PET / SPECT

Modality: 548 papers with a page, 330 of them with their authors' code.

Thursday, 22 October 2026 (1 paper)

[1] doi:10.1007/s00401-026-03103-5 [paper]

TSPO-PET binding in vivo reflects increased phagocytic microglia at post mortem in people with frontotemporal dementia.

Journal: Acta neuropathologica

Status: code on request

Thursday, 1 October 2026 (2 papers)

[2] Code ↔ Paper doi:10.1002/hbm.70651 [paper, repository]

Unveiling Functional-Metabolic Synergy in the Healthy Brain: Multivariate Integration of Dynamic [<sup>18</sup>F]FDG-PET and Resting-State fMRI.

Journal: Human brain mapping

Authors' code: FairUnipd/ConsensusClustering-YanAtlas (no license)

Status: empty repository

[3] Code ↔ Paper doi:10.1002/hbm.70645 [paper, repository]

Spatial Collinearity Constrains Multivariate Molecular-Enriched Network Estimation.

Journal: Human brain mapping

Authors' code: thomasyeolab/cbig (MIT), yetianmed/subcortex (MIT)

Status: code verified, 2,046 files readable, 3 matches

Thursday, 10 September 2026 (2 papers)

[4] doi:10.1093/braincomms/fcag341 [paper]

Distinct and shared multimodal neuroimaging patterns in clinical frontotemporal dementia syndromes.

Journal: Brain communications

Status: code on request

[5] doi:10.1162/imag.a.1358 [paper, data]

Spatial covariance of mGluR5 density and structural degeneration in behavioral variant frontotemporal degeneration.

Journal: Imaging neuroscience (Cambridge, Mass.)

Status: data only, 1 dataset cited

Friday, 4 September 2026 (1 paper)

[6] doi:10.1016/j.ynirp.2026.100402 [paper]

Dopamine D2/3 receptors and functional connectivity during fear extinction: A PET-fMRI study.

Journal: Neuroimage. Reports

Status: code on request

Wednesday, 2 September 2026 (1 paper)

[7] Code ↔ Paper doi:10.7554/elife.104053 [paper, repository]

Brain cognition gaps reveal associations with dopamine and factors related to brain health through artificial intelligence prediction of functional connectome.

Journal: eLife

Authors' code: MorEsm/AI-based-Prediction-of-Cognitive-Function (CC-BY-4.0)

Status: code verified, 3 files readable, 6 matches

Tuesday, 1 September 2026 (3 papers)

[8] Code ↔ Paper doi:10.1002/alz.71822 [paper, repository]

SynthPET: A 3D generative AI approach for FDG-PET image synthesis from T1-weighted MRI and ASL CBF in Alzheimer's disease.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: adni.loni.usc.edu/data-samples/access-data (no license)

Status: dead link

[9] Code ↔ Paper doi:10.1002/alz.71773 [paper, repository]

Brain-derived plasma p-tau217 shows enhanced dynamic range for Alzheimer's disease neuropathological change.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: ysu001/PUP (BSD-3-Clause)

Status: code verified, 277 files readable, 1 match

[10] Code ↔ Paper doi:10.1093/brain/awag075 [paper, repository]

Modelling the temporal evolution of plasma p-tau217, amyloid PET, tau PET and cognition.

Journal: Brain : a journal of neurology

Authors' code: therneau/aftmodel (no license)

Status: code verified, 6 files readable

Thursday, 20 August 2026 (1 paper)

[11] doi:10.1162/imag.a.1343 [paper]

Metabolic connectivity alterations in amyotrophic lateral sclerosis: Individual network analysis based on Wasserstein distances.

Journal: Imaging neuroscience (Cambridge, Mass.)

Status: code on request

Wednesday, 19 August 2026 (1 paper)

[12] Code ↔ Paper doi:10.1038/s41593-026-02363-4 [paper, repository]

Cortical thickness changes precede high levels of amyloid by at least 7 years.

Journal: Nature neuroscience

Authors' code: jamesmroe/yearsBeforeAB (MIT)

Status: code verified, 17 files readable, 6 matches

Wednesday, 12 August 2026 (1 paper)

[13] Code ↔ Paper doi:10.1126/sciadv.aee2305 [paper, repository]

Prediction of mild cognitive impairment progression using time-sensitive multimodal biomarkers.

Journal: Science advances

Authors' code: Zenodo 19897907 (MIT), openpreventad.loris.ca (no license), mcgill.ca/bic/neuroinformatics (no license), ggsegverse/ggseg (other), Zenodo 19411014 (CC-BY-4.0), jogaru1818/progression_to_mci (no license), villeneuvelab/vlpp (MIT)

Status: code verified, 132 files readable, 11 matches

Tuesday, 11 August 2026 (1 paper)

[14] Code ↔ Paper doi:10.1007/s42761-026-00394-5 [paper, repository]

Amygdalar Pattern Similarity to Negative and Neutral Images, Ratings of the Images, and PET-Measured Amyloid and Tau Levels in Older Adults Without Dementia.

Journal: Affective science

Authors' code: OSF qswk6 (no license)

Status: code verified, 4 files readable, 3 matches

Monday, 3 August 2026 (1 paper)

[15] doi:10.1038/s41467-026-75890-0 [paper, data]

Serotonergic psychedelics induce distinct patterns of metabolic activity and covariance within biologically informed rat brain networks.

Journal: Nature communications

Status: data only, 1 dataset cited

Saturday, 1 August 2026 (3 papers)

[16] doi:10.1002/jev2.70347 [paper]

Lymphatic Drainage of Cerebrospinal Fluid Using Lymph Node Seeker 64Cu-Labeled Gram-Negative Bacterial Extracellular Vesicles With Positron Emission Tomography (PET).

Journal: Journal of extracellular vesicles

Status: code on request

[17] Code ↔ Paper doi:10.1002/alz.71711 [paper, repository]

Exploring longitudinal relationships among Alzheimer's disease biomarkers.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: WashUFluidBiomarkers/Dynamic-Visualization (MIT)

Status: code verified, 9 files readable, 2 matches

[18] Code ↔ Paper doi:10.1002/alz.71567 [paper, repository]

Associations of dementia polyexposure scores to Alzheimer's disease endophenotypes in a diverse population.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: AndrewsLabUCSF/CRS-analysis (MIT)

Status: code verified, 6 files readable, 13 matches

Thursday, 30 July 2026 (1 paper)

[19] Code ↔ Paper doi:10.1038/s41398-026-04292-z [paper, repository]

Regional juxtacortical microstructural changes and gene expression provide insights into neurodegeneration in Alzheimer's disease.

Journal: Translational psychiatry

Authors' code: Sahuhu-Sun/Imaging-transcriptomics (no license)

Status: code verified, 5 files readable, 2 matches

Tuesday, 21 July 2026 (1 paper)

[20] Code ↔ Paper doi:10.1162/imag.a.1302 [paper, repository]

Five-year associations among dopamine D2-like receptor loss, cognitive decline, education, and self-reported leisure activities in healthy older adults.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: OSF pwy8f (no license)

Status: code verified, 3 files readable, 7 matches

Sunday, 19 July 2026 (1 paper)

[21] Code ↔ Paper doi:10.1016/j.nicl.2026.104037 [paper, repository]

Revisiting intensity normalization in brain [<sup>18</sup>F]FDG PET: What is reliable in autoimmune encephalitis?

Journal: NeuroImage. Clinical

Authors' code: rogeau/fdg-pet-intensitynorm-ae (MIT)

Status: code verified, 18 files readable

Wednesday, 15 July 2026 (1 paper)

[22] doi:10.1016/j.isci.2026.116676 [paper]

Sleep differentially modulates synaptic vesicle protein 2A and spine density across cortical regions and development.

Journal: iScience

Status: code on request

Friday, 10 July 2026 (2 papers)

[23] Code ↔ Paper doi:10.1007/s12021-026-09798-x [paper, repository]

A Replicable NeuroMark Template for Whole-Brain SPECT Reveals Data-Driven Perfusion Networks and Their Alterations in Schizophrenia.

Journal: Neuroinformatics

Authors' code: esalman/autolabeller (other), trendscenter/gift-bids (CC-BY-4.0)

Status: code verified, 106 files readable, 1 match

[24] Code ↔ Paper doi:10.1126/sciadv.aed0348 [paper, repository]

Remote network for cognitive symptoms derived from tau accumulation in progressive supranuclear palsy.

Journal: Science advances

Authors' code: Zenodo 18240936 (CC-BY-4.0), yukihori1/2026-hori-psp_tau (no license)

Status: code verified, 20 files readable

Wednesday, 8 July 2026 (1 paper)

[25] Code ↔ Paper doi:10.1073/pnas.2532072123 [paper, repository]

Spatially structured heterogeneity shapes large-scale cortical dynamics in a model of the human cortex.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: notsebastiano/transfer_entropy (MIT), ldallap/HeterogeneousBrainModel (no license)

Status: code verified, 6 files readable, 4 matches

Saturday, 4 July 2026 (1 paper)

[26] Code ↔ Paper doi:10.1038/s41467-026-75102-9 [paper, repository]

Glutamatergic signaling underlies brain structural organization for mathematical and reading abilities in children.

Journal: Nature communications

Authors' code: Zenodo 20574388 (CC-BY-4.0), scsnl/yz_smri_math_reading_nt_2025 (CC-BY-NC-4.0)

Status: code verified, 47 files readable, 13 matches

Thursday, 2 July 2026 (1 paper)

[27] Code ↔ Paper doi:10.1016/j.prdoa.2026.100480 [paper, repository]

Multitype hand writing as a digital marker for Parkinson's disease.

Journal: Clinical parkinsonism & related disorders

Authors' code: mishmoth/Multitype-hand-writing-as-a-digital-marker-for-Parkinson-s-disease- (no license)

Status: empty repository

Wednesday, 1 July 2026 (3 papers)

[28] doi:10.1002/hbm.70594 [paper, data]

Neural Correlates of Explicit Outcome Expectation Effects: An Activation Likelihood Estimation Meta-Analysis.

Journal: Human brain mapping

Status: data only, 1 dataset cited

[29] Code ↔ Paper doi:10.1093/schbul/sbag045 [paper, repository]

Cortical Iron and Mesostriatal Dopamine Function in Schizophrenia: A Positron Emission Tomography and Magnetic Resonance Imaging Study.

Journal: Schizophrenia bulletin

Authors' code: lukevano/KCL_Neuromelanin-MRI (CC-BY-NC-4.0)

Status: code verified, 4 files readable, 2 matches

[30] doi:10.1002/dad2.70475 [paper]

Plasma GFAP and language-network tau mediate the effect of amyloid burden on semantic fluency: A mediation analysis.

Journal: Alzheimer's & dementia (Amsterdam, Netherlands)

Status: code on request

Tuesday, 30 June 2026 (1 paper)

[31] Code ↔ Paper doi:10.1016/j.neurobiolaging.2026.06.012 [paper, repository]

Brain structure in the cingulate cortex and locus coeruleus in late life is associated with engagement in complex mental activities across the life span.

Journal: Neurobiology of aging

Authors' code: OSF 63ays (no license)

Status: code verified, 2 files readable, 3 matches

Thursday, 25 June 2026 (1 paper)

[32] doi:10.1186/s13195-026-02119-z [paper, data]

Age-dependent diagnostic and correlational architecture of multiplex plasma biomarkers in Alzheimer's disease: a cross-ethnic, cross-platform validation study.

Journal: Alzheimer's research & therapy

Status: data only, 9 datasets cited

Wednesday, 24 June 2026 (1 paper)

[33] Code ↔ Paper doi:10.1093/braincomms/fcag235 [paper, repository]

Association between glymphatic dysfunction and glucose hypometabolism in chronic disorders of consciousness: a multimodal PET/MRI study.

Journal: Brain communications

Authors' code: gbarisano/alps (MIT)

Status: code verified, 3 files readable, 2 matches

Tuesday, 23 June 2026 (1 paper)

[34] Code ↔ Paper doi:10.1371/journal.pbio.3003816 [paper, repository]

Sleep deprivation increases levels of the synaptic density marker SV2A in the human brain.

Journal: PLoS biology

Authors' code: Zenodo 20033920 (CC-BY-4.0)

Status: code verified

Monday, 22 June 2026 (1 paper)

[35] Code ↔ Paper doi:10.1073/pnas.2531706123 [paper, repository]

Metabolism-weighted brain connectome reveals synaptic integration and vulnerability to neurodegeneration.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: SarahMorgan/Morphometric_Similarity_SZ (MIT), NeuroenergeticsLab/metabolism_weighted_centrality (MIT)

Status: code verified, 12 files readable, 12 matches

Friday, 19 June 2026 (1 paper)

[36] doi:10.1038/s44400-026-00101-y [paper, data]

Functional network contributions to longitudinal tau spread in Posterior Cortical Atrophy.

Journal: NPJ dementia

Status: data only, 1 dataset cited

Thursday, 18 June 2026 (1 paper)

[37] Code ↔ Paper doi:10.3390/ijms27125533 [paper, repository]

Discovery-Driven Plasma Proteomics Identifies a Multi-Protein Signature for Amyloid PET Positivity: A Machine Learning Analysis of the Bio-Hermes Cohort.

Journal: International journal of molecular sciences

Authors' code: stelioslamprou37/SML_PipelineR (MIT)

Status: code verified, 3 files readable, 1 match

Wednesday, 17 June 2026 (1 paper)

[38] Code ↔ Paper doi:10.1016/j.tjpad.2026.100622 [paper, repository]

The time interval from amyloid to tau PET positivity varies by age, sex and APOE-ε4 status.

Journal: The journal of prevention of Alzheimer's disease

Authors' code: cind/Amyloid-tau-interval-paper-Mil--Alom- (no license), cind/Amyloid-tau-interval-paper-Mil-Alom (no license)

Status: code verified, 3 files readable, 2 matches

Tuesday, 16 June 2026 (2 papers)

[39] Code ↔ Paper doi:10.1162/imag.a.1275 [paper, repository]

Glucose metabolism echoes long-range temporal correlations in the human brain.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: wonsang/nonfractal (BSD-2-Clause), murraylab/brainsmash (GPL-3.0)

Status: code verified, 40 files readable, 6 matches

[40] Code ↔ Paper doi:10.3389/fnins.2026.1841093 [paper, repository]

Brain protein burden is related to intravoxel incoherent motion: PET-MR imaging study.

Journal: Frontiers in neuroscience

Authors' code: Zenodo 20560360 (CC-BY-4.0), PostonLab/IVIM_fit (MIT)

Status: code verified, 52 files readable

Friday, 12 June 2026 (1 paper)

[41] doi:10.1016/j.xcrm.2026.102867 [paper]

Psilocybin restores behavior and 5-HT<sub>2A</sub> signaling while reducing microglial density after chronic traumatic brain injury in rats.

Journal: Cell reports. Medicine

Status: code on request

Thursday, 11 June 2026 (1 paper)

[42] Code ↔ Paper doi:10.1016/j.isci.2026.116336 [paper, repository]

Transcriptomic signatures of synaptic loss in Alzheimer's disease.

Journal: iScience

Authors' code: Sahuhu-Sun/Imaging-transcriptomics (no license)

Status: code verified, 5 files readable, 2 matches

Wednesday, 10 June 2026 (1 paper)

[43] doi:10.1016/j.ajcnut.2026.101392 [paper]

Circulating palmitoleic acid is associated with cerebral glucose metabolism in healthy middle-aged individuals: results from the Progression of Early Subclinical Atherosclerosis prospective cohort study.

Journal: The American journal of clinical nutrition

Status: code on request

Wednesday, 3 June 2026 (3 papers)

[44] Code ↔ Paper doi:10.1038/s42003-026-10388-5 [paper, repository]

Hierarchical organization of tau topography across the Alzheimer's disease continuum integrates amyloid, connectome, and intrinsic molecular vulnerability.

Journal: Communications biology

Authors' code: Zenodo 20278594 (CC-BY-4.0)

Status: code verified

[45] doi:10.1007/s00429-026-03134-4 [paper]

Characterizing functional connectivity gradients for the hippocampus-amygdala complex in healthy and psychiatric cohorts.

Journal: Brain structure & function

Status: code on request

[46] doi:10.1038/s41398-026-04107-1 [paper]

Abnormal left prefrontal N100 and its relationship with fronto-limbic metabolism in major depressive disorder.

Journal: Translational psychiatry

Status: code on request

Tuesday, 2 June 2026 (1 paper)

[47] Code ↔ Paper doi:10.1007/s00415-026-13876-0 [paper, repository]

Functional connectivity dynamics of monoaminergic circuits related to fatigue in multiple sclerosis.

Journal: Journal of neurology

Authors' code: neuroimaging-mug/ms-volest (GPL-3.0), taabroeders/Recon_Dyn_MS (no license), marloesbet/fatigue_dynamics (no license)

Status: code verified, 15 files readable

Monday, 1 June 2026 (5 papers)

[48] Code ↔ Paper doi:10.1093/brain/awaf413 [paper, repository]

Estimating the time course of biomarker changes in Alzheimer's disease.

Journal: Brain : a journal of neurology

Authors' code: larslau/progmod (no license)

Status: code verified, 3 files readable, 2 matches

[49] Code ↔ Paper doi:10.1002/alz.71530 [paper, repository]

Differential associations of plasma biomarkers with Alzheimer's disease and small vessel disease: A multimodal imaging study.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: miac-research/MARS-WMH (other)

Status: code verified, 9 files readable

[50] Code ↔ Paper doi:10.1002/alz.71587 [paper, repository]

Vulnerability of the locus coeruleus-entorhinal cortex white matter tract in autosomal dominant Alzheimer's disease.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: mrtrix.readthedocs.io (no license)

Status: code verified

[51] Code ↔ Paper doi:10.1002/alz.71571 [paper, repository]

Vulnerability of anterior medial temporal lobe subregions to early tau-related neurodegeneration in Alzheimer's disease: Converging evidence from tau-PET and plasma p-tau217.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: pyushkevich/cmrep (GPL-3.0)

Status: code verified, 104 files readable

[52] doi:10.1002/alz.71609 [paper, data]

Cortical gray-white matter contrast alterations precede amyloid-β positivity and macrostructural changes in older adults without dementia.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Status: data only, 2 datasets cited

Wednesday, 27 May 2026 (1 paper)

[53] doi:10.1007/s00259-026-07939-7 [paper]

Plasma phosphorylated tau biomarkers map onto [^18F]FDG PET hypometabolism: a voxel-wise study in a clinical cohort with CSF-confirmed AD subgroup analysis.

