Every paper, by date: page 28

44,644 papers with a page: 24,189 with their authors' code, 4,955 with code on request, 15,495 with data only. The most recent first, 224 a page. Page 28 of 200: 19 March 2026 to 13 March 2026.

Thursday, 19 March 2026 (39 papers, 18 on this page)

[6049] doi:10.1038/s42003-026-09864-9 [paper, repository]

Microglia cause HIV-induced transcriptional and metabolic changes in human neural organoids.

Journal: Communications biology

Authors' code: SystemsVirology/HIV_Reservoir_Omics (no license)

Status: dead link

[6050] doi:10.1038/s42003-026-09866-7 [paper, repository]

Transcriptional and functional profiles of muscarinic receptor-expressing neurons in primate lateral prefrontal and anterior cingulate cortices.

Journal: Communications biology

Authors' code: campbio-manuscripts/Muscarinic_snRNAseq_ePhys (no license)

Status: code verified, 5 files readable, 4 matches

[6051] doi:10.1073/pnas.2517886123 [paper, data]

The cross-linking activity of transglutaminase 2 drives α-Synuclein pathology in synucleinopathy models.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Status: data only, 1 dataset cited

[6052] doi:10.1073/pnas.2525051123 [paper, repository]

Autogenic spinal excitatory circuit ensures skilled hand movements in primates.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: Zenodo 18229897 (CC-BY-4.0), Zenodo 18229898 (CC-BY-4.0), animalmodel/kim_pnas_2026 (no license)

Status: code verified, 27 files readable, 2 matches

[6053] doi:10.1162/imag.a.1167 [paper, repository]

The latent organization of white matter microstructure and its relation to fluid intelligence.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: OSF nhxcg (no license)

Status: code verified, 15 files readable, 4 matches

[6054] doi:10.1162/imag.a.1173 [paper, repository]

Imaging intravoxel vessel size distribution in the brain using susceptibility contrast enhanced MRI.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: iguha94/VSD_Pipeline (no license)

Status: code verified, 5 files readable, 3 matches

[6055] doi:10.1162/nol.a.231 [paper, repository]

Object Naming After Thalamic Damage: Evidence From a Large-Scale, Chronic-Phase Study of Left Hemisphere Stroke Survivors.

Journal: Neurobiology of language (Cambridge, Mass.)

Authors' code: OSF 8ct5p (no license)

Status: code verified, 3 files readable, 2 matches

[6056] doi:10.1186/s12944-026-02930-5 [paper, repository]

Plasma complex lipids in relation to cortical thickness and brain volumes: results from the population-based Rhineland study.

Journal: Lipids in health and disease

Authors' code: EN-Landstra/Plasma-Lipids-And-Brain (no license)

Status: code verified, 8 files readable

[6057] doi:10.1186/s12974-026-03774-7 [paper, data]

Obesity supersizes macrophage and neutrophil activation after stroke while lipid droplets play a protective role.

Journal: Journal of neuroinflammation

Status: data only, 1 dataset cited

[6058] doi:10.1186/s13041-026-01291-5 [paper, data]

Central nervous system pericytes express soluble ST2 in inflammation and injury.

Journal: Molecular brain

Status: data only, 1 dataset cited

[6059] doi:10.1186/s13041-026-01292-4 [paper, data]

Neuro-immune interactions underlying autoimmune diseases: insights from brain imaging data.

Journal: Molecular brain

Status: data only, 1 dataset cited

[6060] doi:10.1371/journal.pgen.1011962 [paper, data]

A scaffold attachment factor PHM-2 regulates synaptic transmission through SLO-2 potassium channel in C. elegans.

Journal: PLoS genetics

Status: data only, 1 dataset cited

[6061] doi:10.1371/journal.pone.0341545 [paper, repository]

Modeling and benchmarking quantum optical neurons for efficient neural computation.

Journal: PloS one

Authors' code: zalandoresearch/fashion-mnist (MIT)

Status: code verified, 14 files readable

[6062] doi:10.3389/fgene.2026.1780231 [paper, data]

<i>PDK4</i> as a metabolic biomarker of chronic hydrocephalus.

Journal: Frontiers in genetics

Status: data only, 1 dataset cited

[6063] doi:10.3389/fimmu.2026.1731068 [paper, data]

A conserved monocyte activation program links brain injury to systemic immune adaptation and clinical outcomes.

Journal: Frontiers in immunology

Status: data only, 2 datasets cited

[6064] doi:10.3390/ijms27062775 [paper, data]

Stage-Associated Cellular and Molecular Signatures in Diabetic Retinopathy Identified Through Integrated Bulk and Single-Cell Transcriptomic Analysis.

Journal: International journal of molecular sciences

Status: data only, 1 dataset cited

[6065] doi:10.64898/2026.03.16.711194 [paper]

Female-enriched <i>Eggerthella lenta</i> drives neuroinflammation and IFN-γ via host receptor TLR2

Journal: bioRxiv (preprint)

Status: code on request

[6066] doi:10.7759/cureus.105487 [paper, repository]

A Systematic Review of Native Languages Mapped With Direct Electrical Stimulation During Awake Craniotomy.

Journal: Cureus

Authors' code: OSF awhcn (no license)

Status: empty repository

Wednesday, 18 March 2026 (47 papers)

[6067] doi:10.1002/1878-0261.70233 [paper, data]

Deciphering transcriptional plasticity in pancreatic ductal adenocarcinoma reveals alterations in sensory neuron innervation.

Journal: Molecular oncology

Status: data only, 1 dataset cited

[6068] doi:10.1002/advs.202517862 [paper, data]

Intracellular Aβ42 Sequestration by a Serine Protease Mitigates Neurotoxicity in a Drosophila Alzheimer's Disease Model.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Status: code on request, 1 dataset cited

[6069] doi:10.1007/s10863-026-10094-1 [paper, data]

PTGS2 as a potential target for apigenin to promote spinal cord injury repair.

Journal: Journal of bioenergetics and biomembranes

Status: data only, 1 dataset cited

[6070] doi:10.1016/j.celrep.2026.117116 [paper, repository]

GIP receptor agonism suppresses inflammation-induced aversion and food intake via distinct circuits.

Journal: Cell reports

Authors' code: nikhayes/fibphoflow (MIT)

Status: code verified, 5 files readable

[6071] doi:10.1016/j.isci.2026.115342 [paper]

Regulatory role of GLUT1 in lead-induced neurotoxicity and the neuroprotective effect of &lt;i&gt;Morinda officinalis&lt;/i&gt; oligosaccharides.

Journal: iScience

Status: code on request

[6072] doi:10.1016/j.isci.2026.115406 [paper, data]

Microbiome-derived metabolites alleviate chronic pain in a reserpine-induced model of fibromyalgia.

Journal: iScience

Status: code on request, 1 dataset cited

[6073] doi:10.1016/j.xpro.2026.104445 [paper]

Protocol for intra-nerve AAV injection and dorsal root potential recording for optogenetic modulation of the peripheral sensory nerve activity.

Journal: STAR protocols

Status: code on request

[6074] doi:10.1038/s41467-026-69856-5 [paper, repository]

Celcomen: spatial causal disentanglement for single-cell and tissue perturbation modeling.

Journal: Nature communications

Authors' code: Teichlab/celcomen (GPL-3.0), stathismegas/celcomen_reproducibility (no license), Zenodo 17877584 (GPL-3.0), Zenodo 17877629 (CC-BY-4.0)

Status: code verified, 52 files readable, 9 matches

[6075] doi:10.1038/s41467-026-70099-7 [paper, repository]

Olfactory cleft biopsy analysis of Alzheimer's disease pathobiology across disease stages.

Journal: Nature communications

Authors' code: Zenodo 18599804 (CC-BY-4.0), goldstein-lab/alzheimers-olfactory-biopsy-analysis (no license)

Status: code verified, 16 files readable, 16 matches

[6076] doi:10.1038/s41467-026-70353-y [paper, repository]

Motor cortex somatostatin interneurons adaptively shape the structure of action sequences.

Journal: Nature communications

Authors' code: Jeongoenlee/SST (no license)

Status: empty repository, 1 file readable

[6077] doi:10.1038/s41467-026-70522-z [paper, data]

Intellectual disability-causing mutations in KIF11 impair microtubule dynamics and dendritic arborization.

Journal: Nature communications

Status: data only, 2 datasets cited

[6078] doi:10.1038/s41467-026-70658-y [paper, repository]

Rapid dynamics of dorsal raphe serotonin neurons regulate the strength of visual attention.

