Every paper, by date: page 38

44,644 papers with a page: 24,189 with their authors' code, 4,955 with code on request, 15,495 with data only. The most recent first, 224 a page. Page 38 of 200: 20 January 2026 to 13 January 2026.

Tuesday, 20 January 2026 (45 papers, 42 on this page)

[8289] doi:10.1016/j.isci.2026.114737 [paper, data]

Tau and Futsch play non-neuronal roles in mediating morphogenesis and function of <i>Drosophila</i> Malpighian tubules.

Journal: iScience

Status: code on request, 3 datasets cited

[8290] doi:10.1016/j.isci.2026.114753 [paper]

Prelimbic cortex-basolateral amygdala glutamatergic circuit drives cancer-induced bone pain in mice.

Journal: iScience

Status: code on request

[8291] doi:10.1016/j.isci.2026.114758 [paper, repository]

Heterozygous <i>ADAR</i> mutant mice exhibit RNA sensing-dependent neuroinflammation and phenotypes associated with Aicardi-Goutières syndrome.

Journal: iScience

Authors' code: alexdobin/STAR (MIT)

Status: code verified, 331 files readable

[8292] doi:10.1016/j.nicl.2026.103952 [paper, repository]

Structural network topology and cognitive control in very preterm born young adults.

Journal: NeuroImage. Clinical

Authors' code: OSF 2nvdp (no license)

Status: code found, still to be checked

[8293] doi:10.1016/j.xinn.2026.101272 [paper]

Plasma p-Tau217 improves diagnostic accuracy and clinician confidence in cognitive disorder classification.

Journal: Innovation (Cambridge (Mass.))

Status: code on request

[8294] doi:10.1016/j.ynirp.2026.100318 [paper, repository]

Neurobiological and psychological indicators of post-traumatic stress symptoms in children and adolescents treated for a posterior fossa brain tumour.

Journal: Neuroimage. Reports

Authors' code: m-ama/pydesigner (MIT), mic-dkfz/tractseg (Apache-2.0)

Status: code verified, 152 files readable, 4 matches

[8295] doi:10.1038/s41467-025-68042-3 [paper, repository]

Dynamical modulation of hippocampal replay through firing rate adaptation.

Journal: Nature communications

Authors' code: Zenodo 17488344 (MIT), zilongji/adaptiveattractorforsequences (MIT)

Status: code verified, 127 files readable, 2 matches

[8296] doi:10.1038/s41467-026-68483-4 [paper, repository]

Cryo-electron tomography reveals coupled flavivirus replication, budding and maturation.

Journal: Nature communications

Authors' code: grotjahnlab/surface_morphometrics (GPL-3.0)

Status: code verified, 86 files readable, 2 matches

[8297] doi:10.1038/s41467-026-68641-8 [paper, data]

C1q-dependent clearance of alpha-synuclein allows macrophages to transiently limit enteric synucleinopathy in male mice.

Journal: Nature communications

Status: data only, 1 dataset cited

[8298] doi:10.1038/s41593-025-02190-z [paper, repository]

A prefrontal cortex map based on single-neuron activity.

Journal: Nature neuroscience

Authors' code: cortex-lab/allenCCF (no license), hejDMC/pfcmap (BSD-2-Clause), Zenodo 17559037 (CC-BY-4.0)

Status: code verified, 380 files readable, 17 matches

[8299] doi:10.1038/s41597-026-06564-1 [paper, repository]

Human brain MRI data of intrathecally injected tracer evolution over 72 hours for data-integrated simulations.

Journal: Scientific data

Authors' code: pyushkevich/greedy (Apache-2.0), SVMTK/SVMTK (GPL-3.0), jorgenriseth/gMRI2FEM (MIT), jorgenriseth/gonzo (no license), timokoch/dumux-braindiffusion-miniapp (GPL-3.0), Zenodo 17760932 (CC-BY-4.0), Zenodo 16677013 (MIT)

Status: code verified, 392 files readable, 15 matches

[8300] doi:10.1038/s41597-026-06579-8 [paper, repository]

Kymata Soto Language Dataset: an electro-magnetoencephalographic dataset for natural speech processing.

Journal: Scientific data

Authors' code: OSF 45dcg (no license)

Status: empty repository

[8301] doi:10.1038/s41598-025-32207-3 [paper, repository]

Multi-scale EEG feature decoding with Swin Transformers for subject independent motor imagery BCIs.

Journal: Scientific reports

Authors' code: WasiUrRehmanQamar/CCST (no license)

Status: code verified, 7 files readable, 14 matches

[8302] doi:10.1038/s41598-026-35883-x [paper, data]

The ERP characteristics in the process of hazard identification.

Journal: Scientific reports

Status: data only, 1 dataset cited

[8303] doi:10.1038/s41598-026-36296-6 [paper, data]

Integrative multimodal hybrid data fusion for mortality prediction.

Journal: Scientific reports

Status: data only, 3 datasets cited

[8304] doi:10.1038/s42003-026-09558-2 [paper, repository]

HCN channels reveal conserved and divergent physiology in supragranular pyramidal neurons in primate species.

Journal: Communications biology

Authors' code: AllenInstitute/MIES (BSD-2-Clause), Zenodo 17956083 (CC-BY-4.0)

Status: code verified, 59 files readable

[8305] doi:10.1038/s42255-025-01429-0 [paper, repository]

Distinct sympathetic projections to brown fat regulate thermogenesis and glucose tolerance.

Journal: Nature metabolism

Authors' code: DanieleN90/Sympathetic-control-of-brown-fat (no license)

Status: code verified, 16 files readable, 7 matches

[8306] doi:10.1073/pnas.2511800123 [paper, repository]

Differential <i>Hes1</i> activation defines neural stem cell lineage commitment and niche maintenance in embryonic and adult mouse cortex.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: ncbi.nlm.nih.gov/traces/study (no license), Zenodo 15308921 (CC-BY-4.0), Zenodo 17176557 (CC-BY-4.0)

Status: code verified, 22 files readable, 8 matches

[8307] doi:10.1073/pnas.2522768123 [paper, repository]

A neural circuit basis for reward-induced suppression of fear generalization and enhancement of fear extinction.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: zweifellab/ephys (GPL-2.0)

Status: code verified, 9 files readable

[8308] doi:10.1088/1741-2552/ae33f6 [paper, repository]

Automated 3D segmentation of human vagus nerve fascicles and epineurium from micro-computed tomography images using anatomy-aware neural networks.

Journal: Journal of neural engineering

Authors' code: Shofflab/vagus-nerve-3d-segmentation (no license)

Status: code verified, 20 files readable, 9 matches

[8309] doi:10.1093/braincomms/fcaf509 [paper, repository]

Brain age trajectories and cognition after stroke in two longitudinal cohorts.

Journal: Brain communications

Authors' code: estenhl/pyment-public (CC-BY-NC-4.0), gislebh/Brain_age (no license)

Status: code verified, 69 files readable, 2 matches

[8310] doi:10.1093/braincomms/fcag017 [paper, data]

Quantitative susceptibility mapping in myotonic dystrophy: clinical relevance of subcortical iron accumulation.

Journal: Brain communications

Status: data only, 1 dataset cited

[8311] doi:10.1093/braincomms/fcag018 [paper, repository]

White matter microstructure alterations from alcohol use disorder persist into early abstinence.

Journal: Brain communications

Authors' code: DelinteNicolas/AUD_microstructure (GPL-3.0), Zenodo 10514465 (apgl-v3), Zenodo 7753501 (GPL-3.0), hyedryn/elikopy (AGPL-3.0), delintenicolas/unravel (GPL-3.0)

Status: code verified, 43 files readable, 10 matches

[8312] doi:10.1093/psyrad/kkag003 [paper, repository]

Dynamic brain lateralization patterns in Chinese naturalistic language comprehension and association with sex differences: a 7T functional magnetic resonance imaging study.

Journal: Psychoradiology

Authors' code: fxsjy/jieba (MIT), Embedding/Chinese-Word-Vectors (Apache-2.0)

Status: code verified, 66 files readable, 1 match

[8313] doi:10.1117/1.nph.13.1.015004 [paper, repository]

Cellular multipoint adaptive technology for two-photon mesoscope.

Journal: Neurophotonics

Authors' code: cssyyyjl/CMAT-PAPER_DATA (no license)

Status: code verified

[8314] doi:10.1117/1.nph.13.1.015005 [paper, repository]

Group-level test-retest reliability assessment using systemic physiology augmented functional near-infrared spectroscopy during a passive-listening task.

