Sound-evoked auditory neurophysiological signals are a window into prodromal functional differences in a preclinical model of Alzheimer's disease.
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The authors' code
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- # Instructions
- When creating these scripts, we used Matlab 2021A, with toolboxes listed in instructions.txt at the top level directory in the accompanying zip file.
- Scripts are separated by figure numbers, but in some cases, data and functions are shared across folders, so it is not recommended to take subdirectories out of the main directory.
- To ameliorate freezing issues on certain platforms (macOS using M1 processors, in our case), we’ve disabled showing the plots by default, and instead, the .TIF files are saved in the directory the scripts are run in.
- In the special case of K-means clustering visualizations in figures 10/12 where the results aren’t always deterministic, for the purposes of recreating similar visualizations with matching labels, we opted to continuously run the K-means clustering until the labels were the same as in the paper, rather than dynamically determining the correct labels at runtime. This is strictly for demonstration purposes.
- ## Troubleshooting
- 1. There is a small chance that there could be small issues in the code, due to the chance that all of the code may not be platform-independent. If there is an issue with the code, please make sure that the path separators are correct on your platform. To compare, on your Matlab installation, you can run ```matlab
- yourPath = [‘your’ filesep ‘path’ filesep ‘here’]
- ```
- and compare that output the path in the code that has the issue. The resulting output on my machine is ‘your/path/here’
- 2. The second common error when sharing Matlab code is dreaded PATH errors. We’ve taken every precaution to prevent these from being an issue. When running these scripts, please make sure you’re running them from the directory they belong in.
README.md, under CC-BY-4.0 · at the source
Overview
- Biomedical Research Institute of New Jersey,Cedar Knolls, NJ 07927 USA
- Atlantic Health System,Morristown, NJ 07960 USA
- Rutgers Robert Wood Johnson Medical School,New Brunswick, NJ 08901 USA
- Department of Psychology—Behavioral and Systems Neuroscience, Rutgers University-New Brunswick,327 Psychology Building, 152 Frelinghuysen Road, Piscataway, NJ 08854 USA
- Department of Psychology—Cognitive Psychology, Rutgers University,Piscataway, NJ 08854 USA
- Computational Biomedicine Imaging and Modelling, Rutgers University,Piscataway, NJ 08854 USA
- Rutgers Center for Cognitive Science (RuCCS), Rutgers University,Piscataway, USA
- Department of Head and Neck Surgery & Communication Sciences, Rutgers Robert Wood Johnson Medical School,New Brunswick, NJ 08901 USA
Abstract
The abstract is not reproduced here: the paper's license (CC BY-NC-ND) does not allow it. Read it in the paper, at the publisher or on Europe PMC.
Repository
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Zenodo 6299560
Availability: 1 check, the latest on 28 September 2026: the link answers (HTTP 200)
- 28 September 2026: the link answers (HTTP 200)
1 file
- README.md, Text, 16 lines
The paper's code and data availability statement is in the Data section.
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Data
Datasets cited
- zenodo:17064267, at Zenodo; found in “Data availability”
Code and data availability statement
The paper has a code and data availability statement. Its license (CC BY-NC-ND) does not allow reproducing it here; in short, from what the harvester recognized in it:
- it points to a dataset: Zenodo 17064267
- it points to the authors' code: Zenodo 6299560
Read it in the paper: doi.org/10.1038/s41598-026-51854-8.
Versions
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Version 1, 28 September 2026: the first record
Recorded: type, language, journal, volume, issue, pages, dates, 7 authors, 9 keywords, 13 MeSH terms, 4 funders, 78 references.
Cite
This paper
Gungor Aydin, A., Manoj, P., Ramadan, F., Rajan, S., Youssef, E., Torres, E. B., & Bieszczad, K. M. (2026). Sound-evoked auditory neurophysiological signals are a window into prodromal functional differences in a preclinical model of Alzheimer's disease. Scientific reports, 16(1), 23850. https://
BibTeX
@article{gungoraydin2026
author = {Gungor Aydin, Aysegul and Manoj, Pranav and Ramadan, Faiza and Rajan, Sarah and Youssef, Elias and Torres, Elizabeth B. and Bieszczad, Kasia M.},
title = {{Sound-evoked auditory neurophysiological signals are a window into prodromal functional differences in a preclinical model of Alzheimer's disease}},
journal = {Scientific reports},
year = {2026},
month = may,
volume = {16},
number = {1},
pages = {23850},
publisher = {Nature Publishing Group},
issn = {2045-2322},
doi = {10.1038/
url = {https://
pmid = {42106438},
pmcid = {PMC13433988}
}
RIS
TY - JOUR
AU - Gungor Aydin, Aysegul
AU - Manoj, Pranav
AU - Ramadan, Faiza
AU - Rajan, Sarah
AU - Youssef, Elias
AU - Torres, Elizabeth B.
AU - Bieszczad, Kasia M.
TI - Sound-evoked auditory neurophysiological signals are a window into prodromal functional differences in a preclinical model of Alzheimer's disease
T2 - Scientific reports
J2 - Sci Rep
PY - 2026
DA - 2026/
VL - 16
IS - 1
SP - 23850
SN - 2045-2322
PB - Nature Publishing Group
DO - 10.1038/
UR - https://
LA - en
ER -
CSL-JSON
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"given": "Kasia M."
}
],
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The tracing map gets a citation of its own once an author has validated it and it has a DOI.
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