Every paper, by date: page 29

44,644 papers with a page: 24,189 with their authors' code, 4,955 with code on request, 15,495 with data only. The most recent first, 224 a page. Page 29 of 200: 13 March 2026 to 6 March 2026.

Friday, 13 March 2026 (55 papers, 5 on this page)

[6273] doi:10.64898/2026.03.11.711052 [paper, repository]

Lempel-Ziv complexity of simultaneous surface electromyography and magnetomyography during muscle fatigue

Journal: bioRxiv (preprint)

Authors' code: OSF fpdhn (no license)

Status: code verified, 12 files readable, 1 match

[6274] doi:10.64898/2026.03.11.711185 [paper, data]

The inferior olive transforms upstream sensorimotor errors into cerebellar teaching signals

Journal: bioRxiv (preprint)

Status: data only, 2 datasets cited

[6275] doi:10.64898/2026.03.12.26348052 [paper]

Sex-specific differences in nonlinear associations between glycaemia and brain health in UK Biobank

Journal: medRxiv (preprint)

Status: code on request

[6276] doi:10.7554/elife.89001 [paper, repository]

Human-specific lncRNAs contributed critically to human evolution by distinctly regulating gene expression.

Journal: eLife

Authors' code: linjiecodes/egramv2r1 (MIT)

Status: code verified, 3 files readable, 2 matches

[6277] doi:10.7554/elife.95562 [paper, repository]

Spatially targeted inhibitory rhythms differentially affect neuronal integration.

Journal: eLife

Authors' code: modeldb:2019883 (no license), dbheadley/InhibOnDendComp (MIT)

Status: code verified, 77 files readable, 29 matches

Thursday, 12 March 2026 (53 papers)

[6278] doi:10.1002/adhm.202504849 [paper]

ETV2 Mediated Differentiation of Human Pluripotent Stem Cells Results in Functional Endothelial Cells for Engineering Advanced Vascularized Microphysiological Models.

Journal: Advanced healthcare materials

Status: data only

[6279] doi:10.1002/btm2.70123 [paper, data]

BrAIn: A comprehensive artificial intelligence-based morphology analysis system for brain organoids and neuroscience.

Journal: Bioengineering & translational medicine

Status: data only, 1 dataset cited

[6280] doi:10.1002/mds.70265 [paper, repository]

Differential Progression of Neuroinflammation in Patients with Isolated Rapid-Eye-Movement Sleep Behavior Disorder.

Journal: Movement disorders : official journal of the Movement Disorder Society

Authors' code: lassemadsen (no license)

Status: code verified

[6281] doi:10.1002/mrm.70333 [paper, repository]

Phase-Pole-Free Images and Smooth Coil Sensitivity Maps by Regularized Nonlinear Inversion.

Journal: Magnetic resonance in medicine

Authors' code: ralobos/PISCO (MIT), gitlab.tugraz.at/ibi/mrirecon/papers/phase-pole (CC-BY-4.0)

Status: code verified, 53 files readable

[6282] doi:10.1016/j.celrep.2026.117073 [paper, repository]

Single-cell epigenomics uncovers heterochromatin instability and transcription factor dysfunction during mouse brain aging.

Journal: Cell reports

Authors' code: luisajamaral/aging_mouse_brain_code (no license)

Status: code verified, 152 files readable, 14 matches

[6283] doi:10.1016/j.isci.2026.115330 [paper]

Passive OPM-MEG paradigm reveals altered brain network organization in children with DLD.

Journal: iScience

Status: code on request

[6284] doi:10.1016/j.isci.2026.115349 [paper]

Oxytocin ameliorates early life stress-induced anxiety-like behavior by normalizing corticotropin-releasing hormone neuron activity in the PVN.

Journal: iScience

Status: code on request

[6285] doi:10.1016/j.isci.2026.115355 [paper, data]

Strategies used by two memories to share space in a small molluscan neural network.

Journal: iScience

Status: code on request, 1 dataset cited

[6286] doi:10.1016/j.neuroimage.2026.121857 [paper, data]

Echoes of time: Organization of episodic autobiographical memories in the brain according to their remoteness.

Journal: NeuroImage

Status: code on request, 2 datasets cited

[6287] doi:10.1016/j.neuroimage.2026.121861 [paper]

Experimental evaluation of an integrated focused ultrasound and electroencephalography approach for developing activation-informed neuroimaging.

Journal: NeuroImage

Status: code on request

[6288] doi:10.1016/j.neuron.2026.01.027 [paper]

Endocytome profiling uncovers cell-surface protein dynamics underlying neuronal connectivity.

Journal: Neuron

Status: code on request

[6289] doi:10.1016/j.neurot.2026.e00868 [paper, data]

Persistent histone H3K27 acetylation contributes to excessive scar formation after spinal cord injury through the regulation of microglial cholesterol accumulation.

Journal: Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics

Status: data only, 1 dataset cited

[6290] doi:10.1016/j.neurot.2026.e00884 [paper, repository]

Test-retest reliability and symptom association of personalized depression TMS targets: A comparative study of refined seed-based (RSA) and hierarchical clustering (HCA) approaches.

Journal: Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics

Authors' code: HuiiiZ/PersonalizedTargeting_NI (no license)

Status: code verified, 3 files readable, 3 matches

[6291] doi:10.1016/j.omtn.2026.102896 [paper]

Exosome-like nanovesicles from acerola for CRISPR-Cas9 ribonucleoprotein delivery to the central nervous system.

Journal: Molecular therapy. Nucleic acids

Status: code on request

[6292] doi:10.1016/j.redox.2026.104127 [paper]

SLC22A3 deficiency leads to cognitive impairment through the cardio-neuroinflammatory axis mediated HA/H1R/NLRP3 pathway in heart failure mice.

Journal: Redox biology

Status: data only

[6293] doi:10.1016/j.xpro.2026.104430 [paper, repository]

Protocol for recording visual maps in the mouse superior colliculus and visual cortex with intrinsic optical imaging.

Journal: STAR protocols

Authors' code: tchetch12/IOI_Retinotopy_Analysis (no license), Zenodo 18662251 (CC-BY-4.0)

Status: code verified, 6 files readable

[6294] doi:10.1038/s41398-026-03851-8 [paper, data]

Consistent cortico-basal ganglia-cerebellar activation in early motor sequence learning: a systematic review and meta-analysis.

Journal: Translational psychiatry

Status: data only, 1 dataset cited

[6295] doi:10.1038/s41467-026-70287-5 [paper, repository]

Cortical-limbic circuit dynamics of approach-avoidance conflict in humans.

Journal: Nature communications

Authors' code: Zenodo 17727554 (CC-BY-4.0), Zenodo 17727552 (CC-BY-4.0), Zenodo 22255210 (MIT), morrocwi/rrhm-open-lab (MIT), Zenodo 22255211 (MIT), bstavel/staveland_et_al_pacman_statistics_and_behavior (no license), bstavel/staveland_et_al_pacman_neural_analyses (no license)

Status: code verified, 255 files readable, 10 matches

[6296] doi:10.1038/s41467-026-70354-x [paper, repository]

Global error signal guides local optimization in mismatch calculation.

Journal: Nature communications

Authors' code: johnhongyumeng/DuetPredictiveCoding_Plasticity (no license)

Status: code verified, 23 files readable, 2 matches

[6297] doi:10.1038/s41467-026-70374-7 [paper, repository]

scTWAS: a powerful statistical framework for single-cell transcriptome-wide association studies.

Journal: Nature communications

Authors' code: ZhaotongL/scTWAS (other), ZhaotongL/scTWAS_paper (no license), Zenodo 18434920 (CC-BY-4.0), Zenodo 18434979 (CC-BY-4.0)

Status: code verified, 52 files readable, 6 matches

[6298] doi:10.1038/s41467-026-70523-y [paper, repository]

mist: a hierarchical Bayesian framework for detecting differential DNA methylation dynamics in single-cell data.

Journal: Nature communications

Authors' code: Zenodo 18451940 (CC-BY-4.0), dxd429/mist (other), dxd429/mistdata (no license)

Status: code verified, 46 files readable, 2 matches

[6299] doi:10.1038/s41531-026-01314-x [paper, data]

Imaging and genome-supported association of glymphatic system function and multiregional brain characteristics with Parkinson's disease.

Journal: NPJ Parkinson's disease

Status: code on request, 1 dataset cited

[6300] doi:10.1038/s41592-026-03023-y [paper]

Isotonic and minimally invasive optical clearing media for live cell imaging ex vivo and in vivo.

