Every paper, by date: page 5

4,974 papers with a page: 2,882 with their authors' code, 597 with code on request, 1,495 with data only. The most recent first, 100 a page. Page 5 of 50: 27 August 2026 to 24 August 2026.

Thursday, 27 August 2026 (28 papers, 13 on this page)

[401] doi:10.1186/s12987-026-00865-8 [paper, data]

Brain parenchyma deformation and strain in patients with spontaneous intracranial hypotension.

Journal: Fluids and barriers of the CNS

Status: data only, 3 datasets cited

[402] doi:10.1186/s40035-026-00570-4 [paper, data]

HSPA8 orchestrates SNARE complex assembly to drive extracellular vesicle-mediated spread of p-tau217 in Alzheimer's disease.

Journal: Translational neurodegeneration

Status: data only, 1 dataset cited

[403] Code ↔ Paper doi:10.1212/wnl.0000000000218472 [paper, repository]

Lesion-Level Subtypes of White Matter Hyperintensity Evolution Beyond Spatial Location.

Journal: Neurology

Authors' code: rglezgz/WMH-subtypes (no license)

Status: code verified, 8 files readable, 9 matches

[404] Code ↔ Paper doi:10.1371/journal.pbio.3003938 [paper, repository]

Theta oscillations tag episodic memories for sleep-dependent consolidation.

Journal: PLoS biology

Authors' code: OSF tpwvb (no license), dandenis73/danalyzer (MIT)

Status: code verified, 106 files readable, 14 matches

[405] Code ↔ Paper doi:10.1371/journal.pbio.3003955 [paper, repository]

Beat- and Side-family cell-surface molecules are expressed combinatorially in the partner neurons of the olfactory circuit in Drosophila.

Journal: PLoS biology

Authors' code: volkanlab/beats_sides_olfactory_circuit_Drosophila_Duan_PlosBio2026 (MIT), Zenodo 21652764 (CC-BY-4.0)

Status: code verified, 18 files readable, 9 matches

[406] Code ↔ Paper doi:10.1371/journal.pcbi.1014653 [paper, repository]

Noisy models of the ventral stream reveal the impact of recurrence and learned representations on information processing timescales.

Journal: PLoS computational biology

Authors' code: Saravaretti/hierarchical-cnn-rnn (no license)

Status: code verified, 9 files readable, 1 match

[407] doi:10.1371/journal.pdig.0001598 [paper, data]

To learn or not to learn? Model-based estimation of motor learning in a large, "in the wild", home rehabilitation database.

Journal: PLOS digital health

Status: data only, 1 dataset cited

[408] Code ↔ Paper doi:10.1371/journal.pone.0355187 [paper, repository]

Improving corrosion depth estimation in buried pipelines using SMOTE-integrated machine and deep learning models.

Journal: PloS one

Authors' code: supp:PMC13521352/pone.0355187.s001.zip (no license)

Status: empty repository

[409] doi:10.21037/tcr-2026-0404 [paper, data]

A cuproptosis-related lncRNAs-based risk signature for predicting prognosis and immune status in glioma.

Journal: Translational cancer research

Status: data only, 1 dataset cited

[410] doi:10.2147/jpr.s624205 [paper]

Comparative Efficacy of Invasive and Non-Invasive Neuromodulation Techniques for Chronic Central and Peripheral Neuropathic Pain: A Systematic Review and Network Meta-Analysis.

Journal: Journal of pain research

Status: code on request

[411] doi:10.3389/fninf.2026.1902549 [paper, data]

Interpretable AI for neural signal decoding in dementia: an EEG ensemble approach to differential diagnosis.

Journal: Frontiers in neuroinformatics

Status: data only, 2 datasets cited

[412] doi:10.3390/diagnostics16172746 [paper]

Benchmarking Synolitic Graphs for Autism Classification from Multisite Resting-State fMRI.

Journal: Diagnostics (Basel, Switzerland)

Status: code on request

[413] doi:10.3390/ijms27177675 [paper, data]

LncRNA Gas5, a Target of the Nonsense-Mediated Decay Pathway in the Brain, Regulates Neuroinflammation and Neurodegenerative Disease Pathways in a Tauopathy Mouse Model.