Journal: Neurophotonics

Authors' code: abbiem37/spa-fnirs_group-level_test-retest_reliability (no license)

Status: code verified, 4 files readable, 3 matches

[8315] doi:10.1117/1.nph.13.s1.s13007 [paper, repository]

Cross-paradigm fNIRS brain activity in 1-month-old infants across The Gambia and the United Kingdom.

Journal: Neurophotonics

Authors' code: globalfnirs (no license)

Status: code verified

[8316] doi:10.1128/spectrum.00744-25 [paper, data]

Monocolonization with <i>Bacteroides thetaiotaomicron</i> exerts region-specific effects on Alzheimer's disease-related traits in the murine brain.

Journal: Microbiology spectrum

Status: data only, 1 dataset cited

[8317] doi:10.1162/imag.a.1099 [paper, repository]

Multi-site harmonization for magnetoencephalography spectral power data.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: nih-megcore/enigma_MEG (no license), nugenta/MEG-Harmonize (Unlicense), nih-megcore/MegNet (BSD-3-Clause), Zenodo 14616848 (no license)

Status: code verified, 151 files readable, 3 matches

[8318] doi:10.1186/s12964-026-02661-1 [paper, data]

PAC regulates endo-, and exocytosis, and lysosomal-mitochondrial stress signaling in human mast cells.

Journal: Cell communication and signaling : CCS

Status: data only, 2 datasets cited

[8319] doi:10.1186/s12974-025-03685-z [paper, data]

Compromised hepatic bilirubin clearance drives depressive symptoms via regulating microglial engulfment of dendritic spines.

Journal: Journal of neuroinflammation

Status: data only, 1 dataset cited

[8320] doi:10.1186/s40478-026-02223-z [paper, repository]

Brain and circulating EV proteome signatures in schizophrenia as prognostic markers for age-related dementia.

Journal: Acta neuropathologica communications

Authors' code: joseasanchezmilan/sz_dm](https: (no license)

Status: dead link

[8321] doi:10.1371/journal.pbio.3003614 [paper, repository]

Characterization of the spatiotemporal representations of visual, semantic, and memorability features in the human brain.

Journal: PLoS biology

Authors' code: neurotechcenter/VERA (MIT), OSF muq48 (no license)

Status: code verified, 645 files readable, 4 matches

[8322] doi:10.1371/journal.pcbi.1013273 [paper, repository]

Therapeutic targeting of oligodendrocytes in an agent-based model of multiple sclerosis.

Journal: PLoS computational biology

Authors' code: Georgia-Weatherley/MS_ABM_Weatherley (MIT)

Status: code verified, 28 files readable, 2 matches

[8323] doi:10.1371/journal.pcbi.1013831 [paper, repository]

Anatomically aware simulation of patient-specific glioblastoma xenografts.

Journal: PLoS computational biology

Authors' code: maadam-123/mouse_xenograft_gbm_simulation (MIT)

Status: code verified, 7 files readable, 4 matches

[8324] doi:10.1371/journal.pone.0340286 [paper, repository]

FetCAT: Cross-attention fusion of transformer-CNN architecture for fetal brain plane classification with explainability using motion-degraded MRI.

Journal: PloS one

Authors' code: SuhaAlam/FetCAT (no license)

Status: code verified, 2 files readable, 9 matches

[8325] doi:10.1515/biol-2025-1253 [paper, data]

Resveratrol modulates FABP5 to reduce neuronal apoptosis following ischemic stroke.

Journal: Open life sciences

Status: data only, 1 dataset cited

[8326] doi:10.3390/ijms27021008 [paper, data]

Design, Synthesis, and Biological Evaluation of Novel Acetylcholinesterase and β-Secretase 1 Inhibitors.

Journal: International journal of molecular sciences

Status: data only, 2 datasets cited

[8327] doi:10.3390/molecules31020366 [paper, repository]

Computational Identification of Blood-Brain Barrier-Permeant Microbiome Metabolites with Binding Affinity to Neurotransmitter Receptors in Neurodevelopmental Disorders.

Journal: Molecules (Basel, Switzerland)

Authors' code: figshare 30494093 (MIT)

Status: code verified, 2 files readable

[8328] doi:10.3390/s26020687 [paper, data]

Efficient EEG-Based Person Identification: A Unified Framework from Automatic Electrode Selection to Intent Recognition.

Journal: Sensors (Basel, Switzerland)

Status: data only, 1 dataset cited

[8329] doi:10.7554/elife.99688 [paper, repository]

Modeling and simulation of neocortical micro- and mesocircuitry (Part I, anatomy).

Journal: eLife

Authors' code: Zenodo 8165004 (CC-BY-4.0)

Status: code verified

[8330] doi:10.7554/elife.99693 [paper, repository]

Modeling and simulation of neocortical micro- and mesocircuitry (Part II, Physiology and experimentation).

Journal: eLife

Authors' code: BlueBrain (no license), BlueBrain/singlecell-emodel-suite (no license), Zenodo 7930276 (CC-BY-NC-4.0), BlueBrain/connectome-manipulator (Apache-2.0), Zenodo 10677883 (CC-BY-4.0), Zenodo 17793038 (CC-BY-4.0), Zenodo 6906784 (CC-BY-NC-4.0), Zenodo 8165004 (CC-BY-4.0)

Status: code verified, 99 files readable, 2 matches

Monday, 19 January 2026 (35 papers)

[8331] doi:10.1002/aur.70180 [paper, data]

Reduced Hand Specialization and Idiosyncratic Visuomotor Strategies in Autism During Naturalistic Object Manipulation.

Journal: Autism research : official journal of the International Society for Autism Research

Status: data only, 1 dataset cited

[8332] doi:10.1002/epi.70101 [paper, repository]

Development and validation of a deep survival model to predict time to seizure from routine electroencephalography.

Journal: Epilepsia

Authors' code: chum-epilepsy/epi_surv (no license)

Status: code verified, 23 files readable, 3 matches

[8333] doi:10.1002/epi.70104 [paper, repository]

Spectral entropy variability of intraoperative electrocorticography predicts outcome after epilepsy surgery in people with focal cortical dysplasia.

Journal: Epilepsia

Authors' code: UMCU-EpiLAB/umcuEpi_ioECoG_SpectralEntropy (GPL-3.0)

Status: code verified, 3 files readable

[8334] doi:10.1007/s12021-025-09763-0 [paper]

Deep Learning-Based Classification of Temporal Stages of AT8-Labeled Tau Pathology After Experimental Traumatic Brain Injury.

Journal: Neuroinformatics

Status: code on request

[8335] doi:10.1016/j.celrep.2025.116857 [paper]

Metabolic reprogramming during human neuron differentiation indicates glutaminase as a key determinant in Fragile X syndrome.

Journal: Cell reports

Status: code on request

[8336] doi:10.1016/j.isci.2026.114731 [paper]

Frequency-specific electromagnetic modulation of brain redox state precedes cortical activity in stroke recovery.

Journal: iScience

Status: code on request

[8337] doi:10.1016/j.neuroimage.2026.121736 [paper, repository]

Differential representations of spatial environments in mPFC and hippocampus underpinning flexible navigation.

Journal: NeuroImage

Authors' code: OSF 6amqx (no license)

Status: empty repository

[8338] doi:10.1016/j.nicl.2026.103954 [paper]

Structural correlates of aphasia severity, cognitive impairment, and outcome after stroke.

Journal: NeuroImage. Clinical

Status: code on request

[8339] doi:10.1016/j.xpro.2025.104342 [paper, repository]

Protocol for minimizing off-target neuronal activation during optical stimulation in vivo.

Journal: STAR protocols

Authors' code: Zenodo 13842774 (CC-BY-4.0), Zenodo 17306097 (CC-BY-4.0), simonweiler/opto_light_leakage (no license)

Status: code verified, 9 files readable, 2 matches

[8340] doi:10.1038/s41380-025-03417-y [paper, repository]

Single-cell characterization of the adult male hippocampus suggests a prominent, and cell-type specific, role for Nrgn and Sgk1 in response to a social stressor.

Journal: Molecular psychiatry

Authors' code: theislab/MRGR_stress_analysis (MIT)

Status: code verified, 9 files readable, 7 matches

[8341] doi:10.1038/s41467-026-68325-3 [paper, repository]

Glycerol 3-phosphate acyltransferase exacerbates α-synuclein-induced toxicity by increasing lipid peroxidation.

