Singing to the newborn brain uncovers early traces of specialized neural networks.
The 1 match · it ties a paragraph to a whole file, not to given lines: a weak match, whose lines are not tinted
- [1] § Methods › Stimuli › Modulation spectra ↔ AMIspectrum.m, the whole file · a weak match · score 0.50 · AMi spectrum, amplitude modulation, envelope
Paper
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The authors' code
MATLAB · 88 lines · 2.7 KB · no license · 1 match
- function [AMIspec, fc, mf, step] = AMIspectrum(insig, fs, varargin)
- %AMIspectrum Amplitude modulation excitation pattern
- % [AMIspec, fc, mf, step] = AMIspectrum(insig, fs, varargin)
- % returns the AMi spectrum of signal insig, in excitation units (W).
- % fs: sampling frequency
- % AMIspec is a N-by-M function where N is the number of modulation
- % frequencies (mf) and M is the number of audio frequencies (fc).
- %
- % see Varnet et al. 2017 for more details
- %
- % Leo Varnet - 07/2023
- if nargin<2
- error('%s: Too few input arguments.',upper(mfilename));
- end;
- if ~isnumeric(insig)
- error('%s: insig must be numeric.',upper(mfilename));
- end;
- if ~isnumeric(fs) || ~isscalar(fs) || fs<=0
- error('%s: fs must be a positive scalar.',upper(mfilename));
- end;
- definput.import={'varnet2017'};
- definput.importdefaults={};
- do_silent = 1;
- [flags,kv] = ltfatarghelper({'flow','fhigh'},definput,varargin);
- % defines the modulation axis
- mflow = kv.mflow;
- mfhigh = kv.mfhigh;
- N_fsamples = kv.modbank_Nmod;
- % f_spectra_intervals = logspace(log10(mflow), log10(mfhigh), N_fsamples+1);
- % f_spectra = logspace(log10(sqrt(f_spectra_intervals(1)*f_spectra_intervals(2))), log10(sqrt(f_spectra_intervals(end)*f_spectra_intervals(end-1))), N_fsamples);
- % Number of steps in fractional octaves to go from mod_flow to mod_fhigh:
- % N_octave_steps = ceil(NthOct * log10(mod_fhigh/mod_flow)/log10(2));
- % mfc = mod_flow * 2.^((0:N_octave_steps)/NthOct); % includes one extra bin (because of the ceiling)
- % cutoff_oct = mfc*2^(-.5/NthOct); % half step down
- %%%
- t=(1:length(insig))/fs;
- %%% gammatone filtering
- [gamma_responses,fc] = auditoryfilterbank(insig,fs,kv.flow,kv.fhigh);
- f_bw = audfiltbw(fc);
- %%% AM extraction
- if do_silent == 0
- fprintf('E extraction\n');
- end
- E = abs(hilbert(squeeze(gamma_responses)));
- Nchan = length(fc);
- %%% AMi spectra
- if do_silent == 0
- fprintf('calculating envelope spectra\n');
- end
- % using the king2019_modfilterbank function
- [AMfilt, mf] = king2019_modfilterbank_updated(E,fs,'argimport',flags,kv);
- % % using the modfilterbank function
- % [AMfilt_temp, mf] = modfilterbank(E,fs,fc,'argimport',flags,kv);
- % AMfilt=nan(length(t),length(fc),length(mf));
- % for i=1:length(AMfilt_temp)
- % AMfilt(:,i,1:size(AMfilt_temp{i},2)) = abs(AMfilt_temp{i});
- % end
- AMrms = squeeze(sqrt(mean(AMfilt.^2,1)))*sqrt(2);%squeeze(rms(AMfilt,'dim',1));
- DC = squeeze(mean(E,1));%squeeze(rms(E,'dim',1));
- AMIspec = AMrms./(DC'*ones(1,length(mf)));%(AMrms.^2*sqrt(2))./(DC'.^2*ones(1,length(mf))); % check this line
- AMIspec = AMIspec';
- if nargout>3
- step.t = t;
- step.f_bw = f_bw;
- step.gamma_responses = gamma_responses;
- step.E = E;
- step.mf = mf;
- step.AMrms = AMrms';
- step.DC = DC;
- end
- end
AMIspectrum.m at commit f42e0f3, no license · at the source
Overview
- Department of Developmental Psychology and Socialisation, University of Padua, Padua, Italy
- Padova Neuroscience Center, Padua, Italy
- Laboratoire des Systèmes Perceptifs, Département d’Études Cognitives, École normale supérieure, PSL Research University, CNRS, 29 rue d’Ulm, 75005 Paris, France
- Department of Women’s and Children’s Health, University of Padua, Padua, Italy
- Institute of Pediatric Research Città della Speranza, Padua, Italy
- Integrative Neuroscience and Cognition Center, Université Paris Cité & CNRS, Paris, France
Abstract
The abstract is not reproduced here: the paper's license (CC BY-NC-ND) does not allow it. Read it in the paper, at the publisher or on Europe PMC.
