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Time-dependent adaptations of damaged neurons and their microenvironment in the regenerating adult zebrafish spinal cord.

Overview

  1. Department of Neuroscience, Karolinska Institutet, 171 77 Stockholm, Sweden
Institutions: Karolinska Institutet (Sweden)
Journal: Science advances, volume 12, issue 10, article eaea2882
Dates: received 4 July 2025; accepted 2 February 2026; published online 6 March 2026; in print March 2026
Type: Research article · Language: English
License: CC BY
Identifiers: DOI 10.1126/sciadv.aea2882 · PMID 41790887 · PMCID PMC12965314 · OpenAlex W7134136924
Open access: gold, a free copy (OpenAlex)
Status: data only
Categories: zebrafish (organism), other condition (population), cellular / molecular (subfield)
Methods: Statistics, Smoothing, state filtering, decompositions, Evoked potentials, fMRI & imaging
MeSH: Adaptation, Physiological*, Cellular Microenvironment*, Nerve Regeneration*, Neurons*, Spinal Cord*, Spinal Cord Injuries*, Spinal Cord Regeneration*, Animals, Axons, Chondroitin Sulfate Proteoglycans, Extracellular Matrix, Neuronal Plasticity, Zebrafish (* major topic)
Topic: Nerve injury and regeneration (Cellular and Molecular Neuroscience, Neuroscience), according to OpenAlex
Funding: Swedish Brain Foundation (FO2019-0011, FO2020-0003); StratNeuro (N/A); Swedish Research Council Formas (2015-03359, 2020-00943); Swedish Brain Foundation and Anna-Stina och John Mattsons Minnesstiftelse för sonen Johan (FO2021-0041); Olle Engkvists Foundation (203-0003); Karolinska Institute (N/A); Wenner-Gren Stiftelserna (FT2024-0002)
Citations: cited by 1 paper (Europe PMC); 87 references in the paper
Research resources: we used biotinylated WFA RRID:AB_2620171, RRID:SCR_000441, GraphPad Prism RRID:SCR_002798, were performed using ImageJ software RRID:SCR_003070, RRID:SCR_010279, Clampfit RRID:SCR_011323, RRID:SCR_014199, RRID:SCR_014284, Microsoft Excel RRID:SCR_016137, Adult wild-type zebrafish RRID:ZIRC_ZL1

Abstract

Spinal cord injury (SCI) triggers complex cellular and extracellular responses that disrupt neuronal connectivity and hinder repair. While mammals have limited regenerative abilities, zebrafish achieve functional recovery through coordinated neuroprotection and plasticity. Here, we examined how structural and functional adaptations of damaged spinal neurons interact with extracellular matrix (ECM) dynamics during regeneration in adult zebrafish. We found that injured neurons undergo reversible changes in cellular properties and synaptic input, mediated mainly by glutamatergic signaling. These modifications coincide with a transient ECM reorganization marked by increased deposition of chondroitin sulfate proteoglycans (CSPGs). Enzymatic CSPG degradation paradoxically partially impaired long-term axonal regrowth and locomotor recovery. Thus, CSPG-rich ECM exerts a dual role: initially restricting plasticity but subsequently supporting structural stabilization and regeneration. Our findings highlight a temporally coordinated interplay between neuronal excitability, synaptic remodeling, and ECM reorganization as key determinants of spinal cord repair, offering mechanistic insights for enhancing nervous system regeneration.

Reproduced under the paper's license (CC BY), from the paper cited above.

Code

The paper links to its data, not to its authors' code: see the Data section.

The paper's code and data availability statement is in the Data section.

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Data

Datasets cited

Data, code, and materials availability

All data and code needed to evaluate and reproduce the results in the paper are present in the paper and/or the Supplementary Materials. All data used for the analyses and figures in this study are publicly available in a permanent repository, Dryad (https://doi.org/10.5061/dryad.bnzs7h4qj). This study did not generate new materials.

Reproduced under the paper's license (CC BY), from the paper cited above.

Versions

The history of this record: each version stored by the harvester or made by a correction of its authors or of the maintainers of its code, and what changed in its facts. The texts of the paper (its abstract, its availability statements) are not part of it; versions that changed only those are not listed.

Version 1, 30 September 2026: the first record

Recorded: type, language, journal, volume, issue, pages, dates, 8 authors, 13 MeSH terms, 7 funders, 87 references, 10 RRIDs.

Cite

This paper

Lafouasse, L., Koutsogiannis, K., Dai, Y.-W. E., Del Vecchio, L., Pedroni, A., Tsagkogiannis, D., Habicher, J., & Ampatzis, K. (2026). Time-dependent adaptations of damaged neurons and their microenvironment in the regenerating adult zebrafish spinal cord. Science advances, 12(10), eaea2882. https://doi.org/10.1126/sciadv.aea2882

BibTeX

@article{lafouasse2026time,
author = {Lafouasse, Leslie and Koutsogiannis, Konstantinos and Dai, Yu-Wen E and Del Vecchio, Lisa and Pedroni, Andrea and Tsagkogiannis, Dimitrios and Habicher, Judith and Ampatzis, Konstantinos},
title = {{Time-dependent adaptations of damaged neurons and their microenvironment in the regenerating adult zebrafish spinal cord}},
journal = {Science advances},
year = {2026},
month = mar,
volume = {12},
number = {10},
pages = {eaea2882},
publisher = {American Association for the Advancement of Science},
issn = {2375-2548},
doi = {10.1126/sciadv.aea2882},
url = {https://doi.org/10.1126/sciadv.aea2882},
pmid = {41790887},
pmcid = {PMC12965314}
}

RIS

TY - JOUR
AU - Lafouasse, Leslie
AU - Koutsogiannis, Konstantinos
AU - Dai, Yu-Wen E
AU - Del Vecchio, Lisa
AU - Pedroni, Andrea
AU - Tsagkogiannis, Dimitrios
AU - Habicher, Judith
AU - Ampatzis, Konstantinos
TI - Time-dependent adaptations of damaged neurons and their microenvironment in the regenerating adult zebrafish spinal cord
T2 - Science advances
J2 - Sci Adv
PY - 2026
DA - 2026/03/06
VL - 12
IS - 10
SP - eaea2882
SN - 2375-2548
PB - American Association for the Advancement of Science
DO - 10.1126/sciadv.aea2882
UR - https://doi.org/10.1126/sciadv.aea2882
LA - en
ER -

CSL-JSON

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