Journal: Nature methods

Status: code on request

[6301] doi:10.1038/s41598-026-41561-9 [paper, repository]

Hybrid knowledge- and data-driven modelling for robust spike detection and sorting in human C-fiber microneurography.

Journal: Scientific reports

Authors' code: Digital-C-Fiber/SpikeSortingForSpikingPatterns (MIT), digital-c-fiber/spikesortingforspikingpatterns](https: (no license)

Status: code verified, 20 files readable, 14 matches

[6302] doi:10.1038/s41598-026-41735-5 [paper, data]

End-to-end example-based sim-to-real RL policy transfer based on neural stylisation with application to robotic cutting.

Journal: Scientific reports

Status: data only, 1 dataset cited

[6303] doi:10.1038/s41598-026-42197-5 [paper, repository]

Decoding real-world visual scenes from alpha and gamma band flicker evoked oscillations in human EEG.

Journal: Scientific reports

Authors' code: OSF nf6vm (no license)

Status: code verified, 1 file readable, 3 matches

[6304] doi:10.1038/s41598-026-42310-8 [paper, repository]

Sleep awake detection from leg-worn wearables using deep sensor fusion.

Journal: Scientific reports

Authors' code: Madeby7/Sleep-State-Detection (no license)

Status: code verified, 5 files readable, 8 matches

[6305] doi:10.1038/s41598-026-43321-1 [paper, repository]

Machine-learning prediction and risk stratification of 12-month cognitive decline in Alzheimer's disease using routine clinical and MRI data.

Journal: Scientific reports

Authors' code: gengyinghui/ADNI-12M-Cognitive-Decline-ML (MIT)

Status: code verified, 18 files readable, 18 matches

[6306] doi:10.1038/s41598-026-43946-2 [paper, data]

Human lateral occipital complex is invariant for position and size transformations at the single-neuron level.

Journal: Scientific reports

Status: data only, 1 dataset cited

[6307] doi:10.1038/s42003-026-09831-4 [paper, repository]

Comprehensive large-scale analyses reveal association between brain structure and cognitive ability during adolescence.

Journal: Communications biology

Authors' code: JDYan/Brain-Cognition-Association (no license)

Status: code verified, 3 files readable

[6308] doi:10.1038/s44271-026-00431-w [paper, repository]

Alpha power increases spontaneously during a neurofeedback session.

Journal: Communications psychology

Authors' code: OSF wevtz (no license)

Status: code verified, 13 files readable, 4 matches

[6309] doi:10.1038/s44328-026-00086-x [paper, repository]

Microfluidic nanomagnetically isolated neuron- and astrocyte-derived extracellular vesicles to differentiate Lewy body and Alzheimer's disease.

Journal: Npj biosensing

Authors' code: doi:10.5061/dryad.612jm64j4 (no license)

Status: code verified

[6310] doi:10.1073/pnas.2424514123 [paper, data]

A <i>KCNC1</i> variant linked to Rett syndrome disrupts ER to Golgi trafficking of Kv3.1 channel.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Status: data only, 1 dataset cited

[6311] doi:10.1073/pnas.2510886123 [paper, data]

Hypothalamic endoplasmic reticulum stress drives pubertal precocity due to early-onset obesity in female rodents.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Status: data only, 1 dataset cited

[6312] doi:10.1073/pnas.2532488123 [paper, repository]

Control of microglial dynamics by the Arp2/3 complex and the autism- and schizophrenia-associated protein CYFIP1.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: AttwellLab (no license)

Status: code verified

[6313] doi:10.1085/jgp.202513925 [paper, data]

Sequential membrane remodeling by cholesterol distinctly modulates HCN channels in naïve and neuropathic DRG neurons.

Journal: The Journal of general physiology

Status: data only, 1 dataset cited

[6314] doi:10.1093/braincomms/fcag043 [paper, repository]

Linking movement-related beta oscillations to cortical excitability, structural damage, and fatigue in multiple sclerosis.

Journal: Brain communications

Authors' code: ElisaT-Neuro/MS_beta_fatigue (MIT)

Status: code verified, 8 files readable, 8 matches

[6315] doi:10.1093/braincomms/fcag080 [paper, repository]

Synergistic effects of cerebral small vessel disease burden and plasma phosphorylated tau 181 on white matter microstructure and cognition in a Chinese cohort.

Journal: Brain communications

Authors' code: xjx98/SynergisticEffectsofCSVDandAD (no license)

Status: code verified, 18 files readable, 3 matches

[6316] doi:10.1093/braincomms/fcag081 [paper, repository]

Sex differences in diffusion-weighted imaging outcomes in autosomal dominant Alzheimer's disease.

Journal: Brain communications

Authors' code: averi-giudicessi/colbos_dwi_scripts (no license)

Status: code verified, 7 files readable, 10 matches

[6317] doi:10.1162/imag.a.1164 [paper, repository]

Bias and generalizability of brain age prediction models: A multi-cohort evaluation with anatomical and interpretability insights.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: vishnubashyam/deepbrainnet (no license), mabelzunce/brainage-models-benchmark (MIT)

Status: code verified, 175 files readable, 9 matches

[6318] doi:10.1162/imag.a.1169 [paper, repository]

Diazepam alters the shape of alpha oscillations recorded from human cortex using EEG.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: g-opie/Diazepam-and-alpha-shape (no license)

Status: code verified, 32 files readable, 13 matches

[6319] doi:10.1186/s12974-026-03739-w [paper, repository]

Sex specific effects of adoptive Tregs transfer on the brain and periphery in maternal immune activation offspring rescuing immune dysregulation.

Journal: Journal of neuroinflammation

Authors' code: ciernialab/Rose-et-al.-2026 (no license)

Status: code verified, 9 files readable, 8 matches

[6320] doi:10.1242/dmm.052509 [paper, repository]

Inhibition of Cxcr4 chemokine receptor signaling improves habituation learning in a zebrafish model of neurofibromatosis.

Journal: Disease models & mechanisms

Authors' code: zebrafishexplorer.zib.de/home (no license), owenrandlett/Z-Brain (no license)

Status: code verified, 7 files readable, 4 matches

[6321] doi:10.1371/journal.pbio.3003661 [paper, data]

Cortisol treatment impairs path integration and alters grid-like representations in the male human entorhinal cortex.

Journal: PLoS biology

Status: data only, 1 dataset cited

[6322] doi:10.1371/journal.pbio.3003693 [paper, repository]

Thalamic reticular neurons provide cell type-specific modulation of sound processing in the auditory thalamus.

Journal: PLoS biology

Authors' code: Zenodo 18601673 (MIT)

Status: code verified, 80 files readable, 6 matches

[6323] doi:10.1371/journal.pcbi.1014038 [paper, repository]

Fast and accessible morphology-free functional fluorescence imaging analysis.

Journal: PLoS computational biology

Authors' code: stradaa/GraFT-Application-Dev (no license), stradaa/GraFT-App (no license), stradaa/GraFT-L1-Compression-Code (MIT)

Status: code verified, 254 files readable, 10 matches

[6324] doi:10.1371/journal.pcbi.1014074 [paper, repository]

Interpretable integration of unpaired multi-omics for Alzheimer's diagnosis via cross-modal transformer reconstruction.

Journal: PLoS computational biology

Authors' code: bowei-color/AE-Trans (Apache-2.0)

Status: code verified, 3 files readable, 4 matches

[6325] doi:10.1371/journal.pone.0343614 [paper, repository]

pH-dependent structural dynamics of neuropeptide Y in aqueous solution.

Journal: PloS one

Authors' code: maltesie/bridge2 (no license), Zenodo 14069542 (CC-BY-4.0)

Status: code verified, 27 files readable, 4 matches

[6326] doi:10.3389/fgene.2026.1742595 [paper, repository]

An in silico protocol for predicting genetic biomarkers in rare diseases: a case study in sporadic amyotrophic lateral sclerosis.

Journal: Frontiers in genetics

Authors' code: Zenodo 18789012 (CC-BY-4.0)

Status: code verified, 3 files readable, 13 matches

[6327] doi:10.3389/fneph.2026.1608421 [paper, repository]

A behavioral and electrophysiological investigation of conflict monitoring in cystinosis (CTNS gene mutations) using the flanker paradigm.

Journal: Frontiers in nephrology

Authors' code: DouweHorsthuis (no license)

Status: code verified

[6328] doi:10.3389/fneur.2026.1770629 [paper, data]

Development and internal-external validation of a risk prediction nomogram for secondary myocardial injury in traumatic brain injury.

