OSCR

<i>MedShapeNet</i> - a large-scale dataset of 3D medical shapes for computer vision.

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Jianningli/medshapenet-feedback

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Tools found in the code: imageio, Keras, Matplotlib, MONAI, NiBabel, NumPy, OpenCV, pandas, Pillow, PyTorch Geometric, PyTorch, scikit-image, scikit-learn, SciPy, SimpleITK, TensorFlow

Overview

Authors: Jianning Li, Zongwei Zhou, Jiancheng Yang, Antonio Pepe, Christina Gsaxner, Gijs Luijten, Chongyu Qu, Tiezheng Zhang, Xiaoxi Chen, Wenxuan Li, Marek Wodzinski, Paul Friedrich, Kangxian Xie, Yuan Jin, Narmada Ambigapathy, Enrico Nasca, Naida Solak, Gian Marco Melito, Viet Duc Vu, Afaque R Memon
and 137 other authorsChristopher Schlachta, Sandrine De Ribaupierre, Rajnikant Patel, Roy Eagleson, Xiaojun Chen, Heinrich Mächler, Jan Stefan Kirschke, Ezequiel de la Rosa, Patrick Ferdinand Christ, Hongwei Bran Li, David G Ellis, Michele R Aizenberg, Sergios Gatidis, Thomas Küstner, Nadya Shusharina, Nicholas Heller, Vincent Andrearczyk, Adrien Depeursinge, Mathieu Hatt, Anjany Sekuboyina, Maximilian T Löffler, Hans Liebl, Reuben Dorent, Tom Vercauteren, Jonathan Shapey, Aaron Kujawa, Stefan Cornelissen, Patrick Langenhuizen, Achraf Ben-Hamadou, Ahmed Rekik, Sergi Pujades, Edmond Boyer, Federico Bolelli, Costantino Grana, Luca Lumetti, Hamidreza Salehi, Jun Ma, Yao Zhang, Ramtin Gharleghi, Susann Beier, Arcot Sowmya, Eduardo A Garza-Villarreal, Thania Balducci, Diego Angeles-Valdez, Roberto Souza, Leticia Rittner, Richard Frayne, Yuanfeng Ji, Vincenzo Ferrari, Soumick Chatterjee, Florian Dubost, Stefanie Schreiber, Hendrik Mattern, Oliver Speck, Daniel Haehn, Christoph John, Andreas Nürnberger, João Pedrosa, Carlos Ferreira, Guilherme Aresta, António Cunha, Aurélio Campilho, Yannick Suter, Jose Garcia, Alain Lalande, Vicky Vandenbossche, Aline Van Oevelen, Kate Duquesne, Hamza Mekhzoum, Jef Vandemeulebroucke, Emmanuel Audenaert, Claudia Krebs, Timo van Leeuwen, Evie Vereecke, Hauke Heidemeyer, Rainer Röhrig, Frank Hölzle, Vahid Badeli, Kathrin Krieger, Matthias Gunzer, Jianxu Chen, Timo van Meegdenburg, Amin Dada, Miriam Balzer, Jana Fragemann, Frederic Jonske, Moritz Rempe, Stanislav Malorodov, Fin H Bahnsen, Constantin Seibold, Alexander Jaus, Zdravko Marinov, Paul F Jaeger, Rainer Stiefelhagen, Ana Sofia Santos, Mariana Lindo, André Ferreira, Victor Alves, Michael Kamp, Amr Abourayya, Felix Nensa, Fabian Hörst, Alexander Brehmer, Lukas Heine, Yannik Hanusrichter, Martin Weßling, Marcel Dudda, Lars E Podleska, Matthias A Fink, Julius Keyl, Konstantinos Tserpes, Moon-Sung Kim, Shireen Elhabian, Hans Lamecker, Dženan Zukić, Beatriz Paniagua, Christian Wachinger, Martin Urschler, Luc Duong, Jakob Wasserthal, Peter F Hoyer, Oliver Basu, Thomas Maal, Max J H Witjes, Gregor Schiele, Ti-chiun Chang, Seyed-Ahmad Ahmadi, Ping Luo, Bjoern Menze, Mauricio Reyes, Thomas M Deserno, Christos Davatzikos, Behrus Puladi, Pascal Fua, Alan L Yuille, Jens Kleesiek, Jan Egger
Journal: Biomedizinische Technik. Biomedical engineering
Published: 30 December 2024
Type: Research article
Status: code verified (how the code is found and verified)
DOI: 10.1515/bmt-2024-0396
License: CC BY
Institutions: Graz University of Technology (Austria), Computer Algorithms for Medicine (Austria), Essen University Hospital (Germany), Johns Hopkins University (United States), École Polytechnique Fédérale de Lausanne (Switzerland), Universitätsklinikum Aachen (Germany), RWTH Aachen University (Germany), Shanghai Jiao Tong University (China), Renji Hospital (China), State Key Laboratory of Mechanical System and Vibration (China), HES-SO University of Applied Sciences and Arts Western Switzerland (Switzerland), HES-SO Valais-Wallis (Switzerland), AGH University of Krakow (Poland), University of Basel (Switzerland), University at Buffalo, State University of New York (United States), Zhejiang Lab (China), Justus-Liebig-Universität Gießen (Germany), Universitätsklinikum Gießen und Marburg (Germany), Mehran University of Engineering and Technology (Pakistan), University Hospital (Canada), Medical University of Graz (Austria), TUM Klinikum (Germany), Technical University of Munich (Germany), Icometrix (Belgium) (Belgium), University of Zurich (Switzerland), University of Nebraska Medical Center (United States), University of Tübingen (Germany), Harvard University (United States), Massachusetts General Hospital (United States), University of Minnesota (United States), Centre Hospitalier Universitaire Vaudois (Switzerland), Inserm (France), Université de Bretagne Occidentale (France), Laboratoire de Traitement de l'Information Médicale (France), Brigham and Women's Hospital (United States), King's College London (United Kingdom), Elisabeth-TweeSteden Ziekenhuis (Netherlands), Eindhoven University of Technology (Netherlands), Digital Research Centre of Sfax (Tunisia), Centre National de la Recherche Scientifique (France), Centre Inria de l'Université Grenoble Alpes (France), Université Grenoble Alpes (France), University of Modena and Reggio Emilia (Italy), Iran University of Medical Sciences (Iran), University Health Network (Canada), University of Toronto (Canada), Vector Institute (Canada), Shanghai Artificial Intelligence Laboratory (China), UNSW Sydney (Australia), Universidad Nacional Autónoma de México (Mexico), University Medical Center Groningen (Netherlands), University of Groningen (Netherlands), University of Calgary (Canada), Hotchkiss Brain Institute (Canada), Universidade Estadual de Campinas (UNICAMP) (Brazil), Foothills Medical Centre (Canada), University of Hong Kong (Hong Kong SAR China), University of Pisa (Italy), Human Technopole (Italy), Otto-von-Guericke-Universität Magdeburg (Germany), Stanford University (United States), German Center for Neurodegenerative Diseases (Germany), Center for Behavioral Brain Sciences (Germany), University Hospital Magdeburg (Germany), University of Massachusetts Boston (United States), Universidade do Porto (Portugal), INESC TEC (Portugal), Medical University of Vienna (Austria), University of Trás-os-Montes and Alto Douro (Portugal), University of Bern (Switzerland), University of Pennsylvania (United States), Université de Bourgogne (France), CHU Dijon Bourgogne (France), Institut de Chimie Moléculaire de l'Université de Bourgogne (France), Ghent University (Belgium), Vrije Universiteit Brussel (Belgium), University of British Columbia (Canada), KU Leuven (Belgium), Leibniz Institute for Analytical Sciences - ISAS (Germany), University of Duisburg-Essen (Germany), TU Dortmund University (Germany), Karlsruhe Institute of Technology (Germany), German Cancer Research Center (Germany), University of Minho (Portugal), Monash University (Australia), Ruhr University Bochum (Germany), Evangelische Stiftung Volmarstein (Germany), BG Klinikum Duisburg (Germany), University Hospital Heidelberg (Germany), Harokopio University of Athens (Greece), University of Utah (United States), Stryker (Germany) (Germany), Kitware (United States) (United States), École de Technologie Supérieure (Canada), University Hospital of Basel (Switzerland), Stiftung Universitätsmedizin Essen (Germany), Radboud University Nijmegen (Netherlands), Radboud University Medical Center (Netherlands), Merck & Co., Inc., Rahway, NJ, USA (United States) (United States), University Hospital of Bern (Switzerland), Medizinische Hochschule Hannover (Germany), Technische Universität Braunschweig (Germany), Deutsches Konsortium für Translationale Krebsforschung (Germany)
Categories: human (organism), methods / tools (subfield)

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