Functional divergence of Capicua isoforms explains differential tissue vulnerability in neurological disease.
Overview
- Program in Genetics and Genomics, Baylor College of Medicine, Houston, Texas 77030, USA
- Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas 77030, USA
- Jan and Dan Duncan Neurological Research Institute at Texas Children's Hospital, Houston, Texas 77030, USA
- Program in Developmental Biology, Baylor College of Medicine, Houston, Texas 77030, USA
- Medical Scientist Training Program, Baylor College of Medicine, Houston, Texas 77030, USA
- Department of Pediatrics, Baylor College of Medicine, Houston, Texas 77030, USA
- Department of Pediatrics, Texas Children's Hospital, Baylor College of Medicine, Houston, Texas 77030, USA
- Department of Neuroscience, Baylor College of Medicine, Houston, Texas 77030, USA
- Howard Hughes Medical Institute, Baylor College of Medicine, Houston, Texas 77030, USA
Abstract
Many neurological diseases impact specific brain regions despite widespread expression of the disease-related protein. Spinocerebellar ataxia type 1 (SCA1) primarily affects the cerebellum, though Ataxin-1 (ATXN1) is widely expressed. We previously showed that intensified interaction between mutant ATXN1 and Capicua (CIC) drives SCA1 pathogenesis in the cerebellum, whereas ATXN1 loss augments amyloid β production in the hippocampus and cortex. CIC, however, forms a complex with ATXN1 and its paralog, Ataxin-1-like (ATXN1L), yet knockout of either yields completely different phenotypes. To determine whether this could be due to CIC having two isoforms, we generated mice bearing either the long (CIC-L) or short (CIC-S) isoform. Loss of CIC-L led to cognitive deficits, whereas loss of CIC-S caused early postnatal lethality, phenocopying ATXN1 and ATXN1L knockout mice, respectively. Furthermore, CIC-L preferentially interacts with ATXN1, and CIC-S with ATXN1L. Our data underscore the importance of isoform–paralog interplay in studying regional vulnerability in neurodegenerative diseases.
Reproduced under the paper's license (CC BY), from the paper cited above.
Code
The paper links to its data, not to its authors' code: see the Data section.
Tracing map
A tracing map links a paper to the code its authors published: this paper has none, so it has no map.
Data
Datasets cited
- geo:GSE310453, at NCBI GEO; found in “Data and material availability”
Data and material availability
All data needed to evaluate the conclusions in this study are present in here and/
Reproduced under the paper's license (CC BY), from the paper cited above.
Versions
The history of this record: each version stored by the harvester or made by a correction of its authors or of the maintainers of its code, and what changed in its facts. The texts of the paper (its abstract, its availability statements) are not part of it; versions that changed only those are not listed.
Version 1, 27 September 2026: the first record
Recorded: type, language, journal, volume, issue, pages, dates, 12 authors, 9 keywords, 9 MeSH terms, 16 funders, 59 references, 1 integrity notice.
Cite
This paper
Lee, H., Gonzalez, E. V., Rivera, E. M., Durham, M. A., Richman, R., Chu, E. H.-Y., Xia, K., Chen, H., Liu, Z., Veeraragavan, S., Shivanna, B., & Zoghbi, H. Y. (2026). Functional divergence of Capicua isoforms explains differential tissue vulnerability in neurological disease. Genes & development, 40(15-16), 1267-1282. https://
BibTeX
@article{lee2026function
author = {Lee, Hamin and Gonzalez, Esmeralda Villavicencio and Rivera, Elias M and Durham, Mark A and Richman, Ronald and Chu, Elizabeth H-Y and Xia, Kailey and Chen, Hu and Liu, Zhandong and Veeraragavan, Surabi and Shivanna, Binoy and Zoghbi, Huda Y},
title = {{Functional divergence of Capicua isoforms explains differential tissue vulnerability in neurological disease}},
journal = {Genes \& development},
year = {2026},
month = aug,
volume = {40},
number = {15-16},
pages = {1267--1282},
publisher = {Cold Spring Harbor Laboratory Press},
issn = {0890-9369},
doi = {10.1101/
url = {https://
pmid = {42476817},
pmcid = {PMC13390769}
}
RIS
TY - JOUR
AU - Lee, Hamin
AU - Gonzalez, Esmeralda Villavicencio
AU - Rivera, Elias M
AU - Durham, Mark A
AU - Richman, Ronald
AU - Chu, Elizabeth H-Y
AU - Xia, Kailey
AU - Chen, Hu
AU - Liu, Zhandong
AU - Veeraragavan, Surabi
AU - Shivanna, Binoy
AU - Zoghbi, Huda Y
TI - Functional divergence of Capicua isoforms explains differential tissue vulnerability in neurological disease
T2 - Genes & development
J2 - Genes Dev
PY - 2026
DA - 2026/
VL - 40
IS - 15-16
SP - 1267
EP - 1282
SN - 0890-9369
PB - Cold Spring Harbor Laboratory Press
DO - 10.1101/
UR - https://
LA - en
ER -
CSL-JSON
{
"id": "10.1101/
"type": "article-journal",
"title": "Functional divergence of Capicua isoforms explains differential tissue vulnerability in neurological disease",
"container-title": "Genes & development",
"author": [
{
"family": "Lee",
"given": "Hamin"
},
{
"family": "Gonzalez",
"given": "Esmeralda Villavicencio"
},
{
"family": "Rivera",
"given": "Elias M"
},
{
"family": "Durham",
"given": "Mark A"
},
{
"family": "Richman",
"given": "Ronald"
},
{
"family": "Chu",
"given": "Elizabeth H-Y"
},
{
"family": "Xia",
"given": "Kailey"
},
{
"family": "Chen",
"given": "Hu"
},
{
"family": "Liu",
"given": "Zhandong"
},
{
"family": "Veeraragavan",
"given": "Surabi"
},
{
"family": "Shivanna",
"given": "Binoy"
},
{
"family": "Zoghbi",
"given": "Huda Y"
}
],
"container-title-short":
"volume": "40",
"issue": "15-16",
"page": "1267-1282",
"DOI": "10.1101/
"PMID": "42476817",
"PMCID": "PMC13390769",
"ISSN": "0890-9369",
"publisher": "Cold Spring Harbor Laboratory Press",
"URL": "https://
"language": "en",
"issued": {
"date-parts": [
[
2026,
8,
3
]
]
}
}
Similar papers
The papers with a page that share the most with this one: the tools found in their code, their categories, datasets, cited references and authors, the rarest counting most.
