Every paper, by date: page 18

44,644 papers with a page: 24,189 with their authors' code, 4,955 with code on request, 15,495 with data only. The most recent first, 224 a page. Page 18 of 200: 18 May 2026 to 12 May 2026.

Monday, 18 May 2026 (44 papers, 34 on this page)

[3809] Code ↔ Paper doi:10.1038/s41467-026-73192-z [paper, repository]

Chromatin- and actin-mediated mitochondrial streaming leads to patterning of mitochondrial distribution in oocytes.

Journal: Nature communications

Authors' code: mathworks.com/matlabcentral/fileexchange (no license), Zenodo 19426009 (CC-BY-4.0)

Status: code verified

[3810] Code ↔ Paper doi:10.1038/s41562-026-02472-x [paper, repository]

Long-term memory reorganization of navigational episodes.

Journal: Nature human behaviour

Authors' code: OSF sb65k (no license)

Status: code verified, 8 files readable, 5 matches

[3811] Code ↔ Paper doi:10.1038/s41562-026-02473-w [paper, repository]

Brain activity, disruption and connectivity comparisons identify origins of human metacognition in other primates.

Journal: Nature human behaviour

Authors' code: neuroecology/MrCat (BSD-3-Clause), neurodata.riken.jp (no license)

Status: code verified, 202 files readable, 4 matches

[3812] Code ↔ Paper doi:10.1038/s41567-026-03306-3 [paper, repository]

Simple input-output dependencies explain neuronal activity.

Journal: Nature physics

Authors' code: ChrisWLynn/Minimal_computation (no license)

Status: code verified, 5 files readable, 2 matches

[3813] Code ↔ Paper doi:10.1038/s41593-026-02267-3 [paper, repository]

Spatial proteomic analysis in human Alzheimer's disease brains enables identification of microenvironment-dependent microglial cell states.

Journal: Nature neuroscience

Authors' code: Teichlab/bbknn (MIT), LouisFaure/scFates (BSD-3-Clause), BaharehAjami/CODEX-CNS (no license)

Status: code verified, 68 files readable, 3 matches

[3814] doi:10.1038/s41598-026-51082-0 [paper, data]

Non-uniform endogenous regeneration of olfactory sensory neuron axons across the mouse olfactory bulb.

Journal: Scientific reports

Status: data only, 1 dataset cited

[3815] doi:10.1038/s41598-026-52908-7 [paper]

Automated classification of benign paroxysmal positional vertigo from video-nystagmography using a delay-aware neural network.

Journal: Scientific reports

Status: code on request

[3816] Code ↔ Paper doi:10.1038/s41598-026-53415-5 [paper, repository]

Computational design and immunoinformatics validation of a T cell multi-epitope vaccine targeting glioblastoma stem cells.

Journal: Scientific reports

Authors' code: sokrypton/colabfold (MIT)

Status: code verified, 74 files readable, 1 match

[3817] Code ↔ Paper doi:10.1038/s42003-026-10262-4 [paper, repository]

Brain-wide information flow dynamics during novel visual processing in humans.

Journal: Communications biology

Authors' code: Zenodo 19643440 (CC-BY-4.0)

Status: code verified, 22 files readable, 5 matches

[3818] Code ↔ Paper doi:10.1038/s42003-026-10280-2 [paper, repository]

Adaptation of hypothalamic CRH neuron responses to stress and pup cues during motherhood.

Journal: Communications biology

Authors' code: argotech.co.nz/fibre-photometry (no license), drive.google.com/drive/folders (no license)

Status: code verified

[3819] Code ↔ Paper doi:10.1038/s42004-026-01991-y [paper, repository]

Simulation-guided chemical direct reprogramming informed by temporal cellular conversion processes at the single-cell level.

Journal: Communications chemistry

Authors' code: Zenodo 18909775 (CC-BY-NC-ND-4.0), hamanolaboratory/superdirecteur (no license)

Status: code verified, 12 files readable

[3820] Code ↔ Paper doi:10.1038/s43587-026-01121-2 [paper, repository]

Predicting categorical and continuous Alzheimer's disease outcomes from a single MRI scan.

Journal: Nature aging

Authors' code: Tencent/MedicalNet (MIT), darenma/MultitaskCognition (no license)

Status: code verified, 12 files readable

[3821] doi:10.1038/s44172-026-00686-5 [paper]

Microfluidic platforms for probing spontaneous functional recovery in hierarchically modular neuronal networks.

Journal: Communications engineering

Status: code on request

[3822] doi:10.1038/s44172-026-00688-3 [paper]

N2G calibrator: a cross-subject adversarial learning framework for neural signal-driven gait tracking in Parkinson's disease.

Journal: Communications engineering

Status: code on request

[3823] doi:10.1073/pnas.2513515123 [paper, data]

ECgo: All-optical induction of single endothelial cell injury and capillary occlusion in the brain.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Status: data only, 1 dataset cited

[3824] doi:10.1073/pnas.2527896123 [paper, data]

Spatially tunable multiomic sequencing using light-driven combinatorial barcoding of molecules in tissues.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Status: code on request, 1 dataset cited

[3825] Code ↔ Paper doi:10.1080/10888438.2026.2672100 [paper, repository]

Reading Disabilities With and Without Co-Occurring ADHD: No Evidence for Additive Impact on Reading Skills.

Journal: Scientific studies of reading : the official journal of the Society for the Scientific Study of Reading

Authors' code: OSF puky6 (no license)

Status: code verified, 1 file readable, 2 matches

[3826] doi:10.1080/19490976.2026.2670854 [paper, data]

<i>Limosilactobacillus reuteri</i> promotes melatonin release from human intestinal organoids via 5'ectonucleotidase activity.

Journal: Gut microbes

Status: data only, 1 dataset cited

[3827] doi:10.1084/jem.20251801 [paper, data]

Identification of secondary microglial formation centers in the human fetal brain.

Journal: The Journal of experimental medicine

Status: data only, 1 dataset cited

[3828] Code ↔ Paper doi:10.1093/braincomms/fcag097 [paper, repository]

Long-term effects of preterm birth on cortical folding trajectories in early childhood.

Journal: Brain communications

Authors' code: ilwoolyu/LocalGyrificationIndex (MIT), ilwoolyu/HSD (MIT)

Status: code verified, 26 files readable, 3 matches

[3829] Code ↔ Paper doi:10.1093/braincomms/fcag176 [paper, repository]

Tau topography subtypes account for clinical heterogeneity and longitudinal trajectories in early-onset Alzheimer's disease.

Journal: Brain communications

Authors' code: rablabservice/EOAD_tauPET_subtype (MIT), Zenodo 837898 (other-open), tompollard/tableone (MIT)

Status: code verified, 73 files readable, 9 matches

[3830] doi:10.1093/nc/niag019 [paper, data]

Decoding hypnotic consciousness: neural and experiential insights into induced and ideomotor suggestions.

Journal: Neuroscience of consciousness

Status: data only, 1 dataset cited

[3831] doi:10.1162/imag.a.1230 [paper]

Assessment of hPod measured by fNIRS as an indicator of brain development in preterm infants.

Journal: Imaging neuroscience (Cambridge, Mass.)

Status: code on request

[3832] doi:10.1371/journal.pcbi.1013448 [paper, data]

The speed limit of visual perception: Bidirectional influence of image memorability and processing speed on perceived duration and recognition.

Journal: PLoS computational biology

Status: data only, 2 datasets cited

[3833] Code ↔ Paper doi:10.1523/eneuro.0471-25.2026 [paper, repository]

Attack Repertoires in Outbred Male CD1-Mice Are Associated with Nucleus Accumbens Neuroligin-2.

Journal: eNeuro

Authors' code: sgoldenlab (no license)

Status: code verified

[3834] doi:10.3389/fncel.2026.1769317 [paper, data]

Transcriptomic signatures of hippocampal active place avoidance memory maintenance.

Journal: Frontiers in cellular neuroscience

Status: data only, 1 dataset cited

[3835] doi:10.3389/fncom.2026.1824898 [paper, data]

Deep learning guided propofol ketamine dosing and inflammation trajectories in elderly burns.

Journal: Frontiers in computational neuroscience

Status: data only, 2 datasets cited

[3836] Code ↔ Paper doi:10.3389/fnins.2026.1770672 [paper, repository]

Multivariate age-related variations in quantitative MRI maps: widespread age-related differences revisited.

Journal: Frontiers in neuroscience

Authors' code: CyclotronResearchCentre/qMRI_MSPM_AgeFx (GPL-2.0)

Status: code verified, 68 files readable, 7 matches

[3837] Code ↔ Paper doi:10.3390/e28050562 [paper, repository]

A Comparative Analysis of Explainable AI (XAI) Techniques for Transparent and Reliable Image Classification.

Journal: Entropy (Basel, Switzerland)

Authors' code: AMLRL-ODU/CompareXAI (Apache-2.0)

Status: code verified, 22 files readable, 2 matches

[3838] doi:10.34133/csbj.0083 [paper, data]

The Role of Astrocyte-Neuron Interactions in Shaping Neuronal Maturation during Human Brain Development.

