔ Paper doi:10.1371/journal.pmed.1004860 [paper, repository]

Brain aging patterns among nine neurological disorders: A case-control study.

Journal: PLoS medicine

Authors' code: liangchuang11/Brain-age-prediction (no license), Zenodo 20743298 (CC-BY-4.0), liangchuang11/brain_age_de-identified-minimal_data (no license), Zenodo 20743260 (CC-BY-4.0)

Status: code verified, 156 files readable, 6 matches

[33] doi:10.1038/s44321-026-00491-9 [paper]

β-hydroxybutyrate restores social deficits by suppressing HDAC9 in the ACC of Shank3B-deficient mice.

Journal: EMBO molecular medicine

Status: data only

[34] Code ↔ Paper doi:10.1186/s13229-026-00730-3 [paper, repository]

Predicting emotional valence in autism: a preregistered study in the Bayesian Brain framework.

Journal: Molecular autism

Authors' code: IreneSophia/EMBA_PAL (GPL-3.0)

Status: code verified, 123 files readable, 13 matches

[35] Code ↔ Paper doi:10.1093/braincomms/fcag286 [paper, repository]

β-catenin deficiency in forebrain excitatory neurons induces fear memory deficits and physiological alterations.

Journal: Brain communications

Authors' code: doi:10.5061/dryad.kh18932pg (no license)

Status: code verified

Monday, 20 July 2026 (1 paper)

[36] Code ↔ Paper doi:10.3390/jimaging12070328 [paper, repository]

Contrastive and Transfer Learning for Aligned Multimodal Neuroimaging Classification of Autism Spectrum Disorder.

Journal: Journal of imaging

Authors' code: rajavavek/FAA-ASD-Neuroimaging (Apache-2.0)

Status: code verified, 49 files readable

Friday, 17 July 2026 (1 paper)

[37] doi:10.3389/fmicb.2026.1885281 [paper]

Washed microbiota transplantation improves clinical symptoms, gut microbiota, and metabolic profiles in autism spectrum disorder in a twin cohort.

Journal: Frontiers in microbiology

Status: data only

Thursday, 16 July 2026 (2 papers)

[38] doi:10.1002/aur.70314 [paper, data]

Task-Related Aperiodic EEG (1/f) Activity in Autism.

Journal: Autism research : official journal of the International Society for Autism Research

Status: data only, 1 dataset cited

[39] Code ↔ Paper doi:10.64898/2026.07.14.26358047 [paper, repository]

From Genes to Neurochemistry: Excitation and Inhibition Mechanisms of Sensory Differences in Autism

Journal: medRxiv (preprint)

Authors' code: HeJasonL/BATD (no license)

Status: code verified, 27 files readable, 3 matches

Sunday, 12 July 2026 (1 paper)

[40] Code ↔ Paper doi:10.1002/aur.70312 [paper, repository]

Aberrant Neural Entrainment to Word-Level Speech Patterns in Fragile X Syndrome: Evidence for a Statistical Learning Deficit.

Journal: Autism research : official journal of the International Society for Autism Research

Authors' code: Zenodo 18746668 (CC-BY-4.0)

Status: code verified, 5 files readable, 5 matches

Friday, 10 July 2026 (1 paper)

[41] Code ↔ Paper doi:10.1016/j.xhgg.2026.100652 [paper, repository]

CRISPR-engineered deletion of POGZ alters transcription factor binding at promoters of genes involved in synaptic signaling.

Journal: HGG advances

Authors' code: Zenodo 3564813 (CC-BY-4.0), talkowski-lab/POGZ (no license)

Status: code verified, 171 files readable, 17 matches

Thursday, 9 July 2026 (2 papers)

[42] doi:10.1371/journal.pone.0353181 [paper, data]

Dysregulated glucocorticoid-responsive immune genes in peripheral blood mononuclear cells as a shared molecular signature of autism spectrum disorder and irritable bowel syndrome.

Journal: PloS one

Status: data only, 1 dataset cited

[43] doi:10.3758/s13414-026-03306-8 [paper]

What contributes to our perception of the Shepard Tabletop Illusion?