Journal: European journal of nuclear medicine and molecular imaging

Status: code on request

Tuesday, 26 May 2026 (1 paper)

[54] doi:10.1016/j.isci.2026.116092 [paper, data]

Sigma-1 receptor promotes glycolysis in neuronal systems by suppressing GRIM19.

Journal: iScience

Status: code on request, 1 dataset cited

Thursday, 21 May 2026 (1 paper)

[55] Code ↔ Paper doi:10.1038/s41597-026-07421-x [paper, repository]

The Brain Imaging and Neurophysiology Dataset of large-scale multimodal neural data.

Journal: Scientific data

Authors' code: bdsp-core/BigBrainImagingDatabase (CC-BY-NC-4.0)

Status: code verified, 5 files readable, 4 matches

Wednesday, 20 May 2026 (2 papers)

[56] doi:10.1038/s41398-026-04064-9 [paper]

Stage-dependent reorganization of amyloid PET region-symptom bipartite networks in drug-naïve, amyloid-positive Alzheimer's disease.

Journal: Translational psychiatry

Status: code on request

[57] Code ↔ Paper doi:10.1038/s41531-026-01388-7 [paper, repository]

Converging metabolic and functional networks for tremor expression and deep brain stimulation-mediated control.

Journal: NPJ Parkinson's disease

Authors' code: BenediktWeigl/Converging-metabolic-and-functional-tremor-networks (no license)

Status: code verified, 3 files readable, 2 matches

Monday, 18 May 2026 (2 papers)

[58] Code ↔ Paper doi:10.1007/s12149-026-02218-9 [paper, repository]

Whole-brain histogram analysis and top 20% gray and white matter ratio of amyloid positron emission tomography: A comparison with the centiloid scale.

Journal: Annals of nuclear medicine

Authors' code: MIC-DKFZ/HD-BET (Apache-2.0)

Status: code verified, 7 files readable

[59] Code ↔ Paper doi:10.1093/braincomms/fcag176 [paper, repository]

Tau topography subtypes account for clinical heterogeneity and longitudinal trajectories in early-onset Alzheimer's disease.

Journal: Brain communications

Authors' code: rablabservice/EOAD_tauPET_subtype (MIT), Zenodo 837898 (other-open), tompollard/tableone (MIT)

Status: code verified, 73 files readable, 9 matches

Friday, 15 May 2026 (1 paper)

[60] doi:10.1038/s41598-026-51023-x [paper, data]

Adaptive patch sampling and location-aware reasoning for whole body PET-CT multi-organ segmentation.

Journal: Scientific reports

Status: data only, 1 dataset cited

Thursday, 7 May 2026 (1 paper)

[61] Code ↔ Paper doi:10.64898/2026.05.06.26352540 [paper, repository]

Generating synthetic tau-PET scans in Alzheimer’s disease from MRI, blood biomarkers and demographics with deep learning

Journal: medRxiv (preprint)

Authors' code: DeMONLab-BioFINDER/karlsson_synthetic_taupet (CC-BY-NC-4.0)

Status: code verified, 22 files readable, 7 matches

Monday, 4 May 2026 (1 paper)

[62] doi:10.1016/j.crmeth.2026.101427 [paper]

Noninvasive focal gene transfer of chemogenetic proteins in the primate brain.

Journal: Cell reports methods

Status: code on request

Friday, 1 May 2026 (2 papers)

[63] Code ↔ Paper doi:10.1002/hipo.70100 [paper, repository]

Dissociable Mechanisms Underlie Differences Between Memory and Metamemory in Older Adults: The Differentiating Role of Anxiety and Depression Symptoms.

Journal: Hippocampus

Authors' code: OSF 6et32 (no license)

Status: code verified, 2 files readable, 5 matches

[64] doi:10.1002/alz.71453 [paper]

Correlation between in vivo <sup>18</sup>F-flortaucipir PET and whole-brain postmortem histological tau signals in Alzheimer's disease.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Status: code on request

Monday, 27 April 2026 (1 paper)

[65] Code ↔ Paper doi:10.1093/braincomms/fcag145 [paper, repository]

GABA<sub>A</sub> binding correlates with high-frequency EEG: a possible proxy for depolarization in traumatic brain injury.

Journal: Brain communications

Authors' code: S-Shah-Lab/GABAABindingCorrelates (no license)

Status: code verified, 6 files readable, 4 matches

Saturday, 25 April 2026 (1 paper)

[66] Code ↔ Paper doi:10.1038/s41386-026-02426-x [paper, repository]

A frontotemporal dementia-like phenotype in schizophrenia: links to striatal dopamine and iron accumulation.

Journal: Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology

Authors' code: neurominer-git.github.io/neurominer_1.2 (no license), neurominer-git/NeuroMiner_1.2 (GPL-2.0)

Status: code verified, 2,000 files readable, 6 matches

Wednesday, 22 April 2026 (1 paper)

[67] Code ↔ Paper doi:10.1093/braincomms/fcag136 [paper, repository]

Lower synaptic density in mood circuitry underlies depression in Parkinson's disease.

Journal: Brain communications

Authors' code: cayirsalih/Parkinsons-analysis (no license)

Status: code verified, 1 file readable, 1 match

Tuesday, 21 April 2026 (2 papers)

[68] doi:10.1038/s41398-026-04039-w [paper, data]

Subanesthetic doses of ketamine to rats and monkeys rapidly increases radioligand binding in brain to phosphodiesterase-4, an indirect marker of cAMP.

Journal: Translational psychiatry

Status: data only, 1 dataset cited

[69] doi:10.1038/s41598-026-49034-9 [paper, data]

Multimodal preclinical study of long-term effects of prenatal ultrasound on the mouse central nervous system.

Journal: Scientific reports

Status: data only, 1 dataset cited

Wednesday, 15 April 2026 (1 paper)

[70] Code ↔ Paper doi:10.1016/j.isci.2026.115747 [paper, repository]

Realistic PET image synthesis from MRI for automated inference of brain atrophy and Alzheimer's.

Journal: iScience

Authors' code: Zenodo 15089724 (CC-BY-4.0), btheodorou99/MRI2PET (MIT)

Status: code verified, 124 files readable, 13 matches

Monday, 13 April 2026 (1 paper)

[71] doi:10.3389/fnbeh.2026.1812480 [paper, data]

Oropharyngeal dysphagia and amyloid beta pathology in the TgF344-AD rat model of Alzheimer's disease.

Journal: Frontiers in behavioral neuroscience

Status: data only, 1 dataset cited

Friday, 10 April 2026 (2 papers)

[72] Code ↔ Paper doi:10.1007/s00259-026-07864-9 [paper, repository]

Anatomy-corrected metabolic asymmetry predicts seizure freedom after surgery in focal cortical dysplasia.

Journal: European journal of nuclear medicine and molecular imaging

Authors' code: jeroengijs/ACAI (MIT)

Status: code verified, 16 files readable, 4 matches

[73] Code ↔ Paper doi:10.1016/j.neuroimage.2026.121921 [paper, repository]

A hierarchical brain MRI atlas of the coppery titi monkey (Plecturocebus cupreus).

Journal: NeuroImage

Authors' code: ajchaudhari/ucd-tina (GPL-3.0)

Status: code verified, 2 files readable

Thursday, 9 April 2026 (1 paper)

[74] Code ↔ Paper doi:10.1038/s41467-026-71732-1 [paper, repository]

Trajectories of plasma and CSF MTBR-tau243 and phosphorylated-tau species across the Alzheimer's disease continuum.

Journal: Nature communications

Authors' code: Betthauser-Neuro-Lab/SILA-AD-Biomarker (GPL-3.0)

Status: code verified, 11 files readable, 2 matches

Wednesday, 1 April 2026 (7 papers)

[75] Code ↔ Paper doi:10.1093/brain/awaf375 [paper, repository]

Reference proteins to improve Core 1 and Core 2 Alzheimer's disease CSF and plasma biomarkers.

Journal: Brain : a journal of neurology

Authors' code: DeMONLab-BioFINDER/karlsson_refprot_normalization (no license)

Status: code verified, 4 files readable, 4 matches

[76] Code ↔ Paper doi:10.1093/brain/awaf412 [paper, repository]

Multimodal multicentre investigation of diagnostic and prognostic markers in disorders of consciousness.

Journal: Brain : a journal of neurology

Authors' code: DraganaMana/multimod_doc (no license)

Status: code verified, 38 files readable, 4 matches

[77] Code ↔ Paper doi:10.1002/alz.71343 [paper, repository]

Health system patterns of imaging and fluid biomarker testing in the era of anti-amyloid therapies.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: RadGenLab/AmyloidVolume (no license)

Status: dead link

[78] Code ↔ Paper doi:10.1002/hbm.70508 [paper, repository]

Cyclic 2.5D Perceptual Loss for Cross-Modal 3D Medical Image Synthesis: T1w MRI to Tau PET.

Journal: Human brain mapping

Authors' code: labhai/Cyclic-2.5D-Perceptual-Loss (no license)

Status: code verified, 6 files readable, 3 matches

[79] Code ↔ Paper doi:10.1002/alz.71366 [paper, repository]

Divergent patterns of cognitive decline in preclinical Alzheimer's disease: Implications for secondary prevention trials.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: atri-biostats/a4learn (no license)

Status: code verified, 9 files readable, 14 matches

[80] Code ↔ Paper doi:10.1002/hbm.70534 [paper, repository]

Longitudinal Multimodal Neuroimaging After Traumatic Brain Injury.

Journal: Human brain mapping

Authors' code: anaradanovic/MultiMod_TBI (no license)

Status: code verified, 27 files readable

[81] Code ↔ Paper doi:10.1002/trc2.70278 [paper, repository]

A combination of ketones and NAD<sup>+</sup> precursor preserves white matter integrity in mild cognitive impairment.

Journal: Alzheimer's & dementia (New York, N. Y.)

Authors' code: scilus/rbx_flow (MIT)

Status: empty repository, 2 files readable

Tuesday, 31 March 2026 (1 paper)

[82] Code ↔ Paper doi:10.1007/s00259-026-07868-5 [paper, repository]

Bayesian modelling demonstrates clinically relevant heterogeneity in Tau PET patterns in Alzheimer's disease.

Journal: European journal of nuclear medicine and molecular imaging

Authors' code: thomasyeolab/cbig (MIT)

Status: code verified, 2,000 files readable

Monday, 30 March 2026 (1 paper)

[83] Code ↔ Paper doi:10.1002/advs.202518124 [paper, repository]

Cognitive Trajectories from Preclinical Alzheimer's Disease to Dementia.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Authors' code: larslau/progmod (no license)

Status: code verified, 3 files readable, 1 match

Wednesday, 25 March 2026 (1 paper)

[84] Code ↔ Paper doi:10.1038/s41597-026-07081-x [paper, repository]

A Multimodal Dataset to Investigate Task-Evoked Negative BOLD Response and Neurodegeneration.

Journal: Scientific data

Authors' code: QuantitativeNeuroimagingLaboratory (no license)

Status: code verified

Tuesday, 24 March 2026 (1 paper)

[85] doi:10.1007/s11307-026-02098-5 [paper]

Astrocyte Activation Persists after Recovery of Myelin and Motor Deficits in the Cuprizone Model: a Longitudinal PET and CNS Tissue Analysis Study.

Journal: Molecular imaging and biology

Status: code on request

Monday, 23 March 2026 (3 papers)

[86] Code ↔ Paper doi:10.21203/rs.3.rs-8687892/v1 [paper, repository]

Brain network dynamics determine tau presence while regional vulnerability governs tau load in Alzheimer’s disease

Journal: Research Square (preprint)

Authors' code: netneurolab/hansenmanynetworks (no license), DeMONLab-BioFINDER/Xiao_Tau_simulation_SIR (no license), ucl-pond (no license)

Status: code verified, 15 files readable, 4 matches

[87] doi:10.1038/s41398-026-03951-5 [paper, data]

Metabotropic glutamate receptor 5 in the anterior cingulate cortex predicts individual differences in motor impulsivity but not in risky decision-making.

Journal: Translational psychiatry

Status: data only, 2 datasets cited

[88] doi:10.3389/fnagi.2026.1620991 [paper, data]

Systemic proteomic and organ aging signatures associated with plasma Aβ oligomerization in a Korean cohort: a cross-sectional study.

Journal: Frontiers in aging neuroscience

Status: data only, 1 dataset cited

Thursday, 19 March 2026 (1 paper)

[89] doi:10.1038/s41467-026-70707-6 [paper]

Divergent white matter metabolic signature patterns indicate impending cognitive decline in aging and dementia.

Journal: Nature communications

Status: code on request

Thursday, 12 March 2026 (1 paper)

[90] doi:10.1002/mds.70265 [paper, repository]

Differential Progression of Neuroinflammation in Patients with Isolated Rapid-Eye-Movement Sleep Behavior Disorder.

Journal: Movement disorders : official journal of the Movement Disorder Society

Authors' code: lassemadsen (no license)

Status: code verified

Tuesday, 10 March 2026 (1 paper)

[91] doi:10.1093/braincomms/fcag075 [paper, repository]

Intracellular fluid accumulation underlies brain volume increases in early Alzheimer's disease.

Journal: Brain communications

Authors' code: mkassinopoulos/2026_multib_paper_AlfaPLUS (MIT)

Status: code verified, 17 files readable, 4 matches

Monday, 9 March 2026 (1 paper)

[92] doi:10.1093/braincomms/fcag074 [paper, repository]

Plasma p-tau217 and glucose metabolism correlate in neocortical association areas in Alzheimer's disease.

Journal: Brain communications

Authors' code: lnkoenig/ptau-217-and-FDG-PET-AD-official-copy (no license), lnkoenig/ptau-217-and-FDG-PET-AD—official-copy (no license)

Status: dead link

Saturday, 7 March 2026 (1 paper)

[93] doi:10.1093/braincomms/fcag066 [paper, repository]

Ventricular enlargement is associated with early Alzheimer's disease pathophysiology.

Journal: Brain communications

Authors' code: tnl-mcsa/tutorials (no license)

Status: empty repository, 1 file readable

Tuesday, 3 March 2026 (1 paper)

[94] doi:10.21203/rs.3.rs-8895728/v1 [paper]

Non-invasive full quantification of dynamic [11C]PBR28 PET imaging with ASTRA

Journal: Research Square (preprint)

Status: code on request

Monday, 2 March 2026 (1 paper)

[95] doi:10.1073/pnas.2536792123 [paper, repository]

Head-to-head comparison of brain-derived pTau217 and total pTau217 for brain amyloid and tau pathology classification.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: yjiangah/BDpTau217_study (no license)

Status: empty repository

Sunday, 1 March 2026 (3 papers)

[96] doi:10.1093/brain/awaf346 [paper]

Staging Alzheimer's disease through amyloid and tau PET.

Journal: Brain : a journal of neurology

Status: code on request

[97] doi:10.1093/geront/gnaf277 [paper, repository]

What characterizes the exceptional cognition of superagers? A systematic review of multidomain biomarkers of successful cognitive aging.

Journal: The Gerontologist

Authors' code: ariayryang/SCA-signature (no license)

Status: code verified, 2 files readable

[98] doi:10.1002/alz.71310 [paper, repository]

Mapping individual molecular connectomes in Alzheimer's disease.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: zhileixu/IndividualMolecularConnectomes (no license)

Status: code verified, 18 files readable, 6 matches

Thursday, 26 February 2026 (1 paper)

[99] doi:10.1038/s41531-026-01294-y [paper]

Serotonergic cortico-limbic and executive network dysfunction in Parkinson's disease impulse control disorders: a PET-fMRI study.

Journal: NPJ Parkinson's disease

Status: code on request

Wednesday, 25 February 2026 (1 paper)

[100] doi:10.1162/imag.a.1151 [paper, repository]

Unveiling unified patterns in Alzheimer's disease subtypes: An SCCA clustering approach integrating PET imaging and genomics data.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: bidslabumass/SCCA-Clustering (no license)

Status: code verified, 17 files readable, 5 matches

Tuesday, 24 February 2026 (1 paper)

[101] doi:10.1162/imag.a.1139 [paper, repository]

Validating molecular target-enriched fMRI for disentangling drug effects on dopamine.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: rubenvandenbosch/slice_display (MIT)

Status: code verified, 13 files readable

Thursday, 19 February 2026 (1 paper)

[102] doi:10.1186/s12880-026-02168-8 [paper, data]

Subregional limbic radiomics on FDG-PET provides accurate early detection of Alzheimer's disease.

Journal: BMC medical imaging

Status: data only, 1 dataset cited

Tuesday, 17 February 2026 (1 paper)

[103] doi:10.1371/journal.pone.0342738 [paper, repository]

Early diagnosis of Alzheimer's Disease: Graph theoretical analysis of cerebellar network features based on 18F-AV45 PET.

Journal: PloS one

Authors' code: LYRLJL/cerebellum_machine-learning (no license)

Status: code verified, 7 files readable, 2 matches

Friday, 13 February 2026 (1 paper)

[104] doi:10.3892/or.2026.9076 [paper, data]

Tumor visualization and evaluation of glioblastoma in mice using small animal 9.4T MRI and PET‑CT with high resolution.

Journal: Oncology reports

Status: data only, 1 dataset cited

Tuesday, 10 February 2026 (1 paper)

[105] doi:10.1038/s42003-026-09693-w [paper, repository]

Bridging glucose metabolism and intrinsic functional organization of the human cortex.

Journal: Communications biology

Authors' code: brainspace.readthedocs.io (no license), wanb-psych/asymmetry_energy (no license)

Status: code verified, 13 files readable, 1 match

Friday, 6 February 2026 (1 paper)

[106] doi:10.1016/j.tjpad.2026.100501 [paper]

Spatial amyloid-informed multimodal brain age as an early marker of Alzheimer's-related vulnerability and risk stratification.

Journal: The journal of prevention of Alzheimer's disease

Status: code on request

Monday, 2 February 2026 (1 paper)

[107] doi:10.2967/jnumed.125.270660 [paper, data]

In Vivo PET Imaging of [<sup>18</sup>F]CHDI-385, a Radioligand for Mutant Huntingtin Aggregates in a Mouse Model of Huntington Disease.

Journal: Journal of nuclear medicine : official publication, Society of Nuclear Medicine

Status: data only, 1 dataset cited

Sunday, 1 February 2026 (4 papers)

[108] doi:10.1002/psp4.70173 [paper, repository]

Brain Amyloid Plaque Levels Affect Clinical Progression in Alzheimer Disease: Assessment of Amyloid PET and Change in CDR-SB Utilizing Semi-Mechanistic Model.