Journal: Nature communications

Authors' code: Swamylab/Lehnert_et_al_5HTAttention (no license)

Status: code verified, 21 files readable, 2 matches

[6079] doi:10.1038/s41467-026-70759-8 [paper, data]

Molecular mechanism of menthol-induced TRPV5 channel inhibition.

Journal: Nature communications

Status: data only, 4 datasets cited

[6080] doi:10.1038/s41467-026-70837-x [paper, data]

Proton channels govern vesicular carbonate chemistry in mineralizing cells of a marine calcifier.

Journal: Nature communications

Status: data only, 2 datasets cited

[6081] doi:10.1038/s41586-026-10226-y [paper, repository]

Adaptive evolution of gene regulatory networks in mammalian neocortex.

Journal: Nature

Authors' code: bxlab/bx-python (MIT)

Status: code verified, 241 files readable

[6082] doi:10.1038/s41590-026-02457-y [paper, repository]

Distinct origins and niches determine the cellular responsiveness of CNS macrophages after repopulation.

Journal: Nature immunology

Authors' code: fliegaufm/Repopulation_of_CAMs (no license)

Status: empty repository, 1 file readable

[6083] doi:10.1038/s41598-026-39465-9 [paper]

Associations between ventricular boundary shift integral and composite cognitive domains across the alzheimer's disease continuum.

Journal: Scientific reports

Status: code on request

[6084] doi:10.1038/s41598-026-42663-0 [paper, repository]

Nonlinear dynamics of seizure suppression via optogenetic modulation of neuron-astrocyte interaction.

Journal: Scientific reports

Authors' code: ameriabazar/Computational-Modeling-of-Dual-Optogenetic-Seizure-Control-in-Neuron-Astrocyte-Networks (no license)

Status: code verified, 1 file readable

[6085] doi:10.1038/s41598-026-44040-3 [paper, data]

Ensuring the integrity of AI models: a blockchain-based approach for protecting medical imaging training data.

Journal: Scientific reports

Status: data only, 1 dataset cited

[6086] doi:10.1038/s41598-026-44374-y [paper, data]

WMambaFuse: an infrared and visible image fusion network based on wavelet mamba.

Journal: Scientific reports

Status: data only, 3 datasets cited

[6087] doi:10.1038/s41598-026-44536-y [paper, data]

PSD-LW-DCN: a generalizable power spectral density based lightweight deep convolutional neural network for seizure detection.

Journal: Scientific reports

Status: data only, 2 datasets cited

[6088] doi:10.1038/s42003-026-09848-9 [paper, data]

Simulated closed-loop magnetic stimulation promotes function recovery and axonal regeneration in spinal cord injury.

Journal: Communications biology

Status: data only, 2 datasets cited

[6089] doi:10.1038/s43856-025-01279-7 [paper, data]

Surface-engineered dual drug-loaded tumor-targeted liposomal nanoparticles to overcome the therapeutic resistance in glioblastoma multiforme.

Journal: Communications medicine

Status: data only, 1 dataset cited

[6090] doi:10.1073/pnas.2510731123 [paper, repository]

Sleep alters neurovascular and hydrodynamic coupling in the human brain.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: TommiVayrynen/Sleep-Alters-Neurovascular-and-Hydrodynamic-Coupling-in-the-Human-Brain (MIT)

Status: code verified, 9 files readable

[6091] doi:10.1073/pnas.2518294123 [paper, repository]

Mild SARS-CoV-2 maternal infection in mice induces transient offspring neurodevelopmental aberrance.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: caihelen/covid-pregnancy (no license)

Status: code verified, 12 files readable, 7 matches

[6092] doi:10.1073/pnas.2527163123 [paper, data]

A transcription regulator atlas identifies TOX3 as an Atoh1 coactivator in cerebellar development and tumorigenesis.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Status: data only, 1 dataset cited

[6093] doi:10.1073/pnas.2531595123 [paper, data]

Fetal developmental trajectories following maternal immune activation are shaped by sex chromosome-gonadal interactions.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Status: data only, 1 dataset cited

[6094] doi:10.1093/braincomms/fcag099 [paper, repository]

Association of structural brain changes with cognitive deficits and fatigue in patients with post-COVID-19 condition.

Journal: Brain communications

Authors' code: OSF aym9e (no license)

Status: code verified, 3 files readable, 6 matches

[6095] doi:10.1126/sciadv.adz3075 [paper, repository]

Evidence for chronological diversification of spinal neuron subtypes by a shared sequence of transcription factors.

Journal: Science advances

Authors' code: doi:10.5061/dryad.j3tx95xtz (no license), Zenodo 18806591 (MIT)

Status: code verified, 2 files readable, 14 matches

[6096] doi:10.1186/s10194-026-02329-8 [paper, repository]

Prefrontal dysregulation of interoceptive and emotional processing in episodic migraine: a task-based fMRI study.

Journal: The journal of headache and pain

Authors' code: cmrr-c2p/mb (MIT)

Status: code verified, 4 files readable

[6097] doi:10.1186/s10194-026-02335-w [paper, data]

The medial orbitofrontal cortex mediates neuropathic pain and anxiodepressive-like behaviors via two distinct pathways.

Journal: The journal of headache and pain

Status: data only, 1 dataset cited

[6098] doi:10.1186/s11689-026-09685-1 [paper, repository]

Beta power as a neural correlate of sensory features in autistic individuals.

Journal: Journal of neurodevelopmental disorders

Authors' code: juliechaudet/PSD-Analysis-EEG-HR (no license)

Status: code verified, 1 file readable, 4 matches

[6099] doi:10.1186/s12951-026-04180-0 [paper, data]

Targeting the oxidative microenvironment with a tannic acid-modified manganese dioxide nanozyme loaded with Honokiol nanoplatform to activate sirtuin 3-mediated deacetylation for alleviating cerebral ischemia-reperfusion injury.

Journal: Journal of nanobiotechnology

Status: data only, 1 dataset cited

[6100] doi:10.1186/s13024-026-00938-0 [paper, repository]

Inflammatory signaling differentially changes chromatin accessibility and gene expression of the PD- associated kinase LRRK2 between human and mice.

Journal: Molecular neurodegeneration

Authors' code: neurogenetics/LRRK2_IFN_iMicroglia_Human_Mouse (no license)

Status: code verified, 7 files readable, 7 matches

[6101] doi:10.1371/journal.pone.0344290 [paper, repository]

Effect of rhythmic auditory stimulation (RAS)® with and without melody on Parkinson's disease (PD) patients with deep brain stimulation (DBS): A study protocol.

Journal: PloS one

Authors' code: neuromodulation/perceive (Apache-2.0)

Status: code verified, 87 files readable, 1 match

[6102] doi:10.1523/jneurosci.0271-25.2026 [paper, repository]

Controlled Retrieval Relies on Directed Interactions between Semantic Control Regions and Visual Cortex: MEG Evidence from Oscillatory Dynamics.

Journal: The Journal of neuroscience : the official journal of the Society for Neuroscience

Authors' code: OSF j9pz4 (no license)

Status: code verified, 23 files readable, 6 matches

[6103] doi:10.1523/jneurosci.1548-25.2026 [paper, repository]

Human Beta Oscillations Reflect Magnitude and Fidelity of Priority Shifts in Working Memory.

Journal: The Journal of neuroscience : the official journal of the Society for Neuroscience

Authors' code: nemyers/Beta-Shifts-Working-Memory (MIT)

Status: code verified, 300 files readable, 15 matches

[6104] doi:10.3389/fnagi.2026.1731909 [paper, repository]

Ultra-fast MRI for brain-age prediction in a real-world cognitive disorders clinic.

Journal: Frontiers in aging neuroscience

Authors' code: rafaloz/BRAPIDD_BA (no license)

Status: code verified, 7 files readable, 5 matches

[6105] doi:10.3390/brainsci16030323 [paper, data]

Neuro-Transcriptomic Responses to Polypharmacological Agents in &lt;i&gt;Danio rerio&lt;/i&gt;: Implications for Translational Drug Repurposing in Neurodevelopmental Disorders.

Journal: Brain sciences

Status: data only, 1 dataset cited

[6106] doi:10.3390/ph19030502 [paper, repository]

Yixin Yangshen Granules Target HIF-1 Signaling to Modulate the Neuroimmune Microenvironment in Alzheimer's Disease: Insights from Integrative Multi-Omics and Deep Learning.

