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Cortically Mediated Muscle Responses to Balance Perturbations Increase with Perturbation Magnitude in Older Adults with and without Parkinson's Disease.

Code ↔ Paper

5 matches between paragraphs of the paper and lines of its authors' code, computed by the harvester (lexical-v1). Click a colored paragraph or line to see its counterpart.

The 5 matches · all tie a paragraph to a whole file, not to given lines: weak matches, whose lines are not tinted
  1. [1] § Materials and Methods › Model parameter identification ↔ fitResidualSRM_CoM.m, the whole file · a weak match · score 0.83 · upper bounds, initial guess, MaxFunEvals, TolFun, TolX, fmincon
  2. [2] § Materials and Methods › Model parameter identification ↔ fitResidualSRM_eeg.m, the whole file · a weak match · score 0.83 · upper bounds, initial guess, MaxFunEvals, TolFun, TolX, fmincon
  3. [3] § Materials and Methods › Goodness of fit ↔ rsqr_uncentered.m, the whole file · a weak match · score 0.59 · uncentered correlation coefficient, regress, square, reconstructions
  4. [4] § Materials and Methods › Model parameter identification ↔ modelIPI.m, the whole file · a weak match · score 0.58 · squared error, penalizes, minimize, fmincon, optimizations, weighted
  5. [5] § Results › Correlations to clinical measures ↔ plotExemplarSRMFits.m, the whole file · a weak match · score 0.57 · MDS UPDRS III, PD duration

Paper

Loaded from Europe PMC by your browser, not stored by OSCR: doi.org · Europe PMC

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The authors' code

MATLAB · 43 lines · 1.5 KB · no license · 1 match

  1. function [xBraking, eBraking, fitsBraking] = fitResidualSRM_CoM(e,atime,predictors,subjID,magnitude,LB,UB)
  2. % fit residuals using beta power.
  3. % load optimization options. these include overall cost function options as
  4. % well as direct options for the Matlab optimizer.
  5. optimizationParameters = loadOptimizationParameters();
  6. options = optimoptions('fmincon',...
  7. 'display',optimizationParameters.display,...
  8. 'TolX',optimizationParameters.TolX,...
  9. 'TolFun',optimizationParameters.TolFun,...
  10. 'MaxFunEvals',optimizationParameters.MaxFunEvals...
  11. );
  12. %Initial guess is midpoint of lower and upper bounds (LB and UB, respectively)
  13. X0 = (UB-LB)/2;
  14. gainFlag = [true true true false];
  15. if (strcmp(subjID,'HOA19') & magnitude == 7.5)
  16. X0(end) = 0.200; %manually set ctx CoM delay
  17. UB(end) = 0.250;
  18. end
  19. fixBurstGain = true;
  20. if fixBurstGain
  21. burstGain = max(e(1,atime>0.150&atime<0.600))/max(predictors(1,:));
  22. [X0(1),UB(1)] = deal(max(min(burstGain,15),0));
  23. LB(1) = 0.9 * X0(1);
  24. end
  25. [X,FVAL,EXITFLAG] = fmincon(@(X) jigsawPassthrough(X,predictors,gainFlag,atime,e,optimizationParameters),X0,[],[],[],[],LB,UB,[],options);
  26. xBraking = X;
  27. eBraking = assembleChannel(predictors,X(gainFlag),X(~gainFlag),atime);
  28. fitParameters = modelIPI('X',X,'eRecon',eBraking,'e',e,'optimizationParameters',optimizationParameters,'gainWeight',double(gainFlag));
  29. fitsBraking(1) = fitParameters.r2;
  30. fitsBraking(2) = fitParameters.r2u;
  31. fitsBraking(isnan(fitsBraking)) = 0;
  32. end % fit residusls w/ coM