Journal: Computational and structural biotechnology journal

Status: data only, 1 dataset cited

[3839] Code ↔ Paper doi:10.64898/2026.05.08.26352549 [paper, repository]

Pre- and Post-synapses Contain Lecanemab-reactive Amyloid-β in Post-mortem Human Alzheimer’s Disease Brain

Journal: medRxiv (preprint)

Authors' code: datashare.ed.ac.uk/handle/10283 (no license)

Status: code verified

[3840] doi:10.7554/elife.103359 [paper, data]

Circadian control of a sex-specific behavior in <i>Drosophila</i>.

Journal: eLife

Status: data only, 1 dataset cited

[3841] Code ↔ Paper doi:10.7554/elife.106134 [paper, repository]

Identification and classification of ion channels across the tree of life provide functional insights into understudied CALHM channels.

Journal: eLife

Authors' code: esbgkannan/ionchannels-final-pdf (GPL-3.0)

Status: code verified, 14 files readable, 5 matches

[3842] Code ↔ Paper doi: [paper, repository]

Transcript architecture predetermines m6A remodeling and sensory neuron vulnerability in chemotherapy-induced peripheral neuropathy

Journal: bioRxiv : the preprint server for biology

Authors' code: MelemedjianLab/drg-m6a-architectural-determinism (no license)

Status: dead link

Sunday, 17 May 2026 (7 papers)

[3843] doi:10.1002/ana.78251 [paper]

Continuous Versus Short EEG After Ischemic Stroke: What cEEG Adds for Detecting Abnormalities and Predicting Post-Stroke Epilepsy.

Journal: Annals of neurology

Status: code on request

[3844] Code ↔ Paper doi:10.1002/mrm.70433 [paper, repository]

Single-Shot 2D Radial Echo Planar Imaging for Functional MRI.

Journal: Magnetic resonance in medicine

Authors' code: crettenm/ss-rEPI (no license), Zenodo 19520791 (CC-BY-4.0)

Status: code verified, 304 files readable, 2 matches

[3845] Code ↔ Paper doi:10.1002/mrm.70438 [paper, repository]

Quantifying Cardiac, Respiratory, and Low Frequency Components of CSF Motion From fMRI Inflow Effects.

Journal: Magnetic resonance in medicine

Authors' code: Buntess/fMRI-Flow-Quantification (no license)

Status: code verified, 13 files readable, 3 matches

[3846] Code ↔ Paper doi:10.1016/j.ynirp.2026.100358 [paper, repository]

fNIRS evidence for enhanced brain activity during task-based Arabic learning in virtual reality.

Journal: Neuroimage. Reports

Authors' code: NOBLE1264 (no license), NOBLE1264/fNIRS-Arabic-Language-Learning (no license)

Status: code verified, 15 files readable, 2 matches

[3847] Code ↔ Paper doi:10.1038/s41598-026-52253-9 [paper, repository]

Sequential visual stimuli increase high frequency power in the visual cortex.

Journal: Scientific reports

Authors' code: AllenInstitute/ecephys_spike_sorting (BSD-2-Clause)

Status: code verified, 116 files readable, 1 match

[3848] doi:10.3390/brainsci16050530 [paper, data]

Transcranial Magnetic Stimulation over the Left Inferior Parietal Lobule Facilitates Early-Stage Processing During Natural Chinese-English Bilingual Reading.

Journal: Brain sciences

Status: data only, 1 dataset cited

[3849] Code ↔ Paper doi:10.64898/2026.05.13.26353120 [paper, repository]

WITHDRAWN: Can glucagon like peptide-1 receptor agonists be beneficial for brain health?

Journal: medRxiv (preprint)

Authors' code: MetRXlab/spectra (no license)

Status: code verified, 8 files readable, 3 matches

Saturday, 16 May 2026 (15 papers)

[3850] doi:10.1016/j.dcn.2026.101741 [paper, data]

Pediatric resting EEG collection, preprocessing, and analysis: A systematic review.

Journal: Developmental cognitive neuroscience

Status: data only, 1 dataset cited

[3851] Code ↔ Paper doi:10.1038/s41398-026-04091-6 [paper, repository]

The development of FEDUPP: feeding experimentation device users processing package to assess learning and cognitive flexibility.

Journal: Translational psychiatry

Authors' code: ftlabucsd/FEDUPP (MIT), Zenodo 20277475 (MIT), ftlabucsd/FED3-data (MIT), Zenodo 20277476 (MIT)

Status: code verified, 52 files readable, 2 matches

[3852] doi:10.1038/s41398-026-04094-3 [paper]

A depression-like phenotype is associated with discrete defects in the primary hippocampal circuit.

Journal: Translational psychiatry

Status: code on request

[3853] Code ↔ Paper doi:10.1038/s41467-026-72916-5 [paper, repository]

Precision fMRI reveals that the language network exhibits adult-like left-hemispheric lateralization by 4 years of age.

Journal: Nature communications

Authors' code: OSF 3mvpx (no license), web.conn-toolbox.org/resources/conn-extensions (no license)

Status: code verified, 8 files readable, 2 matches

[3854] Code ↔ Paper doi:10.1038/s41467-026-73045-9 [paper, repository]

Aberration-aware 3D localization microscopy via self-supervised neural-physics learning.

Journal: Nature communications

Authors' code: Li-Lab-SUSTech/LUNAR (GPL-3.0), jdeschamps/htSMLM (LGPL-2.1), Zenodo 19586991 (GPL-3.0)

Status: code verified, 147 files readable, 16 matches

[3855] Code ↔ Paper doi:10.1038/s41467-026-73153-6 [paper, repository]

Latent neural architecture organising shared aesthetic evaluations of visual artworks.

Journal: Nature communications

Authors' code: cognizelab/ARTyficial (GPL-3.0), Zenodo 19486642 (GPL-3.0)

Status: code verified, 32 files readable, 16 matches

[3856] Code ↔ Paper doi:10.1038/s41598-026-50997-y [paper, repository]

Comprehensive benchmarking and explainable machine learning analysis of EEG imagery activity recognition.

Journal: Scientific reports

Authors' code: kaggle.com/code/gcdatkin (no license)

Status: dead link

[3857] doi:10.1038/s41746-026-02759-3 [paper]

Multi-task deep learning assists detection and diagnosis of gliomas and brain metastases.

Journal: NPJ digital medicine

Status: code on request

[3858] Code ↔ Paper doi:10.1038/s42003-026-10250-8 [paper, repository]

Oscillatory network efficiency predicts mood and fatigue during sleep deprivation.

Journal: Communications biology

Authors' code: mathworks.com/help/optim (no license)

Status: code found, still to be checked

[3859] doi:10.1186/s13041-026-01313-2 [paper, data]

REST deficiency and neurogenic-to-gliogenic shift in down syndrome human cerebral organoids.

Journal: Molecular brain

Status: data only, 2 datasets cited

[3860] doi:10.1186/s40359-026-04717-w [paper]

Target detection enhances relational processing of background items: evidence from associative recognition paradigms and EEG.

Journal: BMC psychology

Status: code on request

[3861] doi:10.1186/s40478-026-02312-z [paper, data]

Dissecting acute neuronal responses to glioblastoma using a dual-interface human iPSC neuronal culture platform.

Journal: Acta neuropathologica communications

Status: data only, 1 dataset cited

[3862] doi:10.3390/antiox15050634 [paper, data]

Lipid Remodeling in Mouse SR-B1-Deficient Embryos with Oxidative Stress-Associated Neural Tube Defects.

Journal: Antioxidants (Basel, Switzerland)

Status: data only, 1 dataset cited

[3863] doi:10.3390/bioengineering13050565 [paper, data]

Explainable Neutrosophic Knowledge Distillation Model for Ocular Disease Classification Using Ultra-Wide Field Fundus Images.

Journal: Bioengineering (Basel, Switzerland)

Status: data only, 1 dataset cited

[3864] Code ↔ Paper doi:10.3390/ijms27104466 [paper, repository]

Uncovering the Key Circuit FOSL2/FOS/EGR3/EGR1, Contributing to the Hyperexcitability of Excitatory Neurons in the Epileptic Temporal Cortex and Hippocampus.

Journal: International journal of molecular sciences

Authors' code: khodosevichlab/Epilepsy19 (MIT), Zhangyunpeng1987/Epilepsy (MIT)

Status: code verified, 65 files readable, 26 matches

Friday, 15 May 2026 (38 papers)

[3865] doi:10.1016/j.bpsgos.2026.100760 [paper, data]

Prediction and Prediction Error in Autism: A Meta-Analysis of Functional Magnetic Resonance Imaging Results.

Journal: Biological psychiatry global open science

Status: data only, 1 dataset cited

[3866] Code ↔ Paper doi:10.1016/j.isci.2026.115942 [paper, repository]

Assessing the degree of cortical dislamination through electrical pattern analysis.

