Understanding Glioblastoma Dynamics Using 3D Organoids and Engineered Extracellular Matrix.
Overview
- Interdisciplinary Graduate Program in Genetics and Genomics Texas A&M University College Station Texas USA
- Department of Cell Biology and Genetics Texas A&M Health Science Center Bryan Texas USA
- Department of Biomedical Engineering Texas A&M University College Station Texas USA
- Department Medical Physiology Texas A&M Health Science Center Bryan Texas USA
- Department of Materials Science and Engineering Texas A&M University College Station Texas USA
Abstract
Glioblastoma multiforme (GBM) is an aggressive, angiogenic WHO grade IV glioma marked by rapid progression, therapeutic resistance, and poor prognosis. A defining feature of GBM is the presence of glioma stem‐like cells (GSC), which reside in specialized perivascular niches and drive tumor progression, recurrence, and therapeutic resistance. Current in vitro GBM models inadequately recapitulate the structural and biochemical cues of the native perivascular niche due to the absence of functional vasculature and brain‐mimetic extracellular matrix (ECM), limiting their physiological relevance and predictive power. To address the limitations of existing in vitro GBM models, we developed a patient‐derived GSC derived Matrigel spheroid system that transitions into organoids and enables integration into engineered microenvironments. Our model incorporates GSC spheroids representing proneural and mesenchymal GBM subtypes, a synthetic engineered extracellular matrix (eECM), and endothelial cells (EC) seeded on the matrix surface. Our results show that Matrigel‐derived GSC spheroids progressively differentiate over two weeks, with significantly enhanced expression of cell‐specific markers in the presence of EC. Encapsulation of these organoids within eECM, combined with EC co‐culture, further promoted induction of GBM‐associated genes. Together, this platform provides a modular in vitro system for investigating GBM pathophysiology.
Reproduced under the paper's license (CC BY), from the paper cited above.
Code
The paper links to its data and to no code of its authors: see the Data section.
Tracing map
A tracing map links a paper to the code its authors published: this paper has none, so it has no map.
Data
Datasets cited
- zenodo:16907364, at Zenodo; found in DataCite
- zenodo:16907365, at Zenodo; found in DataCite
Data Availability Statement
The data that support the findings of this study are available in Zenodo at https://
Reproduced under the paper's license (CC BY), from the paper cited above.
Versions
The history of this record: each version stored by the harvester or made by a correction of its authors or of the maintainers of its code, and what changed in its facts. The texts of the paper (its abstract, its availability statements) are not part of it; versions that changed only those are not listed.
Version 1, 30 September 2026: the first record
Recorded: type, language, journal, volume, issue, pages, dates, 8 authors, 5 keywords, 8 MeSH terms, 3 funders, 102 references, 15 RRIDs.
Cite
This paper
McManis, A., Jimenez, C. A., Shirolkar, A., Raza ur Rehman, S., Mallick, S., Murphy, M., Gaharwar, A. K., & Singh, I. (2026). Understanding Glioblastoma Dynamics Using 3D Organoids and Engineered Extracellular Matrix. Advanced science (Weinheim, Baden-Wurttemberg, Germany), 13(24), e22926. https://
BibTeX
@article{mcmanis2026unde
author = {McManis, Autumn and Jimenez, Charles Ashley and Shirolkar, Abha and Raza ur Rehman, Syed and Mallick, Sumana and Murphy, Malea and Gaharwar, Akhilesh K. and Singh, Irtisha},
title = {{Understanding Glioblastoma Dynamics Using 3D Organoids and Engineered Extracellular Matrix}},
journal = {Advanced science (Weinheim, Baden-Wurttemberg, Germany)},
year = {2026},
month = mar,
volume = {13},
number = {24},
pages = {e22926},
publisher = {Wiley},
issn = {2198-3844},
doi = {10.1002/
url = {https://
pmid = {41903119},
pmcid = {PMC13115983}
}
RIS
TY - JOUR
AU - McManis, Autumn
AU - Jimenez, Charles Ashley
AU - Shirolkar, Abha
AU - Raza ur Rehman, Syed
AU - Mallick, Sumana
AU - Murphy, Malea
AU - Gaharwar, Akhilesh K.
AU - Singh, Irtisha
TI - Understanding Glioblastoma Dynamics Using 3D Organoids and Engineered Extracellular Matrix
T2 - Advanced science (Weinheim, Baden-Wurttemberg, Germany)
J2 - Adv Sci (Weinh)
PY - 2026
DA - 2026/
VL - 13
IS - 24
SP - e22926
SN - 2198-3844
PB - Wiley
DO - 10.1002/
UR - https://
LA - en
ER -
CSL-JSON
{
"id": "10.1002/
"type": "article-journal",
"title": "Understanding Glioblastoma Dynamics Using 3D Organoids and Engineered Extracellular Matrix",
"container-title": "Advanced science (Weinheim, Baden-Wurttemberg, Germany)",
"author": [
{
"family": "McManis",
"given": "Autumn"
},
{
"family": "Jimenez",
"given": "Charles Ashley"
},
{
"family": "Shirolkar",
"given": "Abha"
},
{
"family": "Raza ur Rehman",
"given": "Syed"
},
{
"family": "Mallick",
"given": "Sumana"
},
{
"family": "Murphy",
"given": "Malea"
},
{
"family": "Gaharwar",
"given": "Akhilesh K."