fitResidualSRM_CoM.m at commit 0e0b94b, no license · at the source

Overview

Authors: Scott E Boebinger1, Aiden M Payne2, Jifei Xiao1, Giovanni Martino3, Michael R Borich1,4, J Lucas McKay5,6, Lena H Ting1,4
  1. Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology & Emory University, Atlanta, Georgia 30322
  2. Department of Physical Therapy, College of Health Sciences and Professions, Ohio University, Athens, Ohio 45701
  3. Department of Biomedical Sciences, University of Padova, Padua 35131, Italy
  4. Division of Physical Therapy, Department of Rehabilitation Medicine, Emory University, Atlanta, Georgia 30322
  5. Department of Neurology, Emory University, Atlanta, Georgia 30322
  6. Department of Biomedical Informatics, Emory University, Atlanta, Georgia 30322
Institutions: Georgia Institute of Technology (United States); Emory University (United States); The Wallace H. Coulter Department of Biomedical Engineering (United States); Ohio University (United States); University of Padua (Italy)
Journal: eNeuro, volume 13, issue 4, pages ENEURO.0423-25.2026
Dates: received 18 November 2025; accepted 16 February 2026; published online 1 April 2026; in print April 2026
Type: Research article · Language: English
License: CC BY
Identifiers: DOI 10.1523/eneuro.0423-25.2026 · PMID 41871956 · PMCID PMC13064419 · OpenAlex W7140134704
Open access: gold, a free copy (OpenAlex)
Status: code verified
Categories: other (modality), human (organism), Parkinson's (population), systems (subfield)
Methods: Spectral & time-frequency, Connectivity, Statistics, Smoothing, state filtering, decompositions, Physiology & signal measures
Keywords: aging, balance control, modeling, Parkinson’s disease, sensorimotor transformations
MeSH: Aging*, Muscle, Skeletal*, Parkinson Disease*, Postural Balance*, Aged, Biomechanical Phenomena, Electromyography, Female, Humans, Male, Middle Aged, Reaction Time (* major topic)
Topic: Balance, Gait, and Falls Prevention (Physical Therapy, Sports Therapy and Rehabilitation, Health Professions), according to OpenAlex
Funding: NICHD NIH HHS (R01 HD046922); NIA NIH HHS (R01 AG072756); NIBIB NIH HHS (T32 EB025816)
Citations: cited by 3 papers (Europe PMC); 68 references in the paper

Abstract

We lack a mechanistic understanding of how cortical contributions to balance control change in aging and Parkinson's disease (PD). Balance is governed by brainstem circuits, with higher-order centers like the cortex or basal ganglia becoming engaged as challenge increases or balance health declines. We previously showed that parallel sensorimotor feedback loops engaging brainstem and cortical circuitry contribute to muscle activity for balance control in young adults (YAs). Here, we analyze data from male and female older adults (OAs) with and without PD, decomposing perturbation-evoked tibialis anterior and medial gastrocnemius muscle activity into hierarchical components based on latencies of feedback control loops. We found that balance-correcting muscle activity followed a stereotypical waveform of long-latency responses (LLRs): LLR1 began ∼120 ms and LLR2 occurred ∼210 ms, respectively, consistent with subcortical and cortical feedback latencies. Both LLRs increased with balance challenge and could be explained by center of mass kinematics. Perturbation-evoked antagonist muscle activity consisted of destabilizing and stabilizing components categorized based on whether they resist the kinematic errors that drive their activation. The destabilizing component occurred at ∼180 ms and was negatively correlated with clinical measures of balance ability in the OA but not PD group. Exploratory comparisons showed OA and PD groups had larger LLR2s at lower challenge levels than YAs, consistent with greater cortical engagement during balance with aging. These findings demonstrate that a neuromechanical model can decompose perturbation-evoked muscle activity into hierarchical components related to clinical balance ability and identify mechanistic changes in the neural control of balance without direct brain measurements.

Reproduced under the paper's license (CC BY), from the paper cited above.

Repository

Its files are read in the Code ↔ Paper reader above, with 5 matches between paragraphs and lines of code.

Neuromechanics-Lab/HOA_PD_SRM

License: none: the authors keep all their rights
State: the link answers, verified on 28 September 2026
Evidence: files inventoried
Commit: 0e0b94baa0d23d4514724d78040999dff2f98a75, 18 November 2025
Languages: MATLAB (43), R (3)
Size: 47 files, 46 scripts
Software Heritage: not archived
Found in: “Code accessibility”
Not found: README, license file, CITATION.cff, environment file, tests, continuous integration, documentation
Tools: Optimization Toolbox (10 files), afex (3 files), car (3 files), EEGLAB (3 files), emmeans (3 files), ggplot2 (3 files), lmerTest (3 files), Statistics and Machine Learning Toolbox (3 files), reshape2 (3 files), tidyverse (3 files)
Availability: 1 check, the latest on 28 September 2026: the link answers
  • 28 September 2026: the link answers
46 files

Code accessibility

The custom code used for neuromechanical modeling, figure generation, and statistical analysis is freely available on GitHub via https://github.com/Neuromechanics-Lab/HOA_PD_SRM.