- [1] doi:10.1126/sciadv.aeb4265 [code]
- Single-nucleus profiling reveals a core disease signature and cell type-specific vulnerabilities in early Rett syndrome.Journal: Science advancesIn common: other condition, mouse, cellular / molecular, 2 authors
- [2] doi:10.1016/j.mocell.2026.100363 [code]
- Tandem repeats in human brain evolution and disease susceptibility.Journal: Molecules and cellsIn common: cellular / molecular, 3 references
- [3] doi:10.1073/pnas.2619797123 [code]
- Selective loss of primary cilia and neurotrophic signaling in G51D α-synuclein mice highlights a common pathway to Parkinson's disease.Journal: Proceedings of the National Academy of Sciences of the United States of AmericaIn common: mouse, cellular / molecular, author Huda Y Zoghbi
- [4] doi:10.3389/fneur.2026.1822479 [code]
- Circulating neuron-derived cfDNA for blood-based detection of Alzheimer's and other neurodegenerative conditions.Journal: Frontiers in neurologyIn common: other condition, 2 references
- [5] doi:10.1038/s41531-026-01360-5 [code]
- Hippocampal atrophy in untreated de novo Parkinson's disease with obstructive sleep apnea.Journal: NPJ Parkinson's diseaseIn common: 2 references
- [6] doi:10.1038/s41597-026-07173-8 [code]
- The Cell Ontology in the age of single-cell omics.Journal: Scientific dataIn common: cellular / molecular, 2 references
- [7] doi:10.1038/s41467-026-73007-1 [code]
- Single-nucleus epigenomic dysregulation unmasks genetic risk-associated neurodegenerative glia states.Journal: Nature communicationsIn common: other condition, cellular / molecular, 1 reference
- [8] doi:10.1038/s44321-026-00421-9
- Targeted cellular micropharmacies deliver therapeutic agents to the brain.Journal: EMBO molecular medicineIn common: mouse, cellular / molecular, 1 reference
- [9] doi:10.1186/s12859-026-06490-4 [code]
- Tissueformer: extending single-cell foundation models to predict population-level phenotypes.Journal: BMC bioinformaticsIn common: other condition, mouse, cellular / molecular, 1 reference
- [10] doi:10.1158/2767-9764.crc-25-0639 [code]
- Interleukin-34-Induced Arg1+ Macrophages Play a Key Role in Breast Cancer Brain Metastasis.Journal: Cancer research communicationsIn common: other condition, mouse, 1 reference
Contribute
The authors of this paper can claim it, correct its record and validate its tracing map, and the maintainers of its code (its owner, or a public member of its organization) correct what it says of their repository; anyone signed in can ask for its removal. Every request goes to OSCR's own machine, which answers it; your account page follows them.
Sign in with ORCID to claim this paper as one of its authors, correct its record or validate its tracing map: when the paper's metadata lists your ORCID iD, you are recognized at once. Maintainers of its code: sign in with GitHub, then claim the repository on your account page.
Claim this paper
Correct its record
Say what each link of this record is, remove the ones that are not the paper's, add the ones that are missing. The correction becomes a new version of the record, in its Versions section.
Request its removal
To ask OSCR to remove this record, the copies of its authors' scripts or its tracing map, use the removal request page: signed in, you say who you are, what to remove and why, then review and confirm the request. Published rules decide every request (how).
Discussion, reproductions, activity
Discussion: questions and error reports about this paper and its code, from signed-in readers and its authors. It opens with sign-in.
Reproductions: reports from readers who ran the authors' code: what they reproduced, with which environment, commit and data. It opens with sign-in.
Activity: what happens around this paper: new versions of its record, its map's validation, discussions and reproductions. It opens with sign-in.