Journal: Nature communications

Authors' code: rmd13/FlyBrain_PAM_TH_DAPI_Labkit (no license), sg-s/fly-spotter (GPL-3.0)

Status: code verified, 11 files readable, 1 match

[8342] doi:10.1038/s41467-026-68351-1 [paper, repository]

Central amygdala single-nucleus atlas reveals chromatin and gene transcription dynamics in human alcohol use disorder.

Journal: Nature communications

Authors' code: mjgirgenti/AUDsnCEA (no license)

Status: code verified, 35 files readable, 8 matches

[8343] doi:10.1038/s41467-026-68403-6 [paper, data]

Pragmatic representations of self- and others' action in the monkey putamen.

Journal: Nature communications

Status: data only, 1 dataset cited

[8344] doi:10.1038/s41467-026-68453-w [paper, repository]

Model-agnostic linear-memory online learning in spiking neural networks.

Journal: Nature communications

Authors' code: chaobrain/braintrace-snn-experiments (no license), braintrace.readthedocs.io (no license), chaobrain/fitting_drosophila_whole_brain_spiking_model (no license), chaobrain/braintrace-shd-experiments (no license), Zenodo 17847403 (CC-BY-4.0), Zenodo 17892849 (CC-BY-4.0), Zenodo 17791424 (CC-BY-4.0)

Status: code verified, 96 files readable, 14 matches

[8345] doi:10.1038/s41467-026-68473-6 [paper, repository]

Episodic events are flexibly encoded in both integrated and separated neural representations.

Journal: Nature communications

Authors' code: Zenodo 17612987 (CC-BY-4.0)

Status: code verified

[8346] doi:10.1038/s41467-026-68632-9 [paper, data]

Hydrogel with cell-cell adhesion cues enhances neural regeneration.

Journal: Nature communications

Status: data only, 1 dataset cited

[8347] doi:10.1038/s41563-025-02463-9 [paper, repository]

Long-range chemical signalling in vivo is regulated by mechanical signals.

Journal: Nature materials

Authors' code: Zenodo 17701972 (CC-BY-4.0), Zenodo 17702192 (CC-BY-4.0), juliambecker/juliabeckerthesis (no license), alexwinkel/matlabfluidity (no license)

Status: code verified, 94 files readable, 8 matches

[8348] doi:10.1038/s41590-025-02411-4 [paper, data]

Unraveling CD8 lineage decisions reveals that functionally distinct CD8<sup>+</sup> T cells are selected by different MHC-I thymic peptides.

Journal: Nature immunology

Status: data only, 1 dataset cited

[8349] doi:10.1093/braincomms/fcag009 [paper, repository]

Does white matter structure relate to hemispheric language lateralization? A systematic review.

Journal: Brain communications

Authors' code: andrulyte/systematic-review-figures (no license)

Status: code verified, 2 files readable, 3 matches

[8350] doi:10.1093/nc/niaf056 [paper]

Investigating the role of beta and gamma tACS in visual processing and conscious perception.

Journal: Neuroscience of consciousness

Status: code on request

[8351] doi:10.1093/nc/niaf065 [paper, data]

Contingency awareness shapes neural responses in fear conditioning.

Journal: Neuroscience of consciousness

Status: data only, 2 datasets cited

[8352] doi:10.1159/000549327 [paper, data]

Toward a Speech-Based Model of Premanifest Huntington's Disease Progression Using Deep Neural Networks.

Journal: Digital biomarkers

Status: data only, 1 dataset cited

[8353] doi:10.1159/000550490 [paper, data]

Long-Term Mortality and 10-Year Outcomes after Subthalamic Nucleus Deep Brain Stimulation in Parkinson's Disease.

Journal: Stereotactic and functional neurosurgery

Status: data only, 1 dataset cited

[8354] doi:10.1159/000550513 [paper, data]

Prediction of Retinopathy of Prematurity and Treatment in Very Low Birth Weight Infants Using Machine Learning on Nationwide Non-Imaging Clinical Data.

Journal: Neonatology

Status: data only, 1 dataset cited

[8355] doi:10.1159/000550579 [paper, data]

Tapia's Syndrome following Noninvasive Continuous Positive Airway Pressure Therapy: A Case Report.

Journal: Case reports in neurology

Status: data only, 1 dataset cited

[8356] doi:10.1186/s13195-025-01951-z [paper, repository]

Circulating inflammatory proteins predict dementia risk, and are linked to structural brain changes and modifiable risk factors.

Journal: Alzheimer's research & therapy

Authors' code: Wolfson-PNU-QMUL/inflammatory_proteins_dementia (no license)

Status: empty repository

[8357] doi:10.1186/s44477-025-00012-x [paper]

Differential downstream signaling in microglia lacking Alzheimer's-related TREM2 or its adaptor TYROBP/DAP12.

Journal: Molecular neurodegeneration advances

Status: data only

[8358] doi:10.1556/2006.2025.00103 [paper, repository]

Connectome-based predictive modelling of problematic gaming in youth from the ABCD study.

Journal: Journal of behavioral addictions

Authors' code: YaleMRRC/CPM (no license)

Status: code verified, 41 files readable, 3 matches

[8359] doi:10.3389/fnins.2025.1661523 [paper, data]

Neural mechanisms of cognitive conflict: processing COVID-19 vaccine misinformation.

Journal: Frontiers in neuroscience

Status: data only, 2 datasets cited

[8360] doi:10.3390/cells15020177 [paper, repository]

Cell-Based Computational Models of Organoids: A Systematic Review.

Journal: Cells

Authors' code: sysbio-curie/PhysiBoSS (no license)

Status: code verified, 261 files readable, 4 matches

[8361] doi:10.3390/cimb48010103 [paper, data]

Identification of Tumor- and Immunosuppression-Driven Glioblastoma Subtypes Characterized by Clinical Prognosis and Therapeutic Targets.

Journal: Current issues in molecular biology

Status: data only, 1 dataset cited

[8362] doi:10.3390/diagnostics16020317 [paper, repository]

AI-Based Brain Volumetry Without MPRAGE? Evaluation of Synthetic T1-MPRAGE from 2D T2/FLAIR.

Journal: Diagnostics (Basel, Switzerland)

Authors' code: BBillot/SynthSR (Apache-2.0)

Status: code verified, 35 files readable, 2 matches

[8363] doi:10.3390/e28010118 [paper, data]

Uncovering Neural Learning Dynamics Through Latent Mutual Information.

Journal: Entropy (Basel, Switzerland)

Status: data only, 1 dataset cited

[8364] doi:10.5498/wjp.v16.i1.113104 [paper]

Risk factors and early identification markers for post-ischemic stroke anxiety and depression.

Journal: World journal of psychiatry

Status: code on request

[8365] doi:10.64898/2026.01.17.700088 [paper, data]

Decoding the “bouba-kiki” effect in early visual cortex

Journal: bioRxiv (preprint)

Status: data only, 1 dataset cited

Sunday, 18 January 2026 (7 papers)

[8366] doi:10.1002/advs.202515671 [paper, data]

The Microbiota Shapes Central Nervous System Myelination in Early Life.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Status: data only, 1 dataset cited

[8367] doi:10.1016/j.nicl.2026.103950 [paper, repository]

Structural brain alterations in anorexia nervosa: a global brain volume and anatomical likelihood estimation (ALE) meta-analysis combined with a functional decoding approach.

Journal: NeuroImage. Clinical

Authors' code: inm7/jubrain-anatomy-toolbox (no license), Zenodo 6884932 (other-nc)

Status: code verified, 38 files readable, 1 match

[8368] doi:10.1080/21645515.2026.2614814 [paper, data]

Real-world effectiveness of EV-A71 vaccine against encephalitis in children.

Journal: Human vaccines & immunotherapeutics

Status: data only, 1 dataset cited

[8369] doi:10.1093/noajnl/vdag006 [paper, data]

DNA methylation-based deconvolution study of glioblastoma heterogeneity and identification of cell compositions associated with patient survival.

Journal: Neuro-oncology advances

Status: data only, 1 dataset cited

[8370] doi:10.1111/bmsp.70026 [paper, repository]

Enhancing generalizability theory with mixed-effects models for heteroscedasticity in psychological measurement: A theoretical introduction with an application from EEG data.

Journal: The British journal of mathematical and statistical psychology

Authors' code: OSF 5rn6u (no license)

Status: code verified, 8 files readable

[8371] doi:10.3390/ijms27020963 [paper, data]

EZHIP in Pediatric Brain Tumors: From Epigenetic Mimicry to Therapeutic Vulnerabilities.