Journal: International journal of molecular sciences

Status: data only, 1 dataset cited

Wednesday, 26 August 2026 (36 papers)

[414] doi:10.1007/s10916-026-02451-9 [paper, data]

Evaluation of MPEG-4 AAC Audio Codec Using EEG and EMG Signals for Use with DICOM® Neurophysiology.

Journal: Journal of medical systems

Status: data only, 1 dataset cited

[415] doi:10.1007/s12035-026-06133-y [paper, data]

Systematic Review and Transcriptomic Meta-analysis of Environmental Enrichment Reveal Core Molecular Programs of Brain Plasticity.

Journal: Molecular neurobiology

Status: data only, 1 dataset cited

[416] Code ↔ Paper doi:10.1016/j.isci.2026.117311 [paper, repository]

Thalamocortical network dynamics can explain visual impulse responses and perceptual echoes.

Journal: iScience

Authors' code: OSF 25axj (no license)

Status: code verified

[417] doi:10.1016/j.isci.2026.117332 [paper, data]

The <i>Sox2</i> regulatory region 42 produces enhancer RNAs that influence neuronal migration during cortical development.

Journal: iScience

Status: code on request, 1 dataset cited

[418] Code ↔ Paper doi:10.1016/j.isci.2026.117355 [paper, repository]

Transient gamma events delineate somatosensory modality in S1.

Journal: iScience

Authors' code: jonescompneurolab/SpectralEvents (BSD-3-Clause)

Status: code verified, 13 files readable, 3 matches

[419] doi:10.1016/j.neuroimage.2026.122186 [paper]

Aging, brain network connectivity, and cognition: evidence from resting-state dynamic arterial spin labeling.

Journal: NeuroImage

Status: code on request

[420] Code ↔ Paper doi:10.1016/j.nicl.2026.104052 [paper, repository]

Beyond one-to-one mappings: Modelling distributed lesion-symptom relationships with multilayer networks.

Journal: NeuroImage. Clinical

Authors' code: jdax34/scripts_article (no license)

Status: code verified, 11 files readable, 8 matches

[421] doi:10.1038/s41467-026-76468-6 [paper, data]

Cell autonomous regional differences in oligodendrocyte lineage development and responses to oncohistone H3.3 K27M.

Journal: Nature communications

Status: data only, 2 datasets cited

[422] Code ↔ Paper doi:10.1038/s41467-026-76927-0 [paper, repository]

State-dependent binding of the wedge domain controls inactivation of the mechanosensitive ion channel PIEZO1.

Journal: Nature communications

Authors' code: StefanLechnerUKE/PIEZO1_wedge_analysis (no license), Zenodo 21363175 (CC-BY-4.0)

Status: code verified, 28 files readable, 4 matches

[423] doi:10.1038/s41467-026-77103-0 [paper, data]

Human iPSC-cardiomyocyte-aggregate cell therapy in non-human primates and correlation of heart recovery with contractile and electrophysiological cardiomyocyte properties.

Journal: Nature communications

Status: data only, 1 dataset cited

[424] Code ↔ Paper doi:10.1093/braincomms/fcag322 [paper, repository]

Genomic insights into stroke recovery: cross-phenotype associations.

Journal: Brain communications

Authors' code: CMAldridge/Cross-Phenotype-GWAS (no license)

Status: code verified, 9 files readable, 3 matches

[425] Code ↔ Paper doi:10.1093/nc/niag044 [paper, repository]

Aquahenosis: a non-pharmacological altered state of consciousness induced by floatation-REST in individuals with anxiety and depression.

Journal: Neuroscience of consciousness

Authors' code: Institute-for-Advanced-Consciousness/Float (no license)

Status: code verified, 22 files readable, 8 matches

[426] doi:10.1126/sciadv.aed0049 [paper, data]

An axon-intrinsic loop restricts nerve regeneration through axonal protein synthesis.

Journal: Science advances

Status: data only, 1 dataset cited

[427] Code ↔ Paper doi:10.1126/sciadv.aed3650 [paper, repository]

Truthful visualizations for mass spectrometry imaging enable high-spatial-resolution interactive <i>m/z</i> mapping and exploration.