Reproduced under the paper's license (CC BY), from the paper cited above.

Tracing map

Proposed by the machine: these links were found in the paper and verified at the source, without human review. The map will receive a Zenodo DOI once one of the paper's authors has validated it with their ORCID.

What the map holds:

  • 1 repository of the authors' code, each at its verified commit, with its license and how the link was found in the paper;
  • 46 scripts, each with its path and the digest of its content;
  • 5 matches between paragraphs of the paper and lines of the code (method lexical-v1);
  • neither the text of the paper nor the code itself.

Its JSON (tracing-map.json) is deposited on Zenodo with its DOI once the map is validated.

Data

No dataset and no data link were found in the paper.

Versions

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Version 1, 28 September 2026: the first record

Recorded: type, language, journal, volume, issue, pages, dates, 7 authors, 5 keywords, 12 MeSH terms, 3 funders, 64 references.

Cite

This paper

Boebinger, S. E., Payne, A. M., Xiao, J., Martino, G., Borich, M. R., Lucas McKay, J., & Ting, L. H. (2026). Cortically Mediated Muscle Responses to Balance Perturbations Increase with Perturbation Magnitude in Older Adults with and without Parkinson's Disease. eNeuro, 13(4), ENEURO.0423-25.2026. https://doi.org/10.1523/eneuro.0423-25.2026

BibTeX

@article{boebinger2026cortically,
author = {Boebinger, Scott E and Payne, Aiden M and Xiao, Jifei and Martino, Giovanni and Borich, Michael R and Lucas McKay, J and Ting, Lena H},
title = {{Cortically Mediated Muscle Responses to Balance Perturbations Increase with Perturbation Magnitude in Older Adults with and without Parkinson's Disease}},
journal = {eNeuro},
year = {2026},
month = apr,
volume = {13},
number = {4},
pages = {ENEURO.0423--25.2026},
publisher = {Society for Neuroscience},
issn = {2373-2822},
doi = {10.1523/eneuro.0423-25.2026},
url = {https://doi.org/10.1523/eneuro.0423-25.2026},
pmid = {41871956},
pmcid = {PMC13064419}
}

RIS

TY - JOUR
AU - Boebinger, Scott E
AU - Payne, Aiden M
AU - Xiao, Jifei
AU - Martino, Giovanni
AU - Borich, Michael R
AU - Lucas McKay, J
AU - Ting, Lena H
TI - Cortically Mediated Muscle Responses to Balance Perturbations Increase with Perturbation Magnitude in Older Adults with and without Parkinson's Disease
T2 - eNeuro
J2 - eNeuro
PY - 2026
DA - 2026/04/01
VL - 13
IS - 4
SP - ENEURO.0423
EP - 25.2026
SN - 2373-2822
PB - Society for Neuroscience
DO - 10.1523/eneuro.0423-25.2026
UR - https://doi.org/10.1523/eneuro.0423-25.2026
LA - en
ER -

CSL-JSON

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"id": "10.1523/eneuro.0423-25.2026",
"type": "article-journal",
"title": "Cortically Mediated Muscle Responses to Balance Perturbations Increase with Perturbation Magnitude in Older Adults with and without Parkinson's Disease",
"container-title": "eNeuro",
"author": [
{
"family": "Boebinger",
"given": "Scott E"
},
{
"family": "Payne",
"given": "Aiden M"
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{
"family": "Xiao",
"given": "Jifei"
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{
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"given": "Giovanni"
},
{
"family": "Borich",
"given": "Michael R"
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{
"family": "Lucas McKay",
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"given": "Lena H"
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],
"container-title-short": "eNeuro",
"volume": "13",
"issue": "4",
"page": "ENEURO.0423-25.2026",
"DOI": "10.1523/eneuro.0423-25.2026",
"PMID": "41871956",
"PMCID": "PMC13064419",
"ISSN": "2373-2822",
"publisher": "Society for Neuroscience",
"URL": "https://doi.org/10.1523/eneuro.0423-25.2026",
"language": "en",
"issued": {
"date-parts": [
[
2026,
4,
1
]
]
}
}

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