Journal: CPT: pharmacometrics & systems pharmacology

Authors' code: supp:PMC12823306/PSP4-15-e70173-s002.zip (no license)

Status: code verified, 2 files readable

[109] doi:10.1002/alz.71162 [paper, data]

AI-enhanced Centiloid quantification of amyloid PET images.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Status: code on request, 2 datasets cited

[110] doi:10.1016/j.xcrm.2026.102629 [paper, repository]

Enhancing diagnosis of mild cognitive impairment through brain-heart-gut metabolic networks in whole-body PET imaging.

Journal: Cell reports. Medicine

Authors' code: lifan0321/Brain-Heart-Gut (no license)

Status: code verified, 24 files readable, 8 matches

[111] doi:10.1002/alz.71211 [paper, repository]

Altered brain glucose metabolism and connectivity in young adults with obstructive sleep apnea.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: inm7/jubrain-anatomy-toolbox (no license)

Status: code verified, 21 files readable

Saturday, 31 January 2026 (1 paper)

[112] doi:10.1007/s00259-026-07769-7 [paper, repository]

Automated long axial field of view PET image processing and kinetic modelling with the TurBO toolbox.

Journal: European journal of nuclear medicine and molecular imaging

Authors' code: turbo.utu.fi (no license)

Status: code verified

Friday, 30 January 2026 (1 paper)

[113] doi:10.1002/mds.70199 [paper, data]

Monoaminergic Networks of Cognitive and Behavioral Symptoms in Early Parkinson's Disease.

Journal: Movement disorders : official journal of the Movement Disorder Society

Status: data only, 1 dataset cited

Wednesday, 28 January 2026 (1 paper)

[114] doi:10.1002/mds.70197 [paper, repository]

Clinical and Imaging Characteristics of Parkinson's Disease with Negative Alpha-Synuclein Seed Amplification Assay.

Journal: Movement disorders : official journal of the Movement Disorder Society

Authors' code: Zenodo 15238103 (CC-BY-4.0)

Status: code verified, 12 files readable, 8 matches

Tuesday, 27 January 2026 (2 papers)

[115] doi:10.1007/s00401-026-02979-7 [paper, repository]

FAP expression as a marker of malignant transformation enabling in vivo characterization in peripheral nerve sheath tumors: a multimodal and translational study.

Journal: Acta neuropathologica

Authors' code: ngr-path/Analysis_R_FAP_NF1_MPNST (no license)

Status: code verified, 6 files readable, 11 matches

[116] doi:10.1371/journal.pone.0340781 [paper, repository]

YUV-based SVD-VGG hybrid fusion for multimodal MRI-PET image integration.

Journal: PloS one

Authors' code: kandalaramesh/SVD-CNN-Fusion (no license)

Status: code verified, 6 files readable, 5 matches

Friday, 23 January 2026 (1 paper)

[117] doi:10.1126/sciadv.adx6539 [paper, data]

Steroid-dependent metabolic rewiring reveals novel therapeutic and imaging approaches for glioblastoma.

Journal: Science advances

Status: data only, 1 dataset cited

Thursday, 22 January 2026 (2 papers)

[118] doi:10.1162/imag.a.1107 [paper, repository]

TSPO-PET reveals higher inflammation in white matter disrupted by paramagnetic rim lesions in multiple sclerosis.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: cerent/PET_NeMo (no license)

Status: code verified, 2 files readable, 1 match

[119] doi:10.1162/imag.a.1110 [paper, repository]

Graphical modeling of cortical tau pathology topography for its subtyping in Alzheimer's disease.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: Jiaxin-Yue/Tau-PET-Graphical-Model (MIT)

Status: code verified, 12 files readable, 4 matches

Tuesday, 20 January 2026 (1 paper)

[120] doi:10.1016/j.xinn.2026.101272 [paper]

Plasma p-Tau217 improves diagnostic accuracy and clinician confidence in cognitive disorder classification.

Journal: Innovation (Cambridge (Mass.))

Status: code on request

Tuesday, 13 January 2026 (1 paper)

[121] doi:10.1007/s00429-025-03069-2 [paper, repository]

Inter-individual variability of neurotransmitter receptor and transporter density in the human brain.

Journal: Brain structure & function

Authors' code: netneurolab/hansen_receptorvar (no license)

Status: code verified, 2 files readable

Wednesday, 7 January 2026 (1 paper)

[122] doi:10.1016/j.nicl.2026.103944 [paper, data]

Striatal dopamine synthesis capacity in Parkinson's disease: Effects of age, sex, and body mass index in a large [<sup>18</sup>F]fluorodopa PET cohort.

Journal: NeuroImage. Clinical

Status: data only, 1 dataset cited

Tuesday, 6 January 2026 (1 paper)

[123] doi:10.3389/frdem.2025.1725754 [paper, data]

Diffusion kurtosis imaging detects cortical microstructural alterations in amyloid-positive MCI patients.

Journal: Frontiers in dementia

Status: data only, 1 dataset cited

Saturday, 3 January 2026 (1 paper)

[124] doi:10.1186/s12888-025-07750-y [paper, data]

Comparison of clinical features and cerebral glucose metabolism between patients with major depressive disorder and Parkinson's with depression.

Journal: BMC psychiatry

Status: data only, 2 datasets cited

Thursday, 1 January 2026 (6 papers)

[125] doi:10.7150/thno.117418 [paper, data]

Longitudinal <i>in vivo</i> (<i>R</i>)-[<sup>18</sup>F]FBFP PET imaging for preclinical evaluation of cerebral sigma-1 receptor after ischemic stroke.

Journal: Theranostics

Status: data only, 1 dataset cited

[126] doi:10.1093/cercor/bhaf337 [paper, repository]

Secondary thalamic neuroinflammation associates with disturbed corticothalamic connectivity in a model of severe traumatic brain injury in male rats-a longitudinal study.

Journal: Cerebral cortex (New York, N.Y. : 1991)

Authors' code: snakemake.github.io (no license), stnava.github.io/ants (no license)

Status: code verified

[127] doi:10.1002/alz.71126 [paper, data]

Neuroimaging markers and cognition in cognitively unimpaired older Latinos from the Harvard Aging Brain Study.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Status: data only, 1 dataset cited

[128] doi:10.1002/dad2.70281 [paper]

Digital cognition plus plasma p-Tau217 and Aβ42/40 powerfully predict Alzheimer's progression.

Journal: Alzheimer's & dementia (Amsterdam, Netherlands)

Status: code on request

[129] doi:10.1093/noajnl/vdag159 [paper]

Multi-threshold volumetric <sup>18</sup>F-FET PET for tumor detection and prognosis in primary glioma.

Journal: Neuro-oncology advances

Status: code on request

[130] doi:10.1159/000553017 [paper, data]

Glioblastoma beyond the Brain: A Case Series Demonstrating Systemic Metastatic Potential.

Journal: Case reports in oncology

Status: data only, 1 dataset cited

Wednesday, 24 December 2025 (3 papers)

[131] doi:10.1159/000550231 [paper, data]

Investigating Alzheimer's Disease Progression Using a Radiomics Approach: The Hippocampal-Amygdala Border in FDG-Positron Emission Tomography Scans.

Journal: Neuro-degenerative diseases

Status: data only, 1 dataset cited

[132] doi:10.1038/s41380-025-03385-3 [paper, repository]

Endogenous opioid system modulates proximal and distal threat signals in the human brain.

Journal: Molecular psychiatry

Authors' code: tkkarjal/magia (MIT)

Status: code verified, 172 files readable, 4 matches

[133] doi:10.64898/2025.12.22.695942 [paper, repository]

Open-access template and database approaches for pseudo-CT generation in brain PET/MRI attenuation correction

Journal: bioRxiv (preprint)

Authors' code: NeuroimagingLabsMUV/Milz_2025_pseudoCT (GPL-2.0)

Status: code verified, 3 files readable

Tuesday, 23 December 2025 (1 paper)

[134] doi:10.1093/braincomms/fcaf495 [paper, data]

PET in conjunction with resting-state functional MRI for the study of chronic disorders of consciousness.

Journal: Brain communications

Status: data only, 1 dataset cited

Friday, 19 December 2025 (2 papers)

[135] doi:10.1186/s13195-025-01931-3 [paper, data]

Development and validation of an interpretable clinical scoring model to monitor the progression of preclinical Alzheimer's disease.

Journal: Alzheimer's research & therapy

Status: data only, 1 dataset cited

[136] doi:10.64898/2025.12.17.694867 [paper, repository]

A Comparative Evaluation of Molecular Connectivity and Covariance Approaches

Journal: bioRxiv (preprint)

Authors' code: NeuroimagingLabsMUV/fPET-toolbox (GPL-2.0)

Status: code verified, 95 files readable, 6 matches

Thursday, 18 December 2025 (1 paper)

[137] doi:10.1007/s00109-025-02621-1 [paper, data]

Preclinical evaluation of [<sup>11</sup>C]CHDI-009R for quantification of mutant huntingtin aggregates.

Journal: Journal of molecular medicine (Berlin, Germany)

Status: data only, 1 dataset cited

Wednesday, 17 December 2025 (1 paper)

[138] doi:10.3389/frai.2025.1731062 [paper, repository]

Deep multimodal learning for domain-level cognitive decline prediction in Alzheimer's disease.

Journal: Frontiers in artificial intelligence

Authors' code: FernandoGaGu/Domain-cognitive-decline-prediction (no license)

Status: code verified, 46 files readable, 28 matches

Saturday, 13 December 2025 (2 papers)

[139] doi:10.1038/s41467-025-67477-y [paper, data]

Methylphenidate reorganizes cortical hierarchy through dopaminergic modulation.

Journal: Nature communications

Status: data only, 1 dataset cited

[140] doi:10.3390/brainsci15121330 [paper, repository]

The Neural Contributions to Reactive Balance Control: A Scoping Review of EEG, fNIRS, MRI, and PET Studies.

Journal: Brain sciences

Authors' code: OSF ckyf6 (no license)

Status: empty repository

Tuesday, 9 December 2025 (1 paper)

[141] doi:10.1162/imag.a.1053 [paper]

Fully individualized models for cross-sectional and longitudinal network-based tau spread.

Journal: Imaging neuroscience (Cambridge, Mass.)

Status: code on request

Friday, 5 December 2025 (2 papers)

[142] doi:10.1186/s13195-025-01924-2 [paper, data]

Post-infection brain atrophy accelerates cognitive and molecular changes underlying dementia.

Journal: Alzheimer's research & therapy

Status: data only, 2 datasets cited

[143] doi:10.1038/s43856-025-01170-5 [paper, repository]

Integrating individualized connectome with amyloid pathology improves predictive modeling of future cognitive decline.

Journal: Communications medicine

Authors' code: hehengda/cross_validation_network_based_amyloid (MIT), figshare 30152470 (CC-BY-4.0)

Status: code verified, 8 files readable, 6 matches

Thursday, 4 December 2025 (1 paper)

[144] doi:10.1371/journal.pone.0335952 [paper, data]

Brain tumour segmentation in fused MRI-PET images with permutate U-Net framework.

Journal: PloS one

Status: data only, 1 dataset cited

Tuesday, 2 December 2025 (1 paper)

[145] doi:10.3389/fmedt.2025.1699821 [paper, data]

An advanced multimodal image fusion model for accurate detection of Alzheimer's disease using MRI and PET.

Journal: Frontiers in medical technology

Status: data only, 1 dataset cited

Monday, 1 December 2025 (6 papers)

[146] doi:10.1002/hbm.70421 [paper, repository]

Discordance Between Spatial and Population Correlations From Human Brain Imaging Data.

Journal: Human brain mapping

Authors' code: bozenne/article-mapping-fMRI-PET (no license)

Status: code verified, 13 files readable, 5 matches

[147] doi:10.1038/s41398-025-03766-w [paper]

Relationships between local metabolic activity and distributed functional connectivity in major depressive disorder.

Journal: Translational psychiatry

Status: code on request

[148] doi:10.1038/s44321-025-00348-7 [paper, repository]

Prediction of continuous amyloid positron emission tomography with fluid measures of phosphorylated tau and β-amyloid.

Journal: EMBO molecular medicine

Authors' code: DeMONLab-BioFINDER/continuous-abpet-prediction (no license)

Status: code verified, 4 files readable, 3 matches

[149] doi:10.1002/alz.70970 [paper, repository]

Enrichment of patients with concomitant limbic-predominant age-related TDP-43 encephalopathy (LATE) on the Alzheimer's disease continuum using hippocampal volume.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: pyushkevich/cmrep (GPL-3.0)

Status: code verified, 104 files readable

[150] doi:10.1002/alz.70982 [paper, data]

Blood gene expression network expression strongly relates to brain amyloid burden.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Status: data only, 1 dataset cited

[151] doi:10.1002/hbm.70427 [paper, repository]

Disrupted Energetic and Entropic Landscape in Individuals With Mild Cognitive Impairment: Insights From Network Control Theory.

Journal: Human brain mapping

Authors' code: dn3umann/nct-mci (no license)

Status: code verified, 3 files readable, 3 matches

Saturday, 29 November 2025 (1 paper)

[152] doi:10.1038/s41380-025-03306-4 [paper]

Mapping the path to recovery: the intersection of cortical thickness reductions and serotonin transporter expression in anorexia nervosa.

Journal: Molecular psychiatry

Status: code on request

Thursday, 27 November 2025 (1 paper)

[153] doi:10.1172/jci196638 [paper, repository]

Early axonal degeneration linked to clinical decline in Alzheimer's disease progression revealed with diffusion MRI.

Journal: The Journal of clinical investigation

Authors' code: mrpadunit/JCI_paper_Early_axonal_degeneration (no license)

Status: code verified, 17 files readable, 1 match

Wednesday, 26 November 2025 (2 papers)

[154] doi:10.1161/jaha.125.040710 [paper, data]

Vascular and Neural Transcriptomics Reveal Stage-Dependent Pathways to Inflammation and Cognitive Dysfunction in a Rat Model of Hypertension.

Journal: Journal of the American Heart Association

Status: data only, 1 dataset cited

[155] doi:10.1016/j.isci.2025.114221 [paper]

MRI-DTI contributes to evaluating diffuse neural injury following repetitive mild traumatic brain injury.

Journal: iScience

Status: code on request

Thursday, 20 November 2025 (2 papers)

[156] doi:10.1038/s41531-025-01164-z [paper]

Discriminating between proposed Brain-First and Body-First Parkinson's disease using conventional and radiomics-enhanced dopamine transporter SPECT image analysis.

Journal: NPJ Parkinson's disease

Status: code on request

[157] doi:10.1038/s43856-025-01167-0 [paper, repository]

Personalized neurometabolic signature predicts seizure outcomes of laser ablation in mesial temporal lobe epilepsy.

Journal: Communications medicine

Authors' code: EpiNeuroSurg/pNMS (no license), Zenodo 17042331 (CC-BY-4.0)

Status: code verified, 26 files readable, 3 matches

Wednesday, 19 November 2025 (2 papers)

[158] doi:10.1371/journal.pone.0335541 [paper, repository]

Using machine learning for detection of Parkinson's disease and mild cognitive impairment.

Journal: PloS one

Authors' code: Zenodo 17195713 (CC-BY-4.0)

Status: code verified, 43 files readable

[159] doi:10.1016/j.nicl.2025.103912 [paper, data]

Amyloid PET predicts atrophy in older adults without dementia: Results from the AMYPAD Prognostic & Natural History study.

Journal: NeuroImage. Clinical

Status: data only, 2 datasets cited

Tuesday, 18 November 2025 (2 papers)

[160] doi:10.1038/s41598-025-28456-x [paper, repository]

Functional PET for mapping metabolic dynamics in Parkinson's disease.

Journal: Scientific reports

Authors' code: ruppertm/fPETDynamics (no license)

Status: code verified

[161] doi:10.1093/braincomms/fcaf449 [paper, repository]

Characterizing the onset and progression of Alzheimer's pathologies using amyloid and tau PET imaging and plasma p-tau217.

Journal: Brain communications

Authors' code: Betthauser-Neuro-Lab/SILA-AD-Biomarker (GPL-3.0)

Status: code verified, 11 files readable, 2 matches

Friday, 14 November 2025 (1 paper)

[162] doi:10.1162/imag.a.1011 [paper, repository]

A reference tissue implementation of Simultaneous Multifactor Bayesian Analysis (SiMBA) of PET time activity curve data.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: mathesong/SiMBA_Ref_Materials (MIT), cran.r-project.org/package=nls.multstart (no license)

Status: code verified, 4 files readable

Wednesday, 12 November 2025 (1 paper)

[163] doi:10.1186/s13195-025-01872-x [paper, repository]

Generalizable MRI normative modelling to detect age-inappropriate neurodegeneration.

Journal: Alzheimer's research & therapy

Authors' code: brainchart/lifespan (no license), brainchart/Lifespan_Imperial (no license)

Status: code verified, 27 files readable, 5 matches

Thursday, 6 November 2025 (1 paper)

[164] doi:10.1038/s41593-025-02103-0 [paper, repository]

Microglia modulate Aβ-dependent astrocyte reactivity in Alzheimer's disease.

Journal: Nature neuroscience

Authors' code: Tyrev/2025_JPFS_NatureNeuroscience (no license)

Status: code verified, 8 files readable, 6 matches

Tuesday, 4 November 2025 (1 paper)

[165] doi:10.1038/s41598-025-21596-0 [paper, repository]

Longitudinal functional connectivity during rest and task is differentially related to Alzheimer's pathology and episodic memory in older adults.

Journal: Scientific reports

Authors' code: villeneuvelab/vlpp (MIT), fislarissa/MTL_PMC_rs_and_task_FC (MIT), OSF bgny5 (no license), OSF nfrb5 (no license)

Status: code verified, 41 files readable, 10 matches

Monday, 3 November 2025 (1 paper)

[166] doi:10.1007/s00259-025-07605-4 [paper, data]

Exceptional brain PET images from the NeuroEXPLORER: scans with targeted radiopharmaceuticals and comparison to HRRT.

Journal: European journal of nuclear medicine and molecular imaging

Status: data only, 1 dataset cited

Saturday, 1 November 2025 (2 papers)

[167] doi:10.1093/brain/awaf279 [paper, repository]

Connectivity as a universal predictor of tau progression in atypical Alzheimer's disease.

Journal: Brain : a journal of neurology

Authors' code: OssenKoppeLab/HdeBruin_Atypical_AD (no license)

Status: code verified, 1 file readable

[168] doi:10.1093/cercor/bhaf293 [paper, repository]

10-year longitudinal dopamine D2-receptor losses are associated with cognitive decline in healthy aging.

Journal: Cerebral cortex (New York, N.Y. : 1991)

Authors' code: Zenodo 15585679 (CC-BY-4.0)

Status: code verified

Wednesday, 29 October 2025 (1 paper)

[169] doi:10.1371/journal.pone.0332801 [paper, data]

Lower Firmicutes abundance in gut microbiota associated with amyloid-β positivity in older adults in Japan as assessed by positron emission tomography.