Journal: Science advances

Authors' code: Zenodo 19465293 (MIT)

Status: code verified, 96 files readable, 2 matches

[428] doi:10.1126/sciadv.aef3715 [paper, data]

A cortical output channel for perceptual categorization.

Journal: Science advances

Status: data only, 1 dataset cited

[429] doi:10.1155/da/2882097 [paper, data]

The Narrowing Self: Depressive Tendency Attenuates the Mother-Reference Effect.

Journal: Depression and anxiety

Status: data only, 1 dataset cited

[430] Code ↔ Paper doi:10.1162/imag.a.1347 [paper, repository]

Neural and behavioural correlates of theory of mind reasoning in five-year-old children born preterm.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: hrichardsonlab/fmri-analysis (no license), OSF xtyu8 (no license)

Status: code verified, 49 files readable, 12 matches

[431] Code ↔ Paper doi:10.1177/0271678x261485404 [paper, repository]

The microdialysis-derived lactate-pyruvate gradient indicates anaerobic activity after brain injury.

Journal: Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism

Authors' code: msb-jr/LPG (MIT)

Status: code verified, 18 files readable, 15 matches

[432] doi:10.1186/s42492-026-00230-4 [paper, data]

Hierarchical two-stage ensemble of dilated U-net models for brain tumor segmentation.

Journal: Visual computing for industry, biomedicine, and art

Status: data only, 1 dataset cited

[433] doi:10.1186/s43556-026-00546-w [paper, data]

Silencing arachidonate 15-lipoxygenase alleviates hypoxia-induced cognitive impairment through the mediation of phospholipase A2 group IVC-LPC18:0 to suppress ferroptosis.

Journal: Molecular biomedicine

Status: data only, 1 dataset cited

[434] Code ↔ Paper doi:10.1212/wnl.0000000000218519 [paper, repository]

EOAD-Signature Atrophy Predicts Dementia in Early-Onset MCI due to Alzheimer Disease: An MRI-Based Prognostic Biomarker.

Journal: Neurology

Authors' code: thiagoparanhos/EOAD-prognostication (no license)

Status: code verified, 6 files readable, 3 matches

[435] Code ↔ Paper doi:10.1371/journal.pbio.3003953 [paper, repository]

Dynamic Landscape Analysis of cell fate decisions provides predictive models of neural development from single-cell data.

Journal: PLoS biology

Authors' code: Zenodo 15584010 (CC-BY-4.0), MarineAFontaine/Dynamic-Landscape-Analysis-DLA- (no license)

Status: code verified, 7 files readable, 1 match

[436] Code ↔ Paper doi:10.1371/journal.pbio.3003966 [paper, repository]

Behavioral engagement and stimulus regularities coordinate auditory-prefrontal network activity.

Journal: PLoS biology

Authors' code: Zenodo 21768371 (MIT), TOMORI233/MonkeyNovelty (MIT)

Status: code verified, 144 files readable, 18 matches

[437] Code ↔ Paper doi:10.1371/journal.pcbi.1014673 [paper, repository]

Modeling the influences of non-local connectomic projections on geometrically constrained cortical dynamics.

Journal: PLoS computational biology

Authors' code: DynamicsAndNeuralSystems/geometricFNPmodel (GPL-3.0)

Status: code verified, 28 files readable, 3 matches

[438] doi:10.1371/journal.pone.0356781 [paper, data]

Bovine serum albumin sensitizes the mouse brain to lipopolysaccharides.

Journal: PloS one

Status: data only, 4 datasets cited

[439] doi:10.2147/nss.s618511 [paper, data]

Associations Between Obstructive Sleep Apnea, Macro-Scale Glymphatic Coupling, and Episodic Memory Impairment in Middle-Aged and Older Adults.

Journal: Nature and science of sleep

Status: data only, 1 dataset cited

[440] doi:10.3389/fcimb.2026.1806356 [paper, data]

Global research trends in enteric nervous system and gut microbiota: a bibliometric analysis (2005-2025).

Journal: Frontiers in cellular and infection microbiology

Status: data only, 1 dataset cited

[441] doi:10.3389/fimmu.2026.1805464 [paper, data]

Chronic low-grade inflammation, genetic susceptibility, and the risk of multiple sclerosis: a prospective cohort study.

