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Mamba-Bi-LSTM with SHAP-Guided Iterative Refinement for Multimodal ARDS Diagnosis: A Dual-System Framework.

Overview

Authors: Mufeng Chen1, Fuchang Luo2, Jia Xie2, Quansheng Ren2
ORCID iDs: Mufeng Chen
  1. Department of Engineering Science, University of Oxford, Parks Road, Oxford OX1 3PJ, UK
  2. School of Electronics, Peking University, Science Building No. 5, Yiheyuan Lu, Haidian District, Beijing 100871, China; (F.L.); (J.X.)
Institutions: University of Oxford (United Kingdom); Peking University (China)
Journal: Bioengineering (Basel, Switzerland), volume 13, issue 7, article 794
Dates: received 15 May 2026; accepted 6 July 2026; published online 10 July 2026
Type: Research article · Language: English
License: CC BY
Identifiers: DOI 10.3390/bioengineering13070794 · PMID 42510460 · PMCID PMC13404641 · OpenAlex W7167922657
Open access: gold, a free copy (OpenAlex)
Status: code on request
Categories: EEG (modality), human (organism)
Methods: Spectral & time-frequency, Machine learning, Connectivity, Preprocessing, Complexity, Statistics, Single-unit activity, calcium imaging, Physiology & signal measures
Keywords: acute respiratory distress syndrome, Mamba-Bi-LSTM, dual-system framework, multimodal fusion, SHAP-guided refinement, feature selection gate, EEG neurophysiology, early warning, ICU decision support
Topic: Respiratory Support and Mechanisms (Pulmonary and Respiratory Medicine, Medicine), according to OpenAlex
Funding: High Performance Computing Platform of Peking University; Beijing Natural Science Foundation (L248094)
Citations: not cited yet (Europe PMC); 40 references in the paper

Abstract

Acute respiratory distress syndrome (ARDS) is associated with mortality rates up to 46% and remains challenging to diagnose early due to overlapping clinical presentations. We propose a dual-system framework for multimodal ARDS diagnosis that integrates a Mamba-Bi-LSTM primary discrimination system with a TreeSHAP-based verification system whose attribution outputs iteratively refine the primary system’s feature selection gate. The primary system processes heterogeneous clinical inputs—ventilator parameters, blood gas indices, chest imaging, and EEG signals—through a selective state-space Mamba module and bidirectional LSTM layers. The verification system applies TreeSHAP attribution to independently cross-validate primary outputs, provide clinically interpretable evidence, and supply ℓ1-normalised attribution vectors that directly modulate the Mamba feature selection gate weights during offline refinement. A confidence-and-consistency decision mechanism governs final output, and high-confidence predictions are incorporated as curriculum-filtered signals to iteratively recalibrate both systems through a confidence-gated offline refinement protocol. Evaluated on 3742 held-out patients from MIMIC-IV (internal test) and 2594 patients from the eICU Collaborative Research Database across 208 US hospitals (external validation), the complete system achieves 92.8% accuracy and an F1 score of 0.889 after offline iterative recalibration on the internal test set, with 91.6% accuracy and F1 of 0.871 on external validation, extending early warning time from 5.2 to 9.7 h. The P/F ratio consistently ranks as the top predictive feature in alignment with the Berlin definition. Ablation experiments confirm that EEG integration independently contributes a 2.7 percentage point accuracy gain and a 1.9-h extension of the warning window (McNemar χ2=27.0, p<0.001). All performance improvements over single-modality baselines and over existing methods are statistically significant (p<0.001, Bonferroni-corrected). End-to-end processing latency of 350 ms per case is compatible with real-time ICU deployment.

Reproduced under the paper's license (CC BY), from the paper cited above.

Code

The paper says that its authors' code is available on request: it was not published with the paper, so there is nothing to verify.

The paper's code and data availability statement is in the Data section.

Tracing map

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Data

No dataset and no data link were found in the paper.

Data Availability Statement

MIMIC-IV, MIMIC-III, and eICU Collaborative Research Database data are publicly available through PhysioNet (https://physionet.org) under credentialed access. Source code is available upon reasonable request to the corresponding author.

Reproduced under the paper's license (CC BY), from the paper cited above.

Versions

The history of this record: each version stored by the harvester or made by a correction of its authors or of the maintainers of its code, and what changed in its facts. The texts of the paper (its abstract, its availability statements) are not part of it; versions that changed only those are not listed.

Version 1, 27 September 2026: the first record

Recorded: type, language, journal, volume, issue, pages, dates, 4 authors, 9 keywords, 2 funders, 32 references.

Cite

This paper

Chen, M., Luo, F., Xie, J., & Ren, Q. (2026). Mamba-Bi-LSTM with SHAP-Guided Iterative Refinement for Multimodal ARDS Diagnosis: A Dual-System Framework. Bioengineering (Basel, Switzerland), 13(7), 794. https://doi.org/10.3390/bioengineering13070794

BibTeX

@article{chen2026mamba,
author = {Chen, Mufeng and Luo, Fuchang and Xie, Jia and Ren, Quansheng},
title = {{Mamba-Bi-LSTM with SHAP-Guided Iterative Refinement for Multimodal ARDS Diagnosis: A Dual-System Framework}},
journal = {Bioengineering (Basel, Switzerland)},
year = {2026},
month = jul,
volume = {13},
number = {7},
pages = {794},
publisher = {Multidisciplinary Digital Publishing Institute (MDPI)},
issn = {2306-5354},
doi = {10.3390/bioengineering13070794},
url = {https://doi.org/10.3390/bioengineering13070794},
pmid = {42510460},
pmcid = {PMC13404641}
}

RIS

TY - JOUR
AU - Chen, Mufeng
AU - Luo, Fuchang
AU - Xie, Jia
AU - Ren, Quansheng
TI - Mamba-Bi-LSTM with SHAP-Guided Iterative Refinement for Multimodal ARDS Diagnosis: A Dual-System Framework
T2 - Bioengineering (Basel, Switzerland)
J2 - Bioengineering (Basel)
PY - 2026
DA - 2026/07/10
VL - 13
IS - 7
SP - 794
SN - 2306-5354
PB - Multidisciplinary Digital Publishing Institute (MDPI)
DO - 10.3390/bioengineering13070794
UR - https://doi.org/10.3390/bioengineering13070794
LA - en
ER -

CSL-JSON

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"author": [
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