Journal: Frontiers in neurology

Status: data only, 1 dataset cited

[6329] doi:10.3390/s26061801 [paper, repository]

Characterization of a Spiking Convolutional Processor for FPGA.

Journal: Sensors (Basel, Switzerland)

Authors' code: RTC-research-group/SCNN_LIFrow (GPL-3.0)

Status: code verified, 27 files readable, 4 matches

[6330] doi:10.7717/peerj.20899 [paper, data]

Transcriptomic and metabolomic profiling reveals media- and host-dependent responses to <i>Staphylococcus hominis</i> in cell models.

Journal: PeerJ

Status: data only, 2 datasets cited

Wednesday, 11 March 2026 (38 papers)

[6331] doi:10.1002/adhm.202504889 [paper, repository]

Mapping the Cerebral Organoid Landscape: A Systematic Review of Preclinical 3D Models in Neuroscience.

Journal: Advanced healthcare materials

Authors' code: MaikTungsten/OrganoidMap (no license), Zenodo 18420242 (CC-BY-4.0), organoidmap.cs.uni-tuebingen.de (no license)

Status: code verified, 4,000 files readable

[6332] doi:10.1002/ibra.70015 [paper, repository]

Impact of early dexmedetomidine administration on short- and long-term outcomes in critically traumatic brain injury patients: A retrospective study using the MIMIC-IV database.

Journal: Ibrain

Authors' code: ningyile/BDMCC_APP (no license)

Status: empty repository, 1 file readable

[6333] doi:10.1007/s00429-025-03070-9 [paper, repository]

Predicting brain volumes from anthropometric and demographic features: insights from UK biobank neuroimaging data.

Journal: Brain structure & function

Authors' code: KNazarzadeh/brainsize (no license)

Status: dead link

[6334] doi:10.1016/j.isci.2026.115329 [paper, repository]

Brain metastases converge on shared geometric architecture and transcriptomic landscape yet remain distinct from gliomas.

Journal: iScience

Authors' code: nibr-lab/Brain_Mets_FD_Lac_Manuscript (no license), nibr671lab/Brain_Mets_FD_Lac_Manuscript).•Any (no license)

Status: code verified, 12 files readable, 17 matches

[6335] doi:10.1016/j.isci.2026.115336 [paper, data]

Neural correlates of individual differences in motor learning under reinforcement contexts.

Journal: iScience

Status: code on request, 1 dataset cited

[6336] doi:10.1021/acsomega.5c09368 [paper, repository]

Structure-Based and AI-Assisted Identification of AGPS Inhibitors for Glioma via Integrated Docking, Molecular Dynamics, and Binding Affinity Screening.

Journal: ACS omega

Authors' code: naveen-joy-18/Feature-driven-AI-Guided-Drug-Repurposing-Pipeline-for-AGPS-Targeted-Glioma-Therapy- (no license)

Status: code verified, 6 files readable, 19 matches

[6337] doi:10.1038/s41586-026-10191-6 [paper, data]

Intestinal interoceptive dysfunction drives age-associated cognitive decline.

Journal: Nature

Status: data only, 1 dataset cited

[6338] doi:10.1038/s41586-026-10214-2 [paper, repository]

Multidimensional profiling of heterogeneity in supratentorial ependymomas.

Journal: Nature

Authors' code: Zenodo 17871734 (MIT), filbinlab/multidimensional_stepn (MIT)

Status: code verified, 231 files readable, 30 matches

[6339] doi:10.1038/s41593-026-02205-3 [paper, repository]

Competitive interactions shape mammalian brain network dynamics and computation.

Journal: Nature neuroscience

Authors' code: Imperial-MIND-lab/integrated-info-decomp (BSD-3-Clause), netneurolab/conn2res (BSD-3-Clause), Hana-Ali/competitive-cooperative-hopf (no license), sites.google.com/site/bctnet (no license), neurospin/pypreclin (CECILL-2.1), jlizier/jidt (gpl)

Status: code verified, 768 files readable, 2 matches

[6340] doi:10.1038/s41598-026-42998-8 [paper, data]

A dual-branch deep learning framework for emotion recognition from EEG signals.

Journal: Scientific reports

Status: data only, 4 datasets cited

[6341] doi:10.1038/s41598-026-43346-6 [paper, repository]

Correcting model error bias in estimations of neuronal dynamics from time series observations.

Journal: Scientific reports

Authors' code: IanWilliams01/driven-hybrid-reservoir-computing (no license)

Status: code verified, 13 files readable, 5 matches

[6342] doi:10.1038/s41598-026-43431-w [paper, data]

A deep-SVM hybrid framework with enhanced EEG feature engineering and SHAP-based explainability for Alzheimer's classification.

Journal: Scientific reports

Status: data only, 3 datasets cited

[6343] doi:10.1038/s41598-026-43466-z [paper, repository]

Cardiorespiratory fitness is differentially associated with motor cortex laterality in middle-aged and older adults.

Journal: Scientific reports

Authors' code: osubbal/fMRI-HAROLD-CRF_JCloud (CC0-1.0)

Status: empty repository, 2 files readable

[6344] doi:10.1038/s41598-026-43755-7 [paper, repository]

Development of head-to-head and longitudinal CycleGAN algorithm for MRI harmonization: validation in follow-up MRI evaluation in patients with brain metastasis.

Journal: Scientific reports

Authors' code: Iceberg6618/CycleGAN-Harmonization (no license)

Status: code verified, 13 files readable, 4 matches

[6345] doi:10.1038/s42003-026-09834-1 [paper, repository]

Distinct perceptual and conceptual representations of natural actions along the lateral and dorsal visual streams.

Journal: Communications biology

Authors' code: OSF am3qn (no license)

Status: code verified, 1 file readable

[6346] doi:10.1038/s44271-026-00436-5 [paper, repository]

Behavioral evidence for the hierarchical execution of sequential movements.

Journal: Communications psychology

Authors' code: figshare 31169632 (CC-BY-4.0)

Status: code verified, 22 files readable, 5 matches

[6347] doi:10.1073/pnas.2519586123 [paper, repository]

Personalized functional topography-based multisite brain age prediction modeling reveals divergent neurodevelopment in major depression.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: ALICE1029/topography_MDD (no license)

Status: code verified, 61 files readable, 2 matches

[6348] doi:10.1073/pnas.2520834123 [paper, data]

Quantum-inspired entanglement between collaborating brains during human memory encoding.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Status: data only, 1 dataset cited

[6349] doi:10.1093/braincomms/fcag077 [paper, repository]

Roles of beta synchronization for motor skill acquisition change after stroke.

Journal: Brain communications

Authors' code: gitlab.rrz.uni-hamburg.de/xeni/beta-synchronisation-after-stroke (no license)

Status: code verified, 11 files readable, 8 matches

[6350] doi:10.1093/braincomms/fcag079 [paper, repository]

Machine learning-based combination of the central vein sign, cortical lesions and paramagnetic rim lesions: a web-based tool for the diagnosis of multiple sclerosis.

Journal: Brain communications

Authors' code: maxencewynen/MS-Diagnostic-Tool-UCLouvain (no license)

Status: code verified, 9 files readable, 7 matches

[6351] doi:10.1097/jom.0000000000003701 [paper, repository]

Mortality Update of a US Cohort of Workers in Petrochemical and Refinery Operations.

Journal: Journal of occupational and environmental medicine

Authors' code: links.lww.com/jom/c424 (no license)

Status: code verified

[6352] doi:10.1111/bpa.70092 [paper, data]

Molecular and clinical features of a Japanese medulloblastoma cohort: Subgroup-specific prognostic stratification using economical/accessible diagnostic methods.

Journal: Brain pathology (Zurich, Switzerland)

Status: data only, 1 dataset cited

[6353] doi:10.1126/sciadv.adz1686 [paper, data]

Persistent microglial activation following neonatal CMV infection mediates neurodegeneration.

Journal: Science advances

Status: data only, 1 dataset cited

[6354] doi:10.1162/imag.a.1154 [paper, repository]

Evolutionary signatures in deep white matter architecture: A comparative study of humans and chimpanzees.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: framagit.org/cpoupon/gkg (other), neurospin/point-cloud-pattern-mining (no license), Zenodo 7253494 (other-open)

Status: code verified, 2,056 files readable, 7 matches

[6355] doi:10.1371/journal.pcbi.1014024 [paper, repository]

Social familiarity strengthens neural and vocal responses to conspecific calls in zebra finches.