Journal: PloS one

Status: data only, 1 dataset cited

Friday, 24 October 2025 (1 paper)

[170] doi:10.1038/s41467-025-64414-x [paper, repository]

Simultaneous EEG-PET-MRI identifies temporally coupled and spatially structured brain dynamics across wakefulness and NREM sleep.

Journal: Nature communications

Authors' code: CANDYlaboratory/fPET-Baseline-Characterization (no license)

Status: code verified, 6 files readable, 1 match

Wednesday, 22 October 2025 (1 paper)

[171] doi:10.7554/elife.105815 [paper, repository]

Longitudinal assessment of DREADD expression and efficacy in the monkey brain.

Journal: eLife

Authors' code: minamimoto-lab/2024-nagai-longitudinalpet (no license)

Status: code verified, 7 files readable, 5 matches

Tuesday, 21 October 2025 (1 paper)

[172] doi:10.1038/s41598-025-20587-5 [paper]

Implication of dopamine transporter and electroencephalography biomarkers in dementia with lewy bodies.

Journal: Scientific reports

Status: code on request

Saturday, 18 October 2025 (1 paper)

[173] doi:10.1007/s00259-025-07620-5 [paper, repository]

Aberrant type 2 dopamine and mu-opioid receptor availability in autism spectrum disorder.

Journal: European journal of nuclear medicine and molecular imaging

Authors' code: tkkarjal/magia (MIT)

Status: code verified, 172 files readable, 1 match

Friday, 17 October 2025 (1 paper)

[174] doi:10.1371/journal.pcbi.1013583 [paper, repository]

Multiscale networks in Alzheimer's disease identify brain hypometabolism as central across biological scales.

Journal: PLoS computational biology

Authors' code: dsb-lab/multilayerAD (no license)

Status: code verified, 40 files readable, 9 matches

Monday, 13 October 2025 (1 paper)

[175] doi:10.7554/elife.100937 [paper, repository]

Shared functional organization between pulvinar-cortical and cortico-cortical connectivity and its structural and molecular imaging correlates.

Journal: eLife

Authors' code: sensein/mapalign (Apache-2.0), BrainMappingLab/Pulvinar-Gradients-Multimodal (MIT)

Status: code verified, 60 files readable, 14 matches

Friday, 10 October 2025 (1 paper)

[176] doi:10.1038/s44321-025-00316-1 [paper, repository]

Glia inflammation and cell death pathways drive disease progression in preclinical and early AD.

Journal: EMBO molecular medicine

Authors' code: tnl-mcsa/code-and-material-for-publications (CC0-1.0)

Status: code verified, 3 files readable, 4 matches

Thursday, 9 October 2025 (1 paper)

[177] doi:10.3390/genes16101174 [paper, data]

Bridging Genotype to Phenotype in <i>KMT5B</i>-Related Syndrome: Evidence from RNA-Seq, <sup>18</sup>FDG-PET, Clinical Deep Phenotyping in Two New Cases, and a Literature Review.

Journal: Genes

Status: data only, 1 dataset cited

Tuesday, 7 October 2025 (1 paper)

[178] doi:10.1007/s00259-025-07576-6 [paper]

Revealing the hidden: A systematic review and meta-analysis of FAPI-based tracers imaging for brain metastatic lesions.

Journal: European journal of nuclear medicine and molecular imaging

Status: code on request

Monday, 6 October 2025 (1 paper)

[179] doi:10.1038/s43856-025-01121-0 [paper, repository]

Integrating direct electrical stimulation with brain connectivity predicts lesion-induced language impairment and recovery.

Journal: Communications medicine

Authors' code: Zenodo 16418628 (CC-BY-4.0), FBK-NILab/intraopmap (MIT), FBK-NILab/White-Matter-DES-Brain-Maps (CC0-1.0)

Status: code verified, 88 files readable, 11 matches

Wednesday, 1 October 2025 (5 papers)

[180] doi:10.1093/brain/awaf179 [paper, repository]

Selective vulnerability and resilience to Alzheimer's disease tauopathy as a function of genes and the connectome.

Journal: Brain : a journal of neurology

Authors' code: Raj-Lab-UCSF (no license)

Status: code verified

[181] doi:10.1002/alz.70653 [paper, repository]

The PREVENT-AD cohort: Accelerating Alzheimer's disease research and treatment in Canada and beyond.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: villeneuvelab/vlpp (MIT)

Status: code verified, 37 files readable

[182] doi:10.1093/braincomms/fcaf337 [paper, repository]

Systemic increase of AMPA receptors associated with cognitive impairment of long COVID.

Journal: Brain communications

Authors' code: stsugawa/AMPA_COVID_PLS (no license)

Status: code verified, 3 files readable

[183] doi:10.1002/alz.70765 [paper]

Body mass index and blood volume influence plasma biomarkers and positron emission tomography classification in preclinical Alzheimer's disease.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Status: code on request

[184] doi:10.1002/alz.70762 [paper, repository]

Cortical thickness subtypes in cognitively unimpaired individuals: Differential network and transcriptomic vulnerability to cortical thinning.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: rmarkello/abagen (BSD-3-Clause)

Status: code verified, 55 files readable, 4 matches

Tuesday, 30 September 2025 (1 paper)

[185] doi:10.1007/s00234-025-03781-0 [paper, repository]

Spatiotemporal patterns of amyloid deposition as prognostic markers of Alzheimer's disease.

Journal: Neuroradiology

Authors' code: ucl-pond/pySuStaIn (MIT)

Status: code verified, 19 files readable, 6 matches

Friday, 26 September 2025 (1 paper)

[186] doi:10.1162/imag.a.903 [paper, repository]

Spatial distribution of hyperpolarized [1-<sup>13</sup>C]pyruvate MRI and metabolic PET in the human brain.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: Zenodo 14927726 (CC-BY-4.0)

Status: code verified

Thursday, 25 September 2025 (1 paper)

[187] doi:10.1016/j.ibneur.2025.09.007 [paper]

Serum amino acid levels are associated with brain hypometabolism in patients across the Alzheimer's disease continuum.

Journal: IBRO neuroscience reports

Status: code on request

Wednesday, 24 September 2025 (1 paper)

[188] doi:10.1016/j.molpha.2025.100075 [paper, repository]

Distinctive patterns of G protein coupling induced by the structurally similar 5-HT<sub>2A</sub> receptor ligands ketanserin and altanserin in human prefrontal cortex.

Journal: Molecular pharmacology

Authors' code: getcontacts/getcontacts (Apache-2.0)

Status: code verified, 48 files readable

Friday, 19 September 2025 (1 paper)

[189] doi:10.1162/netn.a.23 [paper, repository]

Stable brain PET metabolic networks using a multiple sampling scheme.

Journal: Network neuroscience (Cambridge, Mass.)

Authors' code: guischu09/MultipleSampling-MBN (no license)

Status: code verified, 207 files readable, 3 matches

Wednesday, 17 September 2025 (2 papers)

[190] doi:10.1038/s42003-025-08716-2 [paper]

Cholinergic network modulation in disinhibited eating behavior.

Journal: Communications biology

Status: code on request

[191] doi:10.3389/fnume.2025.1641215 [paper, repository]

Fast PET reconstruction with variance reduction and prior-aware preconditioning.

Journal: Frontiers in nuclear medicine

Authors' code: SyneRBI/PETRIC-MaGeZ (Apache-2.0)

Status: code verified, 58 files readable, 4 matches

Thursday, 11 September 2025 (1 paper)

[192] doi:10.1093/braincomms/fcaf345 [paper, repository]

Sulcal morphology in former American football players.

Journal: Brain communications

Authors' code: Zenodo 3666802 (CC-BY-4.0), Zenodo 3258854 (CC-BY-4.0), pnlbwh/pnlnipype (other), pnlbwh/luigi-pnlpipe (other)

Status: code verified, 110 files readable, 3 matches

Monday, 8 September 2025 (1 paper)

[193] doi:10.1177/0271678x251370831 [paper, repository]

A unified approach for identifying PET-based neuronal activation and molecular connectivity with the functional PET toolbox.

Journal: Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism

Authors' code: NeuroimagingLabsMUV/fPET-toolbox (GPL-2.0)

Status: code verified, 95 files readable, 6 matches

Saturday, 6 September 2025 (1 paper)

[194] doi:10.1038/s41380-025-03204-9 [paper, data]

GABA_A receptor availability in clinical high-risk and first-episode psychosis: a [¹¹C]Ro15-4513 positron emission tomography study.

Journal: Molecular psychiatry

Status: code on request, 1 dataset cited

Friday, 5 September 2025 (1 paper)

[195] doi:10.1038/s41467-025-63564-2 [paper, repository]

Hemispheric asymmetry of tau pathology is related to asymmetric amyloid deposition in Alzheimer's Disease.

Journal: Nature communications

Authors' code: Zenodo 16759856 (GPL-3.0), teanijarv/phd-neurodegeneration-imaging (GPL-3.0)

Status: code verified, 52 files readable, 29 matches

Monday, 1 September 2025 (3 papers)

[196] doi:10.1176/appi.ajp.20240512 [paper, data]

Reduced Brain Iron and Striatal Hyperdopaminergia in Schizophrenia: A Quantitative Susceptibility Mapping MRI and PET Study.

Journal: The American journal of psychiatry

Status: data only, 1 dataset cited

[197] doi:10.1002/alz.70658 [paper, repository]

Estimating the preclinical Alzheimer's disease course with multimodal data.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: dtownsend2022/c-time (no license)

Status: empty repository, 1 file readable

[198] doi:10.1002/alz.70733 [paper, repository]

Neuroimaging markers of dementia across race/ethnicity and sex/gender using an intersectional approach within the HABS-HD cohort.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: michelle-caunca/HABSRaceEthGenImg (no license), apps.unthsc.edu/itr/habs-hd (no license)

Status: code verified, 6 files readable, 6 matches

Friday, 29 August 2025 (1 paper)

[199] doi:10.1002/advs.202508161 [paper, repository]

Targeting ROCK2 to Restore Epileptic Synaptic Networks via Mitophagy Activation: Insights from Translational Imaging of SV2A In Vivo.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Authors' code: echumin/CovNet (no license)

Status: code verified, 218 files readable, 3 matches

Thursday, 28 August 2025 (1 paper)

[200] doi:10.1162/imag.a.110 [paper, repository]

On the analysis of functional PET (fPET)-FDG: Baseline mischaracterization can introduce artifactual metabolic (de)activations.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: CANDYlaboratory/fPET-Baseline-Characterization (no license)

Status: code verified, 6 files readable, 5 matches

Saturday, 23 August 2025 (1 paper)

[201] doi:10.3390/brainsci15090908 [paper, repository]

Predicting Regional Cerebral Blood Flow Using Voxel-Wise Resting-State Functional MRI.

Journal: Brain sciences

Authors' code: kehongjie/rsfMRI_CBF (no license)

Status: code verified, 4 files readable, 1 match

Friday, 22 August 2025 (1 paper)

[202] doi:10.1038/s41398-025-03519-9 [paper, repository]

Cannabinoid 1 receptor availability in posttraumatic stress disorder: A positron emission tomography study.

Journal: Translational psychiatry

Authors' code: KoremNSN/CB1rPTSD (no license)

Status: code verified, 5 files readable

Thursday, 14 August 2025 (2 papers)

[203] doi:10.1016/j.acra.2025.07.061 [paper, repository]

Novel Non-Invasive PET Imaging of Reactive Oxygen Species Using [18 F]ROStrace in Three Proteinopathy-Associated Neurodegenerative Mouse Models.

Journal: Academic radiology

Authors' code: Evangall/fiji-scripts (no license)

Status: empty repository, 1 file readable

[204] doi:10.1016/j.isci.2025.113371 [paper]

Distribution of glutamate and glutamine in tumor microenvironments of brain metastasis: Insights from biochemical analysis and molecular imaging.

Journal: iScience

Status: code on request

Monday, 11 August 2025 (1 paper)

[205] doi:10.1038/s41467-025-62590-4 [paper, repository]

AI-driven fusion of multimodal data for Alzheimer's disease biomarker assessment.

Journal: Nature communications

Authors' code: vkola-lab/ncomms2025 (AGPL-3.0)

Status: code verified, 115 files readable, 22 matches

Saturday, 9 August 2025 (1 paper)

[206] doi:10.1038/s42003-025-08602-x [paper, repository]

Resynchronization of microglial activity in the brain is associated with restoration of motor function in Parkinson's disease.

Journal: Communications biology

Authors' code: pmod.com (no license), carimas.fi (no license)

Status: code verified

Tuesday, 5 August 2025 (1 paper)

[207] doi:10.1007/s00259-025-07454-1 [paper]

First evaluation in multiple sclerosis using PET tracer [<sup>18</sup>F]3F4AP demonstrates heterogeneous binding across lesions.

Journal: European journal of nuclear medicine and molecular imaging

Status: code on request

Friday, 1 August 2025 (1 paper)

[208] doi:10.1002/alz.70551 [paper, repository]

Factors associated with age at tau pathology onset and time from tau onset to dementia in Alzheimer's disease.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: Betthauser-Neuro-Lab/SILA-AD-Biomarker (GPL-3.0), adni.loni.usc.edu/data-samples/access-data (no license)

Status: code verified, 11 files readable, 1 match

Wednesday, 30 July 2025 (1 paper)

[209] doi:10.1038/s42003-025-08492-z [paper, repository]

The neuroreceptors and transporters underlying spontaneous brain activity.

Journal: Communications biology

Authors' code: OSF 58vxd (no license)

Status: code verified, 3 files readable, 3 matches

Friday, 25 July 2025 (1 paper)

[210] doi:10.1021/acs.jmedchem.5c00457 [paper, data]

Design, Synthesis and Preclinical Evaluation of a Brain-Permeable PET Tracer for P2Y12 Receptor Imaging in the Brain.

Journal: Journal of medicinal chemistry

Status: data only, 2 datasets cited

Tuesday, 22 July 2025 (1 paper)

[211] doi:10.1038/s41467-025-61927-3 [paper, repository]

Transcriptomic decoding of surface-based imaging phenotypes and its application to pharmacotranscriptomics.

Journal: Nature communications

Authors' code: christineecker/fsnulls (no license), christineecker/fsdecode (no license), gin.g-node.org/sphache/decodegaba (no license)

Status: code verified, 63 files readable, 11 matches

Monday, 21 July 2025 (1 paper)

[212] doi:10.1371/journal.pbio.3003241 [paper, repository]

Personalised regional modelling predicts tau progression in the human brain.

Journal: PLoS biology

Authors' code: Zenodo 15389493 (CC-BY-4.0), PavanChaggar/local-fkpp (CC-BY-4.0)

Status: code verified, 42 files readable

Thursday, 17 July 2025 (2 papers)

[213] doi:10.1038/s41398-025-03467-4 [paper, repository]

Neural correlates differ between crystallized and fluid intelligence in adolescents.

Journal: Translational psychiatry

Authors' code: netneurolab/abagen (BSD-3-Clause), juryxy/juspace (no license)

Status: code verified, 76 files readable, 1 match

[214] doi:10.1007/s00401-025-02908-0 [paper, data]

Loss of the lysosomal lipid flippase ATP10B leads to progressive dopaminergic neurodegeneration and parkinsonian motor deficits.

Journal: Acta neuropathologica

Status: data only, 2 datasets cited

Thursday, 10 July 2025 (1 paper)

[215] doi:10.1038/s41467-025-61497-4 [paper, repository]

Synaptic loss pattern is constrained by brain connectome and modulated by phosphorylated tau in Alzheimer's disease.

Journal: Nature communications

Authors' code: yluan-seu/SV2A_propagation (no license), iDIO4dMRI/iDIO (no license), Zenodo 15609808 (CC-BY-4.0)

Status: code verified, 22 files readable, 13 matches

Wednesday, 2 July 2025 (1 paper)

[216] doi:10.1089/neur.2025.0052 [paper]

Identifying a Biological Signature of Trauma-Related Neurodegeneration Following Repeated Traumatic Brain Injuries Compared with Healthy Controls.

Journal: Neurotrauma reports

Status: code on request

Tuesday, 1 July 2025 (6 papers)

[217] doi:10.1038/s41467-025-60815-0 [paper, repository]

A multicenter longitudinal study of cholinergic subgroups in Parkinson disease.

Journal: Nature communications

Authors' code: codeocean:3508354 (no license)

Status: code found, still to be checked

[218] doi:10.1002/alz.70347 [paper, repository]

Regional effects of gantenerumab on neuroimaging biomarkers in the DIAN-TU-001 trial.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: ysu001/PUP (BSD-3-Clause)

Status: code verified, 277 files readable

[219] doi:10.3748/wjg.v31.i27.109239 [paper, data]

Translocator protein facilitates neutrophil-mediated mucosal inflammation in inflammatory bowel diseases.

Journal: World journal of gastroenterology

Status: data only, 1 dataset cited

[220] doi:10.1002/dad2.70159 [paper, repository]

Classifying mild cognitive impairment from normal cognition: fMRI complexity matches tau PET performance.

Journal: Alzheimer's & dementia (Amsterdam, Netherlands)

Authors' code: kayjann/complexity (no license)

Status: code verified, 39 files readable

[221] doi:10.1002/dad2.70165 [paper, repository]

Accounting for white matter uptake improves between tracer agreement in amyloid PET.

Journal: Alzheimer's & dementia (Amsterdam, Netherlands)

Authors' code: ysu001/PUP (BSD-3-Clause)

Status: code verified, 277 files readable

[222] doi:10.1002/dad2.70176 [paper, repository]

Alzheimer's disease neuropathology and longitudinal change in subjective cognitive complaints.

Journal: Alzheimer's & dementia (Amsterdam, Netherlands)

Authors' code: bilgelm/PET-and-CFQ (no license)

Status: code verified, 3 files readable, 12 matches

Saturday, 28 June 2025 (1 paper)

[223] doi:10.1038/s41531-025-01033-9 [paper, repository]

Physical activity and network attack tolerance preserve motor function in Parkinson's disease: A pilot study.

Journal: NPJ Parkinson's disease

Authors' code: Asendorfa/NAT (no license)

Status: code verified, 4 files readable, 3 matches

Friday, 20 June 2025 (1 paper)

[224] doi:10.1002/ana.27285 [paper, repository]

Timing of Changes in Alzheimer's Disease Plasma Biomarkers as Assessed by Amyloid and Tau PET Clocks.