Journal: International journal of molecular sciences

Status: data only, 1 dataset cited

[8372] doi:10.64898/2026.01.16.699885 [paper, repository]

Hippocampal neuronal and astrocytic responses to noradrenaline and natural arousal

Journal: bioRxiv (preprint)

Authors' code: PTRRupprecht/Drawing-ROIs-without-GUI (MIT), PTRRupprecht/Duss-et-al-2026 (GPL-3.0)

Status: code verified, 24 files readable

Saturday, 17 January 2026 (8 papers)

[8373] doi:10.1016/j.bpj.2026.01.026 [paper]

DNA-PAINT resolves E-cadherin-independent cross-junctional F-actin organization in Drosophila embryonic tissue.

Journal: Biophysical journal

Status: code on request

[8374] doi:10.1016/j.redox.2026.104029 [paper, data]

Upregulated GBP2 exacerbates Parkinson's disease pathogenesis by impairing NIX-dependent mitophagy.

Journal: Redox biology

Status: data only, 1 dataset cited

[8375] doi:10.1038/s41467-026-68350-2 [paper, repository]

Molecular heterogeneity of the non-human primate cochlea.

Journal: Nature communications

Authors' code: Shinnyee/Cell-atlas-of-non-human-primate-cochlea (no license)

Status: code verified, 2 files readable, 9 matches

[8376] doi:10.1038/s41467-026-68404-5 [paper, repository]

Aperiodic 1/f noise drives ripple activity in humans.

Journal: Nature communications

Authors' code: helfrichlab/vanSchalkwijk_1-f-ripples_NatCommun (MIT), Zenodo 17978351 (MIT)

Status: code verified, 48 files readable, 11 matches

[8377] doi:10.1038/s41598-026-35239-5 [paper]

Exploration of potential biomarkers in salivary duct carcinoma based on bioinformatics analysis.

Journal: Scientific reports

Status: data only

[8378] doi:10.1038/s41746-026-02347-5 [paper, repository]

Masked autoencoding, generalizable pretraining, and integrated experts for enhanced glioma segmentation.

Journal: NPJ digital medicine

Authors' code: anonymous.4open.science/r/magpie-154c (no license)

Status: code found, still to be checked

[8379] doi:10.1038/s42003-026-09530-0 [paper, data]

Differentially expressed miRNAs in the temporal cortex of Alzheimer's disease patients and their association to tau pathology.

Journal: Communications biology

Status: data only, 1 dataset cited

[8380] doi:10.3390/biology15020174 [paper, repository]

Metabolic Landscape and Cell-Type-Specific Transcriptional Signatures Associated with Dopamine Receptor Activation in the Honeybee Brain.

Journal: Biology

Authors' code: figshare 30777629 (CC-BY-4.0)

Status: code verified, 2 files readable, 7 matches

Friday, 16 January 2026 (59 papers)

[8381] doi:10.1016/j.brs.2026.103032 [paper]

Non-invasive modulation of brain activity and behavior by transcranial radio frequency stimulation.

Journal: Brain stimulation

Status: code on request

[8382] doi:10.1016/j.celrep.2025.116841 [paper]

Inducible deletion of DGAT1 and 2 from microglia exacerbates neurodegeneration and endolysosomal lipid accumulation in male PS19 mice.

Journal: Cell reports

Status: code on request

[8383] doi:10.1016/j.celrep.2025.116852 [paper, data]

MyD88 signaling in myeloid cells induces gastrointestinal tract injury and systemic inflammation after West Nile virus infection.

Journal: Cell reports

Status: code on request, 3 datasets cited

[8384] doi:10.1016/j.isci.2026.114717 [paper]

The succinate prodrug NV354 prevents brain lesions and late-stage motor dysfunction in mitochondrial complex I deficiency.

Journal: iScience

Status: code on request

[8385] doi:10.1016/j.isci.2026.114720 [paper]

Activation of SNr GABA neurons drives liver-brain-eye axis dysfunction in hepatic encephalopathy.

Journal: iScience

Status: code on request

[8386] doi:10.1016/j.media.2026.103941 [paper, repository]

Advances in automated fetal brain MRI segmentation and biometry: Insights from the FeTA 2024 challenge.

Journal: Medical image analysis

Authors' code: smilell/topology-evaluation (no license), fetachallenge/fetachallengesubmission (GPL-3.0), fetachallenge.github.io/pages (no license), hub.docker.com/r/fetachallenge22 (no license), hub.docker.com/u/fetachallenge2024 (no license), Zenodo 15696638 (CC-BY-4.0)

Status: code verified, 7 files readable, 4 matches

[8387] doi:10.1016/j.nicl.2026.103949 [paper, data]

Spatiotemporal brain dynamics in 8-to-9-year-old children: A comparative study between preterm and term schoolchildren.

Journal: NeuroImage. Clinical

Status: data only, 1 dataset cited

[8388] doi:10.1016/j.xgen.2025.101126 [paper, repository]

Variant-resolved prediction of context-specific isoform variation with a graph-based attention model.

Journal: Cell genomics

Authors' code: FunctionLab/otari (no license), FunctionLab/otari-manuscript (no license), Zenodo 16432270 (CC-BY-4.0), Zenodo 16433545 (CC-BY-4.0), FunctionLab/sei-framework (BSD-3-Clause), gagneurlab/MMSplice_MTSplice (MIT), Illumina/SpliceAI (other), google-deepmind/alphagenome (Apache-2.0), broadinstitute/gatk (Apache-2.0)

Status: code verified, 2,111 files readable, 25 matches

[8389] doi:10.1038/s41467-026-68313-7 [paper, repository]

Glutamatergic projection neurons in the basal forebrain underlie learned olfactory associational valence assignments.

Journal: Nature communications

Authors' code: julie200388/vGlut2BF_odor_learning (no license)

Status: code verified, 48 files readable, 6 matches

[8390] doi:10.1038/s41531-025-01246-y [paper, repository]

Imaging spatial transcriptomics reveals molecular patterns underlying accumulation of p-Ser129 α-synuclein in a transgenic mouse model.

Journal: NPJ Parkinson's disease

Authors' code: neurogenetics/Xenium_Line61_spatial (no license)

Status: code verified, 31 files readable, 13 matches

[8391] doi:10.1038/s41591-026-04211-1 [paper, repository]

Single-cell atlas of the developing Down syndrome brain cortex.

Journal: Nature medicine

Authors' code: lattkem1/Nuc_fluor_Fiji_R_025 (GPL-3.0), lattkem1/Down_Syndrome_Multiome (no license)

Status: code verified, 104 files readable, 40 matches

[8392] doi:10.1038/s41597-026-06601-z [paper, repository]

Brain/MINDS Marmoset Brain Atlas 2.0: Population Cortical Parcellation With Multi-Modal Templates.

Journal: Scientific data

Authors' code: dataportal.brainminds.jp (no license)

Status: code verified

[8393] doi:10.1038/s41598-025-30078-2 [paper, data]

Hypoxia tolerance of intertidal triplefin fish is associated with low critical oxygen tension and high phosphorylating capacity in brain mitochondria.

Journal: Scientific reports

Status: data only, 1 dataset cited

[8394] doi:10.1038/s41598-025-32274-6 [paper, repository]

An attention-augmented multimodal classification of alzheimer's disease and parkinson's disease vs healthy controls using MRI, EEG, and SNP data.

Journal: Scientific reports

Authors' code: skbsangeetha/-Attention-Augmented-Multimodal-Classification (no license)

Status: code verified, 15 files readable, 1 match

[8395] doi:10.1038/s41598-025-34410-8 [paper, data]

Children's state anxiety before MRI scanning and resting state functional connectivity in large scale brain networks.

Journal: Scientific reports

Status: data only, 1 dataset cited

[8396] doi:10.1038/s41598-025-34598-9 [paper, data]

Neuroanatomical correlates of communication apprehension in young adults using voxel-based morphometry.

Journal: Scientific reports

Status: data only, 1 dataset cited

[8397] doi:10.1038/s41598-026-36122-z [paper, repository]

Temporal order of activations and interactions during arithmetic calculations measured by intracranial electrophysiological recordings in the human brain.

Journal: Scientific reports

Authors' code: JiriHammer/SEEG_dataAnalysis (GPL-3.0)

Status: code verified, 247 files readable, 8 matches

[8398] doi:10.1038/s41598-026-36298-4 [paper, data]

Visual perception based deep learning transformers for classifying paintings and photographs through feature extraction.

Journal: Scientific reports

Status: data only, 1 dataset cited

[8399] doi:10.1038/s42003-026-09536-8 [paper, repository]

How do infant brains fold? Sulcal deepening is linked to development of sulcal span, thickness, curvature, and microstructure.