Journal: Pharmaceuticals (Basel, Switzerland)

Authors' code: CSUBioGroup/DTIAM (Apache-2.0)

Status: code verified, 21 files readable, 1 match

[6107] doi:10.64898/2026.03.16.712081 [paper, repository]

Sensory processing reallocation from external to internal signals in REM sleep

Journal: bioRxiv (preprint)

Authors' code: fcbg-platforms/eeg-cardio-audio-sleep (MIT)

Status: code verified, 47 files readable

[6108] doi:10.64898/2026.03.16.712103 [paper, repository]

Early microglial activation in the TME enables FLASH-RT to eradicate medulloblastoma while promoting neuron-astrocyte crosstalk to minimize toxicity in the hippocampus

Journal: bioRxiv (preprint)

Authors' code: gitlab.unige.ch/lirr/dsp-pediatric-mb (no license)

Status: code verified, 11 files readable, 1 match

[6109] doi:10.7554/elife.106981 [paper, repository]

Formation of task representations and replay in mouse medial prefrontal cortex.

Journal: eLife

Authors' code: HamedShabani/PFC_sequence_analysis (no license), Zenodo 10528244 (CC-BY-4.0)

Status: code verified, 208 files readable, 4 matches

[6110] doi:10.7554/elife.107663 [paper, repository]

Profiling presynaptic scaffolds using split-GFP reconstitution reveals cell-type-specific spatial configurations in the fly brain.

Journal: eLife

Authors' code: supp:PMC12999173/elife-107663-supp1.zip (no license), supp:PMC12999173/elife-107663-code1.zip (no license)

Status: code verified, 1 file readable, 1 match

[6111] doi:10.7554/elife.108319 [paper, repository]

iGABASnFR2 is an improved genetically encoded protein sensor of GABA.

Journal: eLife

Authors' code: Zenodo 17971100 (CC-BY-4.0)

Status: code verified, 14 files readable, 3 matches

[6112] doi:10.7554/elife.93067 [paper, repository]

Visual experience shapes functional connectivity between occipital and non-visual networks.

Journal: eLife

Authors' code: NPDL/Resting-state_dHCP (no license)

Status: code verified, 8 files readable, 3 matches

[6113] doi:10.7554/elife.98725 [paper, repository]

Functional connectivity-based attractor dynamics of the human brain in rest, task, and disease.

Journal: eLife

Authors' code: pni-lab/connattractor (GPL-3.0), spisakt/RPN-signature (BSD-3-Clause), pni-lab/PUMI (GPL-3.0)

Status: code verified, 190 files readable, 22 matches

Tuesday, 17 March 2026 (45 papers)

[6114] doi:10.1016/j.dcn.2026.101708 [paper, repository]

The functional foetal brain: A systematic review and meta-analysis.

Journal: Developmental cognitive neuroscience

Authors' code: OSF cxryf (no license)

Status: code verified, 1 file readable, 2 matches

[6115] doi:10.1016/j.isci.2026.115399 [paper, repository]

Molecular signatures of cell diversity modulated by long noncoding RNAs in the human fetal spinal cord.

Journal: iScience

Authors' code: omicsmart.com (no license), apanhui/hsa_scRNA_SpatialRNA (no license), almaan/stereoscope (MIT)

Status: code verified, 63 files readable, 2 matches

[6116] doi:10.1016/j.jshs.2026.101135 [paper, repository]

Effects of a year-long aerobic exercise intervention on neuroendocrine, autonomic, and neural correlates of stress, emotion, and cardiovascular disease risk in midlife adults.

Journal: Journal of sport and health science

Authors' code: OSF rpnbv (no license)

Status: empty repository

[6117] doi:10.1038/s41398-026-03923-9 [paper, repository]

Evaluating the potential of acupuncture for Alzheimer's disease treatment: A meta-analysis and systematic review of mouse model studies.

Journal: Translational psychiatry

Authors' code: HenryYang03/AutoExtract (no license), HenryYang03/Meta-Analysis (MIT)

Status: code verified, 27 files readable, 5 matches

[6118] doi:10.1038/s41398-026-03957-z [paper]

The role of the dorsal attention network in attention bias modification for social anxiety disorder.

Journal: Translational psychiatry

Status: code on request

[6119] doi:10.1038/s41467-026-69955-3 [paper, repository]

Bidirectional regulation of social memory by two distinct types of GABAergic neurons in the lateral septum.

Journal: Nature communications

Authors' code: mingrui-xu/lateral-septum-scRNA-seq-analysis (no license), lateral-septum-snRNA-seq-analysis (no license)

Status: code verified, 5 files readable, 2 matches

[6120] doi:10.1038/s41467-026-70047-5 [paper, repository]

Spatial transcriptomics uncovers vasculature-centered cellular interactions driving Japanese encephalitis progression in a mouse model.

Journal: Nature communications

Authors' code: aertslab/pyscenic (GPL-3.0)

Status: code verified, 48 files readable, 4 matches

[6121] doi:10.1038/s41467-026-70065-3 [paper, repository]

Local lateral connectivity is sufficient for replicating cortex-like topographical organization in deep neural networks.

Journal: Nature communications

Authors' code: pytorch/pytorch (BSD-3-Clause), neuroailab/TDANN (no license), BashivanLab/LLCNN (no license)

Status: code verified, 2,184 files readable, 3 matches

[6122] doi:10.1038/s41467-026-70267-9 [paper, repository]

Neural circuit models for evidence accumulation through choice-selective sequences.

Journal: Nature communications

Authors' code: lindseysbrown/evidence_accumulation_through_sequences (AGPL-3.0), Zenodo 18040040 (apgl-v3), Zenodo 5498992 (CC0-1.0)

Status: code verified, 518 files readable, 25 matches

[6123] doi:10.1038/s41467-026-70470-8 [paper, repository]

A blueprint for local and distal invasion programs in glioblastoma.

Journal: Nature communications

Authors' code: rchanoch/GBM_Invasion_script (no license)

Status: code verified, 1 file readable, 2 matches

[6124] doi:10.1038/s41467-026-70497-x [paper, repository]

Single-cell spatial map of cis-regulatory elements for disease-related genes in the macaque cortex.

Journal: Nature communications

Authors' code: bulik/ldsc (GPL-3.0), JuneMeng/snATAC_MacaqueCTX_Atlas (MIT), sunyk740/RMGE (MIT), Zenodo 18431761 (MIT), Zenodo 18432489 (MIT), Zenodo 18431762 (MIT)

Status: code verified, 126 files readable, 22 matches

[6125] doi:10.1038/s41467-026-70708-5 [paper, repository]

Common and distinct neurofunctional signatures of dynamic naturalistic emotion regulation strategies.

Journal: Nature communications

Authors' code: canlab (no license), h-psy/fmri_studies (GPL-3.0), Zenodo 18625297 (GPL-3.0)

Status: code verified, 12 files readable, 2 matches

[6126] doi:10.1038/s41467-026-70754-z [paper, repository]

An intralayer microcircuit in the temporal association cortex underlies sensory-induced escape in mice.

Journal: Nature communications

Authors' code: LiHe0606/Animal-speed-and-Neuron-firing-1-XiaoLab (no license)

Status: empty repository, 1 file readable

[6127] doi:10.1038/s41467-026-70755-y [paper, repository]

A shared speed encoding model for running and backing away behaviours in segregated neural circuits.

Journal: Nature communications

Authors' code: LiHe0606/Animal-speed-and-Neuron-firing-2-XiaoLab (no license)

Status: empty repository, 1 file readable

[6128] doi:10.1038/s41593-026-02236-w [paper, repository]

Organization of neuropeptide systems in the human brain.

Journal: Nature neuroscience

Authors' code: netneurolab/ceballos_neuropeptide-organization (BSD-3-Clause), rmarkello/abagen (BSD-3-Clause), chrisgorgo/alleninf (BSD-3-Clause), netneurolab/pypyls (GPL-2.0)

Status: code verified, 120 files readable, 13 matches

[6129] doi:10.1038/s41598-026-42868-3 [paper, repository]

Contrast enhancement for brain MRI images via genetic algorithm-based dual cut histogram equalization.

Journal: Scientific reports

Authors' code: iksanb/gadche (MIT)

Status: code verified, 3 files readable, 1 match

[6130] doi:10.1038/s41598-026-43707-1 [paper, repository]

Explainable artificial intelligence for early Alzheimer's diagnosis using enhanced grey relational features and multimodal data.