Journal: Attention, perception & psychophysics

Status: code on request

Wednesday, 8 July 2026 (2 papers)

[44] doi:10.3389/fmicb.2026.1806688 [paper]

Isolation and characterization of a novel exopolysaccharide from the fermented probiotic &lt;i&gt;Lactiplantibacillus plantarum&lt;/i&gt; ZZU-1 and its application for attenuating autism-like behaviors.

Journal: Frontiers in microbiology

Status: data only

[45] Code ↔ Paper doi:10.1016/j.bpsgos.2026.100787 [paper, repository]

Dynamic Functional Synchronization Profiles in Autism Differ by Spatial Scale and Along Hierarchical Cortical Gradients.

Journal: Biological psychiatry global open science

Authors' code: gitlab.iit.it/bmp006-public/land_iit/turbulence_abide (no license)

Status: code verified, 16 files readable, 7 matches

Monday, 6 July 2026 (1 paper)

[46] Code ↔ Paper doi:10.3389/fpsyt.2026.1837909 [paper, repository]

Preliminary testing of a prespecified liability architecture for autism: theory-guided pathogenetic triad models outperform strength-matched alternatives.

Journal: Frontiers in psychiatry

Authors' code: OSF sg8ad (no license)

Status: code verified, 7 files readable, 12 matches

Friday, 3 July 2026 (1 paper)

[47] Code ↔ Paper doi:10.3389/fnins.2026.1858005 [paper, repository]

Targeted stool metabolomics suggests exploratory catecholamine- and tryptophan-linked metabolic features in autism spectrum disorder.

Journal: Frontiers in neuroscience

Authors' code: kevinliu-bmb/targeted-asd-stool-metabolomics (MIT)

Status: code verified, 3 files readable, 4 matches

Thursday, 2 July 2026 (1 paper)

[48] Code ↔ Paper doi:10.1111/cge.70204 [paper, repository]

Phenotypic Characterization of Five Children With PACS1-NDD: Longitudinal Insights Into Development, Behavior, and Brain.

Journal: Clinical genetics

Authors' code: danizoeller/myMixed-ModelsTrajectories (no license)

Status: dead link

Wednesday, 1 July 2026 (3 papers)

[49] Code ↔ Paper doi:10.1038/s41586-026-10699-x [paper, repository]

Competing programs shape cortical sensorimotor-association axis development.

Journal: Nature

Authors' code: danjgale/surfplot (BSD-3-Clause), sestanlab/MIND (no license)

Status: code verified, 41 files readable, 8 matches

[50] doi:10.1186/s13073-026-01699-7 [paper, data]

De novo variants in NPTN cause a neurodevelopmental disorder with autism and neuroplastin-PMCA hypofunction.

Journal: Genome medicine

Status: data only, 1 dataset cited

[51] Code ↔ Paper doi:10.1111/ejn.70638 [paper, repository]

Autism Spectrum Disorder-Associated Genes Enrich in Discrete Cortical, Limbic and Cerebellar Brain Regions.

Journal: The European journal of neuroscience

Authors' code: LorenzoOdierna/Analysis-Tool-for-Local-Association-of-Neuronal-Transcript-Expression-ATLANTE (no license), LorenzoOdierna/Analysis-Tool-for-Local-Association-of-Neuronal-Transcript-Expression-ATLANTE- (no license)

Status: code verified, 2 files readable

Monday, 29 June 2026 (2 papers)

[52] Code ↔ Paper doi:10.1038/s41598-026-58789-0 [paper, repository]

Metaheuristic hyperparameter optimization of deep neural networks for demographic-aware autism spectrum disorder classification.

Journal: Scientific reports

Authors' code: mohammedaly-tech/Demographic-Aware-ASD-Classification).An (no license), Zenodo 20419300 (CC-BY-4.0), mohammedaly-tech/demographic-aware-asd-classification (other)

Status: code verified, 24 files readable, 1 match

[53] Code ↔ Paper doi:10.1016/j.isci.2026.116541 [paper, repository]

The role of ucOCN in aerobic exercise induced amelioration of autism spectrum disorder phenotypes.

Journal: iScience

Authors' code: Zenodo 20341874 (CC-BY-4.0)

Status: code verified, 2 files readable, 1 match

Wednesday, 24 June 2026 (2 papers)

[54] doi:10.1186/s12866-026-05296-x [paper, data]

Gut bacterial characteristics in children with autism spectrum disorder according to symptom severity: a cross-sectional study.