Journal: PLoS computational biology

Authors' code: vallentinlab/SocialContext_calls_HVC (no license)

Status: code verified, 73 files readable, 7 matches

[6356] doi:10.1371/journal.pone.0343722 [paper, repository]

Comprehensive methodology for sample enrichment in EEG biomarker studies for Alzheimer's risk classification.

Journal: PloS one

Authors' code: GRUNECO/eeg_harmonization (no license), GRUNECO/Data_analysis_ML_Harmonization_Proyect (no license)

Status: code verified, 126 files readable, 3 matches

[6357] doi:10.1371/journal.ppat.1014044 [paper, data]

Schistosome esophageal gland factor MEG-8.2 drives host cell lysis and interacts with host immune proteins.

Journal: PLoS pathogens

Status: data only, 1 dataset cited

[6358] doi:10.3389/fnagi.2026.1742371 [paper, repository]

Cross-sectional and longitudinal functional network alterations associated with subthreshold depressive symptoms in healthy older adults.

Journal: Frontiers in aging neuroscience

Authors' code: thomasyeolab/cbig (MIT)

Status: code verified, 2,000 files readable

[6359] doi:10.3389/fncom.2026.1745836 [paper, repository]

Role of spinal sensorimotor circuits in triphasic muscle command: a simulation approach using goal exploration process.

Journal: Frontiers in computational neuroscience

Authors' code: cattaert/rgep (no license)

Status: code verified, 42 files readable, 5 matches

[6360] doi:10.3389/fneur.2026.1753639 [paper, data]

Early prophylactic heparin use is associated with reduced mortality in patients with non-traumatic subarachnoid hemorrhage.

Journal: Frontiers in neurology

Status: data only, 2 datasets cited

[6361] doi:10.3390/bioengineering13030323 [paper, repository]

Scale-Free Neurodynamics as Functional Fingerprint of Brain Regions.

Journal: Bioengineering (Basel, Switzerland)

Authors' code: armonaite/PowerLawAnalysis (no license)

Status: code verified, 8 files readable

[6362] doi:10.3390/life16030458 [paper]

Short-Term Fascial Circulation Exercise Modulates Task-Related Prefrontal Oxygenation During Executive Tasks in Older Women: An fNIRS Pilot Study.

Journal: Life (Basel, Switzerland)

Status: code on request

[6363] doi:10.34133/csbj.0010 [paper, repository]

DuAL-Net: A Dual-Network Approach for Alzheimer's Disease Risk Prediction Using <i>APOE</i>-Centered Regional Whole-Genome Sequencing Data.

Journal: Computational and structural biotechnology journal

Authors' code: taehojo/DuAL-Net (no license), jolab.ai/dualnet (no license)

Status: code verified, 3 files readable, 6 matches

[6364] doi:10.64898/2026.03.09.710483 [paper, repository]

Multimodal reference brain atlas of adult <i>Danionella cerebrum</i>

Journal: bioRxiv (preprint)

Authors' code: gin.g-node.org/danionella/kadobianskyi_et_al_2026 (CC-BY-NC-SA-4.0)

Status: code verified, 4 files readable, 2 matches

[6365] doi:10.64898/2026.03.10.26348006 [paper, repository]

AI-Based Pipeline for the Segmentation of White Matter Hypoattenuations in CT Scans: A Design-Choice Validation Study

Journal: medRxiv (preprint)

Authors' code: bjin96/ct-processing (no license)

Status: code verified, 25 files readable, 2 matches

[6366] doi:10.64898/2026.03.10.710798 [paper, repository]

Exploring Links between Brain Image-Derived Phenotypes and Accelerometer-Measured Physical Activity in the UK Biobank

Journal: bioRxiv (preprint)

Authors' code: Dongliang-JHU/PA-Brain-IDPs-UKB (no license)

Status: code verified

[6367] doi:10.64898/2026.03.10.710908 [paper, repository]

Toroidal topology of grid-cell activity precedes spatial navigation during development

Journal: bioRxiv (preprint)

Authors' code: OpatzLab/HanganuOpatzToolbox (GPL-3.0)

Status: code verified, 596 files readable, 8 matches

[6368] doi:10.7759/cureus.105040 [paper, repository]

Divergent Mechanisms of Antidepressant Efficacy: A Unified Computational Comparison of Synaptogenesis, Stabilization, and Tonic Inhibition in a Model of Depression.

Journal: Cureus

Authors' code: cheungngo/Divergent-Mechanisms-of-Antidepressant-Efficacy (no license)

Status: code verified, 3 files readable, 10 matches

Tuesday, 10 March 2026 (44 papers)

[6369] doi:10.1007/s10827-026-00924-x [paper, repository]

Astrocyte-induced dynamics of a pyramidal cell with a dendrite-connected astrocyte.

Journal: Journal of computational neuroscience

Authors' code: gitlab.ics.muni.cz/ndteam/gamu/pc-astrocyte (MIT)

Status: code verified, 14 files readable, 1 match

[6370] doi:10.1016/j.bbi.2026.106535 [paper, data]

Lipocalin-2 perpetuates postoperative and post-infectious neuroinflammation and anxiety-like behavior.

Journal: Brain, behavior, and immunity

Status: data only, 1 dataset cited

[6371] doi:10.1016/j.bpj.2026.03.019 [paper]

A red-light gate for a cation channel: The conducting state of channelrhodopsin-1 from Chlamydomonas augustae.

Journal: Biophysical journal

Status: code on request

[6372] doi:10.1016/j.taml.2025.100609 [paper, repository]

Hybridndiff-UQ: Uncertainty quantification for hybrid neural differentiable modeling.

Journal: Theoretical and applied mechanics letters

Authors' code: jx-wang-s-group/HybridNDiff-UQ (Apache-2.0)

Status: code verified, 21 files readable

[6373] doi:10.1038/s41398-026-03858-1 [paper]

Multimodal EEG-fNIRS classification as a clinical tool for bipolar disorder diagnosis.

Journal: Translational psychiatry

Status: code on request

[6374] doi:10.1038/s41467-026-68596-w [paper, repository]

Spatial cartography of human thymus enables the geopositioning of lineage transcription factors in rare mimetic thymic epithelial cells.

Journal: Nature communications

Authors' code: UmaSangumathi/mimeTFs (no license), Zenodo 17851510 (CC-BY-4.0)

Status: code verified, 9 files readable, 15 matches

[6375] doi:10.1038/s41467-026-69853-8 [paper, repository]

Transcranial focused ultrasound induces source localizable cortical activation in resting state humans when applied concurrently with transcranial electric stimulation.

Journal: Nature communications

Authors' code: bfinl/tFUS-ESI (MIT)

Status: code verified, 8 files readable, 9 matches

[6376] doi:10.1038/s41467-026-70303-8 [paper, repository]

Behavioral screening defines the molecular Parkinsonism-related subgroups in Drosophila.

Journal: Nature communications

Authors' code: verstrekenlab/drosophila-Parkinsonism-subgroups (no license), Zenodo 18032710 (CC-BY-4.0)

Status: code verified, 50 files readable, 16 matches

[6377] doi:10.1038/s41467-026-70364-9 [paper, repository]

The role of amygdala GABA neurons in controlling stress and reproduction in female mice.

Journal: Nature communications

Authors' code: mv-kr/MePD_GABA (CC0-1.0)

Status: code verified, 24 files readable, 17 matches

[6378] doi:10.1038/s41467-026-70715-6 [paper, data]

Identification of altered immune landscape at single-cell resolution in NSCLC brain metastasis and its association with poor immune checkpoint inhibitor responses.

Journal: Nature communications

Status: data only, 3 datasets cited

[6379] doi:10.1038/s41593-026-02207-1 [paper, repository]

Neuronal tuning aligns dynamically with object and texture manifolds across the visual hierarchy.

Journal: Nature neuroscience

Authors' code: Animadversio/Dynamic-Neuron-GAN-Alignment (MIT)

Status: code verified, 32 files readable, 9 matches

[6380] doi:10.1038/s41593-026-02234-y [paper, repository]

Persistent interferon signaling causes sensory neuron plasticity and pain before and during arthritis.

Journal: Nature neuroscience

Authors' code: sccamel.readthedocs.io (no license)

Status: code verified

[6381] doi:10.1038/s41597-026-06971-4 [paper, repository]

Human neuronal differentiation under Aβ exposure: a single-cell transcriptomic and epigenomic dataset.

