OSCR

The EDC mixture "NeuroMix" alters neuroendocrine physiology, fatty food preference, and the central reward transcriptome.

Code ↔ Paper

2 matches between paragraphs of the paper and lines of its authors' code, computed by the harvester (lexical-v1). Click a colored paragraph or line to see its counterpart.

The 2 matches
  1. [1] § Materials and methods › Statistical analyses › Eigengene generation and trait prediction ↔ NMXseq_EigengeneAnalysis_2026.R, lines 212–299 · score 0.62 · Module membership, matrix, gene expression, Pearson, prcomp, Eigengenes
  2. [2] § Materials and methods › Statistical analyses › Enrichment analysis ↔ NMXseq_EigengeneAnalysis_2026.R, lines 2–43 · score 0.54 · Gene Ontology, FDR, gene expression, matching, GO term, clustering

Paper

Loaded from Europe PMC by your browser, not stored by OSCR: doi.org · Europe PMC

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The authors' code

R · 300 lines · 9.9 KB · no license · 2 matches

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It can be read at the source: NMXseq_EigengeneAnalysis_2026.R.

Overview

Authors: Emily N Hilz1, Nicholas R Gonzalez1, Elena Morales-Grahl1, Jahnabi Deka1, Dana L Sheinhaus1, Lindsay M Thompson1, Christopher D Kassotis2, Andrea C Gore1
  1. Department of Pharmacy, Division of Pharmacology and Toxicology, The University of Texas at Austin, Austin, TX 78712, USA
  2. Institute of Environmental Health Sciences and Department of Pharmacology, Wayne State University, Detroit, MI 48202, USA
Institutions: The University of Texas at Austin (United States); Wayne State University (United States)
Journal: Endocrinology, volume 167, issue 9, article bqag084
Dates: received 22 April 2026; accepted 24 July 2026; published online 1 August 2026; in print August 2026
Type: Research article · Language: English
License: CC BY-NC-ND
Identifiers: DOI 10.1210/endocr/bqag084 · PMID 42538733 · PMCID PMC13490871 · OpenAlex W7172112851
Open access: hybrid, a free copy (OpenAlex)
Status: code verified
Categories: genetics / omics (modality), rat (organism), cellular / molecular (subfield)
Methods: Statistics, Smoothing, state filtering, decompositions, Preprocessing, Connectivity
Keywords: endocrine-disrupting chemicals, obesogens, nucleus accumbens, appetitive behavior, thyroid, transcriptome
MeSH: Endocrine Disruptors*, Food Preferences*, Neurosecretory Systems*, Reward*, Transcriptome*, Animals, Female, Male, Obesity, Pregnancy, Rats, Rats, Sprague-Dawley, Thyroid Hormone Receptors beta, Thyroid Hormones (* major topic)
Topic: Effects and risks of endocrine disrupting chemicals (Health, Toxicology and Mutagenesis, Environmental Science), according to OpenAlex
Funding: NIH (K99 ES037720, R35 ES035024); ACG
Citations: not cited yet (Europe PMC); 102 references in the paper
Research resources: RRID:AB_2868475

Abstract

The abstract is not reproduced here: the paper's license (CC BY-NC-ND) does not allow it. Read it in the paper, at the publisher or on Europe PMC.

Repository

Its files are read in the Code ↔ Paper reader above, with 2 matches between paragraphs and lines of code.

emilyhilz/NeuroMix-2026

License: none: the authors keep all their rights
State: the link answers, verified on 26 September 2026
Evidence: files inventoried
Commit: fe24150f45328c13f0ebface0a30a763a7cebc5c, 13 August 2026
Languages: R (2)
Size: 3 files, 2 scripts
Software Heritage: not archived
Found in: the text, “Eigengene generation and trait prediction”
Holds: README
Not found: license file, CITATION.cff, environment file, tests, continuous integration, documentation
Tools: ggplot2 (2 files), tidyverse (2 files), car (1 file), lme4 (1 file), lmerTest (1 file), reshape2 (1 file)
Availability: 1 check, the latest on 26 September 2026: the link answers
  • 26 September 2026: the link answers
3 files, not copied: shown from their source

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Tracing map

Proposed by the machine: these links were found in the paper and verified at the source, without human review. The map will receive a Zenodo DOI once one of the paper's authors has validated it with their ORCID.

What the map holds:

  • 1 repository of the authors' code, each at its verified commit, with its license and how the link was found in the paper;
  • 2 scripts, each with its path and the digest of its content;
  • 2 matches between paragraphs of the paper and lines of the code (method lexical-v1);
  • neither the text of the paper nor the code itself.

Its JSON (tracing-map.json) is deposited on Zenodo with its DOI once the map is validated.

Data

No dataset and no data link were found in the paper.

Data availability statement

The paper has a data availability statement. Its license (CC BY-NC-ND) does not allow reproducing it here; in short, from what the harvester recognized in it:

  • it says that the data are available on request

Read it in the paper: doi.org/10.1210/endocr/bqag084.

Versions

The history of this record: each version stored by the harvester or made by a correction of its authors or of the maintainers of its code, and what changed in its facts. The texts of the paper (its abstract, its availability statements) are not part of it; versions that changed only those are not listed.

Version 1, 27 September 2026: the first record

Recorded: type, language, journal, volume, issue, pages, dates, 8 authors, 6 keywords, 14 MeSH terms, 2 funders, 96 references, 1 RRID.

Cite

This paper

Hilz, E. N., Gonzalez, N. R., Morales-Grahl, E., Deka, J., Sheinhaus, D. L., Thompson, L. M., Kassotis, C. D., & Gore, A. C. (2026). The EDC mixture "NeuroMix" alters neuroendocrine physiology, fatty food preference, and the central reward transcriptome. Endocrinology, 167(9), bqag084. https://doi.org/10.1210/endocr/bqag084

BibTeX

@article{hilz2026edc,
author = {Hilz, Emily N and Gonzalez, Nicholas R and Morales-Grahl, Elena and Deka, Jahnabi and Sheinhaus, Dana L and Thompson, Lindsay M and Kassotis, Christopher D and Gore, Andrea C},
title = {{The EDC mixture "NeuroMix" alters neuroendocrine physiology, fatty food preference, and the central reward transcriptome}},
journal = {Endocrinology},
year = {2026},
month = aug,
volume = {167},
number = {9},
pages = {bqag084},
publisher = {The Endocrine Society},
issn = {0013-7227},
doi = {10.1210/endocr/bqag084},
url = {https://doi.org/10.1210/endocr/bqag084},
pmid = {42538733},
pmcid = {PMC13490871}
}

RIS

TY - JOUR
AU - Hilz, Emily N
AU - Gonzalez, Nicholas R
AU - Morales-Grahl, Elena
AU - Deka, Jahnabi
AU - Sheinhaus, Dana L
AU - Thompson, Lindsay M
AU - Kassotis, Christopher D
AU - Gore, Andrea C
TI - The EDC mixture "NeuroMix" alters neuroendocrine physiology, fatty food preference, and the central reward transcriptome
T2 - Endocrinology
J2 - Endocrinology
PY - 2026
DA - 2026/08/01
VL - 167
IS - 9
SP - bqag084
SN - 0013-7227
PB - The Endocrine Society
DO - 10.1210/endocr/bqag084
UR - https://doi.org/10.1210/endocr/bqag084
LA - en
ER -

CSL-JSON

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