Journal: BMC microbiology

Status: data only, 1 dataset cited

[55] Code ↔ Paper doi:10.1016/j.eclinm.2026.104049 [paper, repository]

Data leakage in feature selection invalidates reported classification accuracy for autism diagnosis from fMRI.

Journal: EClinicalMedicine

Authors' code: v1dya/XAI-for-ASD (no license)

Status: dead link

Monday, 22 June 2026 (1 paper)

[56] doi:10.1186/s13293-026-00941-6 [paper, data]

Prenatal BPA exposure perturbs RNA-binding protein-mediated splicing regulation and synaptogenesis in the developing cerebellum in a sex-dependent manner.

Journal: Biology of sex differences

Status: data only, 10 datasets cited

Sunday, 21 June 2026 (1 paper)

[57] Code ↔ Paper doi:10.1007/s44192-026-00521-5 [paper, repository]

Associations between anterior hypothalamic subunits and ADHD and autistic traits revealed by deep learning MRI segmentation.

Journal: Discover mental health

Authors' code: BBillot/hypothalamus_seg (Apache-2.0)

Status: code verified, 39 files readable

Saturday, 20 June 2026 (1 paper)

[58] Code ↔ Paper doi:10.1016/j.celrep.2026.117590 [paper, repository]

Impaired behavioral inhibition in Fmr1 KO mice is linked to disrupted visual cortex theta oscillations.

Journal: Cell reports

Authors' code: chubykin/V1-HPC-PFC-Behavior-Oscillations (no license), cortex-lab/allenCCF (no license)

Status: code verified, 91 files readable, 20 matches

Friday, 19 June 2026 (2 papers)

[59] Code ↔ Paper doi:10.1016/j.xgen.2026.101278 [paper, repository]

Single-cell profiling of DNA methylation in autism spectrum disorder prefrontal cortex reveals distinct regulatory and aging signatures.

Journal: Cell genomics

Authors' code: chooliu/snmCTseq_Pipeline (no license)

Status: code verified, 31 files readable, 6 matches

[60] doi:10.1038/s41398-026-04168-2 [paper]

Multimodal predictors of spoken vocabulary development in autism: the role of early childhood brain and behavior.

Journal: Translational psychiatry

Status: code on request

Thursday, 18 June 2026 (1 paper)

[61] Code ↔ Paper doi:10.21203/rs.3.rs-9839901/v1 [paper, repository]

Early life ventricular enlargement precedes emergence of autistic traits

Journal: Research Square (preprint)

Authors' code: SVRTK/SVRTK (Apache-2.0)

Status: code verified, 69 files readable

Wednesday, 17 June 2026 (1 paper)

[62] Code ↔ Paper doi:10.1038/s41586-026-10679-1 [paper, repository]

Cortical development dynamics across autism spectrum disorder mouse models.

Journal: Nature

Authors' code: modeldb:184162 (no license), git.ista.ac.at/research-sofware/mouseome (no license), Zenodo 17532669 (BSD-3-Clause), sommerc/tadpose (BSD-3-Clause)

Status: code verified, 28 files readable, 4 matches

Monday, 15 June 2026 (1 paper)

[63] doi:10.3389/fncom.2026.1851416 [paper, data]

AI-driven neuroanalytic modeling for mental health: multichannel CNN-based autism spectrum disorder detection via facial pattern analysis.

Journal: Frontiers in computational neuroscience

Status: data only, 1 dataset cited

Saturday, 13 June 2026 (2 papers)

[64] Code ↔ Paper doi:10.1186/s40708-026-00312-2 [paper, repository]

Synergistic and redundant information dynamics exhibit dissociable alterations across schizophrenia and neurodevelopmental conditions.

Journal: Brain informatics

Authors' code: gpreti/GSP_StructuralDecouplingIndex (Apache-2.0), nitrc.org/projects/conn (no license), hinatanago/PhiID_analysis (no license)

Status: code verified, 43 files readable, 2 matches

[65] Code ↔ Paper doi:10.1038/s41467-026-74320-5 [paper, repository]

Spatial architecture of autism pathogenesis reveals mosaic structural disarray during early development.