Journal: Scientific data

Authors' code: TranslationalBioinformaticsUnit/Human-neuronal-differentiation-under-AB-exposure-a-single-cell-transcriptomic-and-epigenomic-datase (GPL-3.0)

Status: code verified, 7 files readable, 10 matches

[6382] doi:10.1038/s41598-026-35627-x [paper, repository]

Distilling population specific expertise into a unified model for generalizable brain tumor segmentation.

Journal: Scientific reports

Authors' code: AhmeddEmad7/Brain-Tumor-Segmentation-Advancing-Generalizability (no license)

Status: code verified, 16 files readable, 17 matches

[6383] doi:10.1038/s41598-026-41532-0 [paper, repository]

Prediction, syntax and semantic grounding in the brain and large language models.

Journal: Scientific reports

Authors' code: nikolakoe/Prediction_Syntax_Semantic_Grounding (MIT)

Status: code verified, 7 files readable, 6 matches

[6384] doi:10.1038/s41598-026-42518-8 [paper, data]

Fingolimod normalizes metabolic signatures associated with synaptic plasticity and memory in APP/PS1 model: Sphingosine-1-phosphate receptor a therapeutic target for Alzheimer's.

Journal: Scientific reports

Status: data only, 1 dataset cited

[6385] doi:10.1038/s41598-026-43529-1 [paper, repository]

A spiking neural network inspired by neuroscience and psychology for Western mode- and key-conditioned music learning and composition.

Journal: Scientific reports

Authors' code: lqnankai/Music-Dataset (MIT), braincog-x/brain-cog (Apache-2.0)

Status: code verified, 547 files readable, 1 match

[6386] doi:10.1038/s43856-026-01454-4 [paper, data]

An interpretable machine learning model for predicting prognosis of medulloblastoma integrating genetic and clinical features.

Journal: Communications medicine

Status: data only, 1 dataset cited

[6387] doi:10.1038/s43856-026-01518-5 [paper, repository]

Machine learning-based identification of abnormal functional connectivity in obesity across different metabolic states.

Journal: Communications medicine

Authors' code: yuan410/obesitymeta (Apache-2.0), figshare 30351418 (CC-BY-4.0)

Status: code verified, 4 files readable, 5 matches

[6388] doi:10.1073/pnas.2521539123 [paper, repository]

Coexpression among eastern oyster host and microbiome genes suggests coordinated regulation of calcifying fluid chemistry.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: Andrea-Unzueta-Martinez/oyster-host-microbiome-transcriptomics (no license)

Status: code verified, 10 files readable, 9 matches

[6389] doi:10.1073/pnas.2528913123 [paper, repository]

Sleep deprivation exhibits an age-dependent effect on infraslow global brain activity.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: psu-mcnl/SD_brain_activity (no license), Zenodo 15641972 (CC-BY-4.0)

Status: code verified, 4 files readable

[6390] doi:10.1073/pnas.2537058123 [paper, data]

Macrophage-glia interactions regulate immune damage to enteric neurons during West Nile virus infection.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Status: data only, 3 datasets cited

[6391] doi:10.1093/braincomms/fcag075 [paper, repository]

Intracellular fluid accumulation underlies brain volume increases in early Alzheimer's disease.

Journal: Brain communications

Authors' code: mkassinopoulos/2026_multib_paper_AlfaPLUS (MIT)

Status: code verified, 17 files readable, 4 matches

[6392] doi:10.1113/jp289290 [paper, repository]

Robust activity-dependent mitochondrial calcium dynamics at the AIS is dispensable for action potential generation.

Journal: The Journal of physiology

Authors' code: Kolelab/mtGCaMP (no license), microns-explorer.org (no license)

Status: code verified, 18 files readable

[6393] doi:10.1162/imag.a.1129 [paper, data]

Deep learning interpretability in neuroimaging: A comprehensive survey and methodological recommendations.

Journal: Imaging neuroscience (Cambridge, Mass.)

Status: data only, 1 dataset cited

[6394] doi:10.1162/imag.a.1152 [paper, repository]

Brain patterns linked to neuropsychiatric genetic risk mirror those seen in disease.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: getian107/PRScs (MIT), jianyang-lab/gsmr (no license)

Status: code verified, 12 files readable

[6395] doi:10.1162/imag.a.1153 [paper, repository]

TRAMFIX: TRavelling Across Melbourne for FIXel-based analysis (a reproducibility and reliability study).

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: remikamito/TRAMFIX (no license)

Status: code verified, 9 files readable, 5 matches

[6396] doi:10.1186/s12859-026-06410-6 [paper, data]

Design of a configurable SoC for Alzheimer's disease detection based on multimodal signals.

Journal: BMC bioinformatics

Status: data only, 1 dataset cited

[6397] doi:10.1186/s12916-026-04787-y [paper, data]

A human-derived Bacteroides strain attenuates depressive-like behavior in a rat model of social defeat-induced stress.

Journal: BMC medicine

Status: data only, 1 dataset cited

[6398] doi:10.1186/s12920-025-02190-9 [paper]

Apolipoprotein D downregulation in OSCC: multi-database validation and clinical significance.

Journal: BMC medical genomics

Status: data only

[6399] doi:10.1186/s13024-026-00936-2 [paper, data]

Altered trafficking of Kv1-Kvβ2 leads to neuronal hyperexcitability and memory deficits in amyloid-β pathology.

Journal: Molecular neurodegeneration

Status: data only, 1 dataset cited

[6400] doi:10.1186/s40035-026-00536-6 [paper, data]

Gut-initiated alpha synuclein fibrils drive parkinsonism phenotypes: temporal mapping of REM sleep behavior disorder-like and other non-motor symptoms.

Journal: Translational neurodegeneration

Status: data only, 3 datasets cited

[6401] doi:10.1371/journal.pbio.3003684 [paper, repository]

The retrieval of previously learned motor memories is facilitated by the reinstatement of default mode network manifold structures.

Journal: PLoS biology

Authors' code: Zenodo 18612771 (MIT), alirzar/motorsaving (MIT), danjgale/surfplot (BSD-3-Clause)

Status: code verified, 74 files readable, 13 matches

[6402] doi:10.1371/journal.ppat.1014040 [paper, data]

PDE4B deficiency aids macrophage differentiation and contributes to Cryptococcus neoformans brain infection.

Journal: PLoS pathogens

Status: data only, 1 dataset cited

[6403] doi:10.1523/eneuro.0461-25.2026 [paper, repository]

Representation Biases: Variance Is Not Always a Good Proxy for Importance.

Journal: eNeuro

Authors' code: gist.github.com/b6541019ef4cf2988669ab44aa82460b (no license)

Status: code verified, 1 file readable, 1 match

[6404] doi:10.21203/rs.3.rs-9043045/v1 [paper, data]

Early mitochondrial gene dysregulation precedes motor neuron degeneration in genomically humanised FUS mutant mice

Journal: Research Square (preprint)

Status: data only, 1 dataset cited

[6405] doi:10.3389/fnsys.2026.1753562 [paper, data]

When the gatekeeper falls: developmental vulnerability of the thalamic reticular nucleus in neonatal and pediatric hypoxic-ischemic brain injury.

Journal: Frontiers in systems neuroscience

Status: data only, 1 dataset cited

[6406] doi:10.3390/e28030310 [paper, data]

Entropy-Based Dual-Teacher Distillation for Efficient Motor Imagery EEG Classification.

Journal: Entropy (Basel, Switzerland)

Status: data only, 1 dataset cited

[6407] doi:10.64898/2026.03.09.26347914 [paper, repository]

Multimodal Ageing Biomarkers and Plasma Proteomic Signatures Associated with All-Cause Mortality

Journal: medRxiv (preprint)

Authors' code: marioni-group/Mortality_Biomarkers_LBC1936 (GPL-3.0), lothianbirthcohorts.github.io/longitudinal-g-models (no license)

Status: code verified, 10 files readable, 19 matches

[6408] doi:10.64898/2026.03.09.26347973 [paper, repository]

Characterising the motif composition and allele length distribution of <i>ZFHX3</i> GGC repeat expansions in amyotrophic lateral sclerosis

Journal: medRxiv (preprint)

Authors' code: mq-mnd/grp_williams/zfhx3_analysis_publication_2026 (no license)

Status: code verified, 3 files readable, 1 match

[6409] doi:10.64898/2026.03.09.710558 [paper, repository]

Multi-task fMRI outperforms resting-state fMRI for revealing task-invariant organization of the human brain

Journal: bioRxiv (preprint)

Authors' code: DiedrichsenLab/Functional_Fusion (no license), carobellum/RestMultitask (MIT), DiedrichsenLab/HierarchBayesParcel (MIT), DiedrichsenLab/cortico_cereb_connectivity (MIT), diedrichsenlab/MultiTaskBattery (MIT)

Status: code verified, 247 files readable, 10 matches

[6410] doi:10.64898/2026.03.09.710596 [paper, repository]

Infant gut microbiomes contribute to metabolic states that impact brain function

Journal: bioRxiv (preprint)

Authors' code: Zenodo 17652611 (CC-BY-4.0), victoriapascal/gutsmash (AGPL-3.0), medema-group/BiG-SCAPE (AGPL-3.0), morgannprice/PaperBLAST (GPL-3.0), zqfang/GSEApy (BSD-3-Clause)

Status: code verified, 570 files readable, 19 matches

[6411] doi:10.7554/elife.105081 [paper, repository]

Movie reconstruction from mouse visual cortex activity.

