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Integrative bibliometric and transcriptomic analyses identify selenium-associated molecular signatures in the aging brain.

Overview

Authors: Shan Liu1,2, Bo Yan3, Han Gao1,2, Lin Zhang1, Zihan Zhang4, Yaru Liu1,2, Fanglian Chen2, Ping Lei1,2
  1. Department of Geriatrics, Tianjin Medical University General Hospital, Tianjin, China
  2. Key Laboratory of Post-Trauma Neuro-Repair and Regeneration in Central Nervous System, Ministry of Education, Tianjin Key Laboratory of Injuries, Variations and Regeneration of Nervous System, Tianjin Neurological Institute, Tianjin Medical University General Hospital, Tianjin, China
  3. Department of Gastroenterology, The Central Hospital of Enshi Tujia and Miao Autonomous Prefecture, Enshi, China
  4. School of Medicine, Nankai University, Tianjin, China
Journal: Frontiers in aging neuroscience, volume 18, article 1791352
Dates: received 19 January 2026; accepted 31 March 2026; published online 4 May 2026
Type: Research article · Language: English
License: CC BY
Identifiers: DOI 10.3389/fnagi.2026.1791352 · PMID 42157858 · PMCID PMC13180909 · OpenAlex W7160167870
Open access: gold, a free copy (OpenAlex)
Status: data only
Categories: genetics / omics (modality), mouse (organism), cellular / molecular (subfield)
Methods: Machine learning, Statistics, Connectivity, Smoothing, state filtering, decompositions
Keywords: bibliometrics, brain aging, machine learning, selenoproteins, SEPHS2, SP1
Topic: Selenium in Biological Systems (Nutrition and Dietetics, Nursing), according to OpenAlex
Citations: not cited yet (Europe PMC); 51 references in the paper

Abstract

Background and purpose: The aging brain is particularly sensitive to alterations in selenium status. Selenium deficiency has been associated with impaired neural function, cognitive decline, and increased vulnerability to neurodegeneration. However, the molecular mechanisms that link selenium biology to brain aging remain poorly understood.

Methods: We conducted a bibliometric analysis of 1,826 publications and identified brain-aging DEGs from public datasets. After intersecting these with selenium-related gene sets, we used machine-learning feature selection and SHAP/nomogram evaluation to prioritize core genes, validated findings in an independent cohort, performed immune-infiltration and gene-drug enrichment analyses, and confirmed age-related transcriptional and protein changes in mouse brain tissue.

Results: Bibliometric analysis showed a steady increase in publications on selenium and aging over the past two decades, with major research hotspots focusing on oxidative stress, selenoproteins, and cognitive function, while the selenium-cognition relationship remains relatively underexplored. Intersection analysis identified seven potential targets linking selenium to brain aging, from which machine-learning feature selection prioritized three core genes (SP1, SEPHS2, and MSRB1) that were significantly differentially expressed in aged samples. SHAP and nomogram analyses indicated that SP1 and SEPHS2 were the main contributors to model discrimination. Animal experiments further confirmed increased SP1 and decreased SEPHS2 expression at both mRNA and protein levels in aged mouse brains, consistent with the bioinformatic findings.

Conclusion: This study identifies SP1 and SEPHS2 as key genes linking selenium to brain aging, providing new insights into the role of selenium in brain aging and suggesting that these genes may represent potential biomarkers or therapeutic targets for brain aging and aging-related brain disorders.

Reproduced under the paper's license (CC BY), from the paper cited above.

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Data

Data links

Data availability statement

The datasets presented in this study can be found in online repositories. The repository name and accession numbers are as follows: Gene Expression Omnibus (GEO), https://www.ncbi.nlm.nih.gov/geo/, GSE53890; GSE1572.

Reproduced under the paper's license (CC BY), from the paper cited above.

Versions

The history of this record: each version stored by the harvester or made by a correction of its authors or of the maintainers of its code, and what changed in its facts. The texts of the paper (its abstract, its availability statements) are not part of it; versions that changed only those are not listed.

Version 1, 28 September 2026: the first record

Recorded: type, language, journal, volume, pages, dates, 8 authors, 6 keywords, 51 references.

Cite

This paper

Liu, S., Yan, B., Gao, H., Zhang, L., Zhang, Z., Liu, Y., Chen, F., & Lei, P. (2026). Integrative bibliometric and transcriptomic analyses identify selenium-associated molecular signatures in the aging brain. Frontiers in aging neuroscience, 18, 1791352. https://doi.org/10.3389/fnagi.2026.1791352

BibTeX

@article{liu2026integrative,
author = {Liu, Shan and Yan, Bo and Gao, Han and Zhang, Lin and Zhang, Zihan and Liu, Yaru and Chen, Fanglian and Lei, Ping},
title = {{Integrative bibliometric and transcriptomic analyses identify selenium-associated molecular signatures in the aging brain}},
journal = {Frontiers in aging neuroscience},
year = {2026},
month = may,
volume = {18},
pages = {1791352},
publisher = {Frontiers Media SA},
issn = {1663-4365},
doi = {10.3389/fnagi.2026.1791352},
url = {https://doi.org/10.3389/fnagi.2026.1791352},
pmid = {42157858},
pmcid = {PMC13180909}
}

RIS

TY - JOUR
AU - Liu, Shan
AU - Yan, Bo
AU - Gao, Han
AU - Zhang, Lin
AU - Zhang, Zihan
AU - Liu, Yaru
AU - Chen, Fanglian
AU - Lei, Ping
TI - Integrative bibliometric and transcriptomic analyses identify selenium-associated molecular signatures in the aging brain
T2 - Frontiers in aging neuroscience
J2 - Front Aging Neurosci
PY - 2026
DA - 2026/05/04
VL - 18
SP - 1791352
SN - 1663-4365
PB - Frontiers Media SA
DO - 10.3389/fnagi.2026.1791352
UR - https://doi.org/10.3389/fnagi.2026.1791352
LA - en
ER -

CSL-JSON

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