Journal: Nature communications

Authors' code: Zenodo 19229995 (CC-BY-4.0), jinyueliu0/spatial-signaling-score (no license)

Status: code verified, 20 files readable, 10 matches

Thursday, 11 June 2026 (1 paper)

[66] Code ↔ Paper doi:10.1371/journal.pdig.0001445 [paper, repository]

A digital twin approach for simultaneous reconstruction of brain anatomy and dynamics from neural data.

Journal: PLOS digital health

Authors' code: Zenodo 5879293 (other-open)

Status: code verified

Tuesday, 9 June 2026 (1 paper)

[67] doi:10.1186/s12888-026-08256-x [paper, data]

Graph Neural Networks and sequential architectures for autism detection from eye-tracking biomarkers: a multi-site study.

Journal: BMC psychiatry

Status: code on request, 2 datasets cited

Monday, 8 June 2026 (2 papers)

[68] Code ↔ Paper doi:10.1186/s12888-026-08178-8 [paper, repository]

Machine learning model to identify gut microbiome-derived metabolites as potential biomarkers of autism spectrum disorder: a pilot study.

Journal: BMC psychiatry

Authors' code: dec0der0b/IMPC (MIT)

Status: code verified, 14 files readable, 4 matches

[69] doi:10.1007/s11571-026-10481-9 [paper, data]

Social communication and brain network properties: cognitive predictors and modulation by autistic traits.

Journal: Cognitive neurodynamics

Status: data only, 1 dataset cited

Friday, 5 June 2026 (1 paper)

[70] doi:10.1371/journal.pone.0351146 [paper]

Differential analysis of Short chain fatty acids incubation in autistic organoids based on transcriptome sequencing.

Journal: PloS one

Status: data only

Wednesday, 3 June 2026 (2 papers)

[71] Code ↔ Paper doi:10.64898/2026.06.02.26354318 [paper, repository]

Attenuation of typical sex differences in the time-resolved functional connectivity of the fusiform gyrus in autism

Journal: medRxiv (preprint)

Authors' code: MIPLabCH/mCAP (Apache-2.0)

Status: code verified, 12 files readable

[72] doi:10.1126/sciadv.aea3316 [paper, data]

Charting the human-specific properties of gene expression networks in the infant prefrontal cortex.

Journal: Science advances

Status: data only, 1 dataset cited

Monday, 1 June 2026 (2 papers)

[73] Code ↔ Paper doi:10.1038/s44220-026-00656-y [paper, repository]

Multiscale heterogeneity of atypical functional connectivity in autism.

Journal: Nature. Mental health

Authors' code: ivaili/MultiscaleHeterogeneity (no license)

Status: code verified, 11 files readable, 3 matches

[74] Code ↔ Paper doi:10.1016/j.gutmic.2026.100006 [paper, repository]

From microbes to milestones: Gut bacterial abundances and functional pathways associate with neurodevelopment following preterm birth.

Journal: Gut microbiology

Authors' code: git.ecdf.ed.ac.uk/jbrl/microbiome-and-developmental-outcomes (no license), OSF ekdr7 (no license)

Status: code verified

Saturday, 30 May 2026 (1 paper)

[75] Code ↔ Paper doi:10.1038/s42003-026-10380-z [paper, repository]

Identification of moderate effect size genes in autism spectrum disorder through a novel gene pairing approach.

Journal: Communications biology

Authors' code: MahjaniLab/MES_Code (GPL-3.0), Zenodo 19859234 (CC-BY-4.0)

Status: code verified, 54 files readable, 7 matches

Friday, 29 May 2026 (1 paper)

[76] Code ↔ Paper doi:10.1038/s41598-026-55163-y [paper, repository]

Autism spectrum disorder identification using machine learning models on MRI data.

Journal: Scientific reports

Authors' code: Zenodo 20196663 (CC-BY-4.0), Suni-Jose/Autism-detection-using-MRI (MIT)

Status: code verified, 9 files readable, 11 matches

Thursday, 28 May 2026 (1 paper)

[77] doi:10.1016/j.ebiom.2026.106309 [paper, data]

An Adnp frameshift variant disrupts Wnt signalling inducing chromatocytoskeletal defects and autism-related behaviour in male mice.