Journal: iScience

Authors' code: Zenodo 15592455 (CC-BY-4.0)

Status: code verified

[3867] doi:10.1016/j.xpro.2026.104564 [paper]

Protocol for monitoring neurotransmitter release upon projection-specific activation in mouse dorsal raphe nucleus via in vivo fiber photometry.

Journal: STAR protocols

Status: code on request

[3868] doi:10.1038/s41380-026-03644-x [paper, data]

Effects of SSRIs on the spatial transcriptome of dorsal raphe serotonin neurons.

Journal: Molecular psychiatry

Status: code on request, 1 dataset cited

[3869] Code ↔ Paper doi:10.1038/s41398-026-04079-2 [paper, repository]

Neural Responses to Affective Sentences Reveal Signatures of Depression.

Journal: Translational psychiatry

Authors' code: Uncertain-Quark/eeg_depression_classification_tpsych (no license)

Status: code verified, 17 files readable

[3870] Code ↔ Paper doi:10.1038/s41398-026-04098-z [paper, repository]

Neural imbalance between feedback sensitivity and motor inhibition in compulsivity and negative urgency.

Journal: Translational psychiatry

Authors' code: OSF qb4jp (no license)

Status: code verified, 24 files readable, 6 matches

[3871] Code ↔ Paper doi:10.1038/s41467-026-73032-0 [paper, repository]

Fast efficient coding and sensory adaptation in gain-adaptive recurrent networks.

Journal: Nature communications

Authors' code: OSF wa7hm (no license)

Status: code verified, 2 files readable, 4 matches

[3872] Code ↔ Paper doi:10.1038/s41467-026-73072-6 [paper, repository]

Mapping the spatiotemporal continuum of structural connectivity development across the human connectome in youth.

Journal: Nature communications

Authors' code: CuiLabCIBR/SCDevelopment (no license), Zenodo 19549943 (CC-BY-4.0)

Status: code verified, 52 files readable, 13 matches

[3873] Code ↔ Paper doi:10.1038/s41467-026-73171-4 [paper, repository]

Dissecting epigenetic heterogeneity in single-cell DNA methylomes with a unified framework.

Journal: Nature communications

Authors' code: bulik/ldsc (GPL-3.0), BioX-NKU/scMethCraft (MIT), Zenodo 19549979 (MIT)

Status: code verified, 97 files readable, 12 matches

[3874] Code ↔ Paper doi:10.1038/s41467-026-73263-1 [paper, repository]

Distributed neural codes of the 3D position in the marmoset frontal cortex and hippocampus.

Journal: Nature communications

Authors' code: XuChunLab/Marmoset3D (no license)

Status: code verified, 46 files readable

[3875] Code ↔ Paper doi:10.1038/s41537-026-00761-y [paper, repository]

The role of fear learning in the development of psychosis: an EEG study utilizing a differential fear conditioning paradigm in people with psychotic vulnerability.

Journal: Schizophrenia (Heidelberg, Germany)

Authors' code: OSF fj9cg (no license)

Status: code verified, 5 files readable, 3 matches

[3876] Code ↔ Paper doi:10.1038/s41593-026-02287-z [paper, repository]

Autism subtypes identified using cross-species functional connectivity analyses.

Journal: Nature neuroscience

Authors' code: functional-neuroimaging/rsfMRI-preprocessing (no license), functional-neuroimaging/rsfMRI-global-local-connectivity (no license), functional-neuroimaging/gene_decoding_and_enrichment (no license), functional-neuroimaging/biological_subtyping (no license)

Status: code verified, 32 files readable, 14 matches

[3877] Code ↔ Paper doi:10.1038/s41598-026-46149-x [paper, repository]

Dynamic neural representations of scene beauty are relatively unaffected by stimulus timing and task.

Journal: Scientific reports

Authors' code: OSF fj6sq (no license)

Status: code verified, 6 files readable, 1 match

[3878] doi:10.1038/s41598-026-48795-7 [paper, data]

Sustainable science mapping: benchmarking green AI against transformers for cross-disciplinary abstract classification using arXiv.

Journal: Scientific reports

Status: data only, 1 dataset cited

[3879] Code ↔ Paper doi:10.1038/s41598-026-49471-6 [paper, repository]

Canonical coherence for the estimation of within- and cross-frequency cortico-kinematic interactions.

Journal: Scientific reports

Authors' code: CarmenVidaurre/cacoh (no license)

Status: code verified, 3 files readable, 2 matches

[3880] doi:10.1038/s41598-026-51023-x [paper, data]

Adaptive patch sampling and location-aware reasoning for whole body PET-CT multi-organ segmentation.

Journal: Scientific reports

Status: data only, 1 dataset cited

[3881] Code ↔ Paper doi:10.1038/s41598-026-53133-y [paper, repository]

Evolutionary stasis in synapsid encephalization during the end-permian mass extinction.

Journal: Scientific reports

Authors' code: LucasLegendre/synapsid_EQ (no license)

Status: code verified, 3 files readable, 6 matches

[3882] Code ↔ Paper doi:10.1038/s41598-026-53143-w [paper, repository]

Performance Studies on machine learning based channel modelling for vehicular visible light communication.

Journal: Scientific reports

Authors' code: woven-visionai/wts-dataset (no license), Zenodo 19975161 (MIT), micro4cloud/my-paper-code (MIT)

Status: code verified, 31 files readable, 1 match

[3883] Code ↔ Paper doi:10.1038/s41746-026-02732-0 [paper, repository]

A dynamic risk prediction framework for Alzheimer's disease and related dementias with interpretability.

Journal: NPJ digital medicine

Authors' code: PeterChe1990/GRU-D (MIT), ruanxiaoyang-ut/gru-d-retain (other)

Status: code verified, 15 files readable, 2 matches

[3884] Code ↔ Paper doi:10.1038/s42003-026-10259-z [paper, repository]

Spatial transcriptomic profiling of developing mouse hearts reveals a spatially patterned signaling environment.

Journal: Communications biology

Authors' code: BayraktarLab/cell2location (Apache-2.0), Zenodo 14341430 (CC-BY-4.0)

Status: code verified, 64 files readable, 10 matches

[3885] Code ↔ Paper doi:10.1038/s44271-026-00468-x [paper, repository]

Inter-brain processes during Live and Represented social moments are inter-related and shaped by behavioral synchrony.

Journal: Communications psychology

Authors' code: OSF 57m94 (no license), Yoavshapira1/FelmanLabEEGpipeline (no license)

Status: code found, still to be checked, 1 file readable

[3886] doi:10.1093/oons/kvag003 [paper, data]

An examination of the influence of prefrontal cortical brain stimulation on sexual decision making.

Journal: Oxford open neuroscience

Status: data only, 1 dataset cited

[3887] doi:10.1097/j.pain.0000000000003999 [paper, data]

Hypermobility and chronic pain in adolescents: diverging functional and neural profiles without sensory differences.

Journal: Pain

Status: data only, 1 dataset cited

[3888] Code ↔ Paper doi:10.1126/sciadv.adv3557 [paper, repository]

GRASPing experience-dependent protein expression signatures enriched for hippocampal engram cell synapses.

Journal: Science advances

Authors' code: Zenodo 18893207 (CC-BY-4.0), Zenodo 18893206 (CC-BY-4.0)

Status: code verified, 8 files readable, 4 matches

[3889] doi:10.1126/sciadv.aeb6961 [paper, data]

Hcn1-dependent engram neurons in the PVN encode gastric inflammatory sensitization.

Journal: Science advances

Status: data only, 1 dataset cited

[3890] doi:10.1126/sciadv.aeb7558 [paper, data]

An engineered insulin analog with dual insulin and IGF-1 receptor agonism and distinct signaling.

Journal: Science advances

Status: data only, 4 datasets cited

[3891] doi:10.1128/jvi.00208-26 [paper, data]

MicroRNA-124-targeted recombinant Zika virus: a dual-functional and safe candidate for vaccination and oncolytic virotherapy.

Journal: Journal of virology

Status: data only, 1 dataset cited

[3892] doi:10.1172/jci190954 [paper]

Modulation of WNT and FGF18 enhances yield and subtype identity of hPSC-derived midbrain dopamine neurons.

Journal: The Journal of clinical investigation

Status: data only

[3893] Code ↔ Paper doi:10.1177/11795972251404254 [paper, repository]

Blind Identification of Altered Functional Subnetworks in Alzheimer's Disease Using Resting-State fMRI.

Journal: Biomedical engineering and computational biology

Authors' code: ICA-RAICAR-Pruning/Code (no license)

Status: code verified, 2 files readable

[3894] Code ↔ Paper doi:10.1186/s12915-026-02630-7 [paper, repository]

Phasic modulation of attentional rhythmic sampling according to task demands.

Journal: BMC biology

Authors' code: perevo/attentiondynamicsKQ (no license)

Status: code verified, 2 files readable, 3 matches

[3895] Code ↔ Paper doi:10.1371/journal.pone.0346695 [paper, repository]

Age and language experience modulate predictive processing in the visual modality.

Journal: PloS one

Authors' code: evie1706/SL_age (CC-BY-4.0)

Status: empty repository, 2 files readable

[3896] doi:10.1371/journal.pone.0349101 [paper, data]

Overexpression of key complement regulators in glioblastoma.