Journal: Communications biology

Authors' code: Zenodo 17971447 (GPL-3.0), VPNL/infants_sulcalmorphology (GPL-3.0)

Status: code verified, 30 files readable, 8 matches

[8400] doi:10.1038/s42003-026-09549-3 [paper, repository]

Deciphering multiway multiscale brain network connectivity from birth to 6 months.

Journal: Communications biology

Authors' code: trendscenter/gift (no license)

Status: code verified, 1,047 files readable, 6 matches

[8401] doi:10.1038/s44385-025-00055-5 [paper, repository]

Magnetic NeuroRing: a portable adaptive brain-computer interface for real-time transcranial magnetic stimulation in post-stroke motor rehabilitation.

Journal: npj biomedical innovations

Authors' code: ttangyr/MNR-EEG-ANALYSIS (no license)

Status: code verified, 8 files readable, 4 matches

[8402] doi:10.1073/pnas.2503388123 [paper, data]

Distinct contributions of hippocampal pathways in learning regularities and exceptions revealed by functional footprints.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Status: data only, 1 dataset cited

[8403] doi:10.1080/15384101.2026.2614017 [paper, data]

A fasting-mimicking environment enhances procaspase-activating compound 1 in 2D and 3D glioma cell models.

Journal: Cell cycle (Georgetown, Tex.)

Status: data only, 1 dataset cited

[8404] doi:10.1093/braincomms/fcag013 [paper, repository]

The relationship between corticospinal excitability and behavioural measures of movement imagery ability.

Journal: Brain communications

Authors' code: OSF yujvt (no license)

Status: code verified

[8405] doi:10.1093/noajnl/vdag003 [paper, repository]

Single-cell RNA sequencing suggests different progenitor lineages between <i>IDH</i> mutant and <i>IDH</i>wt glioma.

Journal: Neuro-oncology advances

Authors' code: iyadalnahhas/scRNA_astrocytoma (no license)

Status: code verified, 2 files readable, 9 matches

[8406] doi:10.1093/noajnl/vdag004 [paper]

Discovery of genetic susceptibility variants in pediatric and adult ependymoma.

Journal: Neuro-oncology advances

Status: code on request

[8407] doi:10.1093/nsr/nwag004 [paper, repository]

Organization of mouse prefrontal cortex subnetwork revealed by spatial single-cell multi-omic analysis of SPIDER-Seq.

Journal: National science review

Authors' code: ZhengTiger/SPIDER-Seq (MIT)

Status: code verified, 21 files readable, 10 matches

[8408] doi:10.1113/ep093112 [paper, repository]

Physiological cerebrospinal fluid interactions between brain and eye structures are altered after long-duration spaceflight.

Journal: Experimental physiology

Authors' code: Eulenburg-LMU/MReye-Seg (MIT)

Status: code verified, 10 files readable, 2 matches

[8409] doi:10.1126/sciadv.adw7667 [paper, data]

A causal coding variant regulating alternative splicing of <i>DOC2A</i> at 16p.11.2 GWAS locus influences susceptibility to schizophrenia.

Journal: Science advances

Status: data only, 1 dataset cited

[8410] doi:10.1159/000550480 [paper, data]

Imaging Markers Predict the Short-Term and Long-Term Stroke Recurrence in Symptomatic Intracranial Atherosclerotic Disease.

Journal: Cerebrovascular diseases extra

Status: data only, 1 dataset cited

[8411] doi:10.1159/000550495 [paper, data]

Coenzyme Q10 Supplementation in a Child with Biallelic <i>COQ8A</i> Variants: A Case Report.

Journal: Case reports in neurology

Status: data only, 1 dataset cited

[8412] doi:10.1162/imag.a.1088 [paper, repository]

fMRI signals of pattern separation in the neocortex and hippocampus to non-meaningful objects and their spatial location.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: zs-nemecz/miniTRK (no license)

Status: code verified, 132 files readable, 6 matches

[8413] doi:10.1162/imag.a.1090 [paper, repository]

Level up the brain! Novel PCA method reveals key neuroplastic refinements in action video gamers.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: OSF 9ank7 (no license)

Status: code verified, 18 files readable, 11 matches

[8414] doi:10.1162/imag.a.1103 [paper, repository]

Oscillatory multi-timescale mechanisms underlying audiovisual sequence prediction.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: neuro-science/neuro_data_analysis (no license)

Status: code verified, 967 files readable, 7 matches

[8415] doi:10.1172/jci190754 [paper, data]

Protectin DX resolves fracture-induced postoperative pain in mice via neuronal signaling and GPR37-activated macrophage efferocytosis.

Journal: The Journal of clinical investigation

Status: data only, 1 dataset cited

[8416] doi:10.1177/15500594251399706 [paper, data]

Mindfulness Training in Youth With ADHD + Comorbid Learning Disability Maintains Medial Frontal Cortex Function During Response Inhibition.

Journal: Clinical EEG and neuroscience

Status: data only, 1 dataset cited

[8417] doi:10.1186/s12876-026-04615-w [paper]

Shared and distinct spontaneous brain activity pattern in crohn's disease and ulcerative colitis: evidence from cortical surface‑based analysis.

Journal: BMC gastroenterology

Status: code on request

[8418] doi:10.1186/s12940-025-01254-8 [paper, data]

Associations of arsenic exposure and folate in maternal leukocyte DNA methylation: a case-control study of mothers with spina-bifida affected children.

Journal: Environmental health : a global access science source

Status: data only, 2 datasets cited

[8419] doi:10.1186/s12974-025-03689-9 [paper]

Targeting the intestinal TLR4-GABA<sub>A</sub> axis to promote stroke recovery.

Journal: Journal of neuroinflammation

Status: data only

[8420] doi:10.1186/s12987-025-00754-6 [paper, data]

Notch signaling activation reduces vesicular endocytosis in human pluripotent stem cell-derived CNS-like endothelial cells.

Journal: Fluids and barriers of the CNS

Status: data only, 1 dataset cited

[8421] doi:10.1186/s12987-026-00758-w [paper]

Impact of infusion conditions and anesthesia on CSF tracer dynamics in mouse brain.

Journal: Fluids and barriers of the CNS

Status: code on request

[8422] doi:10.1364/boe.579339 [paper]

Dynamic Windkessel autoregulation for optical hemodynamic imaging: quantifying microcirculation, oxygen diffusion, and vascular autoregulation from low-frequency hemodynamic oscillations.

Journal: Biomedical optics express

Status: code on request

[8423] doi:10.1371/journal.pbio.3003613 [paper, repository]

Neural traces of composite tasks in complex task representation in the human brain reflects learning performance.

Journal: PLoS biology

Authors' code: OSF mzf4a (no license)

Status: code verified, 10 files readable

[8424] doi:10.1371/journal.pcbi.1013844 [paper, repository]

Conditions for replay of neuronal assemblies.

Journal: PLoS computational biology

Authors' code: gaspar-c/replay-conditions (no license)

Status: code verified, 35 files readable, 12 matches

[8425] doi:10.1371/journal.pone.0337800 [paper, repository]

Alzheimer's disease prediction via an explainable CNN using genetic algorithm and SHAP values.

Journal: PloS one

Authors' code: MohammadZp/GASHAP (MIT)

Status: code verified, 3 files readable, 1 match

[8426] doi:10.1371/journal.pone.0340202 [paper, data]

Conjugation of a Cryptococcus neoformans-derived metalloprotease to antifungal-loaded PLGA nanoparticles treats neural cryptococcosis in an in vitro model.

Journal: PloS one

Status: data only, 1 dataset cited

[8427] doi:10.26508/lsa.202503571 [paper, data]

Reticulon-1 synthesis controls outgrowth and microtubule dynamics in injured cortical axons.

Journal: Life science alliance

Status: data only, 3 datasets cited

[8428] doi:10.3389/fbioe.2025.1664302 [paper, data]

Engineering human bone marrow-derived mesenchymal stromal cell aggregates for enhanced extracellular vesicle secretion in a vertical-wheel bioreactor.

Journal: Frontiers in bioengineering and biotechnology

Status: data only, 1 dataset cited

[8429] doi:10.3389/fnagi.2026.1727812 [paper, repository]

Combining plasma biomarkers, clinical parameters, and neuroimaging features for differential diagnosis of Parkinson's disease and atypical parkinsonian syndromes: a multidimensional modeling approach.

