OSCR

Image-Based Meta- and Mega-Analysis (IBMMA): A Unified Framework for Large-Scale, Multi-Site, Neuroimaging Data Analysis

This page is built on request from the registry's record of the paper. The 6,000 most recent papers have a fuller page, built ahead of time, with the Code ↔ Paper reader, the tracing map and its validation, the record's versions, how to cite it and similar papers. This paper is older: its record, its code, its data and the requests about it are below.

Code

12 files of its code read; 5 matches between paragraphs and code. The Code ↔ Paper reader is built for the 6,000 most recent papers only: this paper's code is read at its source.

sundelinustc/IBMMA

License: GPL-3.0
State: the link answers
Copies: kept by the registry: this license allows it
Tools found in the code: Matplotlib, NiBabel, Nilearn, NumPy, pandas, SciPy, seaborn, statsmodels

Overview

Authors: Nick Steele, Rajendra A. Morey, Ahmed Hussain, Courtney Russell, Benjamin Suarez-Jimenez, Elena Pozzi, Hadis Jameei, Lianne Schmaal, Ilya M. Veer, Lea Waller, Neda Jahanshad, Sophia I. Thomopoulos, Lauren E. Salminen, Miranda Olff, Jessie L. Frijling, Dick J. Veltman, Saskia B.J. Koch, Laura Nawijn, Mirjam van Zuiden, Li Wang
and 79 other authorsYe Zhu, Gen Li, Dan J. Stein, Jonathan Ipser, Yuval Neria, Xi Zhu, Orren Ravid, Sigal Zilcha-Mano, Amit Lazarov, Ashley A. Huggins, Jennifer S. Stevens, Kerry Ressler, Tanja Jovanovic, Sanne J.H. van Rooij, Negar Fani, Sven C. Mueller, Anna R. Hudson, Judith K. Daniels, Anika Sierk, Antje Manthey, Henrik Walter, Nic J.A. van der Wee, Steven J.A. van der Werff, Robert R.J.M. Vermeiren, Christian Schmahl, Julia I. Herzog, Ivan Rektor, Pavel Říha, Milissa L. Kaufman, Lauren A. M. Lebois, Justin T. Baker, Isabelle M. Rosso, Elizabeth A. Olson, Anthony King, Israel Liberzon, Michael Angstadt, Nicholas D. Davenport, Seth G. Disner, Scott R. Sponheim, Thomas Straube, David Hofmann, Guangming Lu, Rongfeng Qi, Xin Wang, Austin Kunch, Hong Xie, Yann Quidé, Wissam El-Hage, Shmuel Lissek, Hannah Berg, Steven E. Bruce, Josh Cisler, Marisa Ross, Ryan J. Herringa, Daniel W. Grupe, Jack B. Nitschke, Richard J. Davidson, Christine Larson, Terri A. deRoon-Cassini, Carissa W. Tomas, Jacklynn M. Fitzgerald, Jeremy Elman, Matthew Panizzon, Carol E. Franz, Michael J. Lyons, William S. Kremen, Brandee Feola, Jennifer U. Blackford, Bunmi O. Olatunji, Geoffrey May, Steven M. Nelson, Evan M. Gordon, Chadi G. Abdallah, Ruth Lanius, Maria Densmore, Jean Théberge, Richard W.J. Neufeld, Paul M. Thompson, Delin Sun
Journal: bioRxiv (preprint)
Published: 17 June 2025
Type: Preprint
Status: code verified (how the code is found and verified)
DOI: 10.1101/2025.06.16.657725
License: CC BY
Institutions: Duke University (United States), Mental Illness Research, Education and Clinical Centers (United States), University of Rochester Medicine (United States), The University of Melbourne (Australia), Orygen (Australia), University of Amsterdam (Netherlands), Charité – Universitätsmedizin Berlin (Germany), Freie Universität Berlin (Germany), Humboldt-Universität zu Berlin (Germany), University of Southern California (United States), Amsterdam University Medical Centers (Netherlands), Amsterdam Neuroscience (Netherlands), De Viersprong (Netherlands), Amsterdam UMC Location Vrije Universiteit Amsterdam (Netherlands), Radboud University Nijmegen (Netherlands), Utrecht University (Netherlands), Chinese Academy of Sciences (China), Institute of Psychology, Chinese Academy of Sciences (China), University of Chinese Academy of Sciences (China), University of Cape Town (South Africa), Columbia University Irving Medical Center (United States), New York State Psychiatric Institute (United States), University of Haifa (Israel), Tel Aviv University (Israel), University of Arizona (United States), Winship Cancer Institute (United States), McLean Hospital (United States), Wayne State University (United States), Ghent University (Belgium), University of Groningen (Netherlands), Leiden University Medical Center (Netherlands), Central Institute of Mental Health (Germany), Medizinische Fakultät Mannheim (Germany), Central European Institute of Technology (Czechia), Masaryk University (Czechia), St. Anne's University Hospital Brno (Czechia), Center for Anxiety and Depression (United States), Harvard University (United States), University of Michigan (United States), Texas A&M University (United States), Minneapolis VA Health Care System (United States), University of Minnesota (United States), University of Münster (Germany), Nanjing General Hospital of Nanjing Military Command (China), Nanjing University (China), Nanjing Drum Tower Hospital (China), University of Toledo (United States), UNSW Sydney (Australia), Neuroscience Research Australia (Australia), Université de Tours (France), Inserm (France), University of Missouri–St. Louis (United States), The University of Texas at Austin (United States), Northwestern University (United States), University of Wisconsin–Madison (United States), University of Wisconsin–Milwaukee (United States), Medical College of Wisconsin (United States), Marquette University (United States), University of California San Diego (United States), Boston University (United States), VA San Diego Healthcare System (United States), Vanderbilt University Medical Center (United States), University of Nebraska Medical Center (United States), Vanderbilt University (United States), University of North Texas at Dallas (United States), Baylor University (United States), Texas A&M Health Science Center (United States), Washington University in St. Louis (United States), Baylor College of Medicine (United States), Yale University (United States), Western University (Canada)
Categories: fMRI (modality), other condition (population), methods / tools (subfield)