Repository
Its files are read in the Code ↔ Paper reader above, with 1 match between paragraphs and lines of code.
LeoVarnet/TMST
f42e0f33f225bb23dd1820906212fb2798f7ed1e, 1 October 2025Availability: 1 check, the latest on 29 September 2026: the link answers
- 29 September 2026: the link answers
23 files
- AMIspectrum.m, MATLAB, 88 lines, 1 match
- AMscalogram.m, MATLAB, 106 lines
- AMspectrogram.m, MATLAB, 87 lines
- AMspectrum.m, MATLAB, 78 lines
- AMwavelet.m, MATLAB, 86 lines
- ExcitationPattern.m, MATLAB, 40 lines
- Utility/
Mspectra_basepath.m , MATLAB, 6 lines - arg_varnet2017.m, MATLAB, 34 lines
- demo/
demo_toolbox.m , MATLAB, 99 lines - f0Mscalogram.m, MATLAB, 124 lines
- f0Mspectrogram.m, MATLAB, 76 lines
- f0Mspectrum.m, MATLAB, 77 lines
- interpmean.m, MATLAB, 17 lines
- king2019_modfilterbank_u
pdated.m , MATLAB, 141 lines - legacy/
Convert_to_double_filese , MATLAB, 13 linesp.m - legacy/
Mspectra_set_YIN.m , MATLAB, 39 lines - legacy/
Mspectra_set_amtoolbox.m , MATLAB, 39 lines - legacy/
readfile_replace.m , MATLAB, 48 lines - legacy/
tmst_inferno.m , MATLAB, 268 lines - remove_artifacts_FM.m, MATLAB, 111 lines
- startup_TMST.m, MATLAB, 54 lines
- windowing.m, MATLAB, 29 lines
- README.md, Text, 70 lines
Code availability statement
The paper has a code availability statement. Its license (CC BY-NC-ND) does not allow reproducing it here; in short, from what the harvester recognized in it:
- it points to the authors' code: LeoVarnet/
TMST
Read it in the paper: doi.org/10.1038/s44271-026-00451-6.
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Its JSON (tracing-map.json) is deposited on Zenodo with its DOI once the map is validated.
Data
Datasets cited
Availability statements
The paper has a data availability statement and a code and data availability statement. Its license (CC BY-NC-ND) does not allow reproducing them here; in short, from what the harvester recognized in them:
- they point to a dataset: OSF qge6b
- they point to the authors' code: LeoVarnet/
TMST - they say that the data are available on request
Read them in the paper: doi.org/10.1038/s44271-026-00451-6.
Versions
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Version 1, 29 September 2026: the first record
Recorded: type, language, journal, volume, issue, pages, dates, 6 authors, 3 keywords, 1 funder, 62 references.
Cite
This paper
Marino, C., Gemignani, J., Varnet, L., Zanetto, L., Baraldi, E., & Gervain, J. (2026). Singing to the newborn brain uncovers early traces of specialized neural networks. Communications psychology, 4(1), 97. https://
BibTeX
@article{marino2026singi
author = {Marino, Caterina and Gemignani, Jessica and Varnet, Léo and Zanetto, Lorenzo and Baraldi, Eugenio and Gervain, Judit},
title = {{Singing to the newborn brain uncovers early traces of specialized neural networks}},
journal = {Communications psychology},
year = {2026},
month = apr,
volume = {4},
number = {1},
pages = {97},
publisher = {Nature Publishing Group},
issn = {2731-9121},
doi = {10.1038/
url = {https://
pmid = {41986646},
pmcid = {PMC13278952}
}
RIS
TY - JOUR
AU - Marino, Caterina
AU - Gemignani, Jessica
AU - Varnet, Léo
AU - Zanetto, Lorenzo
AU - Baraldi, Eugenio
AU - Gervain, Judit
TI - Singing to the newborn brain uncovers early traces of specialized neural networks
T2 - Communications psychology
J2 - Commun Psychol
PY - 2026
DA - 2026/
VL - 4
IS - 1
SP - 97
SN - 2731-9121
PB - Nature Publishing Group
DO - 10.1038/
UR - https://
LA - en
ER -
CSL-JSON
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"URL": "https://
"language": "en",
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