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Sleep spindles are linked to white matter connectivity differentially in older adults with and without cognitive impairment.

Code ↔ Paper

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The 2 matches
  1. [1] § Materials and methods › Participants ↔ DWI_EEG_osf.Rmd, lines 157–199 · score 0.74 · cholinesterase inhibitors, mood stabilizers, PSG, hypnotics, sedatives, MMSE
  2. [2] § Materials and methods › Overnight polysomnography ↔ DWI_EEG_osf.Rmd, lines 157–199 · score 0.58 · sleep onset, sleep efficiency, scoring, wake, events, architecture

Paper

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The authors' code

R Markdown · 1,196 lines · 47 KB · no license · 2 matches

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Overview

Authors: Aaron Lam1,2,3, Shawn Dexiao Kong1,2, Jake R Palmer1,2, Fernando Calamante4, Hannes Almgren4, Angela L D’Rozario1,3,5, Sharon L Naismith1,2
  1. School of Psychology, The University of Sydney, Sydney, NSW 2050, Australia
  2. Brain and Mind Centre and Charles Perkins Centre, The University of Sydney, Sydney 2050, NSW, Australia
  3. CIRUS, Sleep and Circadian Research Group, Woolcock Institute of Medical Research, Macquarie University, Sydney 2113, NSW, Australia
  4. Sydney Imaging and School of Biomedical Engineering, The University of Sydney, Sydney 2050, NSW, Australia
  5. School of Psychological Sciences, Macquarie University, Sydney 2113, NSW, Australia
Journal: Brain communications, volume 8, issue 4, article fcag303
Dates: received 18 December 2025; accepted 29 July 2026; published online 10 August 2026
Type: Research article · Language: English
License: CC BY
Identifiers: DOI 10.1093/braincomms/fcag303 · PMID 42582630 · PMCID PMC13458153 · OpenAlex W7202139527
Open access: gold, a free copy (OpenAlex)
Status: code verified
Categories: structural MRI / diffusion (modality), EEG (modality), human (organism), Alzheimer's / dementia (population), systems (subfield)
Methods: Spectral & time-frequency, Connectivity, Statistics, Preprocessing, fMRI & imaging
Keywords: dementia, ageing, memory, neuroimaging, slow oscillations
Topic: Sleep and Wakefulness Research (Cognitive Neuroscience, Neuroscience), according to OpenAlex
Funding: National Health and Medical Research Council (GNT2008001); Centre of Research Excellence to Optimise Sleep in Brain Ageing and Neurodegeneration (GNT1152945); Synergise, Integrate and Enhance Sleep Research to Transform Brain Ageing; SIESTA (GNT2018668, GNT1135639)
Citations: not cited yet (Europe PMC); 69 references in the paper

Abstract

While sleep disturbance increases with age and neurodegeneration, the relationship between sleep micro-architecture and changes in key white matter tracts is unknown. We aimed to determine how sleep spindles and slow oscillations relate to structural connectivity within selected white matter tracts in older adults at risk for dementia. In this cross-sectional study, 67 participants (mean age = 68.1; 47 females) with subjective cognitive decline (n = 21) or mild cognitive impairment (n = 46) underwent neuropsychological assessment, magnetic resonance imaging and polysomnography. White matter connectivity of anterior thalamic radiation and superior longitudinal fasciculus subdivisions II and III was quantified using whole-brain tractography, with left and right tracts combined. Primary sleep micro-architecture outcomes included slow (11–13 Hz) and fast (13–16 Hz) spindle density and slow oscillation (0.25–1 Hz) power. Secondary outcomes included: overall spindle density (11–16 Hz) and amplitude. Linear regressions assessed associations between sleep micro-architecture and structural connectivity, adjusting for age and sex, with cognitive classification as a moderator. Multiple comparisons were controlled for using the Benjamini–Hochberg false discovery rate procedure, with q < 0.1 considered statistically significant. The mild cognitive impairment group exhibited lower frontal and central fast spindle density compared to the subjective cognitive impairment group (P < 0.05), with no other group differences in sleep macro-architecture or slow oscillatory activity. After false discovery rate correction, there were no significant associations between slow spindle density, fast spindle density or slow oscillation power and tract connectivity. An interaction between central fast spindle density and superior longitudinal fasciculus III connectivity was observed prior to false discovery rate correction, explaining 8% of unique variance, but did not remain significant after correction (q > 0.10). Exploratory analyses reveal a significant interaction between superior longitudinal fasciculus II connectivity and cognitive classification on spindle amplitude, with greater connectivity associated with higher spindle amplitude in individuals with mild cognitive impairment (P = 0.001), but not in those with subjective cognitive decline (P > 0.05). Overall, white matter connectivity of the anterior thalamic radiation and superior longitudinal fasciculus was not robustly associated with sleep spindle density or slow oscillatory power in this at-risk cohort. However, superior longitudinal fasciculus II connectivity may differentially relate to spindle amplitude in mild cognitive impairment, potentially reflecting altered thalamocortical network engagement in early neurodegeneration.