Data

No dataset cited, and no data link found.

Contribute

The authors of this paper can claim it and correct its record, and the maintainers of its code (its owner, or a public member of its organization) correct what it says of their repository; anyone signed in can ask for its removal. Every request goes to the registry's own machine, which answers it; your account page follows them.

Sign in with ORCID to claim this paper as one of its authors or correct its record: when the paper's metadata lists your ORCID iD, you are recognized at once. Maintainers of its code: sign in with GitHub, then claim the repository on your account page.

Add the badge to the code's README

OSCR: the badge of this paper

Authors and maintainers of this paper's code: the badge says what OSCR knows of the paper and links the code to this page. Paste one of these under the README's title. Keep the two marks around it: they let the badge be replaced in place, never added twice. Nothing is changed for you.

Markdown
<!-- oscr-badge:start -->
[![OSCR](https://openscicode.org/badge/doi/10.1101/2025.06.16.657725.svg)](https://openscicode.org/badge/doi/10.1101/2025.06.16.657725)
<!-- oscr-badge:end -->
reStructuredText
.. oscr-badge:start

.. image:: https://openscicode.org/badge/doi/10.1101/2025.06.16.657725.svg
   :target: https://openscicode.org/badge/doi/10.1101/2025.06.16.657725
   :alt: OSCR

.. oscr-badge:end
HTML
<!-- oscr-badge:start -->
<a href="https://openscicode.org/badge/doi/10.1101/2025.06.16.657725"><img src="https://openscicode.org/badge/doi/10.1101/2025.06.16.657725.svg" alt="OSCR"></a>
<!-- oscr-badge:end -->

On GitHub, open the README, choose Edit (the pencil), paste the snippet under the title, then "Commit changes".

Or let it be kept for you, once you choose it: oscr badge --write from the command line, or the GitHub Action in your repository's workflows. Every other form is on the badge page.

Request its removal

To ask for this record, the copies of its authors' scripts or its tracing map to be removed, use the removal request page: signed in, you say who you are, what to remove and why, then review and confirm the request. Published rules decide every request (how).