Journal: Frontiers in immunology

Status: data only, 1 dataset cited

[442] doi:10.3389/fimmu.2026.1937738 [paper, data]

Multi-regional transcriptomic analysis reveals early nociceptive and neuroinflammatory alterations in APP/PS1 mice.

Journal: Frontiers in immunology

Status: data only, 2 datasets cited

[443] doi:10.3389/fncel.2026.1908231 [paper, data]

Integrative transcriptomic- neuroimaging analysis reveals polygenic correlates of interhemispheric functional decoupling in ischemic stroke.

Journal: Frontiers in cellular neuroscience

Status: data only, 1 dataset cited

[444] Code ↔ Paper doi:10.3389/fncom.2026.1862383 [paper, repository]

Microstructural spine alterations increase neuronal excitability in focal cortical dysplasia Type I.

Journal: Frontiers in computational neuroscience

Authors' code: jawonGim/Simulation_SpineAlterationFocalCorticalDysplasia (CC-BY-NC-4.0)

Status: code verified, 19 files readable, 3 matches

[445] Code ↔ Paper doi:10.3389/fped.2026.1912111 [paper, repository]

Serial amplitude-integrated electroencephalography trajectories and brain-injury-associated functional immaturity in extremely preterm infants.

Journal: Frontiers in pediatrics

Authors' code: MdXuDeKai/AEEG (MIT)

Status: empty repository, 1 file readable

[446] Code ↔ Paper doi:10.3390/s26175388 [paper, repository]

Self-Supervised Stacked Masked Denoising Autoencoder (S<sup>2</sup>MDAE) for Brain MRI Denoising and Feature Learning.

Journal: Sensors (Basel, Switzerland)

Authors' code: limou66/S2MDAE (no license)

Status: code verified, 5 files readable, 5 matches

[447] Code ↔ Paper doi:10.7554/elife.105953 [paper, repository]

Top-down feedback in deep neural networks leads to functional differences during audiovisual integration.

Journal: eLife

Authors' code: masht18/connectome-to-model (MIT), ABL-Lab/ambiguous-dataset (Apache-2.0)

Status: code verified, 45 files readable, 5 matches

[448] Code ↔ Paper doi:10.7554/elife.108673 [paper, repository]

Adaptive behavior is guided by integrated representations of controlled and non-controlled information.

Journal: eLife

Authors' code: OSF tzcn8 (no license)

Status: code verified, 6 files readable, 2 matches

[449] Code ↔ Paper doi:10.7554/elife.111179 [paper, repository]

Perceiving animacy in 'identical' images.

Journal: eLife

Authors' code: OSF rw8tu (no license)

Status: code verified, 1 file readable

Tuesday, 25 August 2026 (23 papers)

[450] doi:10.1007/s12035-026-06155-6 [paper, data]

Sigma-1 Expression in Chronic Mouse Models of Temporal Lobe Epilepsy.

Journal: Molecular neurobiology

Status: data only, 1 dataset cited

[451] Code ↔ Paper doi:10.1016/j.isci.2026.117184 [paper, repository]

Symmetric sensing and symmetry-breaking processing as a minimal principle for directional inference.

Journal: iScience

Authors' code: Zenodo 19648083 (CC-BY-4.0), nobuchika-yamaki/symmetric-sensing-and-symmetry-breaking- (no license)

Status: code verified, 8 files readable, 8 matches

[452] Code ↔ Paper doi:10.1016/j.isci.2026.117285 [paper, repository]

Working memory demands modulate memory brain state engagement.

Journal: iScience

Authors' code: OSF m6knv (no license), longtermmemorylab.com/papers (no license)

Status: code verified, 26 files readable, 11 matches

[453] Code ↔ Paper doi:10.1016/j.isci.2026.117309 [paper, repository]

Intracellular regulation of a serotonin-gated ion channel links receptor trafficking to memory.

Journal: iScience

Authors' code: slowkow/ggrepel (GPL-3.0)

Status: code verified, 37 files readable

[454] doi:10.1016/j.isci.2026.117335 [paper, data]

Coincidence of L1 retrotransposition and DNA repair deficiency elicits synthetic lethality in S-phase mature neurons.