Journal: PloS one

Status: data only, 1 dataset cited

[3897] Code ↔ Paper doi:10.3390/ijms27104446 [paper, repository]

Integration of Brain Proteomes and Genome-Wide Association Data Identifies GLO1 as a Candidate Causal Gene and Therapeutic Target for Restless Legs Syndrome.

Journal: International journal of molecular sciences

Authors' code: arose/ngl (MIT)

Status: code verified, 819 files readable

[3898] Code ↔ Paper doi:10.3390/s26103131 [paper, repository]

Neuromagnetism "On the Cheap": Evaluating a Combined Cylindrical Shield and Partial-Coverage OPM-MEG System for Detecting Sensorimotor Responses in Humans.

Journal: Sensors (Basel, Switzerland)

Authors' code: lyambailey/OPM_MNSBP (BSD-3-Clause)

Status: code verified, 18 files readable, 15 matches

[3899] doi:10.3892/ijmm.2026.5849 [paper]

miR‑223‑3p promotes microglial lactylation and M1 polarization via the FBXW7/Notch1/Hes1/SIRT1 axis.

Journal: International journal of molecular medicine

Status: data only

[3900] Code ↔ Paper doi:10.64898/2026.05.08.26348885 [paper, repository]

Insights from nine nights of self-applied, low-density sleep EEG during sleep restriction therapy: a proof-of-concept evaluation

Journal: medRxiv (preprint)

Authors' code: emstanyer/The-RESTORE-Study (CC-BY-4.0)

Status: code verified, 16 files readable, 7 matches

[3901] Code ↔ Paper doi:10.64898/2026.05.12.26353056 [paper, repository]

Neuroimaging and behavioural biomarkers of post-stroke cognitive recovery outcomes

Journal: medRxiv (preprint)

Authors' code: OSF 9zkyh (no license)

Status: code verified, 7 files readable

[3902] Code ↔ Paper doi:10.7554/elife.93664 [paper, repository]

Drug-induced changes in connectivity to midbrain dopamine cells revealed by rabies monosynaptic tracing.

Journal: eLife

Authors' code: ejcorn/mouse_abi_tool (MIT), ktbartas/Bartas_et_al_eLife_2024 (MIT)

Status: code verified, 21 files readable, 11 matches

Thursday, 14 May 2026 (28 papers)

[3903] Code ↔ Paper doi:10.1002/mrm.70431 [paper, repository]

SelExNet: A Self-Supervised Physics-Informed Framework for Multi-Channel Joint RF and Gradient Waveform Optimization in 2D Spatially Selective Excitation.

Journal: Magnetic resonance in medicine

Authors' code: chiew-group/SelExNet (no license)

Status: code verified, 12 files readable, 4 matches

[3904] Code ↔ Paper doi:10.1007/s10571-026-01743-5 [paper, repository]

Adapted Smart-seq3xpress Facilitates Selective Microglial Transcriptomic Profiling From Frozen Brain Tissue.

Journal: Cellular and molecular neurobiology

Authors' code: GliaOmicsLab/microglia-sc-snRNAseq (no license)

Status: code verified, 18 files readable, 19 matches

[3905] doi:10.1016/j.neuroimage.2026.122004 [paper, data]

Preventing visual feedback of the moving limb during grasping preferentially activates parietofrontal premotor areas.

Journal: NeuroImage

Status: data only, 1 dataset cited

[3906] doi:10.1016/j.omta.2026.201760 [paper]

<i>In vivo</i> adenine base editing rescues brain biochemistry and improves motor deficits in a common phenylketonuria variant.

Journal: Molecular therapy. Advances

Status: code on request

[3907] Code ↔ Paper doi:10.1016/j.stemcr.2026.102922 [paper, repository]

Spatially resolved transcriptomics identifies intercellular signaling post-ischemic stroke that controls neural stem cell proliferation.

Journal: Stem cell reports

Authors' code: jinworks/CellChat (GPL-3.0)

Status: code verified, 23 files readable, 2 matches

[3908] doi:10.1016/j.stemcr.2026.102924 [paper]

PrP<sup>C</sup>-facilitated cell signaling activates phospholipase Cɣ1 and triggers an Arc/Arg3.1 response in mouse and iPSC-derived human neurons.

Journal: Stem cell reports

Status: code on request

[3909] Code ↔ Paper doi:10.1038/s41467-026-73007-1 [paper, repository]

Single-nucleus epigenomic dysregulation unmasks genetic risk-associated neurodegenerative glia states.

Journal: Nature communications

Authors' code: rexachgroup/pci_snATAC (MIT), Zenodo 18904265 (MIT)

Status: code verified, 118 files readable, 28 matches

[3910] doi:10.1038/s41467-026-73065-5 [paper, data]

Polycomb chromatin topology enables long-range enhancer recruitment during craniofacial development.

Journal: Nature communications

Status: data only, 1 dataset cited

[3911] Code ↔ Paper doi:10.1038/s41593-026-02300-5 [paper, repository]

Integrated single-cell and spatial transcriptomic profiling in ALS uncovers peripheral-to-central immune infiltration and reprogramming.

Journal: Nature neuroscience

Authors' code: gatelabNW/als_immune_public (no license), KiskinisLab/TargetALS-BulkAnalysis (no license)

Status: code verified, 412 files readable, 38 matches

[3912] doi:10.1038/s41598-026-50240-8 [paper, data]

High-precision brain tumor segmentation with switchable normalization in faster R-CNN architecture.

Journal: Scientific reports

Status: data only, 3 datasets cited

[3913] doi:10.1038/s41598-026-51542-7 [paper, data]

Brain tumor classification using fractional Laplacian image enhancement and vision transformer.

Journal: Scientific reports

Status: data only, 1 dataset cited

[3914] Code ↔ Paper doi:10.1038/s41598-026-52490-y [paper, repository]

Research on contextual sentiment recognition based on neural encoding and decoding and knowledge guidance.

Journal: Scientific reports

Authors' code: OSF 5nxzq (no license)

Status: code verified, 22 files readable, 34 matches

[3915] Code ↔ Paper doi:10.1088/1741-2552/ae5fd7 [paper, repository]

Metric validation for detection of delayed and directed coupling.

Journal: Journal of neural engineering

Authors' code: hermandarrowlab (no license), pwollstadt/IDTxl (GPL-3.0), hermandarrowlab/ec-metrics-validation (no license)

Status: code verified, 190 files readable, 7 matches

[3916] doi:10.1111/pcn.70075 [paper, data]

Network-level disconnectivity tracks poststroke depressive symptom improvement.

Journal: Psychiatry and clinical neurosciences

Status: data only, 1 dataset cited

[3917] doi:10.1155/da/2699511 [paper, data]

Fear Generalization in Adolescent Anxiety Disorders: A MEG Study.

Journal: Depression and anxiety

Status: data only, 1 dataset cited

[3918] doi:10.1186/s12951-026-04489-w [paper, data]

A versatile nanobody platform for live and super-resolution imaging of synaptic vesicle dynamics and plasticity in rodent and human neurons.

Journal: Journal of nanobiotechnology

Status: data only, 1 dataset cited

[3919] doi:10.1186/s13024-026-00944-2 [paper, data]

TDP-43: [GU]-ardian of the transcriptome.

Journal: Molecular neurodegeneration

Status: data only, 1 dataset cited

[3920] Code ↔ Paper doi:10.1186/s13195-026-02081-w [paper, repository]

Cellular state heterogeneity underlying sex differences in Alzheimer's disease based on single-cell transcriptome.

Journal: Alzheimer's research & therapy

Authors' code: 327025640/AD-sex-difference (no license)

Status: code verified, 5 files readable, 7 matches

[3921] Code ↔ Paper doi:10.1371/journal.pbio.3003789 [paper, repository]

Encoding performance of cortical neurons critically depends on their morphological and neurophysiological properties.

Journal: PLoS biology

Authors' code: Anneef/AnTools (GPL-3.0)

Status: empty repository, 2 files readable

[3922] Code ↔ Paper doi:10.1371/journal.pcbi.1013499 [paper, repository]

VesiclePy: A machine learning vesicle analysis toolbox for volume electron microscopy.

Journal: PLoS computational biology

Authors' code: pytorchconnectomics/vesiclepy (MIT), Zenodo 16644943 (CC-BY-4.0)

Status: code verified, 67 files readable, 4 matches

[3923] Code ↔ Paper doi:10.1371/journal.pcbi.1014156 [paper, repository]

Art's hidden topology: A window into human perception.

Journal: PLoS computational biology

Authors' code: edd26/arttoppaper (no license)

Status: code verified, 47 files readable, 6 matches

[3924] Code ↔ Paper doi:10.2463/mrms.mp.2024-0149 [paper, repository]

Image Distortion Correction for Diffusion MR Imaging Using a Transformer-based U-Net.