Journal: Frontiers in aging neuroscience

Authors' code: cran/glmnet (no license), cran/randomForest (GPL-2.0), xrobin/pROC (GPL-3.0)

Status: code verified, 252 files readable

[8430] doi:10.3389/fnetp.2025.1681597 [paper, repository]

Empirical evidence for structural balance theory in functional brain networks.

Journal: Frontiers in network physiology

Authors' code: majidsaberi/StructuralBalance (no license)

Status: dead link

[8431] doi:10.3389/fnins.2025.1698395 [paper, data]

Cerebral responses to famous face recognition as a potential functional biomarker of mild cognitive impairment.

Journal: Frontiers in neuroscience

Status: data only, 1 dataset cited

[8432] doi:10.3389/fnut.2025.1699142 [paper, repository]

Modified Sanjia Powder ameliorates cognitive impairment and exerts neuroprotective effects in 5 × FAD mice: insights from quantitative proteomics.

Journal: Frontiers in nutrition

Authors' code: vdemichev/DiaNN (other)

Status: code verified, 441 files readable

[8433] doi:10.3390/biomimetics11010075 [paper, repository]

Hybrid Spike-Encoded Spiking Neural Networks for Real-Time EEG Seizure Detection: A Comparative Benchmark.

Journal: Biomimetics (Basel, Switzerland)

Authors' code: ali-mehrabi/EEG_Seizure_detection (BSD-3-Clause)

Status: code verified, 5 files readable, 13 matches

[8434] doi:10.3390/brainsci16010094 [paper]

Detecting Dementia Using Lexical Analysis: Terry Pratchett's Discworld Tells a More Personal Story.

Journal: Brain sciences

Status: code on request

[8435] doi:10.3390/brainsci16010095 [paper, data]

SleepMFormer: An Efficient Attention Framework with Contrastive Learning for Single-Channel EEG Sleep Staging.

Journal: Brain sciences

Status: data only, 2 datasets cited

[8436] doi:10.64898/2026.01.15.26343790 [paper, repository]

Cerebrospinal fluid haemoglobin as a monitoring biomarker for secondary brain injury after aneurysmal subarachnoid haemorrhage: prospective international multicentre validation study (HeMoVal)

Journal: medRxiv (preprint)

Authors' code: Zenodo 6620697 (CC-BY-4.0)

Status: code verified, 5 files readable, 4 matches

[8437] doi:10.64898/2026.01.15.26344193 [paper, repository]

Psychedelics distinctly alter brain entropy and complexity compared to psychostimulants

Journal: medRxiv (preprint)

Authors' code: anders-s-olsen/CopBET (no license), kristian1801/entropsi_planned_analysis_february_2025 (no license), kristian1801/Entropy_final_analysis (no license), cran.r-project.org/web/packages (no license)

Status: code verified, 459 files readable, 11 matches

[8438] doi:10.7554/elife.106665 [paper, data]

Glial <i>betaPix</i> is essential for blood vessel development in the zebrafish brain.

Journal: eLife

Status: data only, 1 dataset cited

[8439] doi:10.7554/elife.106827 [paper, repository]

Biologically informed cortical models predict optogenetic perturbations.

Journal: eLife

Authors' code: Sourmpis/BiologicallyInformed (MIT)

Status: code verified, 37 files readable, 8 matches

Thursday, 15 January 2026 (28 papers)

[8440] doi:10.1007/s12031-025-02469-7 [paper, repository]

Utilisation of Machine Learning Approaches Improves RNA-Seq Transcriptome Analyses in Alzheimer's Disease Brain.

Journal: Journal of molecular neuroscience : MN

Authors' code: Kuanhao-Chao/splam (MIT), ccb.jhu.edu/software/stringtie (no license), Xinglab/rmats-turbo (BSD-2-Clause)

Status: code verified, 307 files readable, 2 matches

[8441] doi:10.1007/s12035-025-05582-1 [paper, repository]

Beyond Single Variants: A Pathway-Based Approach to Explore the Genetic Basis of Memory.

Journal: Molecular neurobiology

Authors' code: macsbio/HCP_Memory_GWAS (MIT)

Status: code verified, 10 files readable, 1 match

[8442] doi:10.1016/j.dib.2026.112478 [paper, data]

BraTioUS: A multicenter dataset of baseline intraoperative brain tumor ultrasound images.

Journal: Data in brief

Status: data only, 1 dataset cited

[8443] doi:10.1016/j.ijheh.2026.114745 [paper, repository]

Gestational PBDE concentrations and functional connectivity in adolescents: The HOME Study.

Journal: International journal of hygiene and environmental health

Authors' code: canlab/MediationToolbox (no license)

Status: code verified, 202 files readable

[8444] doi:10.1016/j.isci.2026.114700 [paper, repository]

Aberrant mRNA splicing and impaired hippocampal neurogenesis in <i>Grin2b</i> mutant mice.

Journal: iScience

Authors' code: app.terra.bio (no license), const-ae/glmGamPoi (other)

Status: code verified, 53 files readable, 1 match

[8445] doi:10.1016/j.isci.2026.114707 [paper, repository]

Impact of Tau overexpression on DNA replication dynamics in centromeres of human neural progenitor cells.

Journal: iScience

Authors' code: marbl/verkko (no license), lh3/minimap2 (MIT), zippav/Jellyfish-2 (GPL-3.0), marbl/Winnowmap (MIT), mrvollger/NucFreq (MIT), usadellab/Trimmomatic (GPL-3.0)

Status: code verified, 891 files readable, 3 matches

[8446] doi:10.1016/j.isci.2026.114716 [paper, data]

CircRNA Cdyl promotes the proliferation and differentiation of neural stem cells via regulating miR-544-3p/Nr3c1 axis.

Journal: iScience

Status: code on request, 1 dataset cited

[8447] doi:10.1016/j.jgeb.2026.100658 [paper, data]

ResSGA-Net: A deep learning approach for enhanced brain tumor detection and accurate classification in healthcare imaging systems.

Journal: Journal, genetic engineering & biotechnology

Status: data only, 2 datasets cited

[8448] doi:10.1016/j.mtbio.2026.102805 [paper]

CS-NO releasing hydrogel protects against neuron apoptosis and inflammation through suppressing the HIF-1α and MAPK pathway in stroke.

Journal: Materials today. Bio

Status: code on request

[8449] doi:10.1021/acsomega.5c07870 [paper, data]

Elucidation of Dual Antimicrobial and Anti-Parkinsonian Activities through an In-Silico Approach of <i>Ipomoea mauritiana</i> Jacq. in the Context of the Gut-Brain Axis.

Journal: ACS omega

Status: data only, 3 datasets cited

[8450] doi:10.1038/s41380-025-03432-z [paper]

Psychotropic medications and their interactions with subcortical brain volume in bipolar disorder: An ENIGMA mega-analysis.

Journal: Molecular psychiatry

Status: code on request

[8451] doi:10.1038/s41398-025-03786-6 [paper, repository]

Perceived control as a resilience factor: associations with neural, physiological and affective stress responses and mental health.

Journal: Translational psychiatry

Authors' code: OSF g6au5 (no license)

Status: code verified, 3 files readable, 10 matches

[8452] doi:10.1038/s41531-025-01233-3 [paper]

Low-frequency activity in the subthalamic nucleus informs about the acute neuropsychiatric state in Parkinson's disease.

Journal: NPJ Parkinson's disease

Status: code on request

[8453] doi:10.1038/s41590-025-02406-1 [paper, data]

A GDF-15-GFRAL axis controls autoimmune T cell responses during neuroinflammation.

Journal: Nature immunology

Status: code on request, 1 dataset cited

[8454] doi:10.1038/s41593-025-02196-7 [paper, repository]

Investigating the methodological foundation of lesion network mapping.

Journal: Nature neuroscience

Authors' code: dutchconnectomelab/lesionnetworkmapping (GPL)

Status: code verified, 44 files readable, 4 matches

[8455] doi:10.1038/s41597-026-06580-1 [paper, repository]

A Mouse Cortex Video Segmentation Dataset for Intrinsic Optical Signal Tracking and Neural Activity Analysis.

Journal: Scientific data

Authors' code: ZhangWang-hub/MouseCortex-IOS (no license), yatengLG/ISAT_with_segment_anything (Apache-2.0)

Status: code verified, 525 files readable, 2 matches

[8456] doi:10.1038/s41598-025-33981-w [paper, repository]

Mapping brain growth and sex differences across prenatal to postnatal development.

