Neuronal YTHDF2 suppresses innate immune activation in Aβ pathology by promoting m<sup>6</sup>A-dependent decay of cytosolic mitochondrial mRNAs.
Overview
- Department of Pathology, Institute of Basic Medical Sciences & School of Basic Medicine, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100005, China
- Center for Experimental Animal Research, Institute of Basic Medical Sciences & School of Basic Medicine, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100005, China
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
- State Key Laboratory of Common Mechanism Research for Major Diseases, Institute of Basic Medical Sciences & School of Basic Medicine, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100005, China
- State Key Laboratory of Complex, Severe, and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100730, China
Abstract
Dysregulation of RNA m6A modification has been implicated in Alzheimer’s disease (AD), but the molecular mechanisms remain largely unclear. Here, we identified the presence of m6A on mitochondria-encoded messenger RNAs (mt-mRNAs) in the brain, with elevated levels correlated with amyloid-β (Aβ) deposition. Under physiological conditions, cytosolic m6A-modified mt-Nd4 is recognized and degraded by the m6A reader protein YTHDF2, thereby preventing aberrant activation of the RIG-I–MAVS innate immune pathway in neurons. Under Aβ-associated pathological conditions, YTHDF2 expression is markedly down-regulated in neurons, leading to the accumulation of m6A-modified mt-Nd4 in the cytosol. This accumulation triggers RIG-I–MAVS activation and type I interferon (IFN) responses. Neuron-derived IFN-β then amplifies neuroinflammation by activating surrounding microglia through a paracrine mechanism. Furthermore, neuronal Ythdf2 deficiency exacerbates Aβ-associated neuroinflammation and cognitive decline. Together, these findings reveal a previously unrecognized m6A/
Reproduced under the paper's license (CC BY-NC), from the paper cited above.
Code
The paper links to its data, not to its authors' code: see the Data section.
The paper's code and data availability statement is in the Data section.
Tracing map
A tracing map links a paper to the code its authors published: this paper has none, so it has no map.
Data
Datasets cited
- geo:GSE266459, at NCBI GEO; found in the text, “RNA-seq analysis”
Data, code, and materials availability
All data and code needed to evaluate and reproduce the results in the paper are present in the paper and/
Reproduced under the paper's license (CC BY-NC), from the paper cited above.
Versions
The history of this record: each version stored by the harvester or made by a correction of its authors or of the maintainers of its code, and what changed in its facts. The texts of the paper (its abstract, its availability statements) are not part of it; versions that changed only those are not listed.
Version 1, 27 September 2026: the first record
Recorded: type, language, journal, volume, issue, pages, dates, 15 authors, 17 MeSH terms, 81 references.
Cite
This paper
Pan, W., Yang, L., Zhang, Y., Chen, Y., Xu, Y., Li, Y., Fu, Y., Ma, C., Liu, C., Li, Q., Liu, H., Wang, H., Xu, Q., Tong, W.-M., & Niu, Y. (2026). Neuronal YTHDF2 suppresses innate immune activation in Aβ pathology by promoting m&
BibTeX
@article{pan2026neuronal
author = {Pan, Wenqi and Yang, Lin and Zhang, Yao and Chen, Yan and Xu, Yuesi and Li, Yifan and Fu, Yujie and Ma, Chunhui and Liu, Chunying and Li, Qing and Liu, Hailong and Wang, Hailin and Xu, Qi and Tong, Wei-Min and Niu, Yamei},
title = {{Neuronal YTHDF2 suppresses innate immune activation in Aβ pathology by promoting m\&
journal = {Science advances},
year = {2026},
month = jun,
volume = {12},
number = {25},
pages = {eadz0887},
publisher = {American Association for the Advancement of Science},
issn = {2375-2548},
doi = {10.1126/
url = {https://
pmid = {42319929},
pmcid = {PMC13281811}
}
RIS
TY - JOUR
AU - Pan, Wenqi
AU - Yang, Lin
AU - Zhang, Yao
AU - Chen, Yan
AU - Xu, Yuesi
AU - Li, Yifan
AU - Fu, Yujie
AU - Ma, Chunhui
AU - Liu, Chunying
AU - Li, Qing
AU - Liu, Hailong
AU - Wang, Hailin
AU - Xu, Qi
AU - Tong, Wei-Min
AU - Niu, Yamei
TI - Neuronal YTHDF2 suppresses innate immune activation in Aβ pathology by promoting m&
T2 - Science advances
J2 - Sci Adv
PY - 2026
DA - 2026/
VL - 12
IS - 25
SP - eadz0887
SN - 2375-2548
PB - American Association for the Advancement of Science
DO - 10.1126/
UR - https://
LA - en
ER -
CSL-JSON
{
"id": "10.1126/
"type": "article-journal",
"title": "Neuronal YTHDF2 suppresses innate immune activation in Aβ pathology by promoting m&
"container-title": "Science advances",
"author": [
{
"family": "Pan",
"given": "Wenqi"
},
{
"family": "Yang",
"given": "Lin"
},
{
"family": "Zhang",
"given": "Yao"
},
{
"family": "Chen",
"given": "Yan"
},
{
"family": "Xu",
"given": "Yuesi"
},
{
"family": "Li",
"given": "Yifan"
},
{
"family": "Fu",
"given": "Yujie"
},
{
"family": "Ma",
"given": "Chunhui"
},
{
"family": "Liu",
"given": "Chunying"
},
{
"family": "Li",
"given": "Qing"
},
{
"family": "Liu",
"given": "Hailong"
},
{
"family": "Wang",
"given": "Hailin"
},
{
"family": "Xu",
"given": "Qi"
},
{
"family": "Tong",
"given": "Wei-Min"
},
{
"family": "Niu",
"given": "Yamei"
}
],
"container-title-short":
"volume": "12",
"issue": "25",
"page": "eadz0887",
"DOI": "10.1126/
"PMID": "42319929",
"PMCID": "PMC13281811",
"ISSN": "2375-2548",
"publisher": "American Association for the Advancement of Science",
"URL": "https://
"language": "en",
"issued": {
"date-parts": [
[
2026,
6,
19
]
]
}
}
Similar papers
The papers with a page that share the most with this one: the tools found in their code, their categories, datasets, cited references and authors, the rarest counting most.