Journal: Magnetic resonance in medical sciences : MRMS : an official journal of Japan Society of Magnetic Resonance in Medicine

Authors' code: MASILab/Synb0-DISCO (no license), junyuchen245/transmorph_transformer_for_medical_image_registration (MIT)

Status: code verified, 387 files readable, 6 matches

[3925] doi:10.3389/fpsyg.2026.1821889 [paper, data]

Gomisin E attenuates pentobarbital-induced sleep deficits in aging-related insomnia: an <i>in vivo</i> and <i>in silico</i> study implicating cholinergic signaling.

Journal: Frontiers in psychology

Status: data only, 1 dataset cited

[3926] doi:10.3390/biomedicines14051110 [paper, data]

Ligand-Receptor Interaction Combined with Histopathology Improves Glioma Prognostic Model.

Journal: Biomedicines

Status: data only, 1 dataset cited

[3927] Code ↔ Paper doi:10.34133/csbj.0108 [paper, repository]

Latent Factor Modeling Reveals Unexpected Spatial Heterogeneity in Human Alzheimer's Disease Brain Transcriptomes.

Journal: Computational and structural biotechnology journal

Authors' code: LiuzLab/AD_LatentFactor (MIT)

Status: code verified, 6 files readable, 3 matches

[3928] Code ↔ Paper doi:10.7554/elife.103566 [paper, repository]

Effort produces after-effects costly for others but valued for self.

Journal: eLife

Authors' code: OSF bvpa2 (no license)

Status: code verified, 3 files readable, 1 match

[3929] Code ↔ Paper doi:10.7554/elife.108934 [paper, repository]

A meta-analysis suggests that TMS targeting the hippocampal network selectively improves episodic memory.

Journal: eLife

Authors' code: doi:10.5061/dryad.vhhmgqp86 (no license)

Status: code verified

[3930] doi:10.7554/elife.109611 [paper, data]

Subregional activity in the dentate gyrus is amplified during elevated cognitive demands.

Journal: eLife

Status: data only, 1 dataset cited

Wednesday, 13 May 2026 (61 papers)

[3931] Code ↔ Paper doi:10.1007/s00429-026-03103-x [paper, repository]

Location and mapping of the human rostromedial tegmental nucleus and associated midbrain inhibitory nuclei regulating dopamine neurons.

Journal: Brain structure & function

Authors' code: Zenodo 17946370 (CC-BY-4.0)

Status: code verified

[3932] doi:10.1007/s00737-026-01707-0 [paper, data]

Maternal depression symptoms as a context for longitudinal changes in the perinatal brain and infant emotion outcomes.

Journal: Archives of women's mental health

Status: data only, 1 dataset cited

[3933] doi:10.1007/s10162-026-01052-0 [paper, data]

White Matter Alterations Are More Robust Than Gray Matter Differences in Tinnitus and Hearing Loss: An MRI Study of Military Personnel.

Journal: Journal of the Association for Research in Otolaryngology : JARO

Status: data only, 2 datasets cited

[3934] Code ↔ Paper doi:10.1007/s10827-026-00935-8 [paper, repository]

A biophysically grounded model of glutamatergic synaptic transmission integrating glutamate transport, receptor kinetics, and electrotonic effects.

Journal: Journal of computational neuroscience

Authors' code: antonvchizhov/EAAT-paper (no license)

Status: code verified, 5 files readable, 3 matches

[3935] Code ↔ Paper doi:10.1007/s10827-026-00936-7 [paper, repository]

When can neuronal activity-dependent homeostatic plasticity maintain circuit-level properties?

Journal: Journal of computational neuroscience

Authors' code: Zenodo 18509900 (bsd-2-clause-netbsd), ljstolting/adhp-maintains-pyloricness (BSD-2-Clause)

Status: code verified, 36 files readable, 2 matches

[3936] doi:10.1016/j.crmeth.2026.101455 [paper]

An optimized method to visualize lipid droplets in mouse brain tissue.

Journal: Cell reports methods

Status: code on request

[3937] doi:10.1016/j.neuroimage.2026.122002 [paper]

EEG-based clustering shows distinct separation of chronic pain patients before spinal cord stimulation surgery.

Journal: NeuroImage

Status: code on request

[3938] doi:10.1016/j.omta.2026.201757 [paper]

Extracellular vesicles as biomarkers of disease progression and therapeutic response in patients with spinal muscular atrophy.

Journal: Molecular therapy. Advances

Status: code on request

[3939] Code ↔ Paper doi:10.1016/j.xcrm.2026.102800 [paper, repository]

Recombinant dimeric PICK1 peptide inhibitors for long-term relief of chronic pain by AAV therapeutics.

Journal: Cell reports. Medicine

Authors' code: AllonKleinLab/scrublet (MIT), kharchenkolab/pagoda2 (no license), kharchenkolab/conos (GPL-3.0)

Status: code verified, 132 files readable, 4 matches

[3940] doi:10.1016/j.ymthe.2026.05.008 [paper]

Systemic dual-gene therapy reverses biochemical intoxication in the central metabolic compartment of Bckdha-/- mice.

Journal: Molecular therapy : the journal of the American Society of Gene Therapy

Status: code on request

[3941] doi:10.1021/acs.chemrev.5c00878 [paper, data]

Self-Oscillatory Neuron-like Devices for Unconventional Computing Applications.

Journal: Chemical reviews

Status: data only, 2 datasets cited

[3942] Code ↔ Paper doi:10.1038/s41380-026-03629-w [paper, repository]

Maternal fasting during early gestation induces epigenetic alterations and schizophrenia-related phenotypes.

Journal: Molecular psychiatry

Authors' code: HonboW77/Maternal-fasting (no license)

Status: code verified, 16 files readable, 10 matches

[3943] Code ↔ Paper doi:10.1038/s41398-026-03952-4 [paper, repository]

Perineuronal nets in cerebellar nuclei neurons orchestrate social behaviour via regulation of neuronal activity in circuits innervated by the cerebellum.

Journal: Translational psychiatry

Authors' code: justuskebschull/cncode_final (no license)

Status: code verified, 110 files readable

[3944] Code ↔ Paper doi:10.1038/s41398-026-04081-8 [paper, repository]

Functional system-specific brain aging across the Alzheimer's disease continuum.

Journal: Translational psychiatry

Authors' code: xuanmer/NetworkBrainAge (MIT), xuanmer/StatisticalAnalysis (MIT)

Status: code verified, 18 files readable, 10 matches

[3945] Code ↔ Paper doi:10.1038/s41398-026-04100-8 [paper, repository]

Bridging molecules and connectome: network biomarkers guided by neurotransmitter architecture in major depressive disorder.

Journal: Translational psychiatry

Authors' code: Jfortin1/ComBatHarmonization (no license)

Status: code verified, 17 files readable

[3946] Code ↔ Paper doi:10.1038/s41467-026-72545-y [paper, repository]

Personalized machine learning-guided radiation dose escalation in newly diagnosed glioblastoma: prospective pilot study.

Journal: Nature communications

Authors' code: CBICA/AI-guided-radiation-dose-escalation (no license), Zenodo 18920301 (CC-BY-4.0)

Status: code verified, 22 files readable, 5 matches

[3947] Code ↔ Paper doi:10.1038/s41467-026-72868-w [paper, repository]

Cortical knowledge structures guide word concept learning.

Journal: Nature communications

Authors' code: OSF wrt9s (no license)

Status: code verified, 6 files readable

[3948] Code ↔ Paper doi:10.1038/s41467-026-72940-5 [paper, repository]

Cerebellar growth is associated with domain-specific cerebral maturation and socio-linguistic behavior.

Journal: Nature communications

Authors' code: kmanoli/NormCerebellum (MIT), iBEAT-V2/iBEAT-V2.0-Docker (no license), shuohan/acapulco (no license), amarquand/PCNtoolkit (GPL-3.0)

Status: code verified, 170 files readable, 12 matches

[3949] doi:10.1038/s41467-026-72942-3 [paper, data]

MeCP2 Governs maternal hyperandrogenism-induced cortical defects and behavioral alterations via noncanonical AR-dependent regulation of Mef2c.

Journal: Nature communications

Status: data only, 1 dataset cited

[3950] doi:10.1038/s41467-026-73011-5 [paper, data]

Greatwall depletion from Xenopus oocytes reveals a key role of the cyclin B/CDK1-PP2A-B55 balance in the coordination of meiotic events.

Journal: Nature communications

Status: data only, 2 datasets cited

[3951] Code ↔ Paper doi:10.1038/s41514-026-00391-9 [paper, repository]

Region-specific transcriptional signatures of brain aging in the absence of neuropathology at the single-cell level.

Journal: npj aging

Authors' code: neurogenetics/adrd_brain_aging (no license), Zenodo 14040699 (CC-BY-4.0), neurogenetics/saha (MIT)

Status: code verified, 134 files readable, 15 matches

[3952] Code ↔ Paper doi:10.1038/s41586-026-10454-2 [paper, repository]

White matter micro- and macrostructure brain charts for the human lifespan.