Journal: Scientific reports

Authors' code: BioMedIA/dhcp-structural-pipeline (Apache-2.0), mirtk/drawem (Apache-2.0)

Status: code verified, 1,315 files readable, 3 matches

[8457] doi:10.1038/s43856-025-01281-z [paper, repository]

Digital twins support cross-modal and cross-centric classification of mild cognitive impairment.

Journal: Communications medicine

Authors' code: LoreAma/Code_AD_simulations (GPL-2.0)

Status: code verified, 5 files readable, 3 matches

[8458] doi:10.1073/pnas.2521872123 [paper, repository]

Microvascular architecture and physiological fluctuations constrain the control of cerebral microcirculation.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: xiangjiph/NetworkFlowTracker (BSD-3-Clause)

Status: code verified, 35 files readable, 2 matches

[8459] doi:10.1159/000549865 [paper, data]

Transient Loss of Consciousness due to Increased Intracranial Pressure in a Patient with Lumbar Pseudomeningocele: A Case Report and Literature Review.

Journal: Case reports in neurology

Status: data only, 1 dataset cited

[8460] doi:10.1159/000550515 [paper, data]

Intracranial Giant Cell Arteritis Progressing despite Treatment with High Doses of Corticosteroids: Case Report.

Journal: Case reports in ophthalmology

Status: data only, 1 dataset cited

[8461] doi:10.1186/s12883-026-04625-x [paper, data]

A network-based EEG source imaging framework for noninvasive localization of epileptogenic zones in MRI-negative focal drug-resistant epilepsy.

Journal: BMC neurology

Status: data only, 1 dataset cited

[8462] doi:10.1186/s12916-026-04631-3 [paper]

Accelerated brain aging in amyotrophic lateral sclerosis and its prognostic associations: a cohort study.

Journal: BMC medicine

Status: code on request

[8463] doi:10.1186/s40478-026-02224-y [paper, repository]

Spatiotemporal transcriptomic mapping reveals region-specific glial activation and astrocyte shifts in epileptogenesis beyond the hippocampus.

Journal: Acta neuropathologica communications

Authors' code: INSERM-U1141-Neurodiderot/spatial-transcriptome-epilepsy (GPL-3.0)

Status: code verified, 23 files readable, 9 matches

[8464] doi:10.3389/fnagi.2025.1704130 [paper, repository]

Polarity-dependent modulation of sleep oscillations and cortical excitability in aging.

Journal: Frontiers in aging neuroscience

Authors' code: jbkordass/memory-sfb2-2025 (no license)

Status: code verified, 29 files readable, 8 matches

[8465] doi:10.3390/s26020582 [paper, data]

SAWGAN-BDCMA: A Self-Attention Wasserstein GAN and Bidirectional Cross-Modal Attention Framework for Multimodal Emotion Recognition.

Journal: Sensors (Basel, Switzerland)

Status: data only, 1 dataset cited

[8466] doi:10.34133/research.1072 [paper, repository]

The Optically Guided and Pre-assembled Implantation Cranial Window Reveals Cortical Spatial Representations during Navigation.

Journal: Research (Washington, D.C.)

Authors' code: cebra.ai/docs/demo_notebooks (no license), lemon123457/OGPI (no license)

Status: code verified, 1 file readable

[8467] doi:10.64898/2026.01.15.699631 [paper, repository]

MorphoLearn: A morphology-driven workflow to decipher 3D electron microscopy segmentation in diatoms

Journal: bioRxiv (preprint)

Authors' code: Zenodo 17630945 (MIT), cuwizeye/AI-assisted-learning (MIT)

Status: code verified, 108 files readable, 16 matches

Wednesday, 14 January 2026 (34 papers)

[8468] doi:10.1002/advs.202514044 [paper, repository]

Light Therapy Alleviates Addiction-Related Symptoms and Reshapes Habenula and Midbrain Pathways.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Authors' code: canlab/neuroimaging_pattern_masks (GPL-3.0)

Status: code verified, 344 files readable, 1 match

[8469] doi:10.1002/epi.70069 [paper]

Quantifying the impact of a computer-aided diagnostic score on the clinical diagnosis of functional seizures.

Journal: Epilepsia

Status: code on request

[8470] doi:10.1016/j.celrep.2025.116847 [paper, repository]

From comparative connectomics to large-scale working memory modeling in macaque and marmoset.

Journal: Cell reports

Authors' code: Zenodo 15612783 (CC-BY-4.0)

Status: code verified, 8 files readable, 2 matches

[8471] doi:10.1016/j.celrep.2025.116848 [paper, repository]

Human organoid tumor transplantation identifies functional glioblastoma-microenvironment communication mediated by PTPRZ1.

Journal: Cell reports

Authors' code: morphonets/SNT (GPL-3.0), phipsonlab/speckle (GPL-3.0), hott.cells.ucsc.edu (no license)

Status: code verified, 547 files readable

[8472] doi:10.1016/j.isci.2026.114689 [paper, repository]

Odor identity decoding by mitral/tufted cells in the olfactory bulb from large-scale pooled datasets.

Journal: iScience

Authors' code: lishan911nju/In-vivo-electrophysiological-data-analysis (no license)

Status: code verified, 32 files readable, 2 matches

[8473] doi:10.1016/j.isci.2026.114692 [paper, repository]

Transcriptomics and functional genomics implicate WNT3 in hemispheric lateralization of speech production.

Journal: iScience

Authors' code: zxwang-cloak/Human_brain_transcriptomics (MIT), DrCoffey/DeepSqueak (BSD-3-Clause)

Status: code verified, 102 files readable, 12 matches

[8474] doi:10.1016/j.isci.2026.114694 [paper, repository]

Dissociating neural circuits of social and prosocial reward in rat helping behavior.

Journal: iScience

Authors' code: bkntr/brainways (GPL-3.0)

Status: code verified, 171 files readable, 1 match

[8475] doi:10.1016/j.isci.2026.114696 [paper, data]

A gut feeling: Exploring the effects of probiotics on risk-taking behavior using TMS.

Journal: iScience

Status: data only, 1 dataset cited

[8476] doi:10.1016/j.isci.2026.114697 [paper, repository]

What is next? Predictable visual sequences are encoded with anticipatory biases and reduced neural responses.

Journal: iScience

Authors' code: OSF s57fg (no license)

Status: code verified, 6 files readable, 2 matches

[8477] doi:10.1017/s0033291725102997 [paper]

Subjective estimation of cognitive function in mild cognitive impairment: relationship with neurodegenerative and non-degenerative factors.

Journal: Psychological medicine

Status: code on request

[8478] doi:10.1038/s41467-026-68428-x [paper, repository]

Dynamic allele usage of X-linked genes ameliorates neurodevelopmental disease phenotypes in brain organoids.

Journal: Nature communications

Authors' code: tecangenomics.github.io/nudup (no license)

Status: code verified

[8479] doi:10.1038/s41522-025-00902-8 [paper, data]

A novel synbiotic (SCM06) for anxiety and sensory hyperresponsiveness in children with autism spectrum disorder: an open-label pilot study.

Journal: NPJ biofilms and microbiomes

Status: data only, 1 dataset cited

[8480] doi:10.1038/s44271-025-00392-6 [paper, repository]

Theta-gamma phase amplitude coupling serves as a marker of social cognition and visual working memory deficits in individuals with elevated autistic traits.

Journal: Communications psychology

Authors' code: OSF pabfv (no license)

Status: code verified, 2 files readable, 5 matches

[8481] doi:10.1073/pnas.2503909123 [paper, repository]

Proton-selective conductance and gating of the lysosomal cation channel TMEM175.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: Zenodo 14719866 (CC-BY-4.0)

Status: code verified

[8482] doi:10.1073/pnas.2525172122 [paper, repository]

Negative feedback regulation of alcohol ingestion through the FGF21-PVH oxytocin-VTA dopamine system.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: sssmmm615-afk/Chronological-Photometry-Analysis-Pipeline (MIT), sssmmm615-afk/ChronoPhot-visualization-module (MIT)

Status: code verified, 6 files readable

[8483] doi:10.1093/braincomms/fcag008 [paper, repository]

Integrating data across oscillatory power bands predicts the seizure onset zone in focal epilepsies.

Journal: Brain communications

Authors' code: Zenodo 11440403 (CC-BY-4.0), Zenodo 11440404 (CC-BY-4.0)

Status: code verified

[8484] doi:10.1126/sciadv.adv7530 [paper, repository]

A transposase-derived gene required for human brain development.

