Brain atrophy staging in spinocerebellar ataxia type 3 for clinical prognosis and trial enrichment.

This page is built on request from the registry's record of the paper. The 6,000 most recent papers have a fuller page, built ahead of time, with the Code ↔ Paper reader, the tracing map and its validation, the record's versions, how to cite it and similar papers. This paper is older: its record, its code, its data and the requests about it are below.

Code

19 files of its code read. The Code ↔ Paper reader is built for the 6,000 most recent papers only: this paper's code is read at its source.

ucl-pond/pySuStaIn

License: MIT

State: the link answers

Copies: kept by the registry: this license allows it

Tools found in the code: Matplotlib, NumPy, pandas, Pillow, scikit-learn, SciPy, seaborn, statsmodels

OverviewAuthors: Hannah Baumeister, Philipp Wegner, Mónica Ferreira, Tamara Schaprian, Marcondes C. França Jr., Thiago Junqueira Ribeiro Rezende, Alberto Rolim Muro Martinez, Hong Jiang, Zhao Chen, Liao Weihua, Marcus Grobe-Einsler, Berkan Koyak, Demet Önder, Bart van de Warrenburg, Judith van Gaalen, Alexandra Durr, Giulia Coarelli, Matthis Synofzik, Ludger Schöls, Paola Giuntiand 20 other authorsHector Garcia-Moreno, Gülin Öz, James Joers, Dagmar Timmann, Andreas G. Thieme, Heike Jacobi, Jeroen de Vries, Peter Barker, Chiadikaobi Onyike, Eva-Maria Ratai, Jeremy D. Schmahmann, Kathrin Reetz, Jon Infante, Jeannette Huebener-Schmid, David Kuegler, Thomas Klockgether, David Berron, Jennifer Faber, DELCODE/DANCER, ESMI MRI Study Groups
Journal: EBioMedicine
Published: 23 December 2025
Type: Research article
Status: code verified (how the code is found and verified)
DOI: 10.1016/j.ebiom.2025.106090
License: CC BY
Institutions: German Center for Neurodegenerative Diseases (Germany), University of Bonn (Germany), Universidade Estadual de Campinas (UNICAMP) (Brazil), Central South University (China), Xiangya Hospital Central South University (China), University Hospital Bonn (Germany), Radboud University Medical Center (Netherlands), Donders Institute for Brain, Cognition and Behaviour (Netherlands), Rijnstate Hospital (Netherlands), Centre National de la Recherche Scientifique (France), Inserm (France), Sorbonne Université (France), Pitié-Salpêtrière Hospital (France), Institut du Cerveau (France), Hertie Institute for Clinical Brain Research (Germany), University of Tübingen (Germany), UCL Queen Square Institute of Neurology (United Kingdom), University College London (United Kingdom), University of Minnesota (United States), University of Duisburg-Essen (Germany), University Hospital Heidelberg (Germany), University Medical Center Groningen (Netherlands), University of Groningen (Netherlands), Johns Hopkins University (United States), Johns Hopkins Medicine (United States), Harvard University (United States), Massachusetts General Hospital (United States), Athinoula A. Martinos Center for Biomedical Imaging (United States), Forschungszentrum Jülich (Germany), Jülich Aachen Research Alliance (Germany), RWTH Aachen University (Germany), Universidad de Cantabria (Spain), Biomedical Research Networking Center on Neurodegenerative Diseases (Spain), Marqués de Valdecilla University Hospital (Spain), Instituto de Investigación Marqués de Valdecilla (Spain), Lund University (Sweden), Center for Behavioral Brain Sciences (Germany), Otto-von-Guericke-Universität Magdeburg (Germany)
Categories: structural MRI / diffusion (modality), human (organism), other condition (population), clinical / translational (subfield)

Data

No dataset cited, and no data link found.

Contribute

The authors of this paper can claim it and correct its record, and the maintainers of its code (its owner, or a public member of its organization) correct what it says of their repository; anyone signed in can ask for its removal. Every request goes to the registry's own machine, which answers it; your account page follows them.

Sign in with ORCID to claim this paper as one of its authors or correct its record: when the paper's metadata lists your ORCID iD, you are recognized at once. Maintainers of its code: sign in with GitHub, then claim the repository on your account page.

Add the badge to the code's README

Authors and maintainers of this paper's code: the badge says what OSCR knows of the paper and links the code to this page. Paste one of these under the README's title. Keep the two marks around it: they let the badge be replaced in place, never added twice. Nothing is changed for you.

Markdown

<!-- oscr-badge:start -->
[![OSCR](https://openscicode.org/badge/doi/10.1016/j.ebiom.2025.106090.svg)](https://openscicode.org/badge/doi/10.1016/j.ebiom.2025.106090)
<!-- oscr-badge:end -->

reStructuredText

.. oscr-badge:start

.. image:: https://openscicode.org/badge/doi/10.1016/j.ebiom.2025.106090.svg
   :target: https://openscicode.org/badge/doi/10.1016/j.ebiom.2025.106090
   :alt: OSCR

.. oscr-badge:end

HTML

<!-- oscr-badge:start -->
<a href="https://openscicode.org/badge/doi/10.1016/j.ebiom.2025.106090"><img src="https://openscicode.org/badge/doi/10.1016/j.ebiom.2025.106090.svg" alt="OSCR"></a>
<!-- oscr-badge:end -->

On GitHub, open the README, choose Edit (the pencil), paste the snippet under the title, then "Commit changes".

ucl-pond/pySuStaIn on GitHub

Or let it be kept for you, once you choose it: oscr badge --write from the command line, or the GitHub Action in your repository's workflows. Every other form is on the badge page.

Request its removal

To ask for this record, the copies of its authors' scripts or its tracing map to be removed, use the removal request page: signed in, you say who you are, what to remove and why, then review and confirm the request. Published rules decide every request (how).