Journal: Nature

Authors' code: Zenodo 15367425 (CC-BY-NC-4.0), Zenodo 14058394 (CC-BY-4.0), Zenodo 17144460 (CC-BY-4.0), hub.docker.com/r/kimm58 (no license), Zenodo 18435695 (CC-BY-NC-4.0)

Status: code verified, 2 files readable

[3953] Code ↔ Paper doi:10.1038/s41586-026-10490-y [paper, repository]

Lineage and organ signals sequentially build organ intrinsic nervous systems.

Journal: Nature

Authors' code: lezhanglab/Organ-Intrinsic-Nervous-Systems (no license)

Status: code verified, 22 files readable, 20 matches

[3954] Code ↔ Paper doi:10.1038/s41586-026-10501-y [paper, repository]

Long-term editing of brain circuits using an engineered electrical synapse.

Journal: Nature

Authors' code: carlson-lab/FETCH (no license), carlson-lab/VMD-and-NAMD-Connexin-Protein-Simulation-Protocol (CC-BY-4.0), carlson-lab/OptoLinCx (no license)

Status: code verified, 74 files readable, 13 matches

[3955] Code ↔ Paper doi:10.1038/s41586-026-10515-6 [paper, repository]

An X-linked long non-coding RNA, PTCHD1-AS, and the core features of autism.

Journal: Nature

Authors' code: pwilmart/PAW_pipeline (MIT)

Status: code verified, 14 files readable, 1 match

[3956] doi:10.1038/s41598-026-48825-4 [paper, data]

YOLO-LS: a novel deep learning framework for brain tumor segmentation in Magnetic Resonance Imaging.

Journal: Scientific reports

Status: data only, 2 datasets cited

[3957] doi:10.1038/s41598-026-51295-3 [paper, data]

Immune landscape of the affected brain in Rasmussen encephalitis.

Journal: Scientific reports

Status: data only, 1 dataset cited

[3958] Code ↔ Paper doi:10.1038/s41698-026-01475-1 [paper, repository]

Radiomics model integrating MRI and ECV enhances prediction accuracy for progression in high-grade glioma.

Journal: NPJ precision oncology

Authors' code: 410312774/MobHyNet (no license)

Status: code verified, 2 files readable, 2 matches

[3959] Code ↔ Paper doi:10.1038/s41746-026-02735-x [paper, repository]

Multimodal interpretable deep learning for transcriptome-informed precision oncology and drug mechanism analysis.

Journal: NPJ digital medicine

Authors' code: myzhengSIMM/BioGDR (Apache-2.0), Zenodo 15718571 (Apache-2.0)

Status: code verified, 33 files readable

[3960] Code ↔ Paper doi:10.1038/s42003-026-10045-x [paper, repository]

Spatiotemporal brain transcriptomics reveal risk gene hot-spots in major neuropsychiatric disorders.

Journal: Communications biology

Authors' code: liuwq2010/Neuropsychiatric-risk-gene-spatiotemporal-expression (MIT), Zenodo 19097352 (CC-BY-4.0)

Status: code verified, 3 files readable, 15 matches

[3961] Code ↔ Paper doi:10.1038/s42003-026-10246-4 [paper, repository]

Cortical representation of pitch perception in mice.

Journal: Communications biology

Authors' code: Zenodo 19616783 (CC-BY-4.0), soundcortex/francislabafm (no license)

Status: code verified, 10 files readable, 5 matches

[3962] Code ↔ Paper doi:10.1039/d5dd00190k [paper, repository]

Identification of drug candidates against glioblastoma with machine learning and high-throughput screening of heterogeneous cellular models.

Journal: Digital discovery

Authors' code: Zenodo 17100377 (CC-BY-4.0)

Status: code verified, 1 file readable, 2 matches

[3963] Code ↔ Paper doi:10.1093/braincomms/fcag172 [paper, repository]

Early-life blood pressure and midlife brain and cognitive health: tests in two birth cohorts.

Journal: Brain communications

Authors' code: scottchiesa/early-life-bp-cog-brain (no license)

Status: code verified, 3 files readable

[3964] Code ↔ Paper doi:10.1111/cobi.70323 [paper, repository]

Integrating fossil data in ecological niche models to improve predictions of future habitat of Caribbean corals.

Journal: Conservation biology : the journal of the Society for Conservation Biology

Authors' code: supp:PMC13613574/COBI-40-e70323-s014.R (no license)

Status: code verified, 1 file readable, 2 matches

[3965] Code ↔ Paper doi:10.1126/sciadv.adz5324 [paper, repository]

High mannose content of mesenchymal glioblastoma correlates with hydroxyl proton transfer-weighted (HPTw) MRI as noninvasive biomarker of tumor aggressiveness.

Journal: Science advances

Authors' code: kennedykrieger.org/kirby-research-center/software-databases (no license)

Status: code verified

[3966] Code ↔ Paper doi:10.1126/sciadv.aeb8106 [paper, repository]

A thyroid hormone-mediated opsin switch initiates metamorphosis in a proto-vertebrate.

Journal: Science advances

Authors' code: andreamariossi/thyroid_hormone_Ciona (no license), Zenodo 19336448 (CC-BY-4.0)

Status: code verified, 28 files readable, 10 matches

[3967] Code ↔ Paper doi:10.1126/sciadv.aec2042 [paper, repository]

IgLON5 autoimmune antibodies activate Tau via neuronal hyperactivity.

Journal: Science advances

Authors' code: gitlab.dzne.de/ag-ulas/iglon5-autoimmune-antibody-influence-on-neurons (LGPL-3.0), Zenodo 19454006 (CC-BY-4.0), gitlab.dzne.de/grundschoettelp/iglon5-autoimmune-antibody-influence-on-neurons (LGPL-3.0)

Status: code verified, 9 files readable, 1 match

[3968] Code ↔ Paper doi:10.1162/imag.a.1229 [paper, repository]

40 Hz audiovisual stimulation improves sustained attention and related brain oscillations.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: singerlabgt/FlickerEEGAttention_HealthyAdults_Manuscript (no license)

Status: code verified, 869 files readable, 13 matches

[3969] doi:10.1186/s12929-026-01253-y [paper, data]

Modeling CLN3 Batten disease in astrocytes reveals alterations in mitochondria homeostasis, fatty acid metabolism and oxidative stress response.

Journal: Journal of biomedical science

Status: data only, 3 datasets cited

[3970] doi:10.1186/s12974-026-03869-1 [paper, data]

Butyrate-producing gut bacteria restrain PBAT microplastic-triggered brain microglial lipotoxicity via a microbiota-butyrate-mTORC1-ISR relay along the gut-brain axis.

Journal: Journal of neuroinflammation

Status: data only, 1 dataset cited

[3971] doi:10.1186/s40478-026-02318-7 [paper, data]

Glioblastoma cells utilize evolutionarily adapted cell metabolism to promote their malignant proliferation.

Journal: Acta neuropathologica communications

Status: data only, 1 dataset cited

[3972] Code ↔ Paper doi:10.1186/s41747-026-00735-w [paper, repository]

Dual-conditioned diffusion model with anatomical guidance for geometric distortion correction in prostate MRI.

Journal: European radiology experimental

Authors' code: nainye/DeDistortNet (Apache-2.0)

Status: code verified, 7 files readable, 5 matches

[3973] doi:10.1242/jeb.252487 [paper, data]

Antho-RFamide effect on light production in the bioluminescent sea pen Pennatula phosphorea (Octocorallia, Pennatulacea).

Journal: The Journal of experimental biology

Status: data only, 1 dataset cited

[3974] doi:10.1371/journal.pbio.3003768 [paper, data]

Premotor cortex hemodynamic responses primarily reflect perceptual rather than specific motor aspects of decision making.

Journal: PLoS biology

Status: data only, 1 dataset cited

[3975] Code ↔ Paper doi:10.1371/journal.pcbi.1013463 [paper, repository]

A multi-frequency whole-brain neural mass model with homeostatic feedback inhibition.

Journal: PLoS computational biology

Authors' code: carlosmig/EEG-Dementias (no license), Zenodo 18841259 (CC-BY-4.0)

Status: code verified, 23 files readable, 17 matches

[3976] doi:10.1371/journal.pone.0349032 [paper, data]

Neural and behavioral evidence of free shipping on consumer decision making.

Journal: PloS one

Status: data only, 1 dataset cited

[3977] Code ↔ Paper doi:10.1523/eneuro.0091-26.2026 [paper, repository]

Population Coupling of V1 and V4 Neurons and Its Relation to Local Cortical State Fluctuations and Attention in Macaque Monkey.

Journal: eNeuro

Authors' code: nmd174/md-soloists-and-choristers (no license)

Status: code verified, 11 files readable, 1 match

[3978] Code ↔ Paper doi:10.1523/jneurosci.1956-25.2026 [paper, repository]

KChIP4a is a Biophysical Amplifier of Inhibition in Atypical Dopamine Neurons and Controls Learning from Negative Prediction Errors.