},
{
"family": "Singh",
"given": "Irtisha"
}
],
"container-title-short":
"volume": "13",
"issue": "24",
"page": "e22926",
"DOI": "10.1002/
"PMID": "41903119",
"PMCID": "PMC13115983",
"ISSN": "2198-3844",
"publisher": "Wiley",
"URL": "https://
"language": "en",
"issued": {
"date-parts": [
[
2026,
3,
28
]
]
}
}
Similar papers
The papers with a page that share the most with this one: the tools found in their code, their categories, datasets, cited references and authors, the rarest counting most.
- [1] doi:10.1186/s40478-023-01613-x
- Decoding key cell sub-populations and molecular alterations in glioblastoma at recurrence by single-cell analysis.Journal: Acta neuropathologica communicationsIn common: other condition, cellular / molecular, 7 references
- [2] doi:10.1039/d5lc01105a [code]
- Dissociable perfusion chip (DPC): perfusable microfluidic chip for single-cell screening of anti-cancer drugs in live glioblastoma explants.Journal: Lab on a chipIn common: other condition, 5 references
- [3] doi:10.1093/neuonc/noab269
- Cancer cell heterogeneity and plasticity: A paradigm shift in glioblastoma.Journal: Neuro-oncologyIn common: other condition, 5 references
- [4] doi:10.1038/s41467-025-64753-9
- Olig1/
2 Orchestrates Progenitor Cell Fates during Mammalian Cortical Gliogenesis and Gliomagenesis. Journal: Nature communicationsIn common: other condition, cellular / molecular, 4 references - [5] doi:10.1002/adhm.202504889 [code]
- Mapping the Cerebral Organoid Landscape: A Systematic Review of Preclinical 3D Models in Neuroscience.Journal: Advanced healthcare materialsIn common: other condition, 5 references
- [6] doi:10.1111/bpa.70125
- From patient to tumor organoid: Culture protocol choice controls glioblastoma tumor architecture and identity.Journal: Brain pathology (Zurich, Switzerland)In common: other condition, 5 references
- [7] doi:10.1016/j.celrep.2025.116848 [code]
- Human organoid tumor transplantation identifies functional glioblastoma-microenviro
nment communication mediated by PTPRZ1. Journal: Cell reportsIn common: other condition, cellular / molecular, 5 references - [8] doi:10.1038/s41467-025-58366-5 [code]
- Combined targeting of glioblastoma stem cells of different cellular states disrupts malignant progression.Journal: Nature communicationsIn common: other condition, cellular / molecular, 5 references
- [9] doi:10.1016/j.celrep.2022.111511
- A molecular interactome of the glioblastoma perivascular niche reveals integrin binding sialoprotein as a mediator of tumor cell migration.Journal: Cell reportsIn common: other condition, cellular / molecular, 4 references
- [10] doi:10.1186/s12885-024-13187-5
- Human stem cell models to unravel brain cancer.Journal: BMC cancerIn common: other condition, cellular / molecular, 5 references
Contribute
The authors of this paper can claim it, correct its record and validate its tracing map, and the maintainers of its code (its owner, or a public member of its organization) correct what it says of their repository; anyone signed in can ask for its removal. Every request goes to OSCR's own machine, which answers it; your account page follows them.
Sign in with ORCID to claim this paper as one of its authors, correct its record or validate its tracing map: when the paper's metadata lists your ORCID iD, you are recognized at once. Maintainers of its code: sign in with GitHub, then claim the repository on your account page.
Claim this paper
Correct its record
Say what each link of this record is, remove the ones that are not the paper's, add the ones that are missing. The correction becomes a new version of the record, in its Versions section.
Request its removal
To ask OSCR to remove this record, the copies of its authors' scripts or its tracing map, use the removal request page: signed in, you say who you are, what to remove and why, then review and confirm the request. Published rules decide every request (how).
Discussion, reproductions, activity
Discussion: code errors and mismatches between the code and the paper about this paper and its code, from readers and its authors, beside the paper and its tracing map.
Reproductions: reports from readers who ran the authors' code and did not get the paper's result, what they ran, with which environment, commit and data.
Activity: what happens around this paper: new versions of its record, its map's validation, discussions and reproductions. It opens with sign-in.
