OSCR

Detection and Removal of Hyper-synchronous Artifacts in Massively Parallel Spike Recordings.

Overview

  1. Institute for Advanced Simulation (IAS-6), Jülich Research Centre, Jülich 52425, Germany
  2. RWTH Aachen University, Aachen 52062, Germany
  3. Faculty of Mathematics and Physics, Charles University, Prague 12116, Czechia
  4. Institut de Neurosciences de la Timone (INT), Aix-Marseille Université, CNRS, Marseille 13005, France
  5. Institute of Biological Information Processing (IBI-3), Jülich Research Centre, Jülich 52425, Germany
  6. Institute of Biology 2, RWTH Aachen University, Aachen 52074, Germany
  7. Faculty of Medicine, Institute of Experimental Epileptology and Cognition Research, University of Bonn, Bonn 53127, Germany
  8. JARA Brain Institute I (INM-10), Jülich Research Centre, Jülich 52425, Germany
  9. Theoretical Systems Neurobiology, RWTH Aachen University, Aachen 52056, Germany
Dates: received 18 February 2026; accepted 13 July 2026; published online 2 September 2026; in print 2 September 2026
Type: Research article · Language: English
License: CC BY
Identifiers: DOI 10.1523/jneurosci.0295-26.2026 · PMID 42532845 · PMCID PMC13540609 · OpenAlex W4390765553
Open access: hybrid, a free copy (OpenAlex)
Status: code verified
Categories: extracellular electrophysiology (units, LFP) (modality), mouse (organism), non-human primate (organism), systems (subfield)
Methods: Spectral & time-frequency, Machine learning, Connectivity, Single-unit activity, calcium imaging
Keywords: artifacts, electrophysiology, Neuropixel, preprocessing, spikes, Utah arrays
MeSH: Action Potentials*, Artifacts*, Neurons*, Animals, Female, Macaca mulatta, Male, Mice, Mice, Inbred C57BL (* major topic)
Journal subjects: Systems/Circuits
Topic: Neural dynamics and brain function (Cognitive Neuroscience, Neuroscience), according to OpenAlex
Funding: European Union Horizon 2020 (945539); Deutsche Forschungsgemeinschaft (DFG) (368482240/GRK2416, SPP 2041); International Research Project (IRP) (Vision-For-Action); OP JAK (CZ.02.01.01/00/22 010/0008220); NRW-network ’iBehave’ (NW21-049)
Citations: not cited yet (Europe PMC); 53 references in the paper
Research resources: RRID:SCR_003833

Abstract

Contemporary electrophysiology experiments often involve massively parallel recordings of neuronal activity using multi-electrode arrays. While researchers have been aware of artifacts arising from electric cross-talk between channels in setups for such recordings, systematic and quantitative assessment of the effects of those artifacts on the data quality has never been reported. Here we present, based on examination of electrophysiology recordings from multiple laboratories, that multi-electrode recordings of spiking activity commonly contain extremely precise (at the data sampling resolution) spike coincidences far above the chance level. The recordings analyzed here were obtained from two rhesus macaques (Macaca mulatta; one male, one female) and one male mouse (C57BL/6J). We derive, through modeling of the electric cross-talk, a systematic relation between the amount of such hyper-synchronous events (HSEs) in channel pairs and the correlation between the raw signals of those channels in the multi-unit activity frequency range (500–7,500 Hz). We show that whitening the band-pass filtered raw signals removes the above chance HSEs; strongly suggesting they originate from linear mixing of signals. Whitening should therefore be performed prior to spike sorting and any further analysis of precise spike correlation, otherwise analysis results may be considerably affected.

Reproduced under the paper's license (CC BY), from the paper cited above.

Code

No file of the authors' code could be read here: it is described below, and read at its source.

doi:10.12751/incf.ni2018.0019

License: none: the authors keep all their rights
State: the link answers, verified on 26 September 2026
Evidence: the link answers
Software Heritage: not checked
Found in: the references
Not found: README, license file, CITATION.cff, environment file, tests, continuous integration, documentation
Availability: 1 check, the latest on 26 September 2026: the link answers (HTTP 200)
  • 26 September 2026: the link answers (HTTP 200)

Tracing map

Proposed by the machine: these links were found in the paper and verified at the source, without human review. The map will receive a Zenodo DOI once one of the paper's authors has validated it with their ORCID.

What the map holds:

  • 1 repository of the authors' code, each at its verified commit, with its license and how the link was found in the paper;
  • 0 scripts, each with its path and the digest of its content;
  • no match between paragraphs and code yet;
  • neither the text of the paper nor the code itself.

Its JSON (tracing-map.json) is deposited on Zenodo with its DOI once the map is validated.

Data

No dataset and no data link were found in the paper.

Versions

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Version 1, 27 September 2026: the first record

Recorded: type, language, journal, volume, issue, pages, dates, 11 authors, 6 keywords, 9 MeSH terms, 5 funders, 49 references, 1 RRID.

Cite

This paper

Oberste-Frielinghaus, J., Morales-Gregorio, A., Essink, S., Kleinjohann, A., Köhler, C. A., Barthélemy, F., Riehle, A., Brochier, T., Musall, S., Ito, J., & Grün, S. (2026). Detection and Removal of Hyper-synchronous Artifacts in Massively Parallel Spike Recordings. The Journal of neuroscience : the official journal of the Society for Neuroscience, 46(35), e0295262026. https://doi.org/10.1523/jneurosci.0295-26.2026

BibTeX

@article{oberstefrielinghaus2026detection,
author = {Oberste-Frielinghaus, Jonas and Morales-Gregorio, Aitor and Essink, Simon and Kleinjohann, Alexander and Köhler, Cristiano A. and Barthélemy, Frederic and Riehle, Alexa and Brochier, Thomas and Musall, Simon and Ito, Junji and Grün, Sonja},
title = {{Detection and Removal of Hyper-synchronous Artifacts in Massively Parallel Spike Recordings}},
journal = {The Journal of neuroscience : the official journal of the Society for Neuroscience},
year = {2026},
month = sep,
volume = {46},
number = {35},
pages = {e0295262026},
publisher = {Society for Neuroscience},
issn = {0270-6474},
doi = {10.1523/jneurosci.0295-26.2026},
url = {https://doi.org/10.1523/jneurosci.0295-26.2026},
pmid = {42532845},
pmcid = {PMC13540609}
}

RIS

TY - JOUR
AU - Oberste-Frielinghaus, Jonas
AU - Morales-Gregorio, Aitor
AU - Essink, Simon
AU - Kleinjohann, Alexander
AU - Köhler, Cristiano A.
AU - Barthélemy, Frederic
AU - Riehle, Alexa
AU - Brochier, Thomas
AU - Musall, Simon
AU - Ito, Junji
AU - Grün, Sonja
TI - Detection and Removal of Hyper-synchronous Artifacts in Massively Parallel Spike Recordings
T2 - The Journal of neuroscience : the official journal of the Society for Neuroscience
J2 - J Neurosci
PY - 2026
DA - 2026/09/02
VL - 46
IS - 35
SP - e0295262026
SN - 0270-6474
PB - Society for Neuroscience
DO - 10.1523/jneurosci.0295-26.2026
UR - https://doi.org/10.1523/jneurosci.0295-26.2026
LA - en
ER -

CSL-JSON

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