Journal: eLife

Authors' code: lRomul/sensorium (MIT), Joel-Bauer/movie_reconstruction_code (MIT)

Status: code verified, 44 files readable, 12 matches

[6412] doi:10.7554/elife.107867 [paper, repository]

Peripheral anatomy and central connectivity of proprioceptive sensory neurons in the &lt;i&gt;Drosophila&lt;/i&gt; wing.

Journal: eLife

Authors' code: ellenlesser/lesser_elife_2025 (MIT)

Status: code verified, 4 files readable, 2 matches

Monday, 9 March 2026 (58 papers)

[6413] doi:10.1002/advs.202514828 [paper, data]

Paving the Way to Elucidate Hg's Role in Tumorigenesis.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Status: data only, 1 dataset cited

[6414] doi:10.1002/advs.202515887 [paper, repository]

An Open-Source Pipeline for Calcium Imaging and All-Optical Physiology in Human Stem Cell-Derived Neurons.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Authors' code: fdrgsp/micromanager-gui (BSD-3-Clause), fdrgsp/cali (BSD-3-Clause)

Status: code verified, 229 files readable, 19 matches

[6415] doi:10.1007/s00221-026-07266-1 [paper, data]

Working memory load and search efficiency in conventional monitor-based 2D versus 3D virtual settings: analysis of response times and parietal induced alpha activity in a modified Sternberg task.

Journal: Experimental brain research

Status: data only, 1 dataset cited

[6416] doi:10.1007/s00787-025-02957-6 [paper, repository]

Neural responses to error in youth: the impact of social context, anxiety, and worry.

Journal: European child & adolescent psychiatry

Authors' code: NIMH-SDAN/Neural-Response_to_Error_Social-Context (no license)

Status: empty repository, 1 file readable

[6417] doi:10.1016/j.dcn.2026.101706 [paper, repository]

BIBSNet: A deep learning baby image brain segmentation network for MRI scans.

Journal: Developmental cognitive neuroscience

Authors' code: Zenodo 7106148 (other-open)

Status: code verified, 2 files readable

[6418] doi:10.1016/j.neuron.2026.01.018 [paper, repository]

DCPS modulates TDP-43-linked neurodegeneration through P-body-mediated RNA decay.

Journal: Neuron

Authors' code: yye24/jhu2025 (no license), mingming-cgz/artr-seq (MIT)

Status: code verified, 8 files readable, 1 match

[6419] doi:10.1016/j.xcrm.2026.102655 [paper, repository]

An integrative multi-omics approach identifies microbiome alterations linked to pathological and behavioral features in autism spectrum disorder.

Journal: Cell reports. Medicine

Authors' code: figshare 31143223 (CC-BY-4.0), ggseg/ggsegExtra (other)

Status: code verified, 162 files readable, 10 matches

[6420] doi:10.1016/j.xpro.2026.104418 [paper]

Protocol for identifying surface membrane proteins and their associated proteome from mouse cortical neuron cultures by in situ biotinylation.

Journal: STAR protocols

Status: code on request

[6421] doi:10.1016/j.ynstr.2026.100791 [paper, data]

USP11 drives stress-induced synaptic structural deficits and depression-like behaviors through GSK3β/mTOR signaling.

Journal: Neurobiology of stress

Status: data only, 1 dataset cited

[6422] doi:10.1021/acs.jctc.5c01852 [paper, repository]

Modal Backflow Neural Quantum States for Anharmonic Vibrational Calculations.

Journal: Journal of chemical theory and computation

Authors' code: Zenodo 17552425 (CC-BY-4.0)

Status: code verified, 28 files readable, 5 matches

[6423] doi:10.1038/s41467-026-69944-6 [paper, repository]

Multi-modal dissection of cell-type specific TDP-43 pathology in the motor cortex.

Journal: Nature communications

Authors' code: timoast/sinto (MIT), DanzerLab/Ruf_et_al_2026 (no license)

Status: code verified, 216 files readable, 20 matches

[6424] doi:10.1038/s41467-026-70232-6 [paper, repository]

Gene expression dynamics of human and mouse craniofacial development at the single-cell level.

Journal: Nature communications

Authors' code: cotneylab/craniofacial_snrna (CC0-1.0), Zenodo 18246448 (CC0-1.0)

Status: code verified, 82 files readable, 38 matches

[6425] doi:10.1038/s41467-026-70289-3 [paper, repository]

Directional dynamics in the entorhinal cortex of male mice driven by behavioral constraints.

Journal: Nature communications

Authors' code: zhoupc/OASIS_matlab (GPL-3.0), RuojinLiu/assisted_movement (no license)

Status: code verified, 948 files readable, 4 matches

[6426] doi:10.1038/s41467-026-70326-1 [paper, repository]

Selective control of prefrontal neural timescales by parietal cortex.

Journal: Nature communications

Authors' code: codeocean:0814945 (no license)

Status: code found, still to be checked

[6427] doi:10.1038/s41467-026-70375-6 [paper, repository]

Ribosomal modifications are associated with mesenchymal fate selection in the neural crest lineage.

Journal: Nature communications

Authors' code: ipoverennaya/ribo_modification_paper (no license)

Status: code verified, 3 files readable, 4 matches

[6428] doi:10.1038/s41593-026-02219-x [paper, repository]

A neural signature of adaptive mentalization.

Journal: Nature neuroscience

Authors' code: ruffgroup/neural_signature_of_mentalization (no license)

Status: code verified, 52 files readable, 18 matches

[6429] doi:10.1038/s41598-026-39944-z [paper, repository]

InFoRM: a unified inverse and forward model for sensorimotor control.

Journal: Scientific reports

Authors' code: kimbostroem/kbstat (MIT)

Status: code verified, 44 files readable, 4 matches

[6430] doi:10.1038/s41598-026-42094-x [paper, repository]

Bilingualism modulates functional connectivity induced by a domain-general artificial grammar learning task.

Journal: Scientific reports

Authors' code: OSF 4qkfd (no license)

Status: code verified, 3 files readable, 3 matches

[6431] doi:10.1038/s41598-026-42970-6 [paper, repository]

PS-SNN: pattern separation learning for expandable spiking neural networks in class-incremental learning.

Journal: Scientific reports

Authors' code: image-net.org (no license)

Status: code verified

[6432] doi:10.1038/s41598-026-43329-7 [paper, data]

Hybrid Aquila optimizer-Harris Hawks optimization for CNN hyperparameter tuning in brain tumor classification.

Journal: Scientific reports

Status: data only, 1 dataset cited

[6433] doi:10.1038/s41598-026-43616-3 [paper, data]

MM FD ConvFormer multimodal frequency aware deformable CNN transformer network for robust brain tumor classification.

Journal: Scientific reports

Status: data only, 2 datasets cited

[6434] doi:10.1038/s42003-026-09793-7 [paper]

Neuronal plasticity during motor rehabilitation training after spinal cord injury.

Journal: Communications biology

Status: code on request

[6435] doi:10.1038/s44400-026-00066-y [paper, repository]

A high-throughput, quantitative platform using 2D dissociated human cerebral organoids to model neuroinflammation in Alzheimer's disease.

