OSCR

Multi-omic phenotyping of MAPT V337M neurons reveals early changes in axonogenesis and tau phosphorylation.

Overview

Authors: Gregory A. Mohl1,2, Gary Dixon1, Emily Marzette1, Justin McKetney3,4,5, Avi J. Samelson1, Carlota Pereda Serras1,6, Julianne Jin1, Nabeela Ariqat1, Andrea Keys1, Cristian Chavira1, Andrew Li1, Steven C. Boggess1, Danielle L. Swaney3,4,5, Martin Kampmann1,7
  1. Institute for Neurodegenerative Diseases, University of California San Francisco,San Francisco, CA USA
  2. Department of Neurology, University of California San Francisco,San Francisco, CA USA
  3. Gladstone Data Science and Biotechnology Institute, The J. David Gladstone Institutes,San Francisco, CA USA
  4. Quantitative Bioscience Institute, University of California San Francisco,San Francisco, CA USA
  5. Department of Cellular and Molecular Pharmacology, University of California San Francisco,San Francisco, CA USA
  6. Bakar Computational Health Sciences Institute, University of California San Francisco,San Francisco, CA USA
  7. Department of Biochemistry and Biophysics, University of California San Francisco,San Francisco, CA USA
Institutions: University of California, San Francisco (United States); Gladstone Institutes (United States)
Journal: NPJ dementia, volume 2, issue 1, article 24
Dates: received 24 August 2025; accepted 6 March 2026; published online 25 April 2026; in print 2026
Type: Research article · Language: English
License: CC BY
Identifiers: DOI 10.1038/s44400-026-00076-w · PMID 42046563 · PMCID PMC13110130 · OpenAlex W7155651581
Open access: hybrid, a free copy (OpenAlex)
Status: code verified
Categories: genetics / omics (modality), Alzheimer's / dementia (population), cellular / molecular (subfield)
Methods: Statistics, Smoothing, state filtering, decompositions
Keywords: Cell biology, Molecular biology, Neurology, Neuroscience
Topic: Alzheimer's disease research and treatments (Physiology, Medicine), according to OpenAlex
Funding: A.P. Gianni Foundation (Postdoctoral Fellowship); National Institute for neurological disorders and stroke (U54 NS123746, U54 NS100717); National Institute on Aging (F32 AG063487, R01 AG062359); Alzheimer’s Association (23AARF-1027616); Rainwater Charitable Foundation (Tau Consortium Award); Chan Zuckerberg Initiative (CZI) (Ben Barres Early Career Acceleration Award)
Citations: cited by 1 paper (Europe PMC); 93 references in the paper

Abstract

Tau aggregation is a hallmark of several neurodegenerative diseases, including Alzheimer’s disease and frontotemporal dementia. There are disease-causing variants of the tau-encoding gene, MAPT, and the presence of tau aggregates is highly correlated with disease progression. However, the molecular mechanisms linking pathological tau to neuronal dysfunction are not well understood. This is in part due to an incomplete understanding of the normal functions of tau in development and aging, and how the associated molecular and cellular processes change in the context of causal disease variants of tau. To address these questions in an unbiased manner, we conducted multi-omic characterization of iPSC-derived neurons harboring the MAPT V337M mutation or MAPT knockdown. RNA-seq, ATAC-seq, and phosphoproteomics revealed that both the V337M mutation and tau knockdown perturbed levels of transcripts and phosphorylation of proteins related to axonogenesis or axon morphology. When we directly measured axonogenesis, we found that both MAPT V337M and MAPT knockdown caused decreased axon length. Surprisingly, we found that neurons with V337M tau had much lower tau phosphorylation than neurons with WT tau. CRISPR-based screens uncovered regulators of tau phosphorylation in neurons and found that factors involved in axonogenesis modified tau phosphorylation in both MAPT WT and MAPT V337M neurons. Intriguingly, the p38 MAPK pathway specifically modified tau phosphorylation in MAPT V337M neurons. We propose that V337M tau perturbs tau phosphorylation and axon morphology pathways that are relevant to the normal function of tau in development, which could contribute to previously reported cognitive changes in preclinical MAPT variant carriers.