Journal: EBioMedicine

Status: data only, 1 dataset cited

Wednesday, 27 May 2026 (1 paper)

[78] Code ↔ Paper doi:10.1038/s41467-026-73416-2 [paper, repository]

Defective ventral neurogenesis due to midfetal Chd8 mutation drives autistic-like behavior in mice.

Journal: Nature communications

Authors' code: heal-research/arPLS (GPL-2.0), akwamura/Chd8_scRNA-seq (no license), daisukeino/BehavioralAnalysis (no license), Zenodo 19105439 (CC-BY-4.0), Zenodo 19105511 (CC-BY-4.0), kentanitahara/chd8_scrna-seq (no license), kentanitahara/behavioralanalysis (no license)

Status: code verified, 72 files readable, 4 matches

Tuesday, 26 May 2026 (1 paper)

[79] doi:10.1016/j.xcrm.2026.102832 [paper]

CSNK2B gene replacement rescues autism-related phenotypes and establishes translational EEG biomarkers.

Journal: Cell reports. Medicine

Status: code on request

Monday, 25 May 2026 (1 paper)

[80] Code ↔ Paper doi:10.1038/s41398-026-04132-0 [paper, repository]

Early Trajectories of Resting-State EEG power in autistic children: a longitudinal study across language profiles.

Journal: Translational psychiatry

Authors' code: NoCe-Lab/rsEEG_ASD (no license)

Status: code verified, 1 file readable, 2 matches

Friday, 22 May 2026 (1 paper)

[81] Code ↔ Paper doi:10.1038/s41398-026-04130-2 [paper, repository]

White matter structure-function coupling in neonatal brain and its association with Autism-related traits in early childhood.

Journal: Translational psychiatry

Authors' code: zztute/WM-SFC (no license)

Status: code verified, 41 files readable, 4 matches

Thursday, 21 May 2026 (1 paper)

[82] doi:10.1186/s13059-026-04084-0 [paper, data]

Histone H1 variants regulate neurodevelopmental transcriptional programs in autism with 16p11.2 deletion.

Journal: Genome biology

Status: data only, 1 dataset cited

Wednesday, 20 May 2026 (1 paper)

[83] Code ↔ Paper doi:10.1126/sciadv.adq6577 [paper, repository]

Autism-like phenotypes and increased NMDAR2D expression in mice with KDM5B histone lysine demethylase deficiency.

Journal: Science advances

Authors' code: Zenodo 17466762 (CC-BY-4.0)

Status: code verified, 1 file readable, 3 matches

Tuesday, 19 May 2026 (2 papers)

[84] Code ↔ Paper doi:10.1186/s13229-026-00717-0 [paper, repository]

JUND-driven stress-responsive astrocytes promote neuronal apoptosis via enhanced gap junction signaling in autism spectrum disorder.

Journal: Molecular autism

Authors' code: jumphone/vector (no license)

Status: code verified, 10 files readable

[85] doi:10.3390/brainsci16050535 [paper, data]

Linking Auditory Brainstem Neural Stability to Parent-Reported Autistic Traits in School-Age Children.

Journal: Brain sciences

Status: data only, 1 dataset cited

Friday, 15 May 2026 (2 papers)

[86] Code ↔ Paper doi:10.1038/s41593-026-02287-z [paper, repository]

Autism subtypes identified using cross-species functional connectivity analyses.

Journal: Nature neuroscience

Authors' code: functional-neuroimaging/rsfMRI-preprocessing (no license), functional-neuroimaging/rsfMRI-global-local-connectivity (no license), functional-neuroimaging/gene_decoding_and_enrichment (no license), functional-neuroimaging/biological_subtyping (no license)

Status: code verified, 32 files readable, 14 matches

[87] doi:10.1016/j.bpsgos.2026.100760 [paper, data]

Prediction and Prediction Error in Autism: A Meta-Analysis of Functional Magnetic Resonance Imaging Results.

Journal: Biological psychiatry global open science

Status: data only, 1 dataset cited

Wednesday, 13 May 2026 (4 papers)

[88] Code ↔ Paper doi:10.7554/elife.106506 [paper, repository]

Modeling flexible behavior with remapping-based hippocampal sequence learning.