Journal: Annals of neurology

Authors' code: cind/alz-timing-mila-aloma-et-al-2025 (no license)

Status: code verified, 6 files readable, 8 matches

Thursday, 19 June 2025 (2 papers)

[225] doi:10.4103/nrr.nrr-d-24-01260 [paper, data]

Role of miRNAs from mesenchymal stem cell-derived extracellular vesicles in neuroinflammation and behavioral impairments induced by chronic alcohol consumption in female mice.

Journal: Neural regeneration research

Status: data only, 1 dataset cited

[226] doi:10.1093/braincomms/fcaf249 [paper, repository]

Cerebral blood flow is associated with plasma and PET biomarkers of tau pathology in middle age.

Journal: Brain communications

Authors' code: OSF frbkj (no license)

Status: code verified

Wednesday, 18 June 2025 (3 papers)

[227] doi:10.1016/j.nicl.2025.103814 [paper, repository]

Medulla oblongata dominated synaptic density network degeneration in amyotrophic lateral sclerosis.

Journal: NeuroImage. Clinical

Authors' code: RongLi1120/KLSE (no license)

Status: code verified, 4 files readable, 1 match

[228] doi:10.1177/15357597251332191 [paper, repository]

Imaging Epilepsy: Past, Passing, and to Come.

Journal: Epilepsy currents

Authors' code: MELDProject/meld_graph (other)

Status: code verified, 108 files readable

[229] doi:10.1093/braincomms/fcaf227 [paper, repository]

Changes in glucose metabolism in essential tremor: within and beyond the cerebello-thalamo-cortical circuit.

Journal: Brain communications

Authors' code: jrdalenberg/PETBrainPreprocessing (Apache-2.0)

Status: code verified, 9 files readable, 3 matches

Friday, 6 June 2025 (1 paper)

[230] doi:10.1186/s40658-025-00760-5 [paper, data]

Impact of image reconstruction on cerebral blood flow measured with <sup>15</sup>O-water positron emission tomography.

Journal: EJNMMI physics

Status: data only, 2 datasets cited

Tuesday, 3 June 2025 (3 papers)

[231] doi:10.1007/s11682-025-01023-8 [paper, repository]

White matter microstructural alterations and brain metabolism distributions in Parkinson's disease.

Journal: Brain imaging and behavior

Authors' code: jyeatman/AFQ (gnu)

Status: code verified, 165 files readable, 6 matches

[232] doi:10.1007/s00401-025-02890-7 [paper, repository]

Immunohistochemical evaluation of a trial of gantenerumab or solanezumab in dominantly inherited Alzheimer disease.

Journal: Acta neuropathologica

Authors' code: ysu001/PUP (BSD-3-Clause)

Status: code verified, 277 files readable

[233] doi:10.1038/s41467-025-60187-5 [paper]

Forebrain neural progenitors effectively integrate into host brain circuits and improve neural function after ischemic stroke.

Journal: Nature communications

Status: data only

Sunday, 1 June 2025 (3 papers)

[234] doi:10.1093/brain/awaf008 [paper]

Anterior-temporal network hyperconnectivity is key to Alzheimer's disease: from ageing to dementia.

Journal: Brain : a journal of neurology

Status: code on request

[235] doi:10.1002/hbm.70253 [paper]

Single-Subject Network Analysis of FDOPA PET in Parkinson's Disease and Psychosis Spectrum.

Journal: Human brain mapping

Status: code on request

[236] doi:10.1002/alz.70270 [paper, repository]

Brain tissue electrical conductivity as a promising biomarker for dementia assessment using MRI.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: eptlib.github.io/methods (no license)

Status: code verified

Tuesday, 27 May 2025 (1 paper)

[237] doi:10.7150/ijbs.103194 [paper, repository]

Radio-chemotherapy and metformin selectively modulate the heterogeneous landscape of glioma with ribosome biogenesis, long non coding RNA and immune-escape markers as major player.

Journal: International journal of biological sciences

Authors' code: ste-depo/scRNA_2024_mouse_glioma (no license)

Status: code verified, 4 files readable, 3 matches

Monday, 26 May 2025 (2 papers)

[238] doi:10.1038/s41597-025-04847-7 [paper, data]

The Dallas Lifespan Brain Study: A Comprehensive Adult Lifespan Data Set of Brain and Cognitive Aging.

Journal: Scientific data

Status: data only, 2 datasets cited

[239] doi:10.3390/diagnostics15111327 [paper, data]

Computational Risk Stratification of Preclinical Alzheimer's in Younger Adults.

Journal: Diagnostics (Basel, Switzerland)

Status: data only, 2 datasets cited

Friday, 23 May 2025 (2 papers)

[240] doi:10.1186/s13550-025-01253-3 [paper, repository]

Non-invasive arterial input function estimation using an MRA atlas and machine learning.

Journal: EJNMMI research

Authors' code: supp:PMC12102434/13550_2025_1253_MOESM2_ESM.ipynb (no license), supp:PMC12102434/13550_2025_1253_MOESM3_ESM.m (no license)

Status: code verified, 2 files readable, 2 matches

[241] doi:10.1093/braincomms/fcaf200 [paper, repository]

Brain glymphatic fluid mapping in Alzheimer's disease: a human MRI and PET study.

Journal: Brain communications

Authors' code: Haoyulance/WPSS (other), jinghangli98/wmh_seg (no license)

Status: code verified, 22 files readable, 1 match

Sunday, 18 May 2025 (1 paper)

[242] doi:10.1101/2025.05.14.654095 [paper, repository]

In-vivo evidence for increased tau deposition in temporal lobe epilepsy

Journal: bioRxiv (preprint)

Authors' code: MICA-MNI/2025_in-vivo_tauPET-mk6240_TLE (CC-BY-NC-4.0)

Status: code verified, 5 files readable, 3 matches

Saturday, 17 May 2025 (1 paper)

[243] doi:10.1038/s41598-025-02039-2 [paper]

Brain metabolic imaging-based model identifies cognitive stability in prodromal Alzheimer's disease.

Journal: Scientific reports

Status: code on request

Thursday, 15 May 2025 (2 papers)

[244] doi:10.7554/elife.97864 [paper, data]

Mapping serotonergic dynamics using drug-modulated molecular connectivity in rats.

Journal: eLife

Status: data only, 1 dataset cited

[245] doi:10.1111/epi.18447 [paper, repository]

Seizure-onset zone lateralization in temporal lobe epilepsy using 7T rs-fMRI: Direct comparison with 3T rs-fMRI.

Journal: Epilepsia

Authors' code: penn-cnt/3t_7t (no license)

Status: code verified, 5 files readable, 3 matches

Monday, 12 May 2025 (2 papers)

[246] doi:10.1038/s41531-025-00982-5 [paper, repository]

Baseline [<sup>18</sup>F]FP-CIT PET-based deep learning prediction of levodopa-induced dyskinesia in Parkinson's disease.

Journal: NPJ Parkinson's disease

Authors' code: shap/shap (MIT), mi2rl/LIDprediction (MIT)

Status: code verified, 108 files readable, 7 matches

[247] doi:10.1038/s41531-025-00944-x [paper]

Cortical microstructural abnormalities in dementia with Lewy bodies and their associations with Alzheimer's disease copathologies.

Journal: NPJ Parkinson's disease

Status: code on request

Saturday, 10 May 2025 (1 paper)

[248] doi:10.1016/j.nicl.2025.103800 [paper, data]

Assessment of changes in synaptic density in the zQ175DN mouse model of Huntington's disease: a [<sup>18</sup>F]SynVesT-1 study.

Journal: NeuroImage. Clinical

Status: data only, 1 dataset cited

Tuesday, 6 May 2025 (1 paper)

[249] doi:10.1186/s13024-025-00841-0 [paper, data]

Cerebrospinal fluid proteome profiling across the Alzheimer's disease continuum: a step towards solving the equation for 'X'.

Journal: Molecular neurodegeneration

Status: data only, 3 datasets cited

Friday, 2 May 2025 (1 paper)

[250] doi:10.1162/imag_a_00562 [paper, repository]

Estimation of oxygen extraction fraction based on hemodynamic measurements using DSC-MRI.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: gitlab.utu.fi/vesoik/tpcclib (GPL-3.0)

Status: code verified, 1,277 files readable, 4 matches

Thursday, 1 May 2025 (1 paper)

[251] doi:10.1002/alz.70170 [paper, data]

Multimodal spatial gradients to explain regional susceptibility to fibrillar tau in Alzheimer's disease.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Status: data only, 1 dataset cited

Tuesday, 29 April 2025 (1 paper)

[252] doi:10.1038/s41591-025-03625-7 [paper, repository]

Broad rim lesions are a new pathological and imaging biomarker for rapid disease progression in multiple sclerosis.

Journal: Nature medicine

Authors' code: walter-ca/MS-lesions_code (MIT)

Status: code verified, 18 files readable, 6 matches

Friday, 25 April 2025 (2 papers)

[253] doi:10.1007/s00259-025-07257-4 [paper, repository]

Tau profiling across Alzheimer's disease staging reveals vulnerability to disease pathophysiology.

Journal: European journal of nuclear medicine and molecular imaging

Authors' code: glebbezgin/surfparc (no license)

Status: empty repository, 1 file readable

[254] doi:10.1186/s13195-025-01742-6 [paper, repository]

Differential effects of aging, Alzheimer's pathology, and APOE4 on longitudinal functional connectivity and episodic memory in older adults.

Journal: Alzheimer's research & therapy

Authors' code: villeneuvelab/vlpp (MIT), fislarissa/MTL_PMC_longitudinal_rsFC (MIT), OSF 6syqt (no license)

Status: code verified, 40 files readable, 6 matches

Thursday, 24 April 2025 (1 paper)

[255] doi:10.1007/s11357-025-01658-x [paper, repository]

Normal cerebral oxygen consumption and lactate levels in patients with Alzheimer's disease and Lewy body dementia.

Journal: GeroScience

Authors' code: MarkVestergaard/PCMCalculator (MIT), MarkVestergaard/SBOCalculator (MIT)

Status: code verified, 6 files readable, 5 matches

Wednesday, 23 April 2025 (2 papers)

[256] doi:10.1523/jneurosci.1693-24.2025 [paper, repository]

Methylphenidate Promotes a Frontoparietal-Dominant Brain State Improving Cognitive Performance: A Randomized Trial.

Journal: The Journal of neuroscience : the official journal of the Society for Neuroscience

Authors' code: WizardYan/MP_PET_fMRI (CC-BY-4.0)

Status: code verified, 214 files readable, 6 matches

[257] doi:10.1101/2025.04.17.648358 [paper, repository]

Brain network dynamics determine tau presence while regional vulnerability governs tau load in Alzheimer’s disease

Journal: bioRxiv (preprint)

Authors' code: netneurolab/hansenmanynetworks (no license), DeMONLab-BioFINDER/Xiao_Tau_simulation_SIR (no license), ucl-pond (no license)

Status: code verified, 15 files readable, 4 matches

Saturday, 19 April 2025 (1 paper)

[258] doi:10.1101/2025.04.15.648728 [paper, repository]

Hemispheric Asymmetry of Tau Pathology is Related to Asymmetric Amyloid Deposition in Alzheimer’s Disease

Journal: bioRxiv (preprint)

Authors' code: teanijarv/phd-neurodegeneration-imaging (GPL-3.0), Zenodo 6834519 (Apache-2.0), nipy/nipype (Apache-2.0)

Status: code verified, 2,815 files readable, 27 matches

Friday, 18 April 2025 (2 papers)

[259] doi:10.1126/sciadv.adu0975 [paper, data]

Hippocampal perineuronal net degradation identifies prefrontal and striatal circuits involved in schizophrenia-like changes in marmosets.

Journal: Science advances

Status: data only, 1 dataset cited

[260] doi:10.1038/s42003-025-08078-9 [paper, repository]

Network control energy reductions under DMT relate to serotonin receptors, signal diversity, and subjective experience.

Journal: Communications biology

Authors' code: singlesp/DMT_NCT (no license), Zenodo 15177511 (CC-BY-4.0)

Status: code verified, 45 files readable, 4 matches

Tuesday, 15 April 2025 (1 paper)

[261] doi:10.3389/fnins.2025.1547010 [paper, repository]

Relations between neurometabolism and clinical biomarkers in patients with metabolic disease.

Journal: Frontiers in neuroscience

Authors' code: IHEP-Brain-Imaging/Spatial-Normalization-of-Brain-PET-Images (GPL-3.0)

Status: code verified, 28 files readable, 2 matches

Friday, 11 April 2025 (1 paper)

[262] doi:10.1002/ijc.35441 [paper, repository]

A strategy for multimodal integration of transcriptomics, proteomics, and radiomics data for the prediction of recurrence in patients with IDH-mutant gliomas.

Journal: International journal of cancer

Authors' code: gitlab.inria.fr/cetchega/transcan_idh-mutant_lgg_radiomics (no license)

Status: code verified, 10 files readable, 5 matches

Wednesday, 9 April 2025 (1 paper)

[263] doi:10.1111/epi.18402 [paper, repository]

Surgical targeting of lateralized <sup>18</sup>F-fluorodeoxyglucose positron emission tomography hypometabolism relates to long-term epilepsy surgery outcomes.

Journal: Epilepsia

Authors' code: vmorgan-lab/pet-drs (MIT), aimn.it/brain-fdg (no license)

Status: code verified, 3 files readable, 2 matches

Sunday, 6 April 2025 (1 paper)

[264] doi:10.1038/s41380-025-02960-y [paper, data]

Striatal dopamine tone is positively associated with adiposity in humans as determined by PET using dual dopamine type-2 receptor antagonist tracers.

Journal: Molecular psychiatry

Status: data only, 1 dataset cited

Wednesday, 2 April 2025 (1 paper)

[265] doi:10.1038/s41467-025-57751-4 [paper, repository]

Cross-ancestry genome-wide association study identifies implications of SORL1 in cerebral beta-amyloid deposition.

Journal: Nature communications

Authors' code: FelixKrueger/TrimGalore (GPL-3.0), hail-is/hail (MIT), RajLabMSSM/QTL-mapping-pipeline (no license), Zenodo 14791596 (CC-BY-4.0), wonlab101/abetagwas_public_release (no license)

Status: code verified, 1,729 files readable, 11 matches

Tuesday, 1 April 2025 (2 papers)

[266] doi:10.1002/alz.70143 [paper, repository]

Analyzing heterogeneity in Alzheimer disease using multimodal normative modeling on imaging-based ATN biomarkers.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: ysu001/PUP (BSD-3-Clause)

Status: code verified, 277 files readable

[267] doi:10.1002/alz.70171 [paper, data]

Exploring inflammation-related protein expression and its relationship with TSPO PET in Alzheimer's disease.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Status: data only, 1 dataset cited

Monday, 31 March 2025 (1 paper)

[268] doi:10.1186/s40658-025-00744-5 [paper]

Generating synthetic brain PET images of synaptic density based on MR T1 images using deep learning.

Journal: EJNMMI physics

Status: code on request

Sunday, 30 March 2025 (1 paper)

[269] doi:10.1038/s41467-025-58356-7 [paper, repository]

Quantitative PET imaging and modeling of molecular blood-brain barrier permeability.

Journal: Nature communications

Authors' code: kjch03/bbb-permeability-pet (no license), Zenodo 14954958 (CC-BY-4.0)

Status: code verified, 10 files readable, 2 matches

Monday, 24 March 2025 (1 paper)

[270] doi:10.1073/pnas.2423785122 [paper, data]

Neural basis for individual differences in the attention-enhancing effects of methylphenidate.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Status: data only, 1 dataset cited

Thursday, 20 March 2025 (1 paper)

[271] doi:10.1016/j.xcrm.2025.102031 [paper, repository]

Cerebrospinal fluid proteomics identification of biomarkers for amyloid and tau PET stages.

Journal: Cell reports. Medicine

Authors' code: Zenodo 14866417 (CC-BY-4.0), nanxstats/ggsci (GPL-3.0)

Status: code verified, 43 files readable, 1 match

Monday, 17 March 2025 (1 paper)

[272] doi:10.1186/s13041-025-01192-z [paper, data]

Moderate ethanol exposure disrupts energy homesotasis between central and peripheral system in APP/PS1 mice.

Journal: Molecular brain

Status: data only, 1 dataset cited

Sunday, 16 March 2025 (2 papers)

[273] doi:10.1007/s12149-025-02038-3 [paper, repository]

Fully automatic categorical analysis of striatal subregions in dopamine transporter SPECT using a convolutional neural network.

Journal: Annals of nuclear medicine

Authors' code: ThomasBudd/dat_spect_ud (MIT)

Status: code verified, 10 files readable

[274] doi:10.1186/s13550-025-01210-0 [paper, data]

Multinomial logistic regression algorithm for the classification of patients with parkinsonisms.

Journal: EJNMMI research

Status: code on request, 3 datasets cited

Tuesday, 11 March 2025 (1 paper)

[275] doi:10.1038/s41467-025-57682-0 [paper, repository]

Major depressive disorder on a neuromorphic continuum.

Journal: Nature communications

Authors' code: netneurolab/neuromaps (CC-BY-NC-SA-4.0)

Status: code verified, 50 files readable

Monday, 10 March 2025 (1 paper)

[276] doi:10.1093/braincomms/fcaf104 [paper, repository]

Abnormalities of iron homeostasis and the dopaminergic system in Tourette syndrome revealed by 7T MRI and PET.

Journal: Brain communications

Authors' code: G-K-O/Iron-Dopamine-GTS_scripts (no license)

Status: code verified, 26 files readable, 4 matches

Wednesday, 5 March 2025 (1 paper)

[277] doi:10.1126/sciadv.adt1288 [paper, repository]

Associations between hormone therapy use and tau accumulation in brain regions vulnerable to Alzheimer's disease.

Journal: Science advances

Authors' code: Zenodo 14584971 (CC-BY-4.0)

Status: code verified, 2 files readable, 3 matches

Saturday, 1 March 2025 (1 paper)

[278] doi:10.1038/s41598-025-92022-8 [paper, repository]

[¹⁸F]FDG-PET and [¹⁸F]MPPF-PET are brain biomarkers for the creatine transporter Slc6a8 loss of function mutation.

Journal: Scientific reports

Authors' code: sourceforge.net/amide (no license)

Status: code verified

Friday, 28 February 2025 (1 paper)

[279] doi:10.1038/s41380-025-02938-w [paper, repository]

Investigating dopaminergic abnormalities in schizophrenia and first-episode psychosis with normative modelling and multisite molecular neuroimaging.