Journal: Scientific reports

Authors' code: wusatullah315/Enhanced-Grey-Relational-Features-and-Multimodal-Data. (no license)

Status: dead link

[6131] doi:10.1038/s41598-026-44499-0 [paper, data]

An attention-based multimodal deep learning framework integrating EEG and ECG for enhanced stress detection.

Journal: Scientific reports

Status: data only, 1 dataset cited

[6132] doi:10.1038/s41746-025-02279-6 [paper, repository]

AI-driven label-free Raman spectromics for intraoperative spinal tumor assessment.

Journal: NPJ digital medicine

Authors' code: DavidReineckeMD/SpineXtract (MIT)

Status: code verified, 14 files readable, 2 matches

[6133] doi:10.1038/s42003-026-09661-4 [paper, data]

Molecular resilience of neurons to repetitive mechanical compression.

Journal: Communications biology

Status: data only, 1 dataset cited

[6134] doi:10.1038/s42003-026-09825-2 [paper, repository]

Normative modeling of MEG brain oscillations across the human lifespan.

Journal: Communications biology

Authors' code: ML4PNP/MEG_Norm (GNU), ML4PNP/MEGaNorm (GPL-3.0), Zenodo 15441320 (GPL-3.0)

Status: code verified, 49 files readable, 27 matches

[6135] doi:10.1039/d5lc00971e [paper, repository]

Inkube: an all-in-one solution for neuron culturing, electrophysiology, and fluidic exchange.

Journal: Lab on a chip

Authors' code: maurer-lbb/inkube_software (GPL-3.0)

Status: code verified, 70 files readable, 4 matches

[6136] doi:10.1073/pnas.2505768123 [paper, repository]

Hierarchical whole-brain modeling of critical synchronization dynamics in the human brain.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: palvalab/hierarchical_kuramoto_zero (no license)

Status: code verified, 12 files readable, 5 matches

[6137] doi:10.1073/pnas.2521256123 [paper, data]

Microglial fructose metabolism is essential for glioblastoma growth.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Status: data only, 1 dataset cited

[6138] doi:10.1093/oons/kvag001 [paper, repository]

Universal and culture-tuned neural codes for vocal emotion: an fMRI MVPA study using Japanese and Canadian voices.

Journal: Oxford open neuroscience

Authors' code: OSF vb6yu (no license)

Status: code verified

[6139] doi:10.1159/000551466 [paper, data]

Cost Variability in Stereotactic Technique for Deep Brain Stimulation: A Single-Institution Retrospective Study.

Journal: Stereotactic and functional neurosurgery

Status: data only, 1 dataset cited

[6140] doi:10.1172/jci178630 [paper, data]

Sex and ovarian hormone cycles alter effects of stimulant drugs on mouse dopaminergic signaling.

Journal: The Journal of clinical investigation

Status: data only, 1 dataset cited

[6141] doi:10.1172/jci197010 [paper, repository]

l-2-Hydroxyglutarate impairs neuronal differentiation through epigenetic activation of MYC expression.

Journal: The Journal of clinical investigation

Authors' code: wencgu/nac (no license)

Status: code verified, 6 files readable

[6142] doi:10.1172/jci199056 [paper, data]

Symbiotic exclusivity between CLOCK and TFPI2 drives stemness and immunosuppression in glioblastoma models.

Journal: The Journal of clinical investigation

Status: data only, 1 dataset cited

[6143] doi:10.1186/s12885-026-15820-x [paper, data]

GPC2 provides prognostic value in pan-pediatric cancers and is associated with MYCN amplification in neuroblastoma: bioinformatics analysis and validation.

Journal: BMC cancer

Status: data only, 1 dataset cited

[6144] doi:10.1371/journal.pcbi.1013251 [paper, repository]

Learning, sleep replay and consolidation of contextual fear memories: A neural network model.

Journal: PLoS computational biology

Authors' code: Zenodo 15546751 (MIT), larswe/fear_memory_plos (MIT)

Status: code verified, 52 files readable, 9 matches

[6145] doi:10.1371/journal.pcbi.1014026 [paper, repository]

Separating random and deterministic sources of computational noise in explore-exploit decisions.

Journal: PLoS computational biology

Authors' code: wangxsiyu/Paper_PlosCB_2026_RandomDeterministicNoise (no license)

Status: code verified, 484 files readable, 1 match

[6146] doi:10.1523/eneuro.0300-25.2026 [paper, repository]

Short-Term Perceptual Training Modulates Neural Responses to Deepfake Speech But Does Not Improve Behavioral Discrimination.

Journal: eNeuro

Authors' code: OSF d9w8a (no license)

Status: code verified

[6147] doi:10.1523/eneuro.0340-25.2026 [paper, repository]

Building an Ecosystem of Seizure Localization Methods: Neural Fragility as the First Step.

Journal: eNeuro

Authors' code: jiefei-wang/tablecontainer (other), jiefei-wang/epoch (GPL-3.0), Jiefei-Wang/EZFragility (no license), cran.r-project.org/package=ezfragility (no license), cran.r-project.org/web/packages (no license)

Status: code verified, 53 files readable, 14 matches

[6148] doi:10.3344/kjp.25124 [paper, data]

Manipulation therapy alleviates neuropathic pain &lt;i&gt;via&lt;/i&gt; the SOCS1 m&lt;sup&gt;6&lt;/sup&gt;A epigenetic loop.

Journal: The Korean journal of pain

Status: data only, 1 dataset cited

[6149] doi:10.3389/fmed.2026.1788516 [paper, data]

TFFBN-HDLF: a hybrid deep learning framework based on time-frequency functional brain networks for epileptic seizure detection.

Journal: Frontiers in medicine

Status: data only, 2 datasets cited

[6150] doi:10.3389/fnins.2026.1780751 [paper, repository]

Computational modeling of spatiotemporal afterimage visual perception with spiking neural networks.

Journal: Frontiers in neuroscience

Authors' code: NBELab/afterimage (no license)

Status: code verified, 10 files readable, 9 matches

[6151] doi:10.3390/biomedicines14030692 [paper]

Quercetin Ameliorates Comorbid Insomnia in Diarrhea-Predominant Irritable Bowel Syndrome via the PI3K/AKT/NF-κB Signaling Pathway.

Journal: Biomedicines

Status: data only

[6152] doi:10.3390/v18030369 [paper]

A History of Methamphetamine Use Disorder in People with HIV Is Associated with Altered Functional Response to Risky Choice.

Journal: Viruses

Status: code on request

[6153] doi:10.34133/research.1200 [paper, data]

TRIM21 Exacerbates Ischemic Brain Injury by Promoting Astrocyte-Mediated Neuroinflammation via K63-Linked Ubiquitination of MDA5.

Journal: Research (Washington, D.C.)

Status: data only, 1 dataset cited

[6154] doi:10.64898/2026.03.14.711800 [paper, repository]

Midbrain <i>Tet1</i> dosage defines inter-individual binge-eating susceptibility

Journal: bioRxiv (preprint)

Authors' code: XinyangYu918/DNA-methylation-preprocessing (no license), XinyangYu918/EatingBehaviours-BrainMaturation-Psychopathology-Genetics (no license)

Status: code verified, 17 files readable, 3 matches

[6155] doi:10.64898/2026.03.15.711785 [paper, repository]

Müller glia–mediated regeneration restores neuronal diversity and circuit organization in the adult zebrafish retina

Journal: bioRxiv (preprint)

Authors' code: SherineAwad/Zebrafish_scRNASeq_scanpy (no license)

Status: code verified, 39 files readable, 5 matches

[6156] doi:10.64898/2026.03.16.711670 [paper, repository]

C9ORF72-derived polyGR polypeptides disrupt passive nucleocytoplasmic transport by tuning protein affinity for the nuclear pore barrier

Journal: bioRxiv (preprint)

Authors' code: holehouse-lab/PIMMS (LGPL-3.0), holehouse-lab/supportingdata (no license)

Status: code verified, 167 files readable, 3 matches

[6157] doi:10.7150/jca.130519 [paper, data]

Integrative Multi-Omics and Single-Cell Profiling Identify Chitinase Domain Containing Protein 1 (CHID1) as a Prognostic Biomarker in Glioblastoma.

Journal: Journal of Cancer

Status: data only, 1 dataset cited

[6158] doi:10.7150/thno.125235 [paper, repository]

Voxel-accurate MRI-microscopy Correlation Enables AI-powered Prediction of Brain Disease States.