Reproduced under the paper's license (CC BY), from the paper cited above.

Code

No file of the authors' code could be read here: it is described below, and read at its source.

kampmannlab.ucsf.edu/resources

License: none: the authors keep all their rights
State: the link answers, verified on 30 September 2026
Evidence: the link answers
Software Heritage: not checked
Found in: the text, “CRISPR screening”
Not found: README, license file, CITATION.cff, environment file, tests, continuous integration, documentation
Availability: 1 check, the latest on 30 September 2026: the link answers (HTTP 200)
  • 30 September 2026: the link answers (HTTP 200)

Tracing map

Proposed by the machine: these links were found in the paper and verified at the source, without human review. The map will receive a Zenodo DOI once one of the paper's authors has validated it with their ORCID.

What the map holds:

  • 1 repository of the authors' code, each at its verified commit, with its license and how the link was found in the paper;
  • 0 scripts, each with its path and the digest of its content;
  • no match between paragraphs and code yet;
  • neither the text of the paper nor the code itself.

Its JSON (tracing-map.json) is deposited on Zenodo with its DOI once the map is validated.

Data

No dataset and no data link were found in the paper.

Data availability

Data is provided within the manuscript or supplementary information files

Reproduced under the paper's license (CC BY), from the paper cited above.

Versions

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Version 1, 30 September 2026: the first record

Recorded: type, language, journal, volume, issue, pages, dates, 14 authors, 4 keywords, 6 funders, 90 references.

Cite

This paper

Mohl, G. A., Dixon, G., Marzette, E., McKetney, J., Samelson, A. J., Serras, C. P., Jin, J., Ariqat, N., Keys, A., Chavira, C., Li, A., Boggess, S. C., Swaney, D. L., & Kampmann, M. (2026). Multi-omic phenotyping of MAPT V337M neurons reveals early changes in axonogenesis and tau phosphorylation. NPJ dementia, 2(1), 24. https://doi.org/10.1038/s44400-026-00076-w

BibTeX

@article{mohl2026multi,
author = {Mohl, Gregory A. and Dixon, Gary and Marzette, Emily and McKetney, Justin and Samelson, Avi J. and Serras, Carlota Pereda and Jin, Julianne and Ariqat, Nabeela and Keys, Andrea and Chavira, Cristian and Li, Andrew and Boggess, Steven C. and Swaney, Danielle L. and Kampmann, Martin},
title = {{Multi-omic phenotyping of MAPT V337M neurons reveals early changes in axonogenesis and tau phosphorylation}},
journal = {NPJ dementia},
year = {2026},
month = apr,
volume = {2},
number = {1},
pages = {24},
publisher = {Springer Science+Business Media},
issn = {3005-1940},
doi = {10.1038/s44400-026-00076-w},
url = {https://doi.org/10.1038/s44400-026-00076-w},
pmid = {42046563},
pmcid = {PMC13110130}
}

RIS

TY - JOUR
AU - Mohl, Gregory A.
AU - Dixon, Gary
AU - Marzette, Emily
AU - McKetney, Justin
AU - Samelson, Avi J.
AU - Serras, Carlota Pereda
AU - Jin, Julianne
AU - Ariqat, Nabeela
AU - Keys, Andrea
AU - Chavira, Cristian
AU - Li, Andrew
AU - Boggess, Steven C.
AU - Swaney, Danielle L.
AU - Kampmann, Martin
TI - Multi-omic phenotyping of MAPT V337M neurons reveals early changes in axonogenesis and tau phosphorylation
T2 - NPJ dementia
J2 - NPJ Dement
PY - 2026
DA - 2026/04/25
VL - 2
IS - 1
SP - 24
SN - 3005-1940
PB - Springer Science+Business Media
DO - 10.1038/s44400-026-00076-w
UR - https://doi.org/10.1038/s44400-026-00076-w
LA - en
ER -

CSL-JSON

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