Journal: iScience

Status: code on request, 1 dataset cited

[455] Code ↔ Paper doi:10.1016/j.xpro.2026.104787 [paper, repository]

Protocol for 3D digital dynamic histomorphometry of mouse bone via time-lapse registration of serial microCT scans.

Journal: STAR protocols

Authors' code: QMuentin/3D-digital-dynamic-histomorphometry (MIT), Zenodo 19225261 (MIT)

Status: code verified, 8 files readable, 4 matches

[456] Code ↔ Paper doi:10.1038/s41467-026-76929-y [paper, repository]

Next-generation multiplexed targeted proteomics quantifies post-translational modifications in disease and compound-protein interactions with high throughput.

Journal: Nature communications

Authors' code: thermofisherlsms/iapi (MIT), uwpr.github.io/comet (no license)

Status: code verified, 13 files readable

[457] doi:10.1038/s41598-026-49678-7 [paper]

Clinical validation pipeline of a deep learning model for segmenting and quantifying intracranial and ventricular volumes on computed tomography.

Journal: Scientific reports

Status: code on request

[458] doi:10.1073/pnas.2614164123 [paper, data]

Loss of neuronal population organization links pathology to behavior in a model of Alzheimer's disease.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Status: data only, 1 dataset cited

[459] Code ↔ Paper doi:10.1162/netn.a.572 [paper, repository]

Functional connectivity is linked to symbolic BOLD patterns: Replication, extension, and clinical application of the human "Complexome".

Journal: Network neuroscience (Cambridge, Mass.)

Authors' code: OSF mr8f7 (no license), OSF wjua7 (no license)

Status: code verified, 14 files readable, 12 matches

[460] Code ↔ Paper doi:10.1162/netn.a.575 [paper, repository]

Parallel multilink group joint ICA (pmg-jICA): Fusion of 3D structural and 4D functional data across multiple resting fMRI networks.

Journal: Network neuroscience (Cambridge, Mass.)

Authors' code: trendscenter/fit (no license)

Status: code verified, 587 files readable, 2 matches

[461] doi:10.1162/netn.a.586 [paper, data]

Effects of light on brain-state dynamics and energy landscape.

Journal: Network neuroscience (Cambridge, Mass.)

Status: data only, 1 dataset cited

[462] Code ↔ Paper doi:10.1371/journal.pbio.3003960 [paper, repository]

Brachyury expression levels predict lineage potential and axis-forming ability of in vitro-derived neuromesodermal progenitors.

Journal: PLoS biology

Authors' code: Zenodo 21650680 (BSD-3-Clause), Zenodo 21676159 (MIT), Zenodo 15802710 (MIT), Zenodo 17192095 (MIT), Zenodo 17154933 (BSD-3-Clause), mattfrenchh/pringle (MIT), albertoceccarelli/brachyury-expression-levels-predict-lineage-potential (BSD-3-Clause), mattfrenchh/binagui-casas_granes_et.al._2026_fig4_6_s5_s6 (MIT)

Status: code verified, 43 files readable, 5 matches

[463] Code ↔ Paper doi:10.1371/journal.pcbi.1014532 [paper, repository]

High reelin expression may explain why a subgroup of entorhinal cortex neurons functions as an initial nucleation site of Alzheimer's disease.

Journal: PLoS computational biology

Authors' code: Zenodo 15680979 (CC-BY-4.0)

Status: code verified, 19 files readable

[464] Code ↔ Paper doi:10.1371/journal.pcbi.1014719 [paper, repository]

Manifold-constrained plasticity enables stable learning in recurrent neural circuits.

Journal: PLoS computational biology

Authors' code: supp:PMC13529248/pcbi.1014719.s002.zip (no license)

Status: code verified, 10 files readable, 5 matches

[465] Code ↔ Paper doi:10.1371/journal.pmed.1005182 [paper, repository]

Frequency and prognostic outcomes of emergency diagnosis in 13 non-neoplastic conditions in England: A population-based cohort study using linked electronic health records of 1.7 million patients.