Journal: Theranostics

Authors' code: venkataramani-lab (no license)

Status: code verified

Monday, 16 March 2026 (34 papers)

[6159] doi:10.1007/s00221-026-07270-5 [paper, repository]

Visuomotor information drives interference between the hands more than dynamic motor information during bimanual reaching.

Journal: Experimental brain research

Authors' code: philcd89 (no license)

Status: code verified

[6160] doi:10.1007/s10162-026-01041-3 [paper, repository]

The Interphase Gap Effect in Cochlear Implant Users: Biological Basis, Parameter Selection, Analytical Methods, and Quantitative Scales.

Journal: Journal of the Association for Research in Otolaryngology : JARO

Authors' code: tjbrochier/eCAP-AGF-Methods (no license)

Status: code verified, 4 files readable

[6161] doi:10.1007/s12672-026-04764-0 [paper, repository]

Integrative multi-omics analysis reveals an 11-gene malignant-myeloid interaction signature and identifies TPST1 as a potential regulator of immunosuppressive microenvironment in glioma.

Journal: Discover oncology

Authors' code: supp:PMC13103110/12672_2026_4764_MOESM2_ESM.r (no license)

Status: code verified, 1 file readable, 1 match

[6162] doi:10.1016/j.isci.2026.115373 [paper, repository]

Conserved post-odor dynamics in the olfactory systems of mice and locusts.

Journal: iScience

Authors' code: figshare 31435543 (CC-BY-4.0)

Status: code verified, 8 files readable, 1 match

[6163] doi:10.1016/j.isci.2026.115375 [paper, repository]

Bursts of regional cortical inhibition during smartphone use.

Journal: iScience

Authors' code: CODELABCODELIB/JID_ERP_Smartphone_2024 (no license), CODELABCODELIB/BetaburstInhibition_2025 (no license), CODELABLEIDEN/Non_goal_directed_smartphone_2022 (MIT)

Status: code verified, 96 files readable, 3 matches

[6164] doi:10.1038/s41467-026-70382-7 [paper, repository]

Identification of cis-regulatory elements provides insights into tissue-specific gene regulation in the sheep genome.

Journal: Nature communications

Authors' code: msalavat/cagewrap_public (no license), shang-qian/FAANG_sheep_code_NCsub (no license), codeocean:4241215 (no license)

Status: code verified, 106 files readable, 22 matches

[6165] doi:10.1038/s41467-026-70608-8 [paper, repository]

Semantic similarity across languages reflects neurocognitive dimensions shaped by climate.

Journal: Nature communications

Authors' code: OSF suyeb (no license), jvparidon/subs2vec (MIT)

Status: code verified, 29 files readable, 11 matches

[6166] doi:10.1038/s41598-026-42971-5 [paper, repository]

Adaptive state-feedback echo state networks for temporal sequence learning.

Journal: Scientific reports

Authors' code: CodrinLup/NatureESN (no license)

Status: code verified, 30 files readable

[6167] doi:10.1038/s41598-026-44052-z [paper, repository]

Distance-based temporal similarity metrics for adaptive channel selection in multi-modal EEG-fNIRS BCI frameworks.

Journal: Scientific reports

Authors' code: muratarican/AdaptiveChannelSelection (no license)

Status: code verified, 5 files readable

[6168] doi:10.1073/pnas.2513317123 [paper, repository]

The α-synuclein proteostasis network and its translational applications in Parkinson's disease.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: cran.r-project.org/web/packages (no license), christinemarialim/aSyn_PN (no license)

Status: code verified, 2 files readable

[6169] doi:10.1073/pnas.2518846123 [paper, repository]

Pharmaco-behavioral profiling identifies suppressors of autism gene-associated phenotypes in zebrafish.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: Zenodo 14957520 (MIT), ehoffmanlab/Weinschutz-Mendes-et-al-2023-behavior (GPL-3.0), jrihel/sleep-analysis (CC0-1.0), ZWang-Lab/Zebrafish-pharmaco-behavioral-database (MIT)

Status: code verified, 77 files readable

[6170] doi:10.1093/braincomms/fcag072 [paper, repository]

Time course of functional and structural brain network changes after mild traumatic brain injury.

Journal: Brain communications

Authors' code: Eun517/mtbi-structure-function-longitudinal (MIT)

Status: code verified, 5 files readable

[6171] doi:10.1093/braincomms/fcag088 [paper, repository]

Dual mechanism of anti-seizure medications in controlling seizure activity.

Journal: Brain communications

Authors' code: cnnp-lab/2025_ASM-SzState_GMB (no license)

Status: code verified, 2 files readable

[6172] doi:10.1093/braincomms/fcag091 [paper, repository]

Long-interval intracortical inhibition is similar in people with and without amyotrophic lateral sclerosis.

Journal: Brain communications

Authors' code: clinicalresearcher.org/software.htm (no license)

Status: code verified

[6173] doi:10.1162/imag.a.1142 [paper, repository]

Encoding neural representations of time-continuous stimulus-response transformations in the human brain with advanced deep neural networks.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: SHaberland15/Arcade_DQN_Research_fMRI (MIT)

Status: code verified, 20 files readable, 4 matches

[6174] doi:10.1162/imag.a.1162 [paper, repository]

NeuroConText: Contrastive learning for neuroscience meta-analysis with rich text representation.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: ghayem/NeuroConText (no license)

Status: code verified, 20 files readable, 3 matches

[6175] doi:10.1162/imag.a.1165 [paper, repository]

Resilience-related neural similarity during naturalistic movie watching.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: OSF cgjkf (no license)

Status: code verified, 2 files readable

[6176] doi:10.1162/nol.a.223 [paper, repository]

No Unique Magnocellular Facilitation in Parafoveal Processing: A Combined EEG and Eye Tracking Study.

Journal: Neurobiology of language (Cambridge, Mass.)

Authors' code: OSF abrpc (no license)

Status: code verified, 4 files readable, 2 matches

[6177] doi:10.1186/s12880-026-02276-5 [paper, repository]

Uncertainty-aware automated labeling of intracranial arteries using deep learning.

Journal: BMC medical imaging

Authors' code: JavierBZ/IC-UNet (Apache-2.0)

Status: code verified, 13 files readable, 3 matches

[6178] doi:10.1186/s12880-026-02284-5 [paper, data]

Impact of early glymphatic disorders on the development of vascular dementia.

Journal: BMC medical imaging

Status: data only, 1 dataset cited

[6179] doi:10.1186/s41747-026-00697-z [paper, data]

Radiomics in fetal brain MRI: a narrative review.

Journal: European radiology experimental

Status: data only, 1 dataset cited

[6180] doi:10.1186/s43074-026-00237-3 [paper]

Needle beam two-photon microscopy for simultaneous multiplane neural and vascular imaging in awake mice.

Journal: PhotoniX

Status: code on request

[6181] doi:10.1371/journal.pbio.3003695 [paper, data]

Eye movements reflect memory-related theta activity in the human brain.

Journal: PLoS biology

Status: data only, 1 dataset cited

[6182] doi:10.1371/journal.pcbi.1013385 [paper, repository]

iSTTC: A robust method for accurate estimation of intrinsic neural timescales from single-unit recordings.

Journal: PLoS computational biology

Authors' code: iinnpp/isttc (GPL-3.0)

Status: code verified, 109 files readable, 15 matches

[6183] doi:10.1371/journal.pcbi.1013688 [paper, repository]

Integrated multi-modal data analysis for computational modeling of healthy and location-dependent myocardial infarction conditions in porcine hearts.

Journal: PLoS computational biology

Authors' code: lino202/HeartModelling (GPL-3.0), lino202/simOmPP (GPL-3.0), lino202/ELECTRA (GPL-3.0)

Status: code verified, 2,565 files readable, 13 matches

[6184] doi:10.1371/journal.pcbi.1014059 [paper, repository]

Benchmarking spike source localization algorithms in high density probes.

Journal: PLoS computational biology

Authors' code: haozhao1996/Spike-Localization-Algorithms (MIT)

Status: code verified, 6 files readable, 3 matches

[6185] doi:10.21203/rs.3.rs-9011993/v1 [paper, repository]

A single-cell eQTL atlas of the developing human brain

Journal: Research Square (preprint)

Authors' code: pgc.unc.edu/for-researchers/download-results (no license)

Status: code verified

[6186] doi:10.3390/diagnostics16060875 [paper, repository]

An Adaptive Attention 3D U-Net for High-Fidelity MRI-to-CT Synthesis: Bridging the Anatomical Gap with CBAM.

