OSCR

Automated quality control of small animal MR neuroimaging data.

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Code

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aswendt-lab

License: none: the authors keep all their rights
State: the link answers

Aswendt-Lab/AIDAqc

License: GPL-3.0
State: the link answers
Copies: kept by the registry: this license allows it

Aswendt-Lab/AIDAmri

License: GPL-3.0
State: the link answers
Copies: kept by the registry: this license allows it
Tools found in the code: AllenSDK, ANTs, DIPY, FSL, LMFIT, Matplotlib, NiBabel, Tools for NIfTI and ANALYZE image (MATLAB), Nilearn, Nipype, NumPy, OpenCV, pandas, scikit-learn, SciPy, seaborn

Overview

Authors: Aref Kalantari, Mehrab Shahbazi, Marc Schneider, Adam C. Raikes, Victor Vera Frazão, Avnish Bhattrai, Lorenzo Carnevale, Yujian Diao, Bart A. A. Franx, Francesco Gammaraccio, Lisa-Marie Goncalves, Susan Lee, Esther M. van Leeuwen, Annika Michalek, Susanne Mueller, Alejandro Rivera Olvera, Daniel Padro, Mohamed Kotb Selim, Annette van der Toorn, Federico Varriano
and 26 other authorsRoël Vrooman, Patricia Wenk, H. Elliott Albers, Philipp Boehm-Sturm, Eike Budinger, Santiago Canals, Silvia De Santis, Roberta Diaz Brinton, Rick M. Dijkhuizen, Elisenda Eixarch, Gianluigi Forloni, Joanes Grandjean, Khan Hekmatyar, Russell E. Jacobs, Ileana Jelescu, Nyoman D. Kurniawan, Giuseppe Lembo, Dario Livio Longo, Naomi S. Sta Maria, Edoardo Micotti, Emma Muñoz-Moreno, Pedro Ramos-Cabrer, Wilfried Reichardt, Guadalupe Soria, Giovanna D. Ielacqua, Markus Aswendt
Journal: Imaging neuroscience (Cambridge, Mass.)
Published: 17 October 2024
Type: Research article
Status: code verified (how the code is found and verified)
DOI: 10.1162/imag_a_00317
License: CC BY
Institutions: University of Cologne (Germany), University Hospital Cologne (Germany), Hamedan University of Technology (Iran), University of Arizona (United States), Istituto Neurologico Mediterraneo (Italy), Centre Hospitalier Universitaire Vaudois (Switzerland), Centre d'Imagerie BioMedicale (Switzerland), University Medical Center Utrecht (Netherlands), Institute of Biostructure and Bioimaging (Italy), National Research Council (Italy), Leibniz Institute for Neurobiology (Germany), Georgia State University (United States), NeuroCure Cluster of Excellence (Germany), Center for Stroke Research Berlin (Germany), Charité – Universitätsmedizin Berlin (Germany), Radboud University Nijmegen (Netherlands), Radboud University Medical Center (Netherlands), Donders Institute for Brain, Cognition and Behaviour (Netherlands), CIC biomaGUNE (Spain), Instituto de Neurociencias (Spain), Centre for Biomedical Network Research on Rare Diseases (Spain), Centro de Investigación Biomédica en Red (Spain), Consorci Institut D'Investigacions Biomediques August Pi I Sunyer (Spain), Universitat de Barcelona (Spain), Mario Negri Institute for Pharmacological Research (Italy), University of Southern California (United States), The University of Queensland (Australia), Sapienza University of Rome (Italy), University of Turin (Italy), Ikerbasque (Spain), University of Freiburg (Germany), University Medical Center Freiburg (Germany), Instituto de Salud Carlos III (Spain), Max Delbrück Center (Germany), Center for Behavioral Brain Sciences (Germany)
Categories: structural MRI / diffusion (modality), other (organism), methods / tools (subfield)

Data

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.. image:: https://openscicode.org/badge/doi/10.1162/imag_a_00317.svg
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   :alt: OSCR

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