Integrative bibliometric and transcriptomic analyses identify selenium-associated molecular signatures in the aging brain.
Overview
- Department of Geriatrics, Tianjin Medical University General Hospital, Tianjin, China
- Key Laboratory of Post-Trauma Neuro-Repair and Regeneration in Central Nervous System, Ministry of Education, Tianjin Key Laboratory of Injuries, Variations and Regeneration of Nervous System, Tianjin Neurological Institute, Tianjin Medical University General Hospital, Tianjin, China
- Department of Gastroenterology, The Central Hospital of Enshi Tujia and Miao Autonomous Prefecture, Enshi, China
- School of Medicine, Nankai University, Tianjin, China
Abstract
Background and purpose: The aging brain is particularly sensitive to alterations in selenium status. Selenium deficiency has been associated with impaired neural function, cognitive decline, and increased vulnerability to neurodegeneration. However, the molecular mechanisms that link selenium biology to brain aging remain poorly understood.
Methods: We conducted a bibliometric analysis of 1,826 publications and identified brain-aging DEGs from public datasets. After intersecting these with selenium-related gene sets, we used machine-learning feature selection and SHAP/
Results: Bibliometric analysis showed a steady increase in publications on selenium and aging over the past two decades, with major research hotspots focusing on oxidative stress, selenoproteins, and cognitive function, while the selenium-cognition relationship remains relatively underexplored. Intersection analysis identified seven potential targets linking selenium to brain aging, from which machine-learning feature selection prioritized three core genes (SP1, SEPHS2, and MSRB1) that were significantly differentially expressed in aged samples. SHAP and nomogram analyses indicated that SP1 and SEPHS2 were the main contributors to model discrimination. Animal experiments further confirmed increased SP1 and decreased SEPHS2 expression at both mRNA and protein levels in aged mouse brains, consistent with the bioinformatic findings.
Conclusion: This study identifies SP1 and SEPHS2 as key genes linking selenium to brain aging, providing new insights into the role of selenium in brain aging and suggesting that these genes may represent potential biomarkers or therapeutic targets for brain aging and aging-related brain disorders.
Reproduced under the paper's license (CC BY), from the paper cited above.
Code
The paper links to its data, not to its authors' code: see the Data section.
Tracing map
A tracing map links a paper to the code its authors published: this paper has none, so it has no map.
Data
Data links
- ncbi.nlm.nih.gov/
geo , NCBI; found in “Data availability statement”
Data availability statement
The datasets presented in this study can be found in online repositories. The repository name and accession numbers are as follows: Gene Expression Omnibus (GEO), https://
Reproduced under the paper's license (CC BY), from the paper cited above.
Versions
The history of this record: each version stored by the harvester or made by a correction of its authors or of the maintainers of its code, and what changed in its facts. The texts of the paper (its abstract, its availability statements) are not part of it; versions that changed only those are not listed.
Version 1, 28 September 2026: the first record
Recorded: type, language, journal, volume, pages, dates, 8 authors, 6 keywords, 51 references.
Cite
This paper
Liu, S., Yan, B., Gao, H., Zhang, L., Zhang, Z., Liu, Y., Chen, F., & Lei, P. (2026). Integrative bibliometric and transcriptomic analyses identify selenium-associated molecular signatures in the aging brain. Frontiers in aging neuroscience, 18, 1791352. https://
BibTeX
@article{liu2026integrat
author = {Liu, Shan and Yan, Bo and Gao, Han and Zhang, Lin and Zhang, Zihan and Liu, Yaru and Chen, Fanglian and Lei, Ping},
title = {{Integrative bibliometric and transcriptomic analyses identify selenium-associated molecular signatures in the aging brain}},
journal = {Frontiers in aging neuroscience},
year = {2026},
month = may,
volume = {18},
pages = {1791352},
publisher = {Frontiers Media SA},
issn = {1663-4365},
doi = {10.3389/
url = {https://
pmid = {42157858},
pmcid = {PMC13180909}
}
RIS
TY - JOUR
AU - Liu, Shan
AU - Yan, Bo
AU - Gao, Han
AU - Zhang, Lin
AU - Zhang, Zihan
AU - Liu, Yaru
AU - Chen, Fanglian
AU - Lei, Ping
TI - Integrative bibliometric and transcriptomic analyses identify selenium-associated molecular signatures in the aging brain
T2 - Frontiers in aging neuroscience
J2 - Front Aging Neurosci
PY - 2026
DA - 2026/
VL - 18
SP - 1791352
SN - 1663-4365
PB - Frontiers Media SA
DO - 10.3389/
UR - https://
LA - en
ER -
CSL-JSON
{
"id": "10.3389/
"type": "article-journal",
"title": "Integrative bibliometric and transcriptomic analyses identify selenium-associated molecular signatures in the aging brain",
"container-title": "Frontiers in aging neuroscience",
"author": [
{
"family": "Liu",
"given": "Shan"
},
{
"family": "Yan",
"given": "Bo"
},
{
"family": "Gao",
"given": "Han"
},
{
"family": "Zhang",
"given": "Lin"
},
{
"family": "Zhang",
"given": "Zihan"
},
{
"family": "Liu",
"given": "Yaru"
},
{
"family": "Chen",
"given": "Fanglian"
},
{
"family": "Lei",
"given": "Ping"
}
],
"container-title-short":
"volume": "18",
"page": "1791352",
"DOI": "10.3389/
"PMID": "42157858",
"PMCID": "PMC13180909",
"ISSN": "1663-4365",
"publisher": "Frontiers Media SA",
"URL": "https://
"language": "en",
"issued": {
"date-parts": [
[
2026,
5,
4
]
]
}
}
Similar papers
The papers with a page that share the most with this one: the tools found in their code, their categories, datasets, cited references and authors, the rarest counting most.