- [1] doi:10.1038/s41467-026-76161-8
- The m⁶A reader YTHDF2 regulates mRNA transport and axon outgrowth in developing neurons.Journal: Nature communicationsIn common: mouse, 12 references
- [2] doi:10.1038/s41531-026-01362-3
- The epitranscriptomic m6A RNA modification modulates the synapse in ageing and in a mouse model of synucleinopathy.Journal: NPJ Parkinson's diseaseIn common: mouse, cellular / molecular, 11 references
- [3] doi:10.1371/journal.pcbi.1014573 [code]
- Cell-type-specific m1A dynamics are associated with microglial phenotypic transition and neuronal metabolic adaptation during spinal cord injury.Journal: PLoS computational biologyIn common: mouse, cellular / molecular, 4 references
- [4] doi:10.1093/nar/gkag544 [code]
- Single-base resolution atlas reveals moderate conservation and regulatory diversity of m6A modifications across mammals.Journal: Nucleic acids researchIn common: 4 references
- [5] doi:10.1111/acel.70616
- Transcriptomic Evidence of Mitochondrial Double-Stranded RNA Accumulation in Brain Aging and Alzheimer's Disease.Journal: Aging cellIn common: Alzheimer's / dementia, cellular / molecular, 3 references
- [6] doi:10.1038/s41467-026-74037-5
- Microglial CD31 suppresses Aβ clearance and promotes Alzheimer pathology in 5×FAD mice.Journal: Nature communicationsIn common: Alzheimer's / dementia, mouse, cellular / molecular, 3 references
- [7] doi:10.1038/s44400-026-00125-4 [code]
- Regulators of interferon-responsive microglia uncovered by Genome-wide CRISPRi screening.Journal: NPJ dementiaIn common: Alzheimer's / dementia, cellular / molecular, 3 references
- [8] doi:10.1038/s41467-026-73538-7
- Pathogenic variants in the autophagy-tethering factor EPG5 drive neurodegeneration through mitochondrial dysfunction and innate immune activation.Journal: Nature communicationsIn common: cellular / molecular, 3 references
- [9] doi:10.1038/s41467-026-74104-x [code]
- TNF-α induces type I IFN signalling to suppress neurogenesis and recruit T cells.Journal: Nature communicationsIn common: 3 references
- [10] doi:10.1002/alz.71680
- A combined artificial intelligence-wet lab approach identifies a pivotal role of the NAD&
lt;sup& gt;+& lt;/ sup& gt;-mitophagy axis on aging and neurodegeneration. Journal: Alzheimer's & dementia : the journal of the Alzheimer's AssociationIn common: Alzheimer's / dementia, cellular / molecular, 2 references
Contribute
The authors of this paper can claim it, correct its record and validate its tracing map, and the maintainers of its code (its owner, or a public member of its organization) correct what it says of their repository; anyone signed in can ask for its removal. Every request goes to OSCR's own machine, which answers it; your account page follows them.
Sign in with ORCID to claim this paper as one of its authors, correct its record or validate its tracing map: when the paper's metadata lists your ORCID iD, you are recognized at once. Maintainers of its code: sign in with GitHub, then claim the repository on your account page.
Claim this paper
Correct its record
Say what each link of this record is, remove the ones that are not the paper's, add the ones that are missing. The correction becomes a new version of the record, in its Versions section.
Request its removal
To ask OSCR to remove this record, the copies of its authors' scripts or its tracing map, use the removal request page: signed in, you say who you are, what to remove and why, then review and confirm the request. Published rules decide every request (how).
Discussion, reproductions, activity
Discussion: questions and error reports about this paper and its code, from signed-in readers and its authors. It opens with sign-in.
Reproductions: reports from readers who ran the authors' code: what they reproduced, with which environment, commit and data. It opens with sign-in.
Activity: what happens around this paper: new versions of its record, its map's validation, discussions and reproductions. It opens with sign-in.