Journal: NPJ dementia

Authors' code: elimlab/hsv1-bulk (no license)

Status: code verified, 2 files readable, 4 matches

[6436] doi:10.1073/pnas.2505464123 [paper, repository]

Opioid-specific brain connectivity dynamics distinguish analgesia from secondary effects: Studies in male mice.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: Zenodo 10286698 (CC-BY-4.0), Zenodo 10401165 (CC-BY-4.0)

Status: code verified, 11 files readable

[6437] doi:10.1073/pnas.2516904123 [paper, repository]

Divergent BLA engram circuits orchestrate social preference dynamics in bystander male mice with self-experienced stress.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: BehavioralLAB/Fiberphotometry (no license)

Status: code verified, 1 file readable

[6438] doi:10.1073/pnas.2524335123 [paper, data]

Substance P in the lateral hypothalamic area regulates binge-like eating behaviors in mice.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Status: data only, 1 dataset cited

[6439] doi:10.1080/07853890.2026.2638047 [paper, data]

Skin hypersensitivity in chronic cough patients: symptom profiles and psychosomatic correlates.

Journal: Annals of medicine

Status: data only, 1 dataset cited

[6440] doi:10.1093/braincomms/fcag041 [paper]

Exercise enhances hippocampal-cortical ripple interactions in the human brain.

Journal: Brain communications

Status: code on request

[6441] doi:10.1093/braincomms/fcag045 [paper, repository]

Examining neuroimaging biomarkers, plasma biomarkers and cognitive functions in patients with recovered COVID-19 infection: a multicentre study using 7T MRI.

Journal: Brain communications

Authors' code: jinghangli98/wmh_seg (no license), pyushkevich/ashs (GPL-3.0)

Status: code verified, 57 files readable

[6442] doi:10.1093/braincomms/fcag073 [paper, repository]

Cultured &lt;i&gt;ex vivo&lt;/i&gt; human brain tissue maintains cell-type transcriptional identities.

Journal: Brain communications

Authors' code: jpmcginnis/HumanAAVProject (no license)

Status: code verified, 6 files readable, 1 match

[6443] doi:10.1093/braincomms/fcag074 [paper, repository]

Plasma p-tau217 and glucose metabolism correlate in neocortical association areas in Alzheimer's disease.

Journal: Brain communications

Authors' code: lnkoenig/ptau-217-and-FDG-PET-AD-official-copy (no license), lnkoenig/ptau-217-and-FDG-PET-AD—official-copy (no license)

Status: dead link

[6444] doi:10.1162/imag.a.1159 [paper]

Sex and age differences in brain metabolism and cognition in adolescents.

Journal: Imaging neuroscience (Cambridge, Mass.)

Status: code on request

[6445] doi:10.1162/imag.a.1160 [paper, repository]

From surface to depth: Using deep learning to predict striatal fMRI reward signaling from EEG.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: naherzog/DLEEGfMRI (no license)

Status: code verified, 7 files readable, 4 matches

[6446] doi:10.1186/s10194-026-02304-3 [paper, data]

Genetic subtraction reveals divergent pathways and targets in anxiety-related and anxiety-independent TMD.

Journal: The journal of headache and pain

Status: code on request, 2 datasets cited

[6447] doi:10.1186/s13041-026-01289-z [paper]

Shank3B deficiency disrupts GABAergic synaptic transmission in pyramidal neurons of the medial prefrontal cortex region in autism spectrum disorder.

Journal: Molecular brain

Status: data only

[6448] doi:10.1186/s41065-026-00660-3 [paper, data]

Cardamonin ameliorates neuroinflammation in Parkinson's disease by regulating NF-κB signaling.

Journal: Hereditas

Status: data only, 2 datasets cited

[6449] doi:10.1242/bio.062356 [paper, data]

aPKC and F-actin dynamics promote Hippo pathway polarity in asymmetrically dividing neuroblasts.

Journal: Biology open

Status: data only, 1 dataset cited

[6450] doi:10.1371/journal.pcbi.1012966 [paper, repository]

How the dynamic interplay of cortico-basal ganglia-thalamic pathways shapes the time course of deliberation and commitment.

Journal: PLoS computational biology

Authors' code: CoAxLab/CBGTPy (no license)

Status: code verified, 33 files readable, 8 matches

[6451] doi:10.1371/journal.pcbi.1013958 [paper, repository]

Computing the effects of excitatory-inhibitory balance on neuronal input-output properties.

Journal: PLoS computational biology

Authors' code: AlexDReyes/ReyesPlosCompBio2025 (MIT)

Status: code verified, 4 files readable, 1 match

[6452] doi:10.1371/journal.pcbi.1014001 [paper, repository]

Burst firing creates an attractor in synaptic weight dynamics.

Journal: PLoS computational biology

Authors' code: KJacquerie/Burst-Attractor (no license)

Status: code verified, 42 files readable

[6453] doi:10.1371/journal.pcbi.1014085 [paper, repository]

The integrated information Φ of an integrate and fire network.

Journal: PLoS computational biology

Authors' code: mdanilczuk/IITfire (no license)

Status: code verified, 8 files readable, 1 match

[6454] doi:10.1371/journal.pgph.0005444 [paper, repository]

Mapping dementia research in Indonesia: A scoping review of evidence, gaps, and future directions.

Journal: PLOS global public health

Authors' code: OSF c254b (no license)

Status: code found, still to be checked

[6455] doi:10.1371/journal.pone.0328318 [paper, data]

Education shapes the link between EEG aperiodic components and cognitive aging.

Journal: PloS one

Status: data only, 1 dataset cited

[6456] doi:10.1371/journal.pone.0341774 [paper, data]

Timed image naming evaluation for adults (TIME) using BOSS images.

Journal: PloS one

Status: data only, 1 dataset cited

[6457] doi:10.1371/journal.pone.0343516 [paper, data]

NeuronID: An automatic toolkit for identifying neurons in two-photon calcium imaging data.

Journal: PloS one

Status: data only, 1 dataset cited

[6458] doi:10.1371/journal.pone.0344165 [paper, repository]

Long-term intensive golf training induces reconfiguration of brain structural covariance networks.

Journal: PloS one

Authors' code: russellei/Long-Term-Intensive-Golf-Training-Induces-Reconfiguration-of-brain-structural-covariance-networks (no license)

Status: code verified, 1 file readable

[6459] doi:10.21203/rs.3.rs-8873590/v1 [paper, repository]

Personalising cardiac electrophysiology models from CT and ECG for 3D activation imaging and tissue characterisation

Journal: Research Square (preprint)

Authors' code: CEMRG-publications (no license)

Status: code verified

[6460] doi:10.3389/fnagi.2026.1714063 [paper, data]

Nightly variations in sleep quality and next-day cognitive performance: an in-home study in healthy older adults.

Journal: Frontiers in aging neuroscience

Status: data only, 2 datasets cited

[6461] doi:10.3389/fsurg.2026.1741425 [paper, data]

Construction of a predictive early warning model based on machine learning neural network for prognosis of patients with traumatic brain injury.

Journal: Frontiers in surgery

Status: data only, 1 dataset cited

[6462] doi:10.3390/bioengineering13030315 [paper, data]

From Infancy to Aging: Precise Brain Age Estimation via Hybrid CoTResNet3D and CrossViT Models on T1-Weighted Imaging.

Journal: Bioengineering (Basel, Switzerland)

Status: data only, 2 datasets cited

[6463] doi:10.3390/biomedicines14030610 [paper, data]

Magnesium Transporter SLC41A1 Links Magnesium Homeostasis to NMDA Receptor-Related Synaptic Dysfunction: A Transdiagnostic Therapeutic Target for Neuropsychiatric Disorders.

Journal: Biomedicines

Status: data only, 1 dataset cited

[6464] doi:10.3390/brainsci16030301 [paper, data]

Towards the Development of a Deep Learning Framework Using Adaptive and Non-Adaptive Time-Frequency Features for EEG-Based Depression Therapy Prediction.

Journal: Brain sciences

Status: data only, 1 dataset cited

[6465] doi:10.3390/s26051719 [paper, repository]

EEG and IMU Gait Signal Processing: A Comparative Assessment of the "Reza" Exponential Filter and Classical Filters.

Journal: Sensors (Basel, Switzerland)

Authors' code: Rezapousti/Reza-Filter (MIT)

Status: code verified, 1,069 files readable, 2 matches

[6466] doi:10.3390/s26051730 [paper, repository]

SFE-GAT: Structure-Feature Evolution Graph Attention Network for Motor Imagery Decoding.

Journal: Sensors (Basel, Switzerland)

Authors' code: GaoHSin/SFE-GAT (no license)

Status: code verified, 3 files readable, 4 matches

[6467] doi:10.3758/s13415-026-01417-1 [paper, repository]

Computational signatures of exertion and rest underlie moment-to-moment dynamics of subjective perceptions of effort and fatigue.