Journal: PLoS medicine

Authors' code: Zenodo 13710755 (CC-BY-4.0), Zenodo 16840511 (MIT), ekw26/atlas-phenotypes (MIT), ekw26/atlas-emergencies (MIT)

Status: code verified, 22 files readable, 7 matches

[466] doi:10.2147/dddt.s627186 [paper, data]

Esketamine Attenuates Postoperative Neurocognitive Disorder in Aged Mice: Associations with Bioenergetic Remodeling in Hippocampal CD11b-Enriched Cell Fractions and Glycolysis-Related Signaling.

Journal: Drug design, development and therapy

Status: data only, 1 dataset cited

[467] Code ↔ Paper doi:10.2196/84707 [paper, repository]

Wireless Electroencephalography in Research on Children With Developmental Disabilities: Scoping Review.

Journal: Journal of medical Internet research

Authors' code: Zenodo 21633946 (CC-BY-4.0)

Status: code verified

[468] Code ↔ Paper doi:10.3389/fneur.2026.1812084 [paper, repository]

Prognostic assessment of comatose patients after cardiac arrest: construction of a simplified monitoring EEG risk score across different time windows.

Journal: Frontiers in neurology

Authors' code: ShengYH2001/Simplified-EEG-Risk-Score (MIT)

Status: empty repository, 1 file readable

[469] Code ↔ Paper doi:10.3389/fnins.2026.1893619 [paper, repository]

Direct laser carbonization of parylene-C toward microelectrodes for <i>in vivo</i> action potential detection.

Journal: Frontiers in neuroscience

Authors' code: virgil-castillo/laser-carbonized-parylene-C-microelectrodes (no license)

Status: code verified, 48 files readable, 5 matches

[470] doi:10.3389/fnmol.2026.1844343 [paper, data]

Molecular abnormalities scale across three models of cerebral injury.

Journal: Frontiers in molecular neuroscience

Status: data only, 2 datasets cited

[471] doi:10.3389/fped.2026.1891438 [paper, data]

Identification and clinical validation of F3 as a peripheral blood biomarker for neonatal hypoxic-ischemic encephalopathy using dataset-specific bioinformatics analysis.

Journal: Frontiers in pediatrics

Status: data only, 1 dataset cited

[472] doi:10.3389/fpsyt.2026.1825054 [paper]

Altered functional connectivity of nucleus accumbens in patients with persistent postural-perceptual dizziness: a resting-state functional magnetic resonance imaging study.

Journal: Frontiers in psychiatry

Status: code on request

Monday, 24 August 2026 (30 papers, 28 on this page)

[473] doi:10.1002/ame2.70277 [paper]

A rhesus macaque model of α-dystroglycanopathy caused by a POMT1 splice altering variant.

Journal: Animal models and experimental medicine

Status: data only

[474] doi:10.1002/lio2.70519 [paper, data]

Large Language Models for Optimizing Patient Recruitment Decisions in Voice Data Generation Projects.

Journal: Laryngoscope investigative otolaryngology

Status: data only, 1 dataset cited

[475] doi:10.1007/s00221-026-07365-z [paper, data]

Effects of augmented feedback delay on neural correlates of feedback processing in motor practice.

Journal: Experimental brain research

Status: data only, 1 dataset cited

[476] Code ↔ Paper doi:10.1007/s11682-026-01191-1 [paper, repository]

Enhancing reproducibility in neuroimaging with containerized archival.

Journal: Brain imaging and behavior

Authors' code: Zenodo 14593034 (CC-BY-4.0), Zenodo 14586026 (CC-BY-4.0), Zenodo 14618566 (CC-BY-4.0)

Status: code verified

[477] doi:10.1007/s12035-026-06127-w [paper, data]

Disrupting fzd9b in Zebrafish Recapitulates Stress- and Anxiety-Like Behaviours Relevant to Williams Syndrome.

Journal: Molecular neurobiology

Status: data only, 1 dataset cited

[478] doi:10.1016/j.isci.2026.117250 [paper]

Comparative effectiveness of multiple interventions for Alzheimer's disease on ABC syndromes and QoL: A Bayesian network meta-analysis.

Journal: iScience

Status: code on request

[479] doi:10.1016/j.isci.2026.117267 [paper, data]

Phospholipase D2 acts upstream of PI4P 5-kinases in the response of neurons to extracellular viscosity.