Journal: Molecular psychiatry

Authors' code: Zenodo 6364963 (other-open), alegiac95/imaging-transcriptomics (AGPL-3.0)

Status: code verified, 42 files readable

Friday, 21 February 2025 (2 papers)

[280] doi:10.3390/ijms26051845 [paper, repository]

Noninvasive Detection of Oxidative Stress in a Mouse Model of 4R Tauopathy via Positron Emission Tomography with [<sup>18</sup>F]ROStrace.

Journal: International journal of molecular sciences

Authors' code: Evangall/fiji-scripts (no license)

Status: empty repository, 1 file readable

[281] doi:10.1162/imag_a_00483 [paper, repository]

An open access resource for marmoset neuroscientific apparatus.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: marmosetbrainconnectome.org/apparatus (no license)

Status: code verified

Tuesday, 18 February 2025 (1 paper)

[282] doi:10.1007/s00259-025-07114-4 [paper, repository]

IRMA: Machine learning-based harmonization of 18 F-FDG PET brain scans in multi-center studies.

Journal: European journal of nuclear medicine and molecular imaging

Authors' code: SofieLovdal/IRMA-harmonization (MIT)

Status: code verified, 6 files readable, 4 matches

Monday, 17 February 2025 (1 paper)

[283] doi:10.1038/s41598-025-90115-y [paper]

Multimodal surface-based transformer model for early diagnosis of Alzheimer's disease.

Journal: Scientific reports

Status: code on request

Friday, 14 February 2025 (1 paper)

[284] doi:10.1038/s41598-025-86110-y [paper, repository]

Reducing inference cost of Alzheimer's disease identification using an uncertainty-aware ensemble of uni-modal and multi-modal learners.

Journal: Scientific reports

Authors' code: Msgun/uncertainty-based-multimodality (MIT)

Status: code verified, 6 files readable, 3 matches

Friday, 7 February 2025 (2 papers)

[285] doi:10.1007/s00259-025-07118-0 [paper, data]

A hybrid [<sup>18</sup>F]fluoropivalate PET-multiparametric MRI to detect and characterise brain tumour metastases based on a permissive environment for monocarboxylate transport.

Journal: European journal of nuclear medicine and molecular imaging

Status: data only, 1 dataset cited

[286] doi:10.3389/fnins.2025.1510878 [paper, repository]

Relationship between regional relative theta power and amyloid deposition in mild cognitive impairment: an exploratory study.

Journal: Frontiers in neuroscience

Authors' code: GGonEsc/petpve12 (GPL-3.0)

Status: code verified, 59 files readable, 5 matches

Wednesday, 5 February 2025 (1 paper)

[287] doi:10.1523/jneurosci.1408-24.2024 [paper, repository]

Precuneus Activity during Retrieval Is Positively Associated with Amyloid Burden in Cognitively Normal Older <i>APOE</i>4 Carriers.

Journal: The Journal of neuroscience : the official journal of the Society for Neuroscience

Authors' code: villeneuvelab/vlpp (MIT), fislarissa/precuneus_retrieval_hyperactivation (MIT)

Status: code verified, 41 files readable, 12 matches

Tuesday, 4 February 2025 (1 paper)

[288] doi:10.1017/s0033291724003362 [paper, repository]

Gray and white matter differences in the medial temporal lobe in late-life depression: a multimodal PET-MRI investigation.

Journal: Psychological medicine

Authors' code: treanus/KUL_NIS (MPL-2.0), mrtrix.org (no license), THOMVDC/PSYPET (no license)

Status: code verified, 139 files readable, 4 matches

Saturday, 1 February 2025 (1 paper)

[289] doi:10.1002/alz.14600 [paper, repository]

Machine learning prediction of tau-PET in Alzheimer's disease using plasma, MRI, and clinical data.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: DeMONLab-BioFINDER/karlsson-predict-taupet (no license)

Status: code verified, 6 files readable, 8 matches

Friday, 31 January 2025 (1 paper)

[290] doi:10.1038/s41386-025-02059-6 [paper, repository]

Childhood family environment and μ-opioid receptor availability in vivo in adulthood.

Journal: Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology

Authors' code: tkkarjal/magia (MIT)

Status: code verified, 172 files readable, 2 matches

Thursday, 30 January 2025 (2 papers)

[291] doi:10.1523/eneuro.0417-24.2024 [paper, repository]

Repetitive Grooming Behavior Following Aversive Stimulus Coincides with a Decrease in Anterior Hypothalamic Area Activity.

Journal: eNeuro

Authors' code: OSF u5btn (no license)

Status: code verified, 6 files readable

[292] doi:10.1162/imag_a_00464 [paper, data]

Putative mapping of α-subunits in the human brain: A PET study of GABA <sub>A</sub> receptor binding.

Journal: Imaging neuroscience (Cambridge, Mass.)

Status: code on request, 1 dataset cited

Tuesday, 28 January 2025 (1 paper)

[293] doi:10.1097/rlu.0000000000005685 [paper, repository]

Deep Learning-Powered CT-Less Multitracer Organ Segmentation From PET Images: A Solution for Unreliable CT Segmentation in PET/CT Imaging.

Journal: Clinical nuclear medicine

Authors' code: YazdanSalimi/Organ-Segmentation (MIT)

Status: code verified, 7 files readable, 3 matches

Monday, 27 January 2025 (1 paper)

[294] doi:10.1002/alz.14492 [paper, repository]

A multi-cohort study of longitudinal and cross-sectional Alzheimer's disease biomarkers in cognitively unimpaired older adults.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: pyushkevich/greedy (Apache-2.0), pyushkevich/cmrep (GPL-3.0)

Status: code verified, 256 files readable, 1 match

Tuesday, 21 January 2025 (1 paper)

[295] doi:10.1007/s11307-025-01983-9 [paper]

Autoradiography of Intracerebral Tumours in the Chick Embryo Model: A Feasibility Study Using Different PET Tracers.

Journal: Molecular imaging and biology

Status: code on request

Monday, 20 January 2025 (1 paper)

[296] doi:10.1093/braincomms/fcaf018 [paper, repository]

Amyloid-β deposition predicts oscillatory slowing of magnetoencephalography signals and a reduction of functional connectivity over time in cognitively unimpaired adults.

Journal: Brain communications

Authors' code: CornelisStam/BrainWave (no license)

Status: empty repository, 1 file readable

Friday, 10 January 2025 (2 papers)

[297] doi:10.1093/braincomms/fcaf009 [paper, repository]

Amyloid-β and tau deposition in traumatic brain injury: a study of Vietnam War veterans.

Journal: Brain communications

Authors' code: OssenKoppeLab/HdeBruin_ADNI_DOD (no license)

Status: code verified, 3 files readable

[298] doi:10.1093/braincomms/fcaf008 [paper, data]

Changes in neurotransmitter-related functional connectivity along the Alzheimer's disease continuum.

Journal: Brain communications

Status: data only, 1 dataset cited

Saturday, 4 January 2025 (1 paper)

[299] doi:10.1016/j.mtbio.2025.101455 [paper, data]

Doxorubicin-loaded PEGylated liposome modified with ANGPT2-specific peptide for integrative glioma-targeted imaging and therapy.

Journal: Materials today. Bio

Status: data only, 1 dataset cited

Wednesday, 1 January 2025 (3 papers)

[300] doi:10.1093/noajnl/vdaf100 [paper]

Radiomics based on MRI and <sup>18</sup>F-FDG PET/CT predicts response to EGFR-TKI therapy based on primary NSCLC and brain metastasis.

Journal: Neuro-oncology advances

Status: code on request

[301] doi:10.1159/000547113 [paper, repository]

Spatial Patterns of Cerebral Blood Flow in Alzheimer's Disease Identified by the Subtype and Stage Inference Algorithm.

Journal: Dementia and geriatric cognitive disorders extra

Authors' code: ucl-pond/pySuStaIn (MIT)

Status: code verified, 19 files readable

[302] doi:10.1177/25424823251409418 [paper, repository]

Higher cerebellum florbetapir uptake in cerebral amyloid angiopathy compared to Alzheimer's disease: A dual florbetapir and FDG PET study.

Journal: Journal of Alzheimer's disease reports

Authors' code: IHEP-Brain-Imaging/Spatial-Normalization-of-Brain-PET-Images (GPL-3.0)

Status: code verified, 28 files readable

Friday, 27 December 2024 (2 papers)

[303] doi:10.1186/s13550-024-01188-1 [paper, data]

Biodistribution and dosimetry of the PET radioligand [<sup>18</sup>F]CHDI-650 in mice for detection of mutant huntingtin aggregates.

Journal: EJNMMI research

Status: data only, 1 dataset cited

[304] doi:10.1117/1.jbo.29.12.126003 [paper]

Investigating ocular biomarkers and differential diagnosis of Alzheimer's disease and vascular cognitive impairment based on multimodal imaging.

Journal: Journal of biomedical optics

Status: code on request

Thursday, 26 December 2024 (1 paper)

[305] doi:10.1111/epi.18237 [paper, data]

A new perspective on drug-resistant epilepsy in children with focal cortical dysplasia type 1: From challenge to favorable outcome.

Journal: Epilepsia

Status: data only, 2 datasets cited

Wednesday, 25 December 2024 (1 paper)

[306] doi:10.1038/s42003-024-07404-x [paper, repository]

mFusion: a multiscale fusion method bridging neuroimages to genes through neurotransmissions in mental health disorders.

Journal: Communications biology

Authors' code: CaoLuolong/XomicsEnrich (no license), Zenodo 14374879 (CC-BY-4.0)

Status: code verified, 28 files readable, 8 matches

Tuesday, 24 December 2024 (1 paper)

[307] doi:10.1186/s40658-024-00707-2 [paper, repository]

EMATA: a toolbox for the automatic extraction and modeling of arterial inputs for tracer kinetic analysis in [¹⁸F]FDG brain studies.

Journal: EJNMMI physics

Authors' code: FairUnipd/EMATA (GPL-3.0)

Status: code verified, 96 files readable, 11 matches

Thursday, 19 December 2024 (1 paper)

[308] doi:10.1162/imag_a_00405 [paper]

Domain-specific cognitive impairment is differentially affected by Alzheimer disease tau pathologic burden and spread.

Journal: Imaging neuroscience (Cambridge, Mass.)

Status: code on request

Wednesday, 18 December 2024 (1 paper)

[309] doi:10.1016/j.ebiom.2024.105504 [paper]

Disentangling relationships between Alzheimer's disease plasma biomarkers and established biomarkers in patients of tertiary memory clinics.

Journal: EBioMedicine

Status: code on request

Friday, 6 December 2024 (1 paper)

[310] doi:10.1002/alz.14388 [paper, repository]

Childhood adversity and late-life cognitive and brain health in a diverse cohort.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: ehayeslarson/KSchildhoodadversity (no license)

Status: code verified, 9 files readable, 9 matches

Thursday, 5 December 2024 (1 paper)

[311] doi:10.1111/epi.18185 [paper, data]

Epilepsy surgery in children with operculoinsular epilepsy: Results of a large unicentric cohort.

Journal: Epilepsia

Status: data only, 2 datasets cited

Wednesday, 4 December 2024 (1 paper)

[312] doi:10.7554/elife.97184 [paper, repository]

Cortical beta oscillations map to shared brain networks modulated by dopamine.

Journal: eLife

Authors' code: netneurolab/hansen_receptors (CC-BY-NC-SA-4.0), meera-cm/ieeg_connectomics (MIT), leaddbs/leaddbs (GPL-3.0)

Status: code verified, 2,070 files readable, 8 matches

Tuesday, 3 December 2024 (1 paper)

[313] doi:10.1162/imag_a_00397 [paper]

Age- and sex-related differences in human α4β2* nicotinic acetylcholine receptor binding evaluated with [<sup>18</sup>F]nifene PET.

Journal: Imaging neuroscience (Cambridge, Mass.)

Status: code on request

Sunday, 1 December 2024 (2 papers)

[314] doi:10.1002/hbm.70083 [paper, repository]

Connectivity, Pathology, and ApoE4 Interactions Predict Longitudinal Tau Spatial Progression and Memory.

Journal: Human brain mapping

Authors' code: adni.loni.usc.edu (no license)

Status: code verified

[315] doi:10.3390/life14121580 [paper, repository]

Enhancing Amyloid PET Quantification: MRI-Guided Super-Resolution Using Latent Diffusion Models.

Journal: Life (Basel, Switzerland)

Authors' code: mathworks.com/help/images (no license), jaygshah/LDM-RR (Apache-2.0)

Status: code verified, 50 files readable, 10 matches

Thursday, 28 November 2024 (1 paper)

[316] doi:10.1038/s41598-024-80938-6 [paper, repository]

Enhancement and evaluation for deep learning-based classification of volumetric neuroimaging with 3D-to-2D knowledge distillation.

Journal: Scientific reports

Authors' code: LeaYoon/PPMI_3Dto2D_KD (no license)

Status: code verified, 29 files readable, 5 matches

Wednesday, 27 November 2024 (1 paper)

[317] doi:10.1007/s00259-024-06988-0 [paper, repository]

Incorporating label uncertainty during the training of convolutional neural networks improves performance for the discrimination between certain and inconclusive cases in dopamine transporter SPECT.

Journal: European journal of nuclear medicine and molecular imaging

Authors' code: lexej/cnn-datspect-classification (no license)

Status: code verified, 15 files readable, 2 matches

Monday, 25 November 2024 (2 papers)

[318] doi:10.1038/s41698-024-00760-1 [paper, repository]

Deep mutual learning on hybrid amino acid PET predicts H3K27M mutations in midline gliomas.

Journal: NPJ precision oncology

Authors' code: jacobgil/pytorch-grad-cam (MIT), MianxinLiu/MET-FET-AT-CNN (no license)

Status: code verified, 80 files readable, 11 matches

[319] doi:10.1162/imag_a_00367 [paper, repository]

Sensitivity of unconstrained quantitative magnetization transfer MRI to amyloid burden in preclinical Alzheimer's disease.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: JakobAsslaender/MRFingerprintingRecon.jl (MIT), andrewwmao/BiasReducedNetworks (MIT)

Status: code verified, 45 files readable, 3 matches

Tuesday, 12 November 2024 (1 paper)

[320] doi:10.1038/s41598-024-79259-5 [paper, repository]

Brain imaging and machine learning reveal uncoupled functional network for contextual threat memory in long sepsis.

Journal: Scientific reports

Authors' code: HuertaLab/20240730_beta_PET (Apache-2.0), Zenodo 13136023 (CC-BY-4.0)

Status: code verified, 41 files readable, 3 matches

Monday, 4 November 2024 (1 paper)

[321] doi:10.1186/s12974-024-03272-8 [paper, data]

Shifts in the spatiotemporal profile of inflammatory phenotypes of innate immune cells in the rat brain following acute intoxication with the organophosphate diisopropylfluorophosphate.

Journal: Journal of neuroinflammation

Status: data only, 4 datasets cited

Friday, 1 November 2024 (2 papers)

[322] doi:10.1093/brain/awae255 [paper, repository]

Plasma biomarkers in chronic single moderate-severe traumatic brain injury.

Journal: Brain : a journal of neurology

Authors' code: james-cole/brainageR (LGPL-3.0)

Status: code verified, 9 files readable

[323] doi:10.1038/s41598-024-76058-w [paper, data]

AVE0991 ameliorates dopaminergic neuronal damage in Parkinson's disease through HOTAIRM1/miR-223-3p/α-synuclein axis.

Journal: Scientific reports

Status: data only, 1 dataset cited

Tuesday, 29 October 2024 (1 paper)

[324] doi:10.1002/alz.14326 [paper, repository]

Latent change-on-change between amyloid accumulation and cognitive decline.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: klinger-hm/lcsm (no license)

Status: code verified, 8 files readable

Friday, 25 October 2024 (2 papers)

[325] doi:10.1126/sciadv.adn2776 [paper, repository]

Functional PET/MRI reveals active inhibition of neuronal activity during optogenetic activation of the nigrostriatal pathway.

Journal: Science advances

Authors' code: doi:10.5061/dryad.1vhhmgr2r (no license), Zenodo 11522241 (GPL-3.0)

Status: code verified

[326] doi:10.1162/imag_a_00328 [paper, repository]

PET imaging of the serotonin 1A receptor in major depressive disorder: Hierarchical multivariate analysis of [ <sup>11</sup> C]WAY100635 overcomes outcome measure discrepancies.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: mathesong/SiMBA_Materials (no license)

Status: code verified, 5 files readable, 1 match

Wednesday, 23 October 2024 (1 paper)

[327] doi:10.1002/alz.14334 [paper, repository]

Reductions in the white-gray functional connectome in preclinical Alzheimer's disease and their associations with amyloid and cognition.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: Gaogr/preAD_bipartite (no license)

Status: code verified, 4 files readable

Monday, 21 October 2024 (1 paper)

[328] doi:10.1016/j.ebiom.2024.105399 [paper, repository]

Relationship between MRI brain-age heterogeneity, cognition, genetics and Alzheimer's disease neuropathology.

Journal: EBioMedicine

Authors' code: ysu001/PUP (BSD-3-Clause)

Status: code verified, 277 files readable, 1 match

Saturday, 19 October 2024 (1 paper)

[329] doi:10.3390/jcm13206252 [paper, repository]

A New Tool for Extracting Static and Dynamic Parameters from [¹⁸F]F-DOPA PET/CT in Pediatric Gliomas.

Journal: Journal of clinical medicine

Authors' code: MicheleMureddu/Pediatric_fdopa_pipeline (Apache-2.0)

Status: code verified, 27 files readable, 8 matches

Friday, 18 October 2024 (1 paper)

[330] doi:10.1038/s41467-024-53148-x [paper, repository]

Multimodal gradients of basal forebrain connectivity across the neocortex.

Journal: Nature communications

Authors' code: sudesnac/HumanBF-Connectivity (no license), khanlab/subcorticalparc-smk (no license), Zenodo 7613835 (other-open), Zenodo 7622124 (other-open), Zenodo 13739128 (CC-BY-4.0)

Status: code verified, 433 files readable, 6 matches

Saturday, 12 October 2024 (1 paper)

[331] doi:10.1002/alz.14315 [paper, repository]

Head-to-head comparison of leading blood tests for Alzheimer's disease pathology.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: WashUFluidBiomarkers/HeadToHeadBloodTestStudy (MIT)

Status: code verified, 16 files readable, 10 matches

Thursday, 10 October 2024 (2 papers)

[332] doi:10.1186/s13024-024-00753-5 [paper, data]

Multi-analyte proteomic analysis identifies blood-based neuroinflammation, cerebrovascular and synaptic biomarkers in preclinical Alzheimer's disease.

Journal: Molecular neurodegeneration

Status: data only, 1 dataset cited

[333] doi:10.1038/s41387-024-00343-w [paper]

Impaired brain glucose metabolism in glucagon-like peptide-1 receptor knockout mice.