Journal: Diagnostics (Basel, Switzerland)

Authors' code: shhhsbh/MRI-to-CT-cbam (no license)

Status: code verified, 2 files readable, 9 matches

[6187] doi:10.3758/s13415-025-01387-w [paper, data]

Meaningless but memorable: Reward associations boost recognition of abstract visual stimuli.

Journal: Cognitive, affective & behavioral neuroscience

Status: code on request, 1 dataset cited

[6188] doi:10.3758/s13415-026-01399-0 [paper, repository]

How the brain segments experience: ERP evidence of event boundaries enhancing memory formation in narratives.

Journal: Cognitive, affective & behavioral neuroscience

Authors' code: OSF f624h (no license)

Status: code verified, 3 files readable, 6 matches

[6189] doi:10.64898/2026.03.12.711496 [paper, repository]

Dynamic tracking of social variables in simultaneous brain recordings from socially interacting monkeys

Journal: bioRxiv (preprint)

Authors' code: OSF tu5ed (no license)

Status: code verified, 56 files readable, 10 matches

[6190] doi:10.7554/elife.105126 [paper, repository]

Distinct representational properties of cues and contexts shape fear and reversal learning.

Journal: eLife

Authors' code: OSF ngwka (no license), AntoineBouyeure/Representational-properties-of-cues-and-contexts-shape-fear-learning-and-reversal (CC-BY-4.0)

Status: code verified, 11 files readable, 9 matches

[6191] doi:10.7554/elife.105355 [paper, data]

Sex-specific single transcript level atlas of vasopressin and its receptor (AVPR1a) in the mouse brain.

Journal: eLife

Status: data only, 1 dataset cited

[6192] doi:10.7554/elife.107111 [paper, repository]

The distinct role of human PIT in attention control.

Journal: eLife

Authors' code: herrlich10/mripy (MIT)

Status: code verified, 70 files readable, 6 matches

Sunday, 15 March 2026 (9 papers)

[6193] doi:10.1002/advs.202510538 [paper, repository]

Temporal and Cell-Specific Regulation of Synaptic Homeostasis by the Chromatin Remodeler Chd1.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Authors' code: wanglab-georgetown/HFRP_analysis (Apache-2.0), wanglab-georgetown/JOINT (Apache-2.0), wanglab-georgetown/fractal (Apache-2.0)

Status: code verified, 21 files readable

[6194] doi:10.1002/anie.202524636 [paper, data]

Quantification and Localisation of New Brain Lipid Synthesis Using Deuterium Oxide and High Resolution Mass Spectrometry.

Journal: Angewandte Chemie (International ed. in English)

Status: data only, 1 dataset cited

[6195] doi:10.1002/jez.b.70019 [paper, repository]

ParaHox Genes Revisited: From Gut Patterning to Integrated Axial and Neural Organization in Rotifera.

Journal: Journal of experimental zoology. Part B, Molecular and developmental evolution

Authors' code: rambaut/figtree (no license)

Status: code verified, 209 files readable

[6196] doi:10.1038/s41380-026-03500-y [paper, repository]

Altered frontal and occipital cortical microstructure in obsessive-compulsive disorder - a multisite mega-analysis.

Journal: Molecular psychiatry

Authors' code: anderslthorsen/OBIC-GWC (no license)

Status: code verified, 91 files readable, 7 matches

[6197] doi:10.1038/s41467-026-70356-9 [paper, data]

A topographical organization in the primary olfactory cortex.

Journal: Nature communications

Status: data only, 1 dataset cited

[6198] doi:10.1038/s41467-026-70633-7 [paper, repository]

Global coincident bursts of high frequency oscillations across the human cortex coordinate large-scale memory processing.

Journal: Nature communications

Authors' code: brainandmindlab/coincident-hfo (MIT)

Status: code verified, 6 files readable, 3 matches

[6199] doi:10.1113/jp288582 [paper, data]

Neuronal loss of the pentose phosphate pathway in the living nervous system is causally linked to [NADPH] reduction and elevated oxidative stress.

Journal: The Journal of physiology

Status: data only, 1 dataset cited

[6200] doi:10.1186/s12014-025-09577-x [paper, repository]

Validation of human kallikrein 6 in the cerebrospinal fluid of patients with progressive and non-progressive alzheimer's disease: correlation with other biomarkers.

Journal: Clinical proteomics

Authors' code: miyohtnk/PhD_KLK6_data_analysis (MIT), miyohtnk/phd (no license)

Status: code verified, 1 file readable, 2 matches

[6201] doi:10.3390/s26061848 [paper, data]

Unsupervised Dynamic Time Warping Clustering for Robust Functional Network Identification in fNIRS Motor Tasks.

Journal: Sensors (Basel, Switzerland)

Status: data only, 1 dataset cited

Saturday, 14 March 2026 (21 papers)

[6202] doi:10.1002/advs.202514972 [paper, data]

Neuid: A Novel Neuron-Enriched LncRNA that Connects Epigenetic Gene Silencing to Alzheimer's Disease.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Status: data only, 1 dataset cited

[6203] doi:10.1002/ana.78193 [paper, repository]

Chronological Diagnostic Algorithm Predicting Neuropathology in Parkinsonism.

Journal: Annals of neurology

Authors' code: onnonuro/chronognosis (Apache-2.0)

Status: code verified, 6 files readable, 2 matches

[6204] doi:10.1002/epi.70153 [paper, repository]

KCNJ4 variants disrupt inward-rectifier potassium channel function and cause refractory epilepsy.

Journal: Epilepsia

Authors' code: figshare 963153 (CC-BY-4.0)

Status: empty repository

[6205] doi:10.1016/j.celrep.2026.117067 [paper, repository]

A brain stem circuit integrating reflexive and anticipatory salivation.

Journal: Cell reports

Authors' code: djamesbarker/pMAT (GPL-3.0)

Status: code verified, 35 files readable, 1 match

[6206] doi:10.1016/j.celrep.2026.117110 [paper, repository]

Single-nucleus multiome analysis in the human prefrontal cortex identifies gene expression and cis-regulatory elements associated with aging.

Journal: Cell reports

Authors' code: NIH-CARD/scMAVERICS (other), Zenodo 18135365 (CC-BY-4.0)

Status: code verified, 119 files readable, 11 matches

[6207] doi:10.1016/j.xpro.2026.104424 [paper]

Protocol for targeted peripheral adeno-associated viral vector transduction of the intradental neurons in mice.

Journal: STAR protocols

Status: code on request

[6208] doi:10.1038/s41467-026-69950-8 [paper, repository]

Dopaminergic processes predict temporal distortions in event memory.

Journal: Nature communications

Authors' code: OSF yt6hm (no license), d.docs.live.net/69e036cd301315ff/documents (no license), OSF 8y7hr (no license)

Status: code verified, 6 files readable, 9 matches

[6209] doi:10.1038/s41467-026-70243-3 [paper, repository]

TYK2 mediates neuroinflammation in Alzheimer's disease brains with TDP-43 pathology.

Journal: Nature communications

Authors' code: Zenodo 18100691 (MIT), labsyspharm/ad-personalized (MIT)

Status: code verified, 40 files readable, 10 matches

[6210] doi:10.1038/s41467-026-70478-0 [paper, repository]

Jagged-mediated lateral induction patterns Notch3 signaling within adult neural stem cell populations.

Journal: Nature communications

Authors' code: Zenodo 18244815 (BSD-3-Clause), migmtz/spatialn3icd (BSD-3-Clause)

Status: code verified, 36 files readable, 1 match

[6211] doi:10.1038/s41467-026-70519-8 [paper, repository]

Dopamine and serotonin inversely modulate D2 medium spiny neurons to regulate cocaine reward.

Journal: Nature communications

Authors' code: dcardozop/CardozoPinto_Guo_2026_NatCommun (no license)

Status: code verified, 6 files readable, 6 matches

[6212] doi:10.1038/s41467-026-70536-7 [paper, repository]

Cortical representation of multidimensional handwriting movement and implications for neuroprostheses.

Journal: Nature communications

Authors' code: yaoyao-hao/handwriting_codec (GPL-3.0)

Status: code verified, 7 files readable, 4 matches

[6213] doi:10.1038/s41467-026-70659-x [paper, repository]

Noradrenaline causes a spread of association in the hippocampal cognitive map.

Journal: Nature communications

Authors' code: p-rakriti/koolschijn_et_al (no license)

Status: code verified, 3 files readable

[6214] doi:10.1038/s41597-026-07041-5 [paper, repository]

A human EEG dataset to study cognitive flexibility during auditory discrimination under real-world distractors.