Journal: The Journal of neuroscience : the official journal of the Society for Neuroscience

Authors' code: modeldb:2019874 (no license)

Status: code verified

[3979] Code ↔ Paper doi:10.21203/rs.3.rs-9188548/v1 [paper, repository]

Automated Longitudinal MRI Assessments of Diffuse Midline Gliomas: A Large Multi-Institutional Study

Journal: Research Square (preprint)

Authors' code: rauschecker-sugrue-labs/DMG-Longitudinal (MIT)

Status: code verified, 15 files readable, 6 matches

[3980] Code ↔ Paper doi:10.26508/lsa.202603749 [paper, repository]

Cross-species transcriptomic integration reveals a MIRO1-mediated macrophage-T cell axis in glioma.

Journal: Life science alliance

Authors' code: miroscape/MiroScape (no license)

Status: code verified, 25 files readable, 6 matches

[3981] doi:10.3389/fnagi.2026.1823372 [paper, data]

Stereoselective effects of nicotine enantiomers on the gut-brain axis and neuroinflammation in a mouse model of Parkinson's disease.

Journal: Frontiers in aging neuroscience

Status: data only, 1 dataset cited

[3982] Code ↔ Paper doi:10.3389/fncom.2026.1813959 [paper, repository]

Coherent-resonant netting: disorder-enhanced selectivity from transient wave-like dynamics on biological connectomes.

Journal: Frontiers in computational neuroscience

Authors' code: Zenodo 18338260 (MIT), ovdspb-code/crn_4.1 (MIT)

Status: code verified, 51 files readable, 16 matches

[3983] Code ↔ Paper doi:10.3389/fnut.2026.1837406 [paper, repository]

MIND diet moderates the associations between cerebrovascular and neurodegenerative disease burden and cognition.

Journal: Frontiers in nutrition

Authors' code: desdemps/VioScreen-MIND-scoring-R (no license)

Status: code verified, 3 files readable, 2 matches

[3984] doi:10.3389/fonc.2026.1742452 [paper, data]

SLC10A3 drives glioblastoma progression by remodeling the immunosuppressive microenvironment and promoting M2 macrophage migration.

Journal: Frontiers in oncology

Status: data only, 1 dataset cited

[3985] Code ↔ Paper doi:10.3390/bioengineering13050549 [paper, repository]

High-to-Low Spectral Mapping for Cross-System Feature Adaptation in Medical Hyperspectral Imaging.

Journal: Bioengineering (Basel, Switzerland)

Authors' code: git.iuma.ulpgc.es/stratum/public (no license)

Status: code verified

[3986] doi:10.3390/diagnostics16101478 [paper]

Autistic vs. Control Differences in MRI Scan Quality Across ABIDE-II Sites.

Journal: Diagnostics (Basel, Switzerland)

Status: code on request

[3987] Code ↔ Paper doi:10.34133/csbj.0085 [paper, repository]

A Systems-Level Transcriptomic Framework Identifies Shared Cellular Hubs in Osteoarthritis and Alzheimer's Disease.

Journal: Computational and structural biotechnology journal

Authors' code: znGer-cel/Sender-and-Receiver-Cellular-Hubs-as-Potential-Therapeutic-Targets-in-OA-AD-Comorbidity (no license)

Status: code verified, 4 files readable, 19 matches

[3988] Code ↔ Paper doi:10.7554/elife.106506 [paper, repository]

Modeling flexible behavior with remapping-based hippocampal sequence learning.

Journal: eLife

Authors' code: toppo365/flexiblemodel (MIT)

Status: code verified, 14 files readable

[3989] Code ↔ Paper doi:10.7554/elife.107423 [paper, repository]

A context-free model of savings in motor learning.

Journal: eLife

Authors' code: mshahbazi1997/MotorSavingModel (no license)

Status: code verified, 17 files readable, 3 matches

[3990] Code ↔ Paper doi:10.7554/elife.109842 [paper, repository]

Dissociable neural substrates of integration and segregation in exogenous attention.

Journal: eLife

Authors' code: OSF av4xn (no license), yangzhangpsy/ER-fMRI-IOR (GPL-3.0)

Status: code verified, 2 files readable

[3991] Code ↔ Paper doi:10.7554/elife.109888 [paper, repository]

Intravital calcium imaging of meningeal macrophages reveals niche-specific dynamics and aberrant responses to brain hyperexcitability.

Journal: eLife

Authors' code: levylabheadache/movieprocessing (GPL-3.0), levylabheadache/locomotion (GPL-3.0), levylabheadache/Aqua2Processing (GPL-3.0), levylabheadache/vasculature (no license), levylabheadache/GeneralLinearModel_Macrophages (GPL-3.0)

Status: code verified, 288 files readable, 20 matches

Tuesday, 12 May 2026 (44 papers, 41 on this page)

[3992] doi:10.1007/s00018-026-06235-9 [paper]

MicroRNA-29 acutely regulates memory stability, expression of synaptic genes, and DNA methylation in the mouse adult hippocampus.

Journal: Cellular and molecular life sciences : CMLS

Status: code on request

[3993] doi:10.1007/s10548-026-01214-6 [paper, data]

Operational Transformer: An investigation of epilepsy detection.

Journal: Brain topography

Status: data only, 1 dataset cited

[3994] doi:10.1016/j.bbih.2026.101253 [paper, data]

Inflammatory reprogramming of immature oligodendrocytes perturbs myelination and neurodevelopment in a dual-hit model of preterm brain injury.

Journal: Brain, behavior, & immunity - health

Status: data only, 1 dataset cited

[3995] Code ↔ Paper doi:10.1016/j.bpsgos.2026.100753 [paper, repository]

Dynamic Repertoire of Brain Networks in Mindfulness-Based Cognitive Therapy During Rumination: A Randomized Controlled Trial.

Journal: Biological psychiatry global open science

Authors' code: PSYMARKER/leida-matlab (MIT)

Status: code verified, 51 files readable, 4 matches

[3996] Code ↔ Paper doi:10.1016/j.ebiom.2026.106287 [paper, repository]

Thalamic interictal epileptic and non-epileptic events during NREM sleep in patients with focal epilepsy: a Stereo-EEG study.

Journal: EBioMedicine

Authors' code: Lab-Frauscher/Thalamus_Interictal (MIT)

Status: code verified, 7 files readable

[3997] Code ↔ Paper doi:10.1016/j.ebiom.2026.106293 [paper, repository]

Dynamic neural states underpin motor symptom severity in Parkinson's disease: a longitudinal analysis of chronic cortico-subthalamic nucleus recordings.

Journal: EBioMedicine

Authors' code: saltwater-tensor/PD-neural-dynamics-motor-states (AGPL-3.0)

Status: code verified, 14 files readable, 9 matches

[3998] doi:10.1016/j.redox.2026.104210 [paper, data]

Vespakinin-M delineates an AMPK/mTOR-arginine-TCA cycle axis to act as an immunometabolic switch in post-stroke microglia.

Journal: Redox biology

Status: data only, 1 dataset cited

[3999] Code ↔ Paper doi:10.1038/s41398-026-04073-8 [paper, repository]

Functional connectivity density alterations in obsessive-compulsive disorder are associated with neurotransmitter and genetic profiles.

Journal: Translational psychiatry

Authors' code: juryxy/juspace (no license)

Status: code verified, 21 files readable, 1 match

[4000] Code ↔ Paper doi:10.1038/s41467-026-71643-1 [paper, repository]

Pericytes are organ-specific regulators of tissue morphogenesis.

Journal: Nature communications

Authors' code: keeper.mpdl.mpg.de/d/301c44f11ccb455ab199 (no license), Bioinformatics-Service-MPI-Munster (no license)

Status: code verified

[4001] Code ↔ Paper doi:10.1038/s41467-026-72796-9 [paper, repository]

Local graph estimation with pathwise false discovery control.

Journal: Nature communications

Authors' code: omelikechi/localgraph-paper (MIT), omelikechi/localgraph (MIT), Zenodo 19655606 (MIT)

Status: code verified, 120 files readable, 19 matches

[4002] Code ↔ Paper doi:10.1038/s41467-026-72900-z [paper, repository]

Resistive memory-based neural differential equation solver for score-based diffusion model.

Journal: Nature communications

Authors' code: yangjc97/memristor-sde-diffusion (no license), Zenodo 19591013 (CC-BY-4.0)

Status: code verified, 212 files readable

[4003] doi:10.1038/s41467-026-72932-5 [paper, data]

Tumor-derived GDF15 induces CCN3⁺ Schwann cells to promote cancer pain in pancreatic cancer.

Journal: Nature communications

Status: data only, 1 dataset cited

[4004] Code ↔ Paper doi:10.1038/s41467-026-72935-2 [paper, repository]

Spindle neurons in human cortex possess distinctive firing properties and transcriptomic signatures.

Journal: Nature communications

Authors' code: OpenGene/fastp (MIT), Youshengshu/Human_VEN (no license)

Status: code verified, 92 files readable, 16 matches

[4005] doi:10.1038/s41467-026-72997-2 [paper, data]

Endothelial cell-secreted SPARC suppresses astrocytic CD59 expression and promotes astrocytopathy in a mouse model of neuromyelitis optica spectrum disorders.