Journal: eLife

Authors' code: toppo365/flexiblemodel (MIT)

Status: code verified, 14 files readable

[89] Code ↔ Paper doi:10.1038/s41398-026-03952-4 [paper, repository]

Perineuronal nets in cerebellar nuclei neurons orchestrate social behaviour via regulation of neuronal activity in circuits innervated by the cerebellum.

Journal: Translational psychiatry

Authors' code: justuskebschull/cncode_final (no license)

Status: code verified, 110 files readable

[90] Code ↔ Paper doi:10.1038/s41586-026-10515-6 [paper, repository]

An X-linked long non-coding RNA, PTCHD1-AS, and the core features of autism.

Journal: Nature

Authors' code: pwilmart/PAW_pipeline (MIT)

Status: code verified, 14 files readable, 1 match

[91] doi:10.3390/diagnostics16101478 [paper]

Autistic vs. Control Differences in MRI Scan Quality Across ABIDE-II Sites.

Journal: Diagnostics (Basel, Switzerland)

Status: code on request

Monday, 11 May 2026 (2 papers)

[92] Code ↔ Paper doi:10.1038/s42003-026-09908-0 [paper, repository]

Offspring genetic diversity regulates rearing experiences that predict differential susceptibility to Chd8 haploinsufficiency.

Journal: Communications biology

Authors' code: adidust4/Offspring-genetic-diversity-Chd8-haploinsufficiency (no license)

Status: code verified, 2 files readable, 7 matches

[93] Code ↔ Paper doi:10.1016/j.patter.2026.101560 [paper, repository]

Automating region selection with genetic algorithms for energy landscape analyses of brain dynamics.

Journal: Patterns (New York, N.Y.)

Authors' code: MIS-Lab-Doshisha/ela-gaopt (Apache-2.0), Zenodo 19212556 (Apache-2.0)

Status: code verified, 23 files readable, 2 matches

Friday, 8 May 2026 (3 papers)

[94] Code ↔ Paper doi:10.1038/s41398-026-04036-z [paper, repository]

Distinct sensory atypicalities bridge the gap between brain chemistry and motor dysfunction in autism.

Journal: Translational psychiatry

Authors' code: OSF 5unmc (no license)

Status: code verified, 10 files readable, 4 matches

[95] Code ↔ Paper doi:10.1038/s42003-026-10011-7 [paper, repository]

Learning brain dynamics across distinct scaling regimes reveals psychiatric signatures.

Journal: Communications biology

Authors' code: Transconnectome/MBBN (MIT)

Status: code verified, 20 files readable, 22 matches

[96] Code ↔ Paper doi:10.1186/s11689-026-09706-z [paper, repository]

Neural oscillatory dynamics reveal altered top-down and integrative mechanisms during face processing in autistic children and unaffected siblings of autistic children.

Journal: Journal of neurodevelopmental disorders

Authors' code: tvanneau/SFARI-FAST (no license)

Status: code verified, 5 files readable, 3 matches

Wednesday, 6 May 2026 (1 paper)

[97] doi:10.3389/fcell.2026.1762737 [paper, data]

Novel mouse line with D277N mutation in the &lt;i&gt;Plau&lt;/i&gt; gene displays autism spectrum disorder-like traits.

Journal: Frontiers in cell and developmental biology

Status: data only, 4 datasets cited

Saturday, 2 May 2026 (1 paper)

[98] doi:10.1038/s41598-026-51487-x [paper]

Potential contribution of age-related and methodological factors to limited reproducibility in autism spectrum disorder blood miRNA biomarker studies: an exploratory meta-analysis.

Journal: Scientific reports

Status: code on request

Friday, 1 May 2026 (1 paper)

[99] doi:10.1111/desc.70186 [paper]

The Genetic Origin of Uneven Cognitive Profiles in Heritable Neurodevelopmental Conditions and Individual Differences: Computational Investigations.

Journal: Developmental science

Status: code on request

Friday, 24 April 2026 (1 paper)

[100] Code ↔ Paper doi:10.3390/brainsci16050455 [paper, repository]

Spec-RWKV: A Spectrum-Guided Multi-Scale Recurrent Modeling Framework for Multi-Center Resting-State fMRI-Assisted Diagnosis.