Journal: Science advances

Authors' code: AllenInstitute/abc_atlas_access (BSD-2-Clause), kentsisresearchgroup/P5BrainReorg (no license)

Status: code verified, 34 files readable, 3 matches

[8485] doi:10.1136/bmjophth-2025-002225 [paper, repository]

Development of a cloud-based estimator for analysing the disc-fovea angle in fundus images using a stacking ensemble model.

Journal: BMJ open ophthalmology

Authors' code: Zenodo 14841947 (CC-BY-4.0)

Status: code verified

[8486] doi:10.1162/imag.a.1089 [paper, repository]

Effects of diffusion MRI spatial resolution on human brain short-range association fiber reconstruction and structural connectivity estimation.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: ksubramz/gradunwarp (MIT), nmr.mgh.harvard.edu/c2p (no license)

Status: code verified, 15 files readable

[8487] doi:10.1162/imag.a.1100 [paper]

Distinct neural signatures in a sensorimotor synchronization-continuation task.

Journal: Imaging neuroscience (Cambridge, Mass.)

Status: code on request

[8488] doi:10.1186/s12888-025-07473-0 [paper, data]

Neuroimmune dysregulation and comorbidity mechanisms of major depressive disorder and migraine.

Journal: BMC psychiatry

Status: data only, 1 dataset cited

[8489] doi:10.1186/s12911-025-03322-y [paper, repository]

Development and validation of random-forest based federated ensemble learning algorithms for delirium prediction using electronic medical records from eleven hospitals in Austria: a retrospective study.

Journal: BMC medical informatics and decision making

Authors' code: sai.veeranki/flrandomforest (no license)

Status: code verified, 6 files readable, 3 matches

[8490] doi:10.1186/s12967-025-07675-w [paper, repository]

Nrf2 overexpression reprograms neural stem cell fate: promoting neuronal differentiation and functional recovery post-ischemic stroke via suppression of the ROS/NF-κB axis.

Journal: Journal of translational medicine

Authors' code: supp:PMC12888667/12967_2025_7675_MOESM1_ESM.r (no license), supp:PMC12888667/12967_2025_7675_MOESM2_ESM.r (no license)

Status: code verified, 2 files readable, 3 matches

[8491] doi:10.1523/eneuro.0385-25.2025 [paper, data]

Neural Signatures of Engagement and Event Segmentation during Story Listening in Background Noise.

Journal: eNeuro

Status: data only, 1 dataset cited

[8492] doi:10.1523/jneurosci.0238-25.2025 [paper, repository]

Emotional and Social Dimension of Abstract Concepts Meet with Interoception in Right Anterior Insula.

Journal: The Journal of neuroscience : the official journal of the Society for Neuroscience

Authors' code: OSF cavsy (no license)

Status: code verified, 18 files readable, 3 matches

[8493] doi:10.1523/jneurosci.1133-25.2025 [paper, repository]

Orientation Maps in Mouse Superior Colliculus Explained by Population Model of Non-Orientation Selective Neurons.

Journal: The Journal of neuroscience : the official journal of the Society for Neuroscience

Authors' code: austinchkuo/mousesc-ori-model (CC0-1.0)

Status: code verified, 24 files readable, 11 matches

[8494] doi:10.1523/jneurosci.1639-24.2025 [paper]

Effects of Novelty and Temporal Distance on Postexperience Spike Patterns of Hippocampal Place Cells Encoding Multiple Environments.

Journal: The Journal of neuroscience : the official journal of the Society for Neuroscience

Status: code on request

[8495] doi:10.21037/qims-24-2442 [paper, repository]

Dynamic network reconfiguration in hepatitis B cirrhosis secondary to mild hepatic encephalopathy: a multilayer network analysis.

Journal: Quantitative imaging in medicine and surgery

Authors' code: GenLouvain/GenLouvain (BSD-2-Clause)

Status: code verified, 46 files readable, 2 matches

[8496] doi:10.3389/fnagi.2025.1694514 [paper, data]

The differential expression profiles of miRNA in serum-derived exosomes and its potential role in age-related hearing loss.

Journal: Frontiers in aging neuroscience

Status: data only, 1 dataset cited

[8497] doi:10.3389/fnins.2025.1702912 [paper, data]

Electroacupuncture exerts neuroprotective effects and alters gut microbiota in a MPTP-induced mouse model of Parkinson's disease.

Journal: Frontiers in neuroscience

Status: data only, 1 dataset cited

[8498] doi:10.3390/neurolint18010017 [paper, data]

Modeling Late-Onset Sporadic Alzheimer's Disease Using Patient-Derived Cells: A Review.

Journal: Neurology international

Status: data only, 1 dataset cited

[8499] doi:10.34133/research.0992 [paper, repository]

Automated Learning of a Dense Manifold of Electronic States and Electronic Energy Transfer and Reactions in Singlet O Collisions with N<sub>2</sub>.

Journal: Research (Washington, D.C.)

Authors' code: shuyinan/chempotpy (Apache-2.0)

Status: code verified, 194 files readable, 1 match

[8500] doi:10.7554/elife.105575 [paper, data]

Afadin sorts different retinal neuron types into accurate cellular layers.

Journal: eLife

Status: data only, 1 dataset cited

[8501] doi:10.7554/elife.99931 [paper, repository]

A unifying account of replay as context-driven memory reactivation.

Journal: eLife

Authors' code: schapirolab/CMR-replay (no license)

Status: code verified, 1 file readable, 1 match

Tuesday, 13 January 2026 (43 papers, 11 on this page)

[8502] doi:10.1007/s00429-025-03069-2 [paper, repository]

Inter-individual variability of neurotransmitter receptor and transporter density in the human brain.

Journal: Brain structure & function

Authors' code: netneurolab/hansen_receptorvar (no license)

Status: code verified, 2 files readable

[8503] doi:10.1007/s11060-025-05238-z [paper]

Early distant progression in adult Histone-3 K27-altered diffuse midline gliomas.

Journal: Journal of neuro-oncology

Status: code on request

[8504] doi:10.1007/s12021-025-09755-0 [paper]

Towards Multi-Brain Decoding in Autism: A Self-Supervised Learning Approach.

Journal: Neuroinformatics

Status: code on request

[8505] doi:10.1016/j.celrep.2025.116832 [paper, repository]

Surround motion modulates the encoding properties of primate retinal ganglion cells.

Journal: Cell reports

Authors' code: mikemanookin/SurroundMotionPaper (MIT)

Status: code verified, 4 files readable, 1 match

[8506] doi:10.1016/j.neuroimage.2026.121718 [paper, repository]

Frontotemporal bursting supports human working memory.

Journal: NeuroImage

Authors' code: V-Marco/FT-bursting-WM (Apache-2.0)

Status: code verified, 8 files readable, 3 matches

[8507] doi:10.1016/j.omta.2026.201669 [paper, data]

Capsid-engineered AAV vector overcomes a key intracellular barrier and efficiently transduces spiral ganglion neurons in adult mice.

Journal: Molecular therapy. Advances

Status: data only, 1 dataset cited

[8508] doi:10.1017/s0033291725103140 [paper, repository]

Controllability of morphometric network colocalize with underlying neurobiology in major depression.

Journal: Psychological medicine

Authors' code: frantisekvasa/rotate_parcellation (MIT)

Status: code verified, 7 files readable

[8509] doi:10.1038/s41380-025-03376-4 [paper, repository]

Structural brain differences associated with panic disorder: an ENIGMA-Anxiety Working Group mega-analysis of 4924 individuals worldwide.

Journal: Molecular psychiatry

Authors' code: WillemB2104/ENIGMA-PD (CC-BY-NC-SA-4.0)

Status: code verified, 5 files readable, 2 matches

[8510] doi:10.1038/s41467-025-66729-1 [paper, repository]

Affiliative behaviours regulate allostasis development and shape biobehavioural trajectories in horses.

Journal: Nature communications

Authors' code: Zenodo 13969827 (CC-BY-4.0), CoBrALab/optimized_antsMultivariateTemplateConstruction (other), DavidBarriere/Equisobrain (GPL-3.0)

Status: code verified, 31 files readable, 10 matches

[8511] doi:10.1038/s41467-025-68056-x [paper, repository]

Identification of a thermogenic target in the dorsal raphe nucleus for weight management in mice.

Journal: Nature communications

Authors' code: RockefellerUniversity/SchneebergerPane_2024 (no license), ChristophKirst (no license)

Status: code verified, 2 files readable, 2 matches

[8512] doi:10.1038/s41467-025-68151-z [paper]

Neural phase microscopy with metasurface optics for real-time and nanoscale quantitative phase imaging.

Journal: Nature communications

Status: code on request

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