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Attenuation of typical sex differences in the time-resolved functional connectivity of the fusiform gyrus in autism

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Paper

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The authors' code

MATLAB · 42 lines · 1.1 KB · Apache-2.0

  1. function [dis_final] = mCAP_CAP_CompareSeeds(seed1,seed2)
  2. seed1=double(seed1);
  3. seed2=double(seed2);
  4. % Cosine distance between seeds
  5. DIS = pdist2(seed1',seed2','cosine');
  7. n_voxels = sum(sum(seed1));
  9. % Matching pairs
  10. IDX = munkres(DIS);
  12. idxk = 1;
  14. for k=1:size(DIS,1)
  15. if sum(IDX(k,:)) == 1
  16. dis_final(idxk) = DIS(k,IDX(k,:));
  17. idxk = idxk + 1;
  18. else
  20. end
  21. end
  23. dis_final = dis_final;%/n_voxels;
  26. %% check all the points
  27. end
  30. % Copyright 2023 Farnaz Delavari
  31. %
  32. % Licensed under the Apache License, Version 2.0 (the "License");
  33. % you may not use this file except in compliance with the License.
  34. % You may obtain a copy of the License at
  35. %
  36. % http://www.apache.org/licenses/LICENSE-2.0
  37. %
  38. % Unless required by applicable law or agreed to in writing, software
  39. % distributed under the License is distributed on an "AS IS" BASIS,
  40. % WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
  41. % See the License for the specific language governing permissions and
  42. % limitations under the License.

mCAP_CAP_CompareSeeds.m at commit 643a24b, under Apache-2.0 · at the source

Overview

Authors: Dorothea L. Floris1,2,3, Luigi F. Saccaro4,5,6, Farnaz Delavari6,7, Dawid Strzelczyk1, Bruno Hebling Vieira1, Camille Elleaume1, Charlotte M. Pretzsch8, Christine Ecker9, Tobias Banaschewski10,11, Rosemary J. Holt12, Simon Baron-Cohen12, Thomas Bourgeron13, Tony Charman14, Eva Loth8,15, Declan G. M. Murphy8,15, Jan K. Buitelaar2,3,16, Christian F. Beckmann2,3,17, Dimitri Van De Ville6,18, the APEX Consortium19, the EU-AIMS LEAP group20, Nicolas Langer1,21
ORCID iDs: Dorothea L. Floris, Luigi F. Saccaro, Farnaz Delavari, Tony Charman
21 affiliations
  1. Methods of Plasticity Research, Department of Psychology, University of Zurich, Zurich, Switzerland
  2. Donders Institute for Brain, Cognition, and Behavior, Radboud University Nijmegen, Nijmegen, The Netherlands
  3. Department for Cognitive Neuroscience, Radboud University Medical Center, Nijmegen, The Netherlands
  4. Faculty of Medicine, Psychiatry Department, University of Geneva, Geneva, Switzerland
  5. Psychiatry Department, Geneva University Hospital, Geneva, Switzerland
  6. Neuro-X Institute, Ecole Polytechnique Fédérale de Lausanne, Geneva, Switzerland
  7. Department of Diagnostic and Interventional Radiology, Lausanne University Hospital (CHUV), Lausanne, Switzerland
  8. Department of Forensic and Neurodevelopmental Sciences, Institute of Psychiatry, Psychology and Neuroscience, King’s College London, London, UK
  9. Department of Child and Adolescent Psychiatry, University Hospital, Goethe University, Frankfurt am Main, Germany
  10. Department of Child and Adolescent Psychiatry, Central Institute of Mental Health, Medical Faculty Mannheim, University of Heidelberg, Mannheim, Germany
  11. German Center for Mental Health (DZPG), partner site Mannheim-Heidelberg-Ulm
  12. Autism Research Centre, Department of Psychiatry, University of Cambridge, Cambridge, UK
  13. Institut Pasteur, Human Genetics and Cognitive Functions Unit, Paris, France
  14. Department of Psychology, Institute of Psychiatry, Psychology and Neuroscience, King’s College London, London, UK
  15. Institute for Translational Neurodevelopment, Institute of Psychiatry, Psychology & Neuroscience, King’s College London, London, UK
  16. Karakter Child and Adolescent Psychiatry University Centre, Nijmegen, The Netherlands
  17. Wellcome Centre for Integrative Neuroimaging (WIN FMRIB), University of Oxford, Oxford, UK
  18. Department of Radiology and Medical Informatics, University of Geneva, Geneva, Switzerland
  19. The Autism and Prenatal Sex Differences consortium. Group authorship; see acknowledgments
  20. The Longitudinal European Autism Project. Group authorship – see acknowledgments
  21. Neuroscience Center Zurich (ZNZ), Zurich, Switzerland
Institutions: University of Zurich (Switzerland); Donders Institute for Brain, Cognition and Behaviour (Netherlands); Radboud University Nijmegen (Netherlands); Radboud University Medical Center (Netherlands); University of Geneva (Switzerland); University Hospital of Geneva (Switzerland); École Polytechnique Fédérale de Lausanne (Switzerland); Centre Hospitalier Universitaire Vaudois (Switzerland); King's College London (United Kingdom); Goethe University Frankfurt (Germany); Central Institute of Mental Health (Germany); Deutsches Zentrum für Psychische Gesundheit (Germany); University of Cambridge (United Kingdom); Institut Pasteur (France); Wellcome Centre for Integrative Neuroimaging (United Kingdom); University of Oxford (United Kingdom)
Journal: medRxiv (preprint)
Dates: published online 3 June 2026
Type: Preprint
License: CC BY-NC-ND
Identifiers: DOI 10.64898/2026.06.02.26354318 · OpenAlex W7163554583
Open access: green, a free copy (OpenAlex)
Status: code verified
Categories: fMRI (modality), autism (population)
Methods: Statistics, Smoothing, state filtering, decompositions, Machine learning, fMRI & imaging
Topic: Functional Brain Connectivity Studies (Cognitive Neuroscience, Neuroscience), according to OpenAlex
Funding: National Institute for Health Research (NIHR) (NIHR203312); Wellcome Trust (098369/Z/12/Z, 214322)
Citations: not cited yet (Europe PMC); 100 references in the paper

Abstract

The abstract is not reproduced here: the paper's license (CC BY-NC-ND) does not allow it. Read it in the paper, at the publisher or on Europe PMC.