Journal: Scientific data

Authors' code: OSF zx2up (no license)

Status: code verified, 4 files readable, 4 matches

[6215] doi:10.1038/s41598-026-42906-0 [paper, data]

Social learning of emotion and its implication for memory: an ERP study.

Journal: Scientific reports

Status: data only, 1 dataset cited

[6216] doi:10.1038/s41598-026-44151-x [paper, data]

A logic-based knowledge-driven bidirectional multi-attention GRU framework for fear level classification in humans.

Journal: Scientific reports

Status: data only, 1 dataset cited

[6217] doi:10.1038/s42003-026-09839-w [paper, data]

Thalamic dynamics orchestrate the recovery of tonic alertness during nocturnal sleep inertia.

Journal: Communications biology

Status: data only, 1 dataset cited

[6218] doi:10.1038/s42003-026-09845-y [paper, data]

Increased susceptibility to 4-HNE-induced toxicity and impaired development in a model of ALDH4A1-deficient pediatric epilepsy carrying the S352L variant.

Journal: Communications biology

Status: data only, 1 dataset cited

[6219] doi:10.1117/1.nph.13.2.025001 [paper, repository]

Surface-based image reconstruction optimization for high-density functional near-infrared spectroscopy.

Journal: Neurophotonics

Authors' code: ibs-lab/cedalion (MIT), lauracarlton/image_reconstruction_optimization (no license)

Status: code verified, 228 files readable, 23 matches

[6220] doi:10.3390/brainsci16030312 [paper]

The Effects of Mindfulness on Brain Network Dynamics Following an Acute Stressor in a Population of Drinking Adults.

Journal: Brain sciences

Status: code on request

[6221] doi:10.64898/2026.03.12.710517 [paper, repository]

Cortical excitability inversely modulates fMRI connectivity via low-frequency neuronal coupling

Journal: bioRxiv (preprint)

Authors' code: functional-neuroimaging/rsfMRI-preprocessing (no license), panzerilab/Ephys-Analyses_pub (no license), panzerilab/Electrophysiologically-defined-excitation-inhibition-autism-neurosubtypes (MIT)

Status: code verified, 1,709 files readable, 14 matches

[6222] doi:10.64898/2026.03.12.711239 [paper, repository]

Back-illumination Phase Imaging Enables Nanoscale Drift Stabilization in Non-transparent Biological Tissues

Journal: bioRxiv (preprint)

Authors' code: hmanko/hDPC_autofocus (no license)

Status: code verified, 4 files readable, 3 matches

Friday, 13 March 2026 (55 papers, 50 on this page)

[6223] doi:10.1002/advs.202508815 [paper, data]

Microglia Mitochondria Support Neuronal Maturation via Metabolic and Transcriptional Reprogramming in Human 3D In Vitro Brain Model.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Status: data only, 1 dataset cited

[6224] doi:10.1002/advs.202516310 [paper, data]

A Tac1-Expressing Brainstem Pathway Underlies the Pathogenesis of Trigeminal Neuralgia.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Status: data only, 1 dataset cited

[6225] doi:10.1002/advs.202521254 [paper, repository]

Persistently Increased Expression of PKMzeta and Unbiased Gene Expression Profiles Identify Hippocampal Molecular Traces of a Long-Term Active Place Avoidance Memory and "Shadow" Proteins.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Authors' code: sommerJY/APA_PKMZ (no license)

Status: code verified, 9 files readable, 9 matches

[6226] doi:10.1002/epi.70161 [paper, data]

Decoding epilepsy's molecular blueprint: Machine learning unravels transcriptomic subtypes and regulatory networks.

Journal: Epilepsia

Status: data only, 1 dataset cited

[6227] doi:10.1007/s00429-026-03098-5 [paper, repository]

Structural and functional brain asymmetry in relation to heterogeneous causes of situs inversus totalis.

Journal: Brain structure & function

Authors' code: mengyunwang/situs_inversus](https: (no license)

Status: dead link

[6228] doi:10.1007/s11682-026-01109-x [paper, repository]

APOE ε4 carriage is associated with olfactory-hippocampal tract functional connectivity.

Journal: Brain imaging and behavior

Authors' code: olemiss.edu/projects/dnl (no license)

Status: dead link

[6229] doi:10.1016/j.ajhg.2026.02.014 [paper]

Selective chr21 homolog silencing reveals polymorphisms influence the epigenetic silencing and functional dosage of RWDD2B.

Journal: American journal of human genetics

Status: code on request

[6230] doi:10.1016/j.crmeth.2026.101332 [paper, repository]

A genetic strategy for targeting local astrocytes in adult Drosophila.

Journal: Cell reports methods

Authors' code: joanadopp/astroTRACT_paper (no license), Zenodo 18338021 (CC-BY-4.0)

Status: code verified, 3 files readable

[6231] doi:10.1016/j.crmeth.2026.101338 [paper]

MitoTracker transfers from astrocytes to neurons independently of mitochondria.

Journal: Cell reports methods

Status: code on request

[6232] doi:10.1016/j.isci.2026.115317 [paper, repository]

Response dynamics of discrete subiculum→retrosplenial cortex projections underlying trace fear conditioning.

Journal: iScience

Authors' code: RadulovicLab/Nature-2024 (no license)

Status: code verified, 2 files readable

[6233] doi:10.1016/j.isci.2026.115361 [paper, data]

Glioblastoma invasion into different organoid hosts reveals cell-intrinsic and proliferative migratory programs.

Journal: iScience

Status: code on request, 1 dataset cited

[6234] doi:10.1016/j.isci.2026.115369 [paper, repository]

Spectral dynamic causal modeling of effective connectivity across multiple brain networks in pilot trainees.

Journal: iScience

Authors' code: Zenodo 18463993 (CC-BY-4.0)

Status: code verified, 3 files readable, 1 match

[6235] doi:10.1016/j.neuroimage.2026.121862 [paper]

Biological validity, test-retest reliability, and behavioral relevance of the single-subject brain volumetric similarity network.

Journal: NeuroImage

Status: code on request

[6236] doi:10.1016/j.xpro.2026.104422 [paper]

Protocol for generation of brain metastasis mouse model using stereotactic intracranial tumor-derived cells and modified intracarotid injection.

Journal: STAR protocols

Status: code on request

[6237] doi:10.1016/j.xpro.2026.104423 [paper, repository]

Protocol for quality control screening of brain organoid morphology.

Journal: STAR protocols

Authors' code: jboulanger/Organoid_morphology (no license)

Status: empty repository, 1 file readable

[6238] doi:10.1038/s41372-026-02601-4 [paper, repository]

Brain volumes in fetuses with congenital heart disease and placental vascular abnormalities.

Journal: Journal of perinatology : official journal of the California Perinatal Association

Authors' code: IntelligentImaging/CRL-2025-MAS (no license)

Status: code verified, 10 files readable, 1 match

[6239] doi:10.1038/s41392-026-02604-9 [paper]

Gut microbiota modulation via repeated donor fecal transplantation improves motor and gastrointestinal symptoms in drug-naïve Parkinson's disease: a randomized phase 2 trial.

Journal: Signal transduction and targeted therapy

Status: code on request

[6240] doi:10.1038/s41393-026-01191-4 [paper]

Comparison of health outcomes between traumatic spinal cord and cauda equina injuries.

Journal: Spinal cord

Status: code on request

[6241] doi:10.1038/s41467-026-70347-w [paper, repository]

Desegregation of neuronal predictive processing.

Journal: Nature communications

Authors' code: BinW3233/HDPC_code (no license)

Status: code verified, 8 files readable

[6242] doi:10.1038/s41467-026-70575-0 [paper, data]

Structure of a pH-sensitive pentameric ligand-gated ion channel from the Sarcoptes scabies mite.

Journal: Nature communications

Status: data only, 2 datasets cited

[6243] doi:10.1038/s41467-026-70694-8 [paper, repository]

Shared genetic and neuroimmune architecture links type 1 diabetes with neurocognitive traits.

Journal: Nature communications

Authors' code: AlagsLabTeam/T1D-NEURO (no license), Zenodo 18793533 (CC-BY-4.0)

Status: code verified, 20 files readable, 4 matches

[6244] doi:10.1038/s41540-026-00681-8 [paper, repository]

Neuronal and glial networks interact with traumatic brain injury to modulate cognition in ABCD study.

