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Early Spatial and Contextual Coding Deficits in Hippocampal CA1 Precede Performance Decline in an Alzheimer's Disease Model.

Overview

Authors: Yimei Li1,2, Mary Ann Go1, Hualong Zhang1,3, Robertas Aleksynas4, Juliana Kim1, Mingyang Gao1, Seigfred Prado1,5, Magdalena Sastre4, Simon R Schultz1
  1. Centre for Neurotechnology and Department of Bioengineering, Imperial College London, London, UK
  2. Brain Cognition and Brain Disease Institute, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China
  3. Department of Biomedical Engineering, University of Melbourne, Melbourne, Australia
  4. Department of Brain Sciences, Imperial College London, London, UK
  5. Department of Electronics Engineering, University of Santo Tomas, Manila, Philippines
Dates: received 5 March 2026; accepted 17 August 2026; published online 9 September 2026; in print September 2026
Type: Research article · Language: English
License: CC BY
Identifiers: DOI 10.1002/advs.77419 · PMID 42717515 · PMCID PMC13558906 · OpenAlex W4407262522
Open access: gold, a free copy (OpenAlex)
Status: dead link
Categories: mouse (organism), Alzheimer's / dementia (population)
Methods: Statistics, Connectivity, fMRI & imaging, Single-unit activity, calcium imaging, Machine learning
Keywords: alzheimer's disease, cholinergic modulation, contextual coding, hippocampal CA1, place cells, spatial navigation, splitter cells
Topic: Alzheimer's disease research and treatments (Physiology, Medicine), according to OpenAlex
Funding: Mrs Anne Uren and the Michael Uren Foundation to SRS (BBSRCBB/Y514202/1toSRS, EPSRCEP/W024020/1andEP/W035057/1toSRS); Biotechnology and Biological Sciences Research Council (BB/Y514202/1)
Citations: not cited yet (Europe PMC); 76 references in the paper

Abstract

Alzheimer's disease (AD) is characterized by progressive memory decline, yet how hippocampal representations change at early AD stages remains largely unknown. In this study, we utilized a real‐world head‐fixed spatial alternation task combined with in vivo two‐photon imaging to investigate hippocampal CA1 representations in 5xFAD mice. While 7–9 month old 5xFAD mice showed significant deficits in task learning, 2–4 month old mice performed normally, enabling assessment of hippocampal coding prior to behavioral decline. At this early stage, CA1 neurons exhibited intact global spatial encoding but demonstrated impaired task‐related place cell representations. Contextual representations revealed by trajectory‐dependent coding were weakened at both the population and single cell levels, accompanied by reduced retrospective dominance and greater prospective weighting during behavioral choices. During task learning, longitudinally unstable place cells showed greater impairments in spatial coding, whereas stable place cells remained largely preserved in early stage AD mice. Additionally, chemogenetic activation of basal forebrain cholinergic neurons increased spatial information and within‐session stability, while promoting trajectory‐dependent coding in these early stage 5xFAD mice. Together, these findings reveal selective early impairments in hippocampal task‐related spatial and contextual representations in AD that precede overt deficits in spatial alternation performance and remain amenable to cholinergic modulation.

Reproduced under the paper's license (CC BY), from the paper cited above.

Code

No file of the authors' code could be read here: it is described below, and read at its source.

doi:10.5061/dryad.z34tmpgwr

License: none: the authors keep all their rights
State: the link is dead, verified on 26 September 2026
Evidence: found in the paper
Software Heritage: not checked
Found in: “Data and Materials Availability”
Not found: README, license file, CITATION.cff, environment file, tests, continuous integration, documentation
Availability: 1 check, the latest on 26 September 2026: the link is dead (HTTP 404)
  • 26 September 2026: the link is dead (HTTP 404)

The paper's code and data availability statement is in the Data section.

Tracing map

Proposed by the machine: these links were found in the paper and verified at the source, without human review. The map will receive a Zenodo DOI once one of the paper's authors has validated it with their ORCID.

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  • 0 scripts, each with its path and the digest of its content;
  • no match between paragraphs and code yet;
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Its JSON (tracing-map.json) is deposited on Zenodo with its DOI once the map is validated.

Data

No dataset and no data link were found in the paper.

Data and Materials Availability

Code and data used to generate the figures described in this paper are available via Data Dryad at https://doi.org/10.5061/dryad.z34tmpgwr.

Reproduced under the paper's license (CC BY), from the paper cited above.

Versions

The history of this record: each version stored by the harvester or made by a correction of its authors or of the maintainers of its code, and what changed in its facts. The texts of the paper (its abstract, its availability statements) are not part of it; versions that changed only those are not listed.

Version 1, 27 September 2026: the first record

Recorded: type, language, journal, pages, dates, 9 authors, 7 keywords, 2 funders, 75 references.

Cite

This paper

Li, Y., Go, M. A., Zhang, H., Aleksynas, R., Kim, J., Gao, M., Prado, S., Sastre, M., & Schultz, S. R. (2026). Early Spatial and Contextual Coding Deficits in Hippocampal CA1 Precede Performance Decline in an Alzheimer's Disease Model. Advanced science (Weinheim, Baden-Wurttemberg, Germany), e77419. https://doi.org/10.1002/advs.77419

BibTeX

@article{li2026early,
author = {Li, Yimei and Go, Mary Ann and Zhang, Hualong and Aleksynas, Robertas and Kim, Juliana and Gao, Mingyang and Prado, Seigfred and Sastre, Magdalena and Schultz, Simon R},
title = {{Early Spatial and Contextual Coding Deficits in Hippocampal CA1 Precede Performance Decline in an Alzheimer's Disease Model}},
journal = {Advanced science (Weinheim, Baden-Wurttemberg, Germany)},
year = {2026},
month = sep,
pages = {e77419},
publisher = {Wiley},
issn = {2198-3844},
doi = {10.1002/advs.77419},
url = {https://doi.org/10.1002/advs.77419},
pmid = {42717515},
pmcid = {PMC13558906}
}

RIS

TY - JOUR
AU - Li, Yimei
AU - Go, Mary Ann
AU - Zhang, Hualong
AU - Aleksynas, Robertas
AU - Kim, Juliana
AU - Gao, Mingyang
AU - Prado, Seigfred
AU - Sastre, Magdalena
AU - Schultz, Simon R
TI - Early Spatial and Contextual Coding Deficits in Hippocampal CA1 Precede Performance Decline in an Alzheimer's Disease Model
T2 - Advanced science (Weinheim, Baden-Wurttemberg, Germany)
J2 - Adv Sci (Weinh)
PY - 2026
DA - 2026/09/09
SP - e77419
SN - 2198-3844
PB - Wiley
DO - 10.1002/advs.77419
UR - https://doi.org/10.1002/advs.77419
LA - en
ER -

CSL-JSON

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