Journal: Nutrition & diabetes

Status: code on request

Monday, 7 October 2024 (2 papers)

[334] doi:10.1038/s41366-024-01644-x [paper, repository]

Perspectives on obesity imaging: [<sup>18</sup>F]2FNQ1P a specific 5-HT<sub>6</sub> brain PET radiotracer.

Journal: International journal of obesity (2005)

Authors' code: Zenodo 4700238 (CC-BY-4.0)

Status: empty repository

[335] doi:10.1093/braincomms/fcae354 [paper, repository]

Non-rapid eye movement sleep slow-wave activity features are associated with amyloid accumulation in older adults with obstructive sleep apnoea.

Journal: Brain communications

Authors' code: bnelair/best-toolbox (BSD-3-Clause)

Status: code verified, 86 files readable, 9 matches

Saturday, 5 October 2024 (1 paper)

[336] doi:10.1016/j.nsa.2024.104094 [paper]

Neurovascular coupling of striatal dopamine D<sub>2/3</sub> receptor availability and perfusion using simultaneous PET/MR in humans.

Journal: Neuroscience applied

Status: code on request

Tuesday, 1 October 2024 (2 papers)

[337] doi:10.1002/hbm.70000 [paper, repository]

Structural and functional brain alterations in laryngeal dystonia: A coordinate-based activation likelihood estimation meta-analysis.

Journal: Human brain mapping

Authors' code: simonyanlab.meei.harvard.edu/resources (no license)

Status: dead link

[338] doi:10.1038/s41467-024-52265-x [paper, data]

Cryo-EM structure of Alzheimer's disease tau filaments with PET ligand MK-6240.

Journal: Nature communications

Status: data only, 1 dataset cited

Monday, 30 September 2024 (1 paper)

[339] doi:10.3389/fmed.2024.1415058 [paper, repository]

Whole-body PET image denoising for reduced acquisition time.

Journal: Frontiers in medicine

Authors' code: junyanz/pytorch-CycleGAN-and-pix2pix (BSD-3-Clause)

Status: code verified, 55 files readable, 9 matches

Friday, 20 September 2024 (2 papers)

[340] doi:10.1038/s41398-024-03091-8 [paper]

Neural correlates of harm avoidance: a multimodal meta-analysis of brain structural and resting-state functional neuroimaging studies.

Journal: Translational psychiatry

Status: code on request

[341] doi:10.1038/s41467-024-52298-2 [paper, data]

CYP1B1-RMDN2 Alzheimer's disease endophenotype locus identified for cerebral tau PET.

Journal: Nature communications

Status: data only, 2 datasets cited

Thursday, 19 September 2024 (1 paper)

[342] doi:10.1038/s42003-024-06836-9 [paper, repository]

A shared spatial topography links the functional connectome correlates of cocaine use disorder and dopamine D<sub>2/3</sub> receptor densities.

Journal: Communications biology

Authors' code: ricardjocelyn/cocaine-use-disorder-receptor-density (no license)

Status: code verified, 5 files readable, 1 match

Wednesday, 18 September 2024 (1 paper)

[343] doi:10.1038/s41593-024-01763-8 [paper, repository]

Synergistic association of Aβ and tau pathology with cortical neurophysiology and cognitive decline in asymptomatic older adults.

Journal: Nature neuroscience

Authors' code: villeneuvelab/vlpp (MIT), jogaru1818/AD_proteinopathy_neurophysiology (no license)

Status: code verified, 44 files readable, 12 matches

Monday, 16 September 2024 (1 paper)

[344] doi:10.3389/fnagi.2024.1430408 [paper, repository]

Subthreshold amyloid deposition, cerebral small vessel disease, and functional brain network disruption in delayed cognitive decline after stroke.

Journal: Frontiers in aging neuroscience

Authors' code: cocoanlab/cocoancore (GPL-3.0)

Status: code verified, 127 files readable, 2 matches

Friday, 13 September 2024 (1 paper)

[345] doi:10.1126/sciadv.adp2840 [paper, repository]

Positronium image of the human brain in vivo.

Journal: Science advances

Authors' code: JPETTomography/Gate (LGPL-3.0)

Status: code verified, 844 files readable, 1 match

Monday, 9 September 2024 (1 paper)

[346] doi:10.1371/journal.pone.0309885 [paper, data]

Utility of neuromelanin-sensitive MRI in the diagnosis of dementia with Lewy bodies.

Journal: PloS one

Status: data only, 1 dataset cited

Saturday, 7 September 2024 (1 paper)

[347] doi:10.1007/s11682-024-00913-7 [paper]

Multimodal nonlinear correlates of behavioural symptoms in frontotemporal dementia.

Journal: Brain imaging and behavior

Status: code on request

Thursday, 5 September 2024 (1 paper)

[348] doi:10.1038/s41398-024-03061-0 [paper, data]

Medial prefrontal neuroplasticity during extended-release naltrexone treatment of opioid use disorder - a longitudinal structural magnetic resonance imaging study.

Journal: Translational psychiatry

Status: data only, 3 datasets cited

Tuesday, 3 September 2024 (1 paper)

[349] doi:10.2967/jnumed.123.267277 [paper, repository]

StepBrain: A 3-Dimensionally Printed Multicompartmental Anthropomorphic Brain Phantom to Simulate PET Activity Distributions.

Journal: Journal of nuclear medicine : official publication, Society of Nuclear Medicine

Authors' code: swederik/pvelab (other)

Status: code verified, 252 files readable

Sunday, 1 September 2024 (2 papers)

[350] doi:10.1093/cercor/bhae357 [paper, repository]

Age differences in BOLD modulation to task difficulty as a function of amyloid burden.

Journal: Cerebral cortex (New York, N.Y. : 1991)

Authors' code: OSF 7rsm3 (no license), neurovault.org/collections/zwmwdjjv (no license)

Status: code verified, 1 file readable, 2 matches

[351] doi:10.1111/cns.14905 [paper, data]

Delineating structural and metabolic abnormalities in amygdala and hippocampal subfields for different seizure-onset patterns via stereotactic electroencephalography.

Journal: CNS neuroscience & therapeutics

Status: data only, 1 dataset cited

Friday, 30 August 2024 (1 paper)

[352] doi:10.3389/fnhum.2024.1406786 [paper, repository]

Next move in movement disorders: neuroimaging protocols for hyperkinetic movement disorders.

Journal: Frontiers in human neuroscience

Authors' code: jrdalenberg/PETBrainPreprocessing (Apache-2.0), neuropower/neuropower-core (MIT)

Status: code verified, 23 files readable, 5 matches

Wednesday, 28 August 2024 (1 paper)

[353] doi:10.1038/s41467-024-50505-8 [paper, repository]

Distinct roles of monkey OFC-subcortical pathways in adaptive behavior.

Journal: Nature communications

Authors' code: minamimoto-lab/2023-Oyama-OFC (no license)

Status: code verified, 3 files readable

Saturday, 24 August 2024 (1 paper)

[354] doi:10.1016/j.nicl.2024.103660 [paper, repository]

Multimodal analysis of disease onset in Alzheimer's disease using Connectome, Molecular, and genetics data.

Journal: NeuroImage. Clinical

Authors' code: MICA-MNI/BrainSpace (BSD-3-Clause)

Status: code verified, 129 files readable, 2 matches

Friday, 23 August 2024 (2 papers)

[355] doi:10.1038/s41598-024-70414-6 [paper, data]

Effects of a 5-HT₄ receptor antagonist in the caudate nucleus on the performance of macaques in a delayed reward task.

Journal: Scientific reports

Status: data only, 1 dataset cited

[356] doi:10.1016/j.nicl.2024.103657 [paper, repository]

Diverging functional connectivity timescales: Capturing distinct aspects of cognitive performance in early psychosis.

Journal: NeuroImage. Clinical

Authors' code: yetianmed/subcortex (MIT)

Status: code verified, 46 files readable, 2 matches

Wednesday, 14 August 2024 (1 paper)

[357] doi:10.1002/alz.14095 [paper, data]

Omics-derived biological modules reflect metabolic brain changes in Alzheimer's disease.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Status: code on request, 1 dataset cited

Monday, 5 August 2024 (1 paper)

[358] doi:10.1038/s41551-024-01242-2 [paper, repository]

Contributions of network structure, chemoarchitecture and diagnostic categories to transitions between cognitive topographies.

Journal: Nature biomedical engineering

Authors' code: neurosynth/neurosynth (MIT), dominance-analysis/dominance-analysis (MIT), gushiapi/Dynamic-Trajectory (no license), brainnetworkslab.com/coderesources (no license), frantisekvasa/rotate_parcellation (MIT), rlambiot/variance (no license), dsi-studio.labsolver.org (no license), netneurolab/luppi-neurosynth-control (BSD-3-Clause)

Status: code verified, 71 files readable, 11 matches

Thursday, 1 August 2024 (4 papers)

[359] doi:10.14336/ad.2023.0707 [paper, repository]

Alzheimer Disease Pathology and Neurodegeneration in Midlife Obesity: A Pilot Study.

Journal: Aging and disease

Authors' code: ysu001/PUP (BSD-3-Clause)

Status: code verified, 277 files readable, 1 match

[360] doi:10.1093/brain/awae176 [paper, repository]

Towards cascading genetic risk in Alzheimer's disease.

Journal: Brain : a journal of neurology

Authors' code: andrealtmann/cascading_genetic_risk (GPL-3.0)

Status: code verified, 8 files readable, 2 matches

[361] doi:10.1002/hbm.26795 [paper, repository]

Compressed representation of brain genetic transcription.

Journal: Human brain mapping

Authors' code: jamesruffle/compressed-transcriptomics (Apache-2.0)

Status: code verified, 3 files readable, 1 match

[362] doi:10.1007/s00415-024-12591-y [paper, data]

Explaining recovery from coma with multimodal neuroimaging.

Journal: Journal of neurology

Status: data only, 2 datasets cited

Wednesday, 24 July 2024 (1 paper)

[363] doi:10.3390/diagnostics14151590 [paper, repository]

Automated Quantitative Image-Derived Input Function for the Estimation of Cerebral Blood Flow Using Oxygen-15-Labelled Water on a Long-Axial Field-of-View PET/CT Scanner.

Journal: Diagnostics (Basel, Switzerland)

Authors' code: Rigshospitalet-KFNM/IDIF (MIT)

Status: code verified, 4 files readable, 1 match

Tuesday, 23 July 2024 (2 papers)

[364] doi:10.1002/alz.14132 [paper, repository]

Predicting continuous amyloid PET values with CSF tau phosphorylation occupancies.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: ysu001/PUP (BSD-3-Clause)

Status: code verified, 277 files readable

[365] doi:10.1002/alz.13908 [paper, repository]

Harmonizing tau positron emission tomography in Alzheimer's disease: The CenTauR scale and the joint propagation model.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: larslau/JPM (GPL-3.0)

Status: code verified, 4 files readable

Sunday, 21 July 2024 (1 paper)

[366] doi:10.1111/ene.16364 [paper]

Association between striatal amyloid deposition and motor prognosis in Parkinson's disease.

Journal: European journal of neurology

Status: code on request

Friday, 12 July 2024 (2 papers)

[367] doi:10.1002/alz.14110 [paper, repository]

Neurochemical organization of cortical proteinopathy and neurophysiology along the Alzheimer's disease continuum.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: villeneuvelab/vlpp (MIT), netneurolab/neuromaps (CC-BY-NC-SA-4.0)

Status: code verified, 87 files readable, 1 match

[368] doi:10.3390/ijms25147649 [paper, repository]

A Comparative Analysis of Two Automated Quantification Methods for Regional Cerebral Amyloid Retention: PET-Only and PET-and-MRI-Based Methods.

Journal: International journal of molecular sciences

Authors' code: yandexdataschool/roc_comparison (MIT)

Status: code verified, 5 files readable, 1 match

Tuesday, 9 July 2024 (1 paper)

[369] doi:10.1093/braincomms/fcae222 [paper, repository]

Different patterns of structural network impairments in two amyotrophic lateral sclerosis subtypes driven by ¹⁸F-fluorodeoxyglucose positron emission tomography/magnetic resonance hybrid imaging.

Journal: Brain communications

Authors' code: FelixFengCN/ALS-subtype (no license)

Status: code verified, 3 files readable

Friday, 5 July 2024 (1 paper)

[370] doi:10.1371/journal.pone.0298110 [paper, repository]

Lateral frontoparietal effective connectivity differentiates and predicts state of consciousness in a cohort of patients with traumatic disorders of consciousness.

Journal: PloS one

Authors' code: RikuIhalainen/DCM-of-DoC (no license)

Status: code verified, 3 files readable, 3 matches

Thursday, 4 July 2024 (1 paper)

[371] doi:10.1002/alz.13883 [paper, repository]

Stress testing the Centiloid: Precision and variability of PET quantification of amyloid pathology.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: MahnazShekari/Centiloid-pipeline (no license)

Status: code verified, 2 files readable

Monday, 1 July 2024 (2 papers)

[372] doi:10.1002/hbm.26776 [paper, repository]

Dynamic properties in functional connectivity changes and striatal dopamine deficiency in Parkinson's disease.

Journal: Human brain mapping

Authors' code: asendorfa/handling-gift (no license)

Status: code verified, 3 files readable, 1 match

[373] doi:10.1093/radadv/umae019 [paper, repository]

Deep learning-based amyloid PET harmonization to predict cognitive decline in non-demented elderly.

Journal: Radiology advances

Authors' code: yoonchoi-neuro/amylPET_DL-ADprob (no license)

Status: code verified, 1 file readable

Thursday, 20 June 2024 (1 paper)

[374] doi:10.1038/s41598-024-62820-7 [paper]

In vivo brain estrogen receptor density by neuroendocrine aging and relationships with cognition and symptomatology.

Journal: Scientific reports

Status: code on request

Monday, 17 June 2024 (1 paper)

[375] doi:10.1007/s00259-024-06796-6 [paper, repository]

Connectivity based on glucose dynamics reveals exaggerated sensorimotor network coupling on subject-level in Parkinson's disease.

Journal: European journal of nuclear medicine and molecular imaging

Authors' code: ruppertm/RSfPET-fMRI (no license)

Status: code verified, 5 files readable, 5 matches

Thursday, 13 June 2024 (1 paper)

[376] doi:10.1038/s43856-024-00547-2 [paper]

Real-time motion-enabling positron emission tomography of the brain of upright ambulatory humans.

Journal: Communications medicine

Status: code on request

Wednesday, 12 June 2024 (2 papers)

[377] doi:10.1159/000539800 [paper, repository]

Classification of Mild Cognitive Impairment and Alzheimer's Disease Using Manual Motor Measures.

Journal: Neuro-degenerative diseases

Authors' code: mtorchiano/lmPerm (no license)

Status: code verified, 14 files readable

[378] doi:10.1038/s41467-024-49300-2 [paper, repository]

Tau follows principal axes of functional and structural brain organization in Alzheimer's disease.

Journal: Nature communications

Authors' code: AICONSlab/AD_connectome_gradients (BSD-3-Clause)

Status: code verified, 6 files readable, 3 matches

Tuesday, 11 June 2024 (1 paper)

[379] doi:10.1212/wnl.0000000000209419 [paper, repository]

Continuous β-Amyloid CSF/PET Imbalance Model to Capture Alzheimer Disease Heterogeneity.

Journal: Neurology

Authors' code: amypad.eu/resources/software (no license)

Status: code verified

Monday, 10 June 2024 (1 paper)

[380] doi:10.1162/imag_a_00190 [paper]

The relationship between SV2A levels, neural activity, and cognitive function in healthy humans: A [11C]UCB-J PET and fMRI study.

Journal: Imaging neuroscience (Cambridge, Mass.)

Status: code on request

Thursday, 6 June 2024 (1 paper)

[381] doi:10.1038/s41467-024-48462-3 [paper]

Tau propagation in the brain olfactory circuits is associated with smell perception changes in aging.

Journal: Nature communications

Status: code on request

Friday, 31 May 2024 (1 paper)

[382] doi:10.1016/j.isci.2024.110159 [paper]

Toward AI-driven neuroepigenetic imaging biomarker for alcohol use disorder: A proof-of-concept study.

Journal: iScience

Status: code on request

Monday, 27 May 2024 (1 paper)

[383] doi:10.1186/s13148-024-01678-y [paper]

No association between peripheral serotonin-gene-related DNA methylation and brain serotonin neurotransmission in the healthy and depressed state.

Journal: Clinical epigenetics

Status: code on request

Saturday, 25 May 2024 (1 paper)

[384] doi:10.1186/s12868-024-00871-2 [paper, repository]

Automated glioblastoma patient classification using hypoxia levels measured through magnetic resonance images.

Journal: BMC neuroscience

Authors' code: Jfortin1/ComBatHarmonization (no license)

Status: code verified, 17 files readable

Friday, 17 May 2024 (1 paper)

[385] doi:10.1007/s00259-024-06759-x [paper, repository]

Assessment of cerebral drug occupancy in humans using a single PET-scan: A [<sup>11</sup>C]UCB-J PET study.

Journal: European journal of nuclear medicine and molecular imaging

Authors' code: Gjertrud/ISI (no license)

Status: code verified, 4 files readable, 2 matches

Thursday, 16 May 2024 (1 paper)

[386] doi:10.1371/journal.pone.0301118 [paper, data]

Evaluation of microglia activation related markers following a clinical course of TBS: A non-human primate study.

Journal: PloS one

Status: data only, 1 dataset cited

Tuesday, 7 May 2024 (1 paper)

[387] doi:10.1093/braincomms/fcae161 [paper, data]

Targeting thalamocortical circuits for closed-loop stimulation in Lennox-Gastaut syndrome.

Journal: Brain communications

Status: data only, 1 dataset cited

Saturday, 4 May 2024 (1 paper)

[388] doi:10.1038/s42003-024-06217-2 [paper, repository]

Personalized whole-brain neural mass models reveal combined Aβ and tau hyperexcitable influences in Alzheimer's disease.

Journal: Communications biology

Authors' code: neuropm-lab.com/publication-codes.html (no license), Zenodo 10909566 (CC-BY-4.0)

Status: code verified, 3 files readable, 1 match

Wednesday, 1 May 2024 (2 papers)

[389] doi:10.1093/brain/awad420 [paper, repository]

Basal forebrain integrity, cholinergic innervation and cognition in idiopathic Parkinson's disease.

Journal: Brain : a journal of neurology

Authors' code: neuro-stivenr/fernet-freewater (GPL-3.0)

Status: code verified, 8 files readable, 3 matches

[390] doi:10.3390/ijms25094943 [paper, repository]

Positron Emission Tomography with [<sup>18</sup>F]ROStrace Reveals Progressive Elevations in Oxidative Stress in a Mouse Model of Alpha-Synucleinopathy.