Journal: NPJ systems biology and applications

Authors' code: XiaYangLabOrg/ABCD_GWAS (no license)

Status: dead link

[6245] doi:10.1038/s41562-026-02414-7 [paper, repository]

Optimized feature gains explain and predict successes and failures of human selective listening.

Journal: Nature human behaviour

Authors' code: mcdermottLab/auditory_attention (MIT), OSF wjzvu (no license)

Status: code verified, 144 files readable, 17 matches

[6246] doi:10.1038/s41593-026-02228-w [paper, repository]

Circuit response to neuromodulation characterized with simultaneous deep brain stimulation and precision neuroimaging in humans.

Journal: Nature neuroscience

Authors' code: pBFSLab/open-DBS (no license), deepprep.readthedocs.io (no license)

Status: code verified, 32 files readable, 7 matches

[6247] doi:10.1038/s41598-026-40961-1 [paper, data]

Efficient cosine-windowed cross-correlation for intermediate deformable image registration.

Journal: Scientific reports

Status: data only, 1 dataset cited

[6248] doi:10.1038/s41598-026-41137-7 [paper, repository]

Deep optimization-guided hybrid neural network for accurate detection and segmentation of white matter hyperintensities in clinical MRI images.

Journal: Scientific reports

Authors' code: Zenodo 18604208 (CC-BY-4.0)

Status: code verified, 4 files readable

[6249] doi:10.1038/s41598-026-43798-w [paper, repository]

A Machine learning pipeline to investigate tissue ingrowth in cerebral aneurysms using preclinical animal models.

Journal: Scientific reports

Authors' code: SarderLab/Ingrowth-Segmentation-DSA-Plugin (Apache)

Status: code verified, 16 files readable, 2 matches

[6250] doi:10.1073/pnas.2512071123 [paper, repository]

Narrative "twist" shifts within-individual neural representations of dissociable story features.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: thefinnlab/darkend_narrative_rep (no license)

Status: code verified, 25 files readable, 2 matches

[6251] doi:10.1073/pnas.2517059123 [paper, repository]

Stretch and flow at the gliovascular interface: High-fidelity modeling of astrocyte endfeet.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: Zenodo 15303023 (CC-BY-4.0)

Status: code verified, 58 files readable, 7 matches

[6252] doi:10.1093/braincomms/fcag071 [paper, repository]

The lesion correlates of impaired content word fluency during spoken discourse in aphasia.

Journal: Brain communications

Authors' code: masurp/ggmirt (GPL-3.0), OSF rhmqv (no license)

Status: code verified, 25 files readable

[6253] doi:10.1093/haschl/qxag060 [paper, data]

Influence of social determinants of health on post-acute use and outcome: a scoping review.

Journal: Health affairs scholar

Status: data only, 1 dataset cited

[6254] doi:10.1113/jp289326 [paper, data]

Maternal obesity induces activator protein 1-mediated inflammatory response to impair embryonic neurogenesis.

Journal: The Journal of physiology

Status: data only, 1 dataset cited

[6255] doi:10.1162/imag.a.1161 [paper, data]

The infant brain rapidly entrains to visual statistical regularities during stimulus exposure.

Journal: Imaging neuroscience (Cambridge, Mass.)

Status: data only, 1 dataset cited

[6256] doi:10.1186/s12916-026-04783-2 [paper, data]

Myeloid-derived immunosuppression of chimeric antigen receptor T cells in the neuronal microenvironment of glioblastoma.

Journal: BMC medicine

Status: data only, 2 datasets cited

[6257] doi:10.1186/s12951-026-04272-x [paper, data]

Self-amplifying RNA therapy encoding CNTF with disulfiram co-delivery promotes optic nerve repair through microglial pyroptosis inhibition and RGC axonal regeneration.

Journal: Journal of nanobiotechnology

Status: data only, 1 dataset cited

[6258] doi:10.1186/s13073-026-01608-y [paper, data]

Succinate supplementation ameliorates musculoskeletal defects caused by PLOD3 mutations in a BCARD syndrome model.

Journal: Genome medicine

Status: data only, 1 dataset cited

[6259] doi:10.1186/s40478-026-02273-3 [paper, data]

Single cell protein profiling of focal cortical dysplasia in a patient requiring multiple resections.

Journal: Acta neuropathologica communications

Status: data only, 1 dataset cited

[6260] doi:10.1371/journal.pbio.3003707 [paper, repository]

Behavioral engagement facilitates auditory neuron responses beyond their receptive fields.

Journal: PLoS biology

Authors' code: Zenodo 18736680 (CC-BY-4.0), ccg1988/Attention_PLoS_Biology_2026 (no license)

Status: code verified, 126 files readable, 8 matches

[6261] doi:10.1371/journal.pcbi.1013342 [paper, repository]

Towards model-based characterization of individual electrically stimulated nerve fibers.

Journal: PLoS computational biology

Authors' code: Zenodo 15848230 (CC-BY-4.0)

Status: code verified, 1 file readable

[6262] doi:10.1523/eneuro.0459-25.2026 [paper, repository]

Open-Source Platform for Adjustable Training Regimes in Freely Moving and Head-Fixed Mice.

Journal: eNeuro

Authors' code: Mdcrespo/BehavioralPlatform (BSD-3-Clause)

Status: code verified, 21 files readable, 5 matches

[6263] doi:10.21203/rs.3.rs-9060414/v1 [paper, repository]

Cross-Species Aging Knowledge Integration into Agentic AI Platform Uncovers Conserved Mechanisms

Journal: Research Square (preprint)

Authors' code: the-ahuja-lab/EvoAge (MIT), hub.docker.com/r/ahujalab (no license)

Status: code verified, 421 files readable, 21 matches

[6264] doi:10.3389/fdgth.2026.1691088 [paper, repository]

Real-world federated learning for brain imaging scientists.

Journal: Frontiers in digital health

Authors' code: AIMS-VUB/FLightcase (CC-BY-NC-ND-4.0), midiconsortium/brainage (CC-BY-NC-ND-4.0)

Status: code verified, 27 files readable, 2 matches

[6265] doi:10.3389/fimmu.2026.1727784 [paper, data]

CPEB1 drives ferroptosis-neuroinflammation crosstalk in temporal lobe epilepsy via the SIRT1-NRF2 acetylation axis.

Journal: Frontiers in immunology

Status: data only, 1 dataset cited

[6266] doi:10.3389/fnmol.2026.1741120 [paper, data]

Transcriptomic identification of CREB1 and FOXO1 activation in neuregulin-1-mediated neuroprotection after stroke.

Journal: Frontiers in molecular neuroscience

Status: data only, 1 dataset cited

[6267] doi:10.3389/fpsyt.2026.1696515 [paper, repository]

Loneliness in adolescents and youth with bipolar disorder: a scoping review.

Journal: Frontiers in psychiatry

Authors' code: OSF 5wx9n (no license)

Status: empty repository

[6268] doi:10.3389/fpsyt.2026.1708563 [paper, repository]

Multi-voxel MR-spectroscopy signatures and associations with EEG network hyperexcitability and clinical symptomatology in borderline personality disorder.

Journal: Frontiers in psychiatry

Authors' code: berndf/avg_q (GPL-3.0)

Status: code verified, 494 files readable, 1 match

[6269] doi:10.3390/bioengineering13030332 [paper, repository]

Brain-Oct-Pvt: A Physics-Guided Transformer with Radial Prior and Deformable Alignment for Neurovascular Segmentation.

Journal: Bioengineering (Basel, Switzerland)

Authors' code: PreciousFlower/Brain-OCT (MIT)

Status: empty repository, 1 file readable

[6270] doi:10.3390/bios16030157 [paper, data]

A Cloud-Aware Scalable Architecture for Distributed Edge-Enabled BCI Biosensor System.

Journal: Biosensors

Status: data only, 1 dataset cited

[6271] doi:10.34133/research.1180 [paper, repository]

Machine-Learning-Accelerated Design of Ternary Carrier-Free Nanomedicine for Intranasal Therapy of Brain Metastatic Non-small-cell Lung Cancer.

Journal: Research (Washington, D.C.)

Authors' code: changkunpeng/Machine-Learning-Accelerated-Design-of-Ternary-Carrier-Free-Nanomedicine (no license)

Status: code verified

[6272] doi:10.3758/s13415-026-01420-6 [paper]

Are neural and behavioural measures of cognitive control associated with adaptive and maladaptive risk-taking in adolescence and young adulthood?

Journal: Cognitive, affective & behavioral neuroscience

Status: code on request

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