Journal: iScience

Status: code on request, 1 dataset cited

[480] doi:10.1016/j.isci.2026.117318 [paper]

Dynamic interactions with neuroblasts promote oligodendrocyte progenitor migration to injured cortex.

Journal: iScience

Status: code on request

[481] Code ↔ Paper doi:10.1016/j.isci.2026.117346 [paper, repository]

Spatial transcriptomics of <i>Ciona</i> adult brains reveals functional zonalization and insights into neural gland function.

Journal: iScience

Authors' code: figshare 31915545 (CC-BY-4.0), xzengComBio/Ciona_ST (no license)

Status: code verified, 12 files readable, 5 matches

[482] Code ↔ Paper doi:10.1016/j.xpro.2026.104801 [paper, repository]

Protocol to characterize tumor microenvironment in a diffuse midline glioma mouse model using multi-omics approach on sequential sections.

Journal: STAR protocols

Authors' code: conda-forge/miniforge (BSD-3-Clause), Zenodo 21513336 (MIT)

Status: code verified, 14 files readable

[483] doi:10.1038/s41467-026-76598-x [paper, data]

Preserved topography, lateralization, selectivity, and functional connectivity of the language network in older brains.

Journal: Nature communications

Status: data only, 1 dataset cited

[484] Code ↔ Paper doi:10.1038/s41592-026-03194-8 [paper, repository]

Beyond benchmarking: an expert-guided consensus approach to spatially aware clustering.

Journal: Nature methods

Authors' code: SpatialHackathon/SACCELERATOR (MIT), SpatialHackathon/SpaceHack2023_study (MIT), Zenodo 15487520 (CC-BY-4.0)

Status: code verified, 129 files readable, 20 matches

[485] doi:10.1038/s41598-026-60525-7 [paper, data]

Superfast prediction of brain tumours through adaptive incremental pre-training and re-training through transfer learning using state-of-the-art ResNet18 architectural model.

Journal: Scientific reports

Status: data only, 1 dataset cited

[486] Code ↔ Paper doi:10.1073/pnas.2613593123 [paper, repository]

Calbindin stratifies midbrain dopaminergic neurons governing distinct aspects of locomotion.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: poulin-lab/Bolduc-et-al-2026_Calb1-paper (no license)

Status: code verified, 38 files readable, 6 matches

[487] Code ↔ Paper doi:10.1093/pnasnexus/pgag285 [paper, repository]

Neural integrator and orchestrator communities shape spontaneous signaling in the human brain.

Journal: PNAS nexus

Authors' code: ranieridugo/mfou_bio (no license)

Status: code verified, 12 files readable, 2 matches

[488] Code ↔ Paper doi:10.1162/imag.a.1338 [paper, repository]

Systematic fMRI signal differences across cohorts alter lifespan trajectories of functional brain networks.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: andy1764/CovBat_Harmonization (no license), mychan24/system-segregation-and-graph-tools (MIT)

Status: code verified, 27 files readable, 2 matches

[489] Code ↔ Paper doi:10.1371/journal.pcbi.1014706 [paper, repository]

Double shrinkage transfer causal learning: An application to alzheimer's disease.

Journal: PLoS computational biology

Authors' code: LESWinnie/DSTCL (no license)

Status: code verified, 5 files readable, 5 matches

[490] Code ↔ Paper doi:10.1371/journal.pone.0344932 [paper, repository]

Cryopreservation of aldehyde-fixed whole brains.

Journal: PloS one

Authors' code: andymckenzie/Aldehyde_based_cryopreservation (no license)

Status: code verified, 1 file readable, 2 matches

[491] Code ↔ Paper doi:10.1371/journal.pone.0354510 [paper, repository]

Personalized adaptive virtual reality experience driven by electroencephalography-based pain recognition.

Journal: PloS one

Authors' code: Zenodo 20846022 (CC-BY-4.0), sabrinamkb/eeg-vr-pain-adaptation (no license)

Status: code verified, 6 files readable, 12 matches

[492] doi:10.1371/journal.pone.0355984 [paper]

An integrated systems biology and machine learning framework for identifying potential biomarkers and pathways in autism spectrum disorder.

Journal