Journal: Brain sciences

Authors' code: arisaris28/spec-rwkv (no license)

Status: code verified, 28 files readable, 8 matches

Thursday, 23 April 2026 (1 paper)

[101] Code ↔ Paper doi:10.1038/s41467-026-71919-6 [paper, repository]

Suppression of astrocyte BMP signaling improves molecular signatures and functional deficits in a fragile X syndrome mouse model.

Journal: Nature communications

Authors' code: Zenodo 18826425 (CC-BY-4.0), Zenodo 18180000 (CC-BY-4.0)

Status: code verified, 10 files readable, 7 matches

Tuesday, 21 April 2026 (1 paper)

[102] Code ↔ Paper doi:10.1038/s44220-026-00623-7 [paper, repository]

Optimizing functional connectivity scanning conditions for predicting autistic traits.

Journal: Nature. Mental health

Authors' code: clhorien/tasks_versus_rest_in_autism_prediction (no license)

Status: code verified, 7 files readable, 2 matches

Monday, 20 April 2026 (1 paper)

[103] doi:10.1186/s13229-026-00716-1 [paper, data]

Nitric oxide inhibition ameliorates cortical proteomic changes in the Cntnap2&lt;sup&gt;-/-&lt;/sup&gt; and Shank3&lt;sup&gt;Δ4-22&lt;/sup&gt; mouse models of autism spectrum disorder.

Journal: Molecular autism

Status: data only, 4 datasets cited

Sunday, 19 April 2026 (1 paper)

[104] doi:10.3390/genes17040486 [paper]

An Integrative Network Analysis Framework for Identifying Altered Glycosylation Pathways Associated with Autism Spectrum Disorder.

Journal: Genes

Status: data only

Friday, 17 April 2026 (1 paper)

[105] Code ↔ Paper doi:10.1002/gps3.70014 [paper, repository]

Correspondence between morphological similarity of the left lateral orbitofrontal cortex and neurotransmitter systems in adolescent males with autism.

Journal: General psychiatry

Authors' code: juryxy/JuSpace (no license), Huashuang1221/ASD (no license)

Status: code verified, 36 files readable, 6 matches

Thursday, 16 April 2026 (1 paper)

[106] Code ↔ Paper doi:10.1016/j.celrep.2026.117262 [paper, repository]

Cerebellar acceleration of learning in an evidence-accumulation task.

Journal: Cell reports

Authors' code: wanglabprinceton/accumulating_puffs (Apache-2.0), misun6312/PBupsModel.jl (MIT)

Status: code verified, 55 files readable, 4 matches

Wednesday, 15 April 2026 (2 papers)

[107] Code ↔ Paper doi:10.1002/advs.202519479 [paper, repository]

Diminished Signal-to-Noise Ratio Disrupts Somatosensory Population Encoding and Drives Tactile Hyposensitivity in the Fmr1&lt;sup&gt;-/y&lt;/sup&gt; Autism Model.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Authors' code: FrickLab/Imaging_2PCalciumAnalysis (GPL-2.0)

Status: code verified, 57 files readable, 14 matches

[108] Code ↔ Paper doi:10.1073/pnas.2523130123 [paper, repository]

FABP7 controls radial glial scaffold stability during human cortical development.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: chuiqin/irGSEA (other), zhanghao-njmu/SCP (GPL-3.0)

Status: code verified, 49 files readable, 1 match

Tuesday, 14 April 2026 (1 paper)

[109] doi:10.3390/brainsci16040413 [paper, data]

Hippotherapy for Children with Autism Spectrum Disorder: Executive Function and Electrophysiological Outcomes.

Journal: Brain sciences

Status: data only, 1 dataset cited

Monday, 13 April 2026 (1 paper)

[110] doi:10.1007/s10571-026-01728-4 [paper, data]

MELK is Required for G2/M Phase Progression in Cortical Progenitors: Insights from Rare ASD-Associated Variants.