Journal: Nature communications

Status: data only, 2 datasets cited

[4006] Code ↔ Paper doi:10.1038/s41467-026-73003-5 [paper, repository]

Gpnmb defines a phagocytic state of microglia linked to cell death in prion disease mouse model.

Journal: Nature communications

Authors' code: JEFworks-Lab/STdeconvolve (no license), dcare91/ST_prions (no license), Zenodo 18983911 (CC-BY-4.0)

Status: code verified, 23 files readable, 5 matches

[4007] doi:10.1038/s41531-026-01382-z [paper, data]

Preformed fibrils of α-synuclein rapidly activate LRRK2 on early endosomes, driving Rab5 phosphorylation and disrupting endolysosomal and synaptic function.

Journal: NPJ Parkinson's disease

Status: data only, 1 dataset cited

[4008] Code ↔ Paper doi:10.1038/s41562-026-02445-0 [paper, repository]

Human gloss perception reproduced by tiny neural networks.

Journal: Nature human behaviour

Authors' code: takuma929/gloss_tinynetworks (MIT), Hans1984/material-illumination-geometry (GPL-2.0), Zenodo 19511809 (MIT)

Status: code verified, 48 files readable, 19 matches

[4009] doi:10.1038/s41593-026-02292-2 [paper, data]

Individual differences in prosocial learning are represented in the hippocampal dorsal CA1.

Journal: Nature neuroscience

Status: code on request, 1 dataset cited

[4010] Code ↔ Paper doi:10.1038/s41593-026-02293-1 [paper, repository]

Optics-free spatial genomics for mapping mammalian brain aging by IRISeq.

Journal: Nature neuroscience

Authors' code: JunyueCaoLab/EasySci (MIT), AbdulAbdulRU/IRISeq (no license)

Status: code verified, 39 files readable, 9 matches

[4011] Code ↔ Paper doi:10.1038/s41597-026-07077-7 [paper, repository]

Everyday Activity Science and Engineering Table Setting Dataset.

Journal: Scientific data

Authors' code: gitlab.csl.uni-bremen.de/ease-public (no license), cognitive-systems-lab/easelan (MIT), gitlab.csl.uni-bremen.de/ease-public/tsd-one (no license), gitlab.csl.uni-bremen.de/ease-public/g.nautilus-driver (no license), gitlab.csl.uni-bremen.de/ease-public/lsl-tools (no license), gitlab.csl.uni-bremen.de/ease-public/labc (no license)

Status: code verified, 217 files readable, 9 matches

[4012] Code ↔ Paper doi:10.1038/s41598-026-47942-4 [paper, repository]

CT-based radiomic markers to predict late-onset seizures after traumatic brain injury.

Journal: Scientific reports

Authors' code: makchow/NIFTIProcessing-Published (no license)

Status: code verified, 4 files readable, 3 matches

[4013] doi:10.1038/s41598-026-51236-0 [paper, data]

A minimal-net CNN model for an IoT-based brain tumor detection and monitoring system.

Journal: Scientific reports

Status: data only, 3 datasets cited

[4014] doi:10.1038/s41598-026-51730-5 [paper, data]

Integrative bioinformatics analysis unveils neuro-cancer crosstalk-related genes and establishes prognostic risk model in Glioblastoma.

Journal: Scientific reports

Status: data only, 1 dataset cited

[4015] doi:10.1038/s41598-026-52750-x [paper, data]

NeuroNetFusion: enhanced EEG abnormality classification via multi-network TF-IDF feature selection.

Journal: Scientific reports

Status: data only, 1 dataset cited

[4016] Code ↔ Paper doi:10.1038/s41598-026-52754-7 [paper, repository]

Heroin addiction modulates transcription factor binding in regulatory regions of the human putamen.

Journal: Scientific reports

Authors' code: github.com.mcas.ms/gudalab/tf-regulatory-region-annotation (no license)

Status: code verified

[4017] doi:10.1038/s42003-026-10134-x [paper, data]

Early α-synuclein-mediated mitochondrial dysfunction in a human cell model of Parkinson's disease dementia.

Journal: Communications biology

Status: data only, 1 dataset cited

[4018] Code ↔ Paper doi:10.1038/s42003-026-10237-5 [paper, repository]

Shared subcortical-default mode morphological dysconnectivity in adolescent bipolar disorder, major depressive disorder and schizophrenia.

Journal: Communications biology

Authors' code: figshare 32049330 (CC-BY-4.0)

Status: code verified, 13 files readable, 3 matches

[4019] Code ↔ Paper doi:10.1073/pnas.2521055123 [paper, repository]

Empirical validation of race-neutral normative brain morphometry models across ethnoracially diverse populations.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: centilebrain/centilebrain (no license)

Status: code verified, 10 files readable, 2 matches

[4020] Code ↔ Paper doi:10.1088/1741-2552/ae5f4b [paper, repository]

logLIRA: a method for reliable suppression of electrical stimulation artifacts enabling short-latency neural response recovery.

Journal: Journal of neural engineering

Authors' code: barbaLab/logLIRA (no license), barbaLab/logLIRA-benchmark (no license)

Status: code verified, 45 files readable, 7 matches

[4021] doi:10.1186/s40364-026-00928-w [paper, data]

Tissue- and tumor-type-specific expression of internal-promoter-driven YEATS-domain-devoid isoforms of MLLT1 and MLLT3.

Journal: Biomarker research

Status: data only, 1 dataset cited

[4022] doi:10.1371/journal.pone.0348018 [paper, data]

Spatial coding of conspecifics in the electrosensory system: Early segregation of information streams.

Journal: PloS one

Status: data only, 1 dataset cited

[4023] Code ↔ Paper doi:10.3389/fcell.2026.1788958 [paper, repository]

3D Ultrastructural segmentation of human microvasculature reveals new insights in pericyte-endothelial cell interactions.

Journal: Frontiers in cell and developmental biology

Authors' code: timvanderleest/Vessel-Ultrastructure-Analysis (no license)

Status: code verified, 5 files readable, 1 match

[4024] doi:10.3389/fendo.2026.1819985 [paper, data]

Zinc oxide nanoparticles mitigate insulin resistance in a D-galactose-induced C57BL/6 mouse model.

Journal: Frontiers in endocrinology

Status: data only, 1 dataset cited

[4025] doi:10.3389/fimmu.2026.1792836 [paper, data]

Multi-omics investigation of perineural invasion in head and neck squamous cell carcinoma: neuroimmune mechanisms and clinical implications.

Journal: Frontiers in immunology

Status: data only, 1 dataset cited

[4026] Code ↔ Paper doi:10.3389/fnhum.2026.1791453 [paper, repository]

Differential role of beta band activity in a dual-task working memory paradigm under internally vs. externally directed cognition.

Journal: Frontiers in human neuroscience

Authors' code: drive.google.com/drive/u (no license)

Status: code verified

[4027] Code ↔ Paper doi:10.3389/fpsyg.2026.1654139 [paper, repository]

Whole-to-parts causation mechanism.

Journal: Frontiers in psychology

Authors' code: Yoshiyuki-Ohmura/DownwardCausation (no license)

Status: code verified, 17 files readable, 1 match

[4028] Code ↔ Paper doi:10.3389/fpsyt.2026.1752101 [paper, repository]

Case Report: Oral glutamatergic augmentation for trauma-related disorders with fluoxetine-/bupropion-potentiated dextromethorphan ± piracetam: a four-patient case series.

Journal: Frontiers in psychiatry

Authors' code: figshare 31405323 (CC-BY-4.0), Zenodo 17940803 (CC-BY-4.0), Zenodo 17940848 (CC-BY-4.0), Zenodo 17941467 (CC-BY-4.0), Zenodo 18006065 (CC-BY-4.0)

Status: empty repository

[4029] Code ↔ Paper doi:10.3389/fradi.2026.1785108 [paper, repository]

BT-CAP: a subcomponent-aware and anatomically constrained data augmentation framework for multi-modal brain tumor MRI segmentation.

Journal: Frontiers in radiology

Authors' code: dramintavallaii/BT-CAP (MIT)

Status: code verified, 15 files readable, 16 matches

[4030] doi:10.3390/ijms27104300 [paper, data]

A Synaptogenesis-Associated Histomorphologic Signature from H&E Whole-Slide Images Predicts Glioma Prognosis and Identifies <i>EFNB2</i>-Positive Malignant Cells as a Candidate Neuro-Glioma Communication Hub.

Journal: International journal of molecular sciences

Status: data only, 2 datasets cited

[4031] doi:10.3390/ijms27104325 [paper, data]

APOE4 Alters Early Transcriptional Programs and Inflammatory Signaling in Human Induced Pluripotent Stem Cells.

Journal: International journal of molecular sciences

Status: data only, 1 dataset cited

[4032] Code ↔ Paper doi:10.3390/s26103065 [paper, repository]

Subject-Wise Depression Screening from Eight-Channel Resting-State EEG Using Asymmetry-Aware Spectral Features and Connectivity Ablation.

Journal: Sensors (Basel, Switzerland)

Authors' code: ugail/EEG_Based_Depression_Screening (no license)

Status: code verified, 2 files readable, 10 matches

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