Journal: Cognitive, affective & behavioral neuroscience

Authors' code: OSF sb9jf (no license)

Status: code verified, 2 files readable

[6468] doi:10.64898/2026.03.06.709690 [paper, data]

Genetic insights on the mechanisms of human cortical folding

Journal: bioRxiv (preprint)

Status: data only, 1 dataset cited

[6469] doi:10.64898/2026.03.06.710130 [paper, repository]

A flexible quality metric for electrophysiological recordings across brain regions and species

Journal: bioRxiv (preprint)

Authors' code: SteinmetzLab/slidingRefractory (no license)

Status: code verified, 40 files readable, 16 matches

[6470] doi:10.64898/2026.03.08.710351 [paper, data]

Dorsoventral gradient of theta sweeps in medial entorhinal cortex

Journal: bioRxiv (preprint)

Status: code on request, 1 dataset cited

Sunday, 8 March 2026 (4 papers)

[6471] doi:10.1038/s41467-026-70346-x [paper, repository]

Multimodal evidence for hippocampal engagement and modulation by functional connectivity-guided parietal TMS.

Journal: Nature communications

Authors' code: JingjiangLab/Parietal-Hippocampus (no license), Zenodo 18355225 (CC-BY-4.0)

Status: code verified, 130 files readable, 3 matches

[6472] doi:10.1038/s41598-026-42450-x [paper, repository]

FMCL: a transformer-based feature-map classifier learning approach for enhanced brain tumor detection in MRI.

Journal: Scientific reports

Authors' code: Zenodo 18740802 (CC-BY-4.0), pavimounisri-byte/FMCL-Brain-Tumor-MRI (no license)

Status: code verified, 10 files readable, 1 match

[6473] doi:10.1186/s13054-026-05929-7 [paper]

Reporting practices and impact of withdrawal of life-sustaining treatment on outcomes in acute brain injury clinical trials: a literature review and simulation study.

Journal: Critical care (London, England)

Status: code on request

[6474] doi:10.3390/brainsci16030300 [paper, repository]

Source-Free Active Domain Adaptation for Brain Tumor Segmentation via Mamba and Region-Level Uncertainty.

Journal: Brain sciences

Authors' code: ZHW11/SFADA-for-brain-tumor-segmentation (no license)

Status: dead link

Saturday, 7 March 2026 (17 papers)

[6475] doi:10.1002/mrm.70336 [paper, repository]

Offline Reconstruction of Diffusion MRI Acquisitions for Comparison Between Complex PCA-Based and AI-Based Denoising.

Journal: Magnetic resonance in medicine

Authors' code: weconnect.gehealthcare.com (no license), SteenMoeller/NORDIC_Raw (other), Zenodo 3909526 (other-open), spmic-uon/brc_pipeline (no license)

Status: code verified, 267 files readable, 7 matches

[6476] doi:10.1016/j.isci.2026.115272 [paper]

Physical crowding in 3D niche regulates neural stem cell differentiation via Cx43-mediated gap junction communication.

Journal: iScience

Status: code on request

[6477] doi:10.1016/j.isci.2026.115278 [paper, repository]

Sex-specific division of labor in termites is linked to differential brain architecture and foraging gene expression.

Journal: iScience

Authors' code: aroquej/foraging_project_termites (no license)

Status: code verified, 13 files readable

[6478] doi:10.1016/j.ynstr.2026.100788 [paper, data]

Different early-life adversity paradigms have disparate effects on maternal care, neuronal activation, and social behavior in developing mice.

Journal: Neurobiology of stress

Status: data only, 1 dataset cited

[6479] doi:10.1038/s41380-026-03517-3 [paper]

Correction of eIF4E overactivation rescues translatome imbalance and core ASD-like behaviors in valproic acid-induced offspring mice.

Journal: Molecular psychiatry

Status: code on request

[6480] doi:10.1038/s41467-026-69866-3 [paper, repository]

Selective weakening of population-coupled synaptic activity in vivo in a mouse model of amyloid-beta pathology.

Journal: Nature communications

Authors' code: Zenodo 18370193 (CC-BY-4.0)

Status: code verified, 1 file readable, 1 match

[6481] doi:10.1038/s41467-026-70093-z [paper]

Conformal and adhesive gel for stable electrophysiology on hairy animals without shaving.

Journal: Nature communications

Status: code on request

[6482] doi:10.1038/s41467-026-70135-6 [paper, repository]

Neuroimaging subtypes of adolescent sleep insufficiency stratify natural short sleepers from comorbidity or environment driven insufficiency.

Journal: Nature communications

Authors' code: ucl-pond (no license)

Status: code verified

[6483] doi:10.1038/s41467-026-70281-x [paper, repository]

A human cerebral organoid model of West Nile virus encephalitis shows innate immunocompetency.

Journal: Nature communications

Authors' code: Zenodo 18628798 (CC-BY-4.0)

Status: code verified

[6484] doi:10.1038/s41598-026-37933-w [paper, repository]

Gaze dynamics toward familiar and unfamiliar faces in prosopagnosia.

Journal: Scientific reports

Authors' code: OSF hpfng (no license)

Status: code verified, 2 files readable

[6485] doi:10.1038/s41598-026-38351-8 [paper, repository]

Unique phenotypic and T cell receptor characteristics of CD8&lt;sup&gt;+&lt;/sup&gt; T cells accumulated in the brains of Alzheimer's disease mice.

Journal: Scientific reports

Authors' code: ctboughter/AIMS_manuscripts (MIT), ctboughter/AIMS (MIT)

Status: code verified, 38 files readable, 3 matches

[6486] doi:10.1038/s44387-026-00084-4 [paper, repository]

A variational framework for residual-based adaptivity in neural PDE solvers and operator learning.

Journal: NPJ artificial intelligence

Authors' code: Zenodo 18089934 (CC-BY-4.0), jdtoscano94/vrba_variational_residual_based_attention_pinns_operator_learning (no license)

Status: code verified

[6487] doi:10.1093/braincomms/fcag066 [paper, repository]

Ventricular enlargement is associated with early Alzheimer's disease pathophysiology.

Journal: Brain communications

Authors' code: tnl-mcsa/tutorials (no license)

Status: empty repository, 1 file readable

[6488] doi:10.1186/s12987-026-00782-w [paper, data]

Quantifying cerebrospinal fluid flow in pial perivascular spaces of rats.

Journal: Fluids and barriers of the CNS

Status: data only, 1 dataset cited

[6489] doi:10.1186/s13020-026-01348-6 [paper, data]

Phillyrin alleviates Kawasaki disease-induced lung inflammation by inhibiting platelet production through the NLRP3/IL-1β/NF-E2 signaling pathway.

Journal: Chinese medicine

Status: data only, 1 dataset cited

[6490] doi:10.1186/s40478-026-02228-8 [paper, data]

microRNA-132 attenuates inflammation in induced pluripotent stem cell-derived microglia from Alzheimer's disease patients.

Journal: Acta neuropathologica communications

Status: data only, 6 datasets cited

[6491] doi:10.1186/s43556-026-00421-8 [paper, data]

Interaction between transient receptor potential vanilloid 4 and glutamate NMDA receptor subunit 1 mediates endoplasmic reticulum stress and neuroinflammation in postoperative delirium.

Journal: Molecular biomedicine

Status: data only, 1 dataset cited

Friday, 6 March 2026 (55 papers, 5 on this page)

[6492] doi:10.1002/mrm.70330 [paper]

Assessing Measurement Repeatability of a Novel Anisotropic Phantom for Advanced Diffusion MRI Models.

Journal: Magnetic resonance in medicine

Status: code on request

[6493] doi:10.1007/s10571-026-01706-w [paper, data]

Nitric Oxide Donor Alleviates Cardiac Arrest Induced Blood Brain Barrier Injury by Inhibiting HMGB1-ATG5 Mediated Endothelial Autophagy.

Journal: Cellular and molecular neurobiology

Status: data only, 1 dataset cited

[6494] doi:10.1016/j.bandl.2026.105737 [paper, data]

Parallel contributions of socioeconomic status and bilingual experiences on executive function and the brain in young children.

Journal: Brain and language

Status: data only, 1 dataset cited

[6495] doi:10.1016/j.bpj.2026.03.010 [paper]

Chlorpromazine inhibits EAG1 channels by altering the interdomain coupling.

Journal: Biophysical journal

Status: code on request

[6496] doi:10.1016/j.bpsgos.2026.100720 [paper, data]

Functional Magnetic Resonance Imaging Signal Typically Viewed as "Noise" Has Clinical Relevance in Psychiatry.

Journal: Biological psychiatry global open science

Status: data only, 1 dataset cited

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