Journal: Cellular and molecular neurobiology

Status: data only, 1 dataset cited

Friday, 10 April 2026 (1 paper)

[111] Code ↔ Paper doi:10.1126/sciadv.aeb5842 [paper, repository]

Regulation of autism-related self-injurious behavior by electrical stimulation of corticostriatal circuits in mice and humans.

Journal: Science advances

Authors' code: lead-dbs.org (no license), CoBrALab/twolevel_ants_dbm (other), CoBrALab/optimized_antsMultivariateTemplateConstruction (other)

Status: code verified, 19 files readable, 2 matches

Wednesday, 8 April 2026 (1 paper)

[112] doi:10.1162/imag.a.1209 [paper]

Naturalistic movie viewing is an effective functional localizer of the fusiform face area in adolescents with and without autism.

Journal: Imaging neuroscience (Cambridge, Mass.)

Status: code on request

Tuesday, 7 April 2026 (1 paper)

[113] Code ↔ Paper doi:10.1016/j.dcn.2026.101721 [paper, repository]

Neonatal amygdala microstructure and structural connectivity are associated with autistic traits at 2 years of age.

Journal: Developmental cognitive neuroscience

Authors' code: git.ecdf.ed.ac.uk/jbrl/amy-neurodev (no license)

Status: code verified

Monday, 6 April 2026 (1 paper)

[114] Code ↔ Paper doi:10.1038/s41540-026-00699-y [paper, repository]

Inferring relationships among major psychiatric disorders in a resting-state functional connectivity-informed embedding space.

Journal: NPJ systems biology and applications

Authors' code: LeonBai/rsFC_embedding (no license)

Status: code verified, 3 files readable

Friday, 3 April 2026 (1 paper)

[115] Code ↔ Paper doi:10.1038/s41598-026-42120-y [paper, repository]

Qualitative EEG abnormalities in ASD reflect inhibition-dominated brain dynamics.

Journal: Scientific reports

Authors' code: figshare 31634182 (MIT), rhardstone/fei](https: (no license)

Status: code verified, 10 files readable, 1 match

Thursday, 2 April 2026 (1 paper)

[116] Code ↔ Paper doi:10.3389/fnagi.2026.1771822 [paper, repository]

Neuroanatomical patterns of dementia risk in autism spectrum disorder.

Journal: Frontiers in aging neuroscience

Authors' code: james-cole/brainageR (LGPL-3.0)

Status: code verified, 9 files readable, 1 match

Wednesday, 1 April 2026 (4 papers)

[117] Code ↔ Paper doi:10.1126/sciadv.adz3398 [paper, repository]

Copper deficiency impairs oligodendrocyte maturation and social behavior via mitophagy and mTOR suppression in ASD.

Journal: Science advances

Authors' code: Zenodo 17730406 (CC-BY-4.0), BertoLabMUSC/Usui_Metallome_2023 (no license)

Status: code verified, 32 files readable, 2 matches

[118] doi:10.1002/aur.70243 [paper]

Autism and Cortical Thickness Deviation From Neurotypical Controls: Evidence for a Spatial Association With Serotonin Receptors.

Journal: Autism research : official journal of the International Society for Autism Research

Status: code on request

[119] doi:10.1111/ejn.70490 [paper, data]

Analysis of Task Demand Effects on Visual and Auditory Mismatch Negativity (MMN) Across Autistic and Schizotypal Traits.

Journal: The European journal of neuroscience

Status: data only, 2 datasets cited

[120] Code ↔ Paper doi:10.1002/hbm.70496 [paper, repository]

Transdiagnostic Profiles of BOLD Signal Variability in Autism and Schizophrenia Spectrum Disorders: Associations With Cognition and Functioning.

Journal: Human brain mapping

Authors' code: tsecara/BOLD_signal_variability_Autism_Schizophrenia_TDC (no license)

Status: code verified, 11 files readable, 4 matches

Friday, 6 November 2020 (1 paper)

[121] Code ↔ Paper doi:10.1038/s41398-020-01068-x [paper, repository]

Alternative splicing landscape of the neural transcriptome in a cytoplasmic-predominant Pten expression murine model of autism-like Behavior.

Journal: Translational psychiatry

Authors' code: Thackes/PTEN-AlternativeSplicing (no license)

Status: code verified, 11 files readable, 2 matches