- [1] doi:10.1111/acel.70459
- Differential Gene Expression in Human Hippocampus With Aging.Journal: Aging cellIn common: genetics / omics, cellular / molecular, 2 references
- [2] doi:10.1186/s12929-026-01246-x
- Phosphatidylinositol transfer protein-1 integrates insulin/
IGF-1 and TOR signaling to negatively regulate lifespan and healthspan in Caenorhabditis elegans. Journal: Journal of biomedical scienceIn common: cellular / molecular, 2 references - [3] doi:10.1186/s10020-026-01450-3 [code]
- LPS-induced inflammation differentially affects endogenous Ca&
lt;sup& gt;2& lt;/ sup& gt;⁺ activity in mouse and human iPSC-derived astrocytes. Journal: Molecular medicine (Cambridge, Mass.)In common: mouse, cellular / molecular, 1 reference - [4] doi:10.1002/cns.71021
- Multilayer Proteome and Metabolome-Based Validation Uncovers Combined Regulatory Roles and Predictive Values of 6 RNA Modifications and Cellular Senescence in Alzheimer's Disease.Journal: CNS neuroscience & therapeuticsIn common: genetics / omics, cellular / molecular, 1 reference
- [5] doi:10.1093/brain/awag033
- Impairment of hippocampal gamma oscillations, mitochondria and neurovascular function in CADASIL.Journal: Brain : a journal of neurologyIn common: genetics / omics, mouse, cellular / molecular, 1 reference
- [6] doi:10.3892/mmr.2026.13967
- Sedanolide alleviates LPS‑induced depressive‑like behaviors by modulating the C3a/
C3aR signaling axis and microglial glycolysis. Journal: Molecular medicine reportsIn common: genetics / omics, mouse, cellular / molecular, 1 reference - [7] doi:10.3389/fimmu.2026.1775662
- &
lt;i& gt;Blomia tropicalis& lt;/ i& gt; allergens induce lung DNA methylation changes in neuroimmune genes in a mouse model of airway inflammation. Journal: Frontiers in immunologyIn common: genetics / omics, mouse, cellular / molecular, 1 reference - [8] doi:10.3892/ijmm.2026.5865
- Endothelial NOX4‑driven oxidative stress inhibition reverses HtrA1 deficiency‑induced blood‑brain barrier disruption and cognitive impairment.Journal: International journal of molecular medicineIn common: genetics / omics, mouse, cellular / molecular, 1 reference
- [9] doi:10.3389/fbinf.2026.1858866 [code]
- Comparative evaluation of reference-free transcriptomic deconvolution highlights the importance of biological validation in astrocytes across Alzheimer's disease.Journal: Frontiers in bioinformaticsIn common: genetics / omics, cellular / molecular, 1 reference
- [10] doi:10.3390/biom16070992
- Molecular Networks and Key Regulators Underlying Resilience of the Human Brain to Aging and Dementia.Journal: BiomoleculesIn common: genetics / omics, cellular / molecular, 1 reference
Contribute
The authors of this paper can claim it, correct its record and validate its tracing map, and the maintainers of its code (its owner, or a public member of its organization) correct what it says of their repository; anyone signed in can ask for its removal. Every request goes to OSCR's own machine, which answers it; your account page follows them.
Sign in with ORCID to claim this paper as one of its authors, correct its record or validate its tracing map: when the paper's metadata lists your ORCID iD, you are recognized at once. Maintainers of its code: sign in with GitHub, then claim the repository on your account page.
Claim this paper
Correct its record
Say what each link of this record is, remove the ones that are not the paper's, add the ones that are missing. The correction becomes a new version of the record, in its Versions section.
Request its removal
To ask OSCR to remove this record, the copies of its authors' scripts or its tracing map, use the removal request page: signed in, you say who you are, what to remove and why, then review and confirm the request. Published rules decide every request (how).
Discussion, reproductions, activity
Discussion: questions and error reports about this paper and its code, from signed-in readers and its authors. It opens with sign-in.
Reproductions: reports from readers who ran the authors' code: what they reproduced, with which environment, commit and data. It opens with sign-in.
Activity: what happens around this paper: new versions of its record, its map's validation, discussions and reproductions. It opens with sign-in.