Journal: International journal of molecular sciences

Authors' code: Evangall/fiji-scripts (no license)

Status: empty repository, 1 file readable

Tuesday, 30 April 2024 (1 paper)

[391] doi:10.1038/s41598-024-60707-1 [paper, repository]

Genetic-based patient stratification in Alzheimer's disease.

Journal: Scientific reports

Authors' code: laurahdezlorenzo/AD_genetics_stratification (MIT)

Status: code verified, 12 files readable, 8 matches

Monday, 29 April 2024 (1 paper)

[392] doi:10.3390/ijms25094837 [paper]

Early Blood-Brain Barrier Impairment as a Pathological Hallmark in a Novel Model of Closed-Head Concussive Brain Injury (CBI) in Mice.

Journal: International journal of molecular sciences

Status: code on request

Friday, 26 April 2024 (1 paper)

[393] doi:10.1007/s11357-024-01148-6 [paper, repository]

Multimodal brain age prediction using machine learning: combining structural MRI and 5-HT2AR PET-derived features.

Journal: GeroScience

Authors' code: RDoerfel/bap2a-public (MIT)

Status: code verified, 56 files readable, 4 matches

Thursday, 18 April 2024 (2 papers)

[394] doi:10.1038/s41467-024-47322-4 [paper, data]

Structural basis for antiepileptic drugs and botulinum neurotoxin recognition of SV2A.

Journal: Nature communications

Status: data only, 1 dataset cited

[395] doi:10.1162/imag_a_00135 [paper]

Evaluating the effect of extra-cerebral off-target binding in [F-18]MK6240 PET scans in early-stage Alzheimer's disease.

Journal: Imaging neuroscience (Cambridge, Mass.)

Status: code on request

Wednesday, 17 April 2024 (1 paper)

[396] doi:10.1186/s13550-024-01095-5 [paper]

Short post-injection seizure duration is associated with reduced power of ictal brain perfusion SPECT to lateralize the seizure onset zone.

Journal: EJNMMI research

Status: code on request

Saturday, 13 April 2024 (1 paper)

[397] doi:10.1038/s41386-024-01859-6 [paper]

In vivo translocator protein in females with autism spectrum disorder: a pilot study.

Journal: Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology

Status: code on request

Wednesday, 10 April 2024 (1 paper)

[398] doi:10.1098/rsos.231762 [paper, repository]

Advancing multimodal medical image fusion: an adaptive image decomposition approach based on multilevel Guided filtering.

Journal: Royal Society open science

Authors' code: S-M-Cloud/Advancing-multimodal-medical-image-fusion (no license)

Status: code verified, 5 files readable

Friday, 5 April 2024 (1 paper)

[399] doi:10.1162/imag_a_00126 [paper]

Testing PET-[ <sup>11</sup> C]ABP688 as a tool to quantify glutamate release <i>in vivo</i>.

Journal: Imaging neuroscience (Cambridge, Mass.)

Status: code on request

Monday, 1 April 2024 (1 paper)

[400] doi:10.1093/brain/awad356 [paper]

Uncovering the distinct macro-scale anatomy of dysexecutive and behavioural degenerative diseases.

Journal: Brain : a journal of neurology

Status: code on request

Tuesday, 19 March 2024 (1 paper)

[401] doi:10.1002/alz.13789 [paper, data]

Glymphatic system dysfunction predicts amyloid deposition, neurodegeneration, and clinical progression in Alzheimer's disease.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Status: data only, 1 dataset cited

Thursday, 14 March 2024 (1 paper)

[402] doi:10.1038/s41398-024-02837-8 [paper, repository]

Preliminary evidence for preserved synaptic density in late-life depression.

Journal: Translational psychiatry

Authors' code: THOMVDC/PSYPET (no license)

Status: code verified, 80 files readable, 4 matches

Sunday, 3 March 2024 (1 paper)

[403] doi:10.1038/s41598-024-56001-9 [paper, repository]

Automated detection of Alzheimer's disease: a multi-modal approach with 3D MRI and amyloid PET.

Journal: Scientific reports

Authors' code: montanarograziano/Multimodal-approach-for-AD (MIT)

Status: code verified, 47 files readable, 9 matches

Friday, 1 March 2024 (1 paper)

[404] doi:10.1093/brain/awad346 [paper, repository]

Synthesizing images of tau pathology from cross-modal neuroimaging using deep learning.

Journal: Brain : a journal of neurology

Authors' code: Neurology-AI-Program/AI_imputed_tau_PET (no license)

Status: code verified, 3 files readable, 1 match

Sunday, 25 February 2024 (1 paper)

[405] doi:10.1038/s41598-024-55092-8 [paper, repository]

Radiomics for residual tumour detection and prognosis in newly diagnosed glioblastoma based on postoperative [¹¹C] methionine PET and T1c-w MRI.

Journal: Scientific reports

Authors' code: oncoray/cnn-petra (no license), alexzwanenburg/familiar (EUPL-1.2)

Status: code verified, 277 files readable, 13 matches

Wednesday, 21 February 2024 (1 paper)

[406] doi:10.1002/alz.13729 [paper, repository]

Presenilin-1 mutation position influences amyloidosis, small vessel disease, and dementia with disease stage.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: psmd-marker.com (no license)

Status: code verified

Friday, 9 February 2024 (1 paper)

[407] doi:10.1038/s41467-024-45627-y [paper, repository]

Amyloid-β aggregates activate peripheral monocytes in mild cognitive impairment.

Journal: Nature communications

Authors' code: VingesLDB/2023_NCOMM (MIT)

Status: empty repository, 2 files readable

Wednesday, 7 February 2024 (3 papers)

[408] doi:10.1038/s41386-024-01803-8 [paper, data]

Brain connectivity changes to fast versus slow dopamine increases.

Journal: Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology

Status: data only, 1 dataset cited

[409] doi:10.3389/fncom.2024.1328699 [paper, data]

Random forest analysis of midbrain hypometabolism using [¹⁸F]-FDG PET identifies Parkinson's disease at the subject-level.

Journal: Frontiers in computational neuroscience

Status: data only, 1 dataset cited

[410] doi:10.1093/braincomms/fcae031 [paper, repository]

Tau accumulation and its spatial progression across the Alzheimer's disease spectrum.

Journal: Brain communications

Authors' code: sihnpy.readthedocs.io (no license), villeneuvelab/projects (MIT)

Status: code verified, 43 files readable, 7 matches

Tuesday, 30 January 2024 (1 paper)

[411] doi:10.3389/fnagi.2024.1273738 [paper, data]

Oscillatory characteristics of resting-state magnetoencephalography reflect pathological and symptomatic conditions of cognitive impairment.

Journal: Frontiers in aging neuroscience

Status: data only, 1 dataset cited

Wednesday, 24 January 2024 (1 paper)

[412] doi:10.3389/fnins.2023.1336026 [paper, data]

Levetiracetam modulates brain metabolic networks and transcriptomic signatures in the 5XFAD mouse model of Alzheimer's disease.

Journal: Frontiers in neuroscience

Status: data only, 1 dataset cited

Wednesday, 3 January 2024 (1 paper)

[413] doi:10.1038/s41467-023-44374-w [paper, repository]

Elevated CSF GAP-43 is associated with accelerated tau accumulation and spread in Alzheimer's disease.

Journal: Nature communications

Authors' code: nfranzme/published (no license)

Status: code verified, 2 files readable

Tuesday, 2 January 2024 (1 paper)

[414] doi:10.2967/jnumed.123.265931 [paper, repository]

MRI or ¹⁸F-FDG PET for Brain Age Gap Estimation: Links to Cognition, Pathology, and Alzheimer Disease Progression.

Journal: Journal of nuclear medicine : official publication, Society of Nuclear Medicine

Authors' code: juaml.github.io/julearn (no license)

Status: code verified

Monday, 1 January 2024 (1 paper)

[415] doi:10.1371/journal.pbio.3002445 [paper, data]

Reduced serotonergic transmission alters sensitivity to cost and reward via 5-HT1A and 5-HT1B receptors in monkeys.

Journal: PLoS biology

Status: data only, 1 dataset cited

Friday, 22 December 2023 (1 paper)

[416] doi:10.1007/s00259-023-06566-w [paper, repository]

Automated identification of uncertain cases in deep learning-based classification of dopamine transporter SPECT to improve clinical utility and acceptance.

Journal: European journal of nuclear medicine and molecular imaging

Authors' code: ThomasBudd/dat_spect_ud (MIT)

Status: code verified, 10 files readable

Tuesday, 19 December 2023 (1 paper)

[417] doi:10.1186/s13024-023-00688-3 [paper, repository]

Advanced structural brain aging in preclinical autosomal dominant Alzheimer disease.

Journal: Molecular neurodegeneration

Authors' code: peterrmillar/DIANBrainAge (no license)

Status: code verified, 1 file readable, 1 match

Monday, 18 December 2023 (2 papers)

[418] doi:10.1073/pnas.2314596120 [paper, data]

Examining the role of dopamine in methylphenidate's effects on resting brain function.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Status: data only, 1 dataset cited

[419] doi:10.30773/pi.2023.0052 [paper, repository]

A Case-Control Clinical Trial on a Deep Learning-Based Classification System for Diagnosis of Amyloid-Positive Alzheimer's Disease.

Journal: Psychiatry investigation

Authors' code: cadene/pretrained-models.pytorch (BSD-3-Clause)

Status: code verified, 37 files readable

Friday, 15 December 2023 (1 paper)

[420] doi:10.1016/j.nicl.2023.103551 [paper, repository]

Predicting cognitive decline: Which is more useful, baseline amyloid levels or longitudinal change?

Journal: NeuroImage. Clinical

Authors' code: ysu001/PUP (BSD-3-Clause)

Status: code verified, 277 files readable, 1 match

Wednesday, 13 December 2023 (1 paper)

[421] doi:10.1371/journal.pdig.0000191 [paper, repository]

Classification of hyper-scale multimodal imaging datasets.

Journal: PLOS digital health

Authors' code: cdmacfadyen/classify-modality (MIT)

Status: code verified, 28 files readable, 5 matches

Friday, 8 December 2023 (1 paper)

[422] doi:10.1186/s41747-023-00390-5 [paper]

Improved postprocessing of dynamic glucose-enhanced CEST MRI for imaging brain metastases at 3 T.

Journal: European radiology experimental

Status: code on request

Tuesday, 5 December 2023 (2 papers)

[423] doi:10.1007/s00259-023-06530-8 [paper]

Florbetapir PET-assessed demyelination is associated with faster tau accumulation in an APOE ε4-dependent manner.

Journal: European journal of nuclear medicine and molecular imaging

Status: code on request

[424] doi:10.1155/2023/3819587 [paper, repository]

Segmentation of Dynamic Total-Body [¹⁸F]-FDG PET Images Using Unsupervised Clustering.

Journal: International journal of biomedical imaging

Authors' code: rklen/Dynamic_FDG_PET_clustering (GPL-3.0)

Status: code verified, 4 files readable, 2 matches

Friday, 1 December 2023 (1 paper)

[425] doi:10.1093/brain/awad232 [paper, repository]

A data-driven study of Alzheimer's disease related amyloid and tau pathology progression.

Journal: Brain : a journal of neurology

Authors' code: ucl-pond/pySuStaIn (MIT)

Status: code verified, 19 files readable

Thursday, 30 November 2023 (2 papers)

[426] doi:10.1002/alz.13538 [paper, repository]

Brain metabolic network covariance and aging in a mouse model of Alzheimer's disease.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: echumin/CovNet (no license)

Status: code verified, 218 files readable, 10 matches

[427] doi:10.3390/cells12232738 [paper, repository]

Human Embryonic Stem Cell-Derived Immature Midbrain Dopaminergic Neurons Transplanted in Parkinsonian Monkeys.

Journal: Cells

Authors' code: im-patch.com (no license)

Status: code found, still to be checked

Thursday, 23 November 2023 (1 paper)

[428] doi:10.1038/s41684-023-01289-9 [paper, repository]

The PREMISE database of 20 Macaca fascicularis PET/MRI brain images available for research.

Journal: Lab animal

Authors' code: gitlab.in2p3.fr/cermep/cermep-bids-retro (MIT)

Status: code verified, 12 files readable, 7 matches

Wednesday, 15 November 2023 (1 paper)

[429] doi:10.1186/s13195-023-01345-z [paper, data]

Neuronal transcriptome, tau and synapse loss in Alzheimer's knock-in mice require prion protein.

Journal: Alzheimer's research & therapy

Status: data only, 1 dataset cited

Saturday, 11 November 2023 (1 paper)

[430] doi:10.3390/ijms242216208 [paper, repository]

Comparison between [⁶⁸Ga]Ga-PSMA-617 and [¹⁸F]FET PET as Imaging Biomarkers in Adult Recurrent Glioblastoma.

Journal: International journal of molecular sciences

Authors' code: cbri92/Genesis-GBM-001 (MIT), Zenodo 8124207 (other-open)

Status: code verified, 37 files readable, 10 matches

Friday, 20 October 2023 (2 papers)

[431] doi:10.1186/s40658-023-00584-1 [paper]

Optimization of Q.Clear reconstruction for dynamic <sup>18</sup>F PET imaging.

Journal: EJNMMI physics

Status: code on request

[432] doi:10.1038/s41467-023-42203-8 [paper, data]

American crows that excel at tool use activate neural circuits distinct from less talented individuals.

Journal: Nature communications

Status: data only, 1 dataset cited

Wednesday, 18 October 2023 (1 paper)

[433] doi:10.3389/fnagi.2023.1225816 [paper]

Bayesian workflow for the investigation of hierarchical classification models from tau-PET and structural MRI data across the Alzheimer's disease spectrum.

Journal: Frontiers in aging neuroscience

Status: code on request

Saturday, 14 October 2023 (1 paper)

[434] doi:10.1016/j.ebiom.2023.104835 [paper, repository]

Uncovering distinct progression patterns of tau deposition in progressive supranuclear palsy using [¹⁸F]Florzolotau PET imaging and subtype/stage inference algorithm.

Journal: EBioMedicine

Authors' code: ucl-pond/pySuStaIn (MIT)

Status: code verified, 19 files readable, 2 matches

Monday, 9 October 2023 (1 paper)

[435] doi:10.1038/s41380-023-02285-8 [paper]

Effects of escitalopram on synaptic density in the healthy human brain: a randomized controlled trial.

Journal: Molecular psychiatry

Status: code on request

Wednesday, 4 October 2023 (1 paper)

[436] doi:10.3390/diagnostics13193121 [paper, repository]

Functional FDG-PET: Measurement of Task Related Neural Activity in Humans-A Compartment Model Approach and Comparison to fMRI.

Journal: Diagnostics (Basel, Switzerland)

Authors' code: fil.ion.ucl.ac.uk/spm/software (no license)

Status: code verified

Saturday, 30 September 2023 (2 papers)

[437] doi:10.1038/s41467-023-41897-0 [paper, repository]

PET-measured human dopamine synthesis capacity and receptor availability predict trading rewards and time-costs during foraging.

Journal: Nature communications

Authors' code: angmirian/Foraging_Dopamine_2023 (no license), Zenodo 8283106 (other-open)

Status: code verified, 8 files readable, 7 matches

[438] doi:10.1038/s41598-023-43690-x [paper, data]

Genetic contributions to brain serotonin transporter levels in healthy adults.

Journal: Scientific reports

Status: code on request, 9 datasets cited

Friday, 29 September 2023 (1 paper)

[439] doi:10.1177/0271678x231204769 [paper]

Similarity between structural and proxy estimates of brain connectivity.

Journal: Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism

Status: code on request

Thursday, 28 September 2023 (1 paper)

[440] doi:10.3389/fphar.2023.1140656 [paper, repository]

A pilot study of cerebral metabolism and serotonin 5-HT_2A receptor occupancy in rats treated with the psychedelic tryptamine DMT in conjunction with the MAO inhibitor harmine.

Journal: Frontiers in pharmacology

Authors' code: OSF dn8fy (no license)

Status: code verified, 11 files readable, 1 match

Friday, 22 September 2023 (1 paper)

[441] doi:10.1186/s13195-023-01302-w [paper, data]

Head-to-head comparison between plasma p-tau217 and flortaucipir-PET in amyloid-positive patients with cognitive impairment.

Journal: Alzheimer's research & therapy

Status: data only, 1 dataset cited

Tuesday, 12 September 2023 (1 paper)

[442] doi:10.1111/obr.13620 [paper, data]

Effects of bariatric surgery and dietary interventions for obesity on brain neurotransmitter systems and metabolism: A systematic review of positron emission tomography (PET) and single-photon emission computed tomography (SPECT) studies.

Journal: Obesity reviews : an official journal of the International Association for the Study of Obesity

Status: data only, 2 datasets cited

Monday, 11 September 2023 (1 paper)

[443] doi:10.1186/s40478-023-01651-5 [paper, data]

Translocator protein (18kDA) (TSPO) marks mesenchymal glioblastoma cell populations characterized by elevated numbers of tumor-associated macrophages.

Journal: Acta neuropathologica communications

Status: data only, 1 dataset cited

Saturday, 9 September 2023 (1 paper)

[444] doi:10.1016/j.nicl.2023.103507 [paper]

Effects of de-facing software mri_reface on utility of imaging biomarkers used in Alzheimer's disease research.

Journal: NeuroImage. Clinical

Status: code on request

Tuesday, 29 August 2023 (1 paper)

[445] doi:10.1523/eneuro.0215-23.2023 [paper, repository]

Hyperpolarization-Activated Cation Channels Shape the Spiking Frequency Preference of Human Cortical Layer 5 Pyramidal Neurons.

Journal: eNeuro

Authors' code: FKSkinnerLab/HumanL5FDG (no license)

Status: code verified, 263 files readable, 8 matches

Thursday, 24 August 2023 (1 paper)

[446] doi:10.1523/jneurosci.0625-23.2023 [paper, repository]

Multimodal Imaging for Validation and Optimization of Ion Channel-Based Chemogenetics in Nonhuman Primates.

Journal: The Journal of neuroscience : the official journal of the Society for Neuroscience

Authors' code: minamimoto-lab/2023-Hori-PSAMPSEM (no license)

Status: code verified, 8 files readable

Tuesday, 22 August 2023 (1 paper)

[447] doi:10.1002/hbm.26451 [paper, repository]

Indirect evidence for altered dopaminergic neurotransmission in very premature-born adults.

Journal: Human brain mapping

Authors' code: juryxy/JuSpace (no license)

Status: code verified, 21 files readable, 3 matches