Reproduced under the paper's license (CC BY), from the paper cited above.

Repository

Its files are read in the Code ↔ Paper reader above, with 2 matches between paragraphs and lines of code.

OSF uy7jk

License: none: the authors keep all their rights
State: the link answers, verified on 27 September 2026
Evidence: files inventoried
Languages: R (1)
Size: 1 file, 1 script
Software Heritage: not checked
Found in: “Data availability”
Holds: 1 notebook
Not found: README, license file, CITATION.cff, environment file, tests, continuous integration, documentation
Tools: easystats (1 file), ggplot2 (1 file), tidyverse (1 file)
Availability: 1 check, the latest on 27 September 2026: the link answers (HTTP 200)
  • 27 September 2026: the link answers (HTTP 200)
1 file, to read at the source

This repository has no license: its authors keep all rights. Read it at the source.

At the source: osf.io/uy7jk

The paper's code and data availability statement is in the Data section.

Tracing map

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  • 2 matches between paragraphs of the paper and lines of the code (method lexical-v1);
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Data

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Data availability

Due to ethical considerations, data used in this article will be shared upon reasonable request to the corresponding author. The code supporting the findings of this study is available at: osf.io/uy7jk.

Reproduced under the paper's license (CC BY), from the paper cited above.

Versions

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Version 1, 27 September 2026: the first record

Recorded: type, language, journal, volume, issue, pages, dates, 7 authors, 5 keywords, 4 funders, 63 references.

Cite

This paper

Lam, A., Kong, S. D., Palmer, J. R., Calamante, F., Almgren, H., D’Rozario, A. L., & Naismith, S. L. (2026). Sleep spindles are linked to white matter connectivity differentially in older adults with and without cognitive impairment. Brain communications, 8(4), fcag303. https://doi.org/10.1093/braincomms/fcag303

BibTeX

@article{lam2026sleep,
author = {Lam, Aaron and Kong, Shawn Dexiao and Palmer, Jake R and Calamante, Fernando and Almgren, Hannes and D’Rozario, Angela L and Naismith, Sharon L},
title = {{Sleep spindles are linked to white matter connectivity differentially in older adults with and without cognitive impairment}},
journal = {Brain communications},
year = {2026},
month = aug,
volume = {8},
number = {4},
pages = {fcag303},
publisher = {Oxford University Press},
issn = {2632-1297},
doi = {10.1093/braincomms/fcag303},
url = {https://doi.org/10.1093/braincomms/fcag303},
pmid = {42582630},
pmcid = {PMC13458153}
}

RIS

TY - JOUR
AU - Lam, Aaron
AU - Kong, Shawn Dexiao
AU - Palmer, Jake R
AU - Calamante, Fernando
AU - Almgren, Hannes
AU - D’Rozario, Angela L
AU - Naismith, Sharon L
TI - Sleep spindles are linked to white matter connectivity differentially in older adults with and without cognitive impairment
T2 - Brain communications
J2 - Brain Commun
PY - 2026
DA - 2026/08/11
VL - 8
IS - 4
SP - fcag303
SN - 2632-1297
PB - Oxford University Press
DO - 10.1093/braincomms/fcag303
UR - https://doi.org/10.1093/braincomms/fcag303
LA - en
ER -

CSL-JSON

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