Repository

Its files are read in the Code ↔ Paper reader above.

MIPLabCH/mCAP

License: Apache-2.0
State: the link answers, verified on 27 September 2026
Evidence: files inventoried
Commit: 643a24b4cabcb0b410126f4d11fcea71202086ca, 23 November 2024
Languages: MATLAB (10)
Size: 13 files, 10 scripts
Software Heritage: not archived
Found in: the text, “Micro co-activation pattern analysis”
Holds: README, license file
Not found: CITATION.cff, environment file, tests, continuous integration, documentation
Tools: Statistics and Machine Learning Toolbox (6 files), Parallel Computing Toolbox (3 files)
Availability: 1 check, the latest on 27 September 2026: the link answers
  • 27 September 2026: the link answers
12 files
At the source: github.com/MIPLabCH/mCAP

Tracing map

Proposed by the machine: these links were found in the paper and verified at the source, without human review. The map will receive a Zenodo DOI once one of the paper's authors has validated it with their ORCID.

What the map holds:

  • 1 repository of the authors' code, each at its verified commit, with its license and how the link was found in the paper;
  • 10 scripts, each with its path and the digest of its content;
  • no match between paragraphs and code yet;
  • neither the text of the paper nor the code itself.

Its JSON (tracing-map.json) is deposited on Zenodo with its DOI once the map is validated.

Data

No dataset and no data link were found in the paper.

Versions

The history of this record: each version stored by the harvester or made by a correction of its authors or of the maintainers of its code, and what changed in its facts. The texts of the paper (its abstract, its availability statements) are not part of it; versions that changed only those are not listed.

Version 2, 28 September 2026

  • Authors: added Luigi F. Saccaro (0000-0001-6703-6890); Farnaz Delavari (0000-0003-2990-4372); Tony Charman (0000-0003-1993-6549); removed Luigi F. Saccaro; Farnaz Delavari; Tony Charman

Version 1, 27 September 2026: the first record

Recorded: type, journal, dates, 21 authors, 2 funders, 99 references.

Cite

This paper

Floris, D. L., Saccaro, L. F., Delavari, F., Strzelczyk, D., Vieira, B. H., Elleaume, C., Pretzsch, C. M., Ecker, C., Banaschewski, T., Holt, R. J., Baron-Cohen, S., Bourgeron, T., Charman, T., Loth, E., Murphy, D. G. M., Buitelaar, J. K., Beckmann, C. F., Van De Ville, D., the APEX Consortium, . . . Langer, N. (2026). Attenuation of typical sex differences in the time-resolved functional connectivity of the fusiform gyrus in autism. medRxiv (preprint). https://doi.org/10.64898/2026.06.02.26354318

BibTeX

@article{floris2026attenuation,
author = {Floris, Dorothea L. and Saccaro, Luigi F. and Delavari, Farnaz and Strzelczyk, Dawid and Vieira, Bruno Hebling and Elleaume, Camille and Pretzsch, Charlotte M. and Ecker, Christine and Banaschewski, Tobias and Holt, Rosemary J. and Baron-Cohen, Simon and Bourgeron, Thomas and Charman, Tony and Loth, Eva and Murphy, Declan G. M. and Buitelaar, Jan K. and Beckmann, Christian F. and Van De Ville, Dimitri and {the APEX Consortium} and {the EU-AIMS LEAP group} and Langer, Nicolas},
title = {{Attenuation of typical sex differences in the time-resolved functional connectivity of the fusiform gyrus in autism}},
journal = {medRxiv (preprint)},
year = {2026},
month = jun,
publisher = {medRxiv},
doi = {10.64898/2026.06.02.26354318},
url = {https://doi.org/10.64898/2026.06.02.26354318}
}

RIS

TY - JOUR
AU - Floris, Dorothea L.
AU - Saccaro, Luigi F.
AU - Delavari, Farnaz
AU - Strzelczyk, Dawid
AU - Vieira, Bruno Hebling
AU - Elleaume, Camille
AU - Pretzsch, Charlotte M.
AU - Ecker, Christine
AU - Banaschewski, Tobias
AU - Holt, Rosemary J.
AU - Baron-Cohen, Simon
AU - Bourgeron, Thomas
AU - Charman, Tony
AU - Loth, Eva
AU - Murphy, Declan G. M.
AU - Buitelaar, Jan K.
AU - Beckmann, Christian F.
AU - Van De Ville, Dimitri
AU - the APEX Consortium
AU - the EU-AIMS LEAP group
AU - Langer, Nicolas
TI - Attenuation of typical sex differences in the time-resolved functional connectivity of the fusiform gyrus in autism
T2 - medRxiv (preprint)
J2 - medRxiv
PY - 2026
DA - 2026/06/03
PB - medRxiv
DO - 10.64898/2026.06.02.26354318
UR - https://doi.org/10.64898/2026.06.02.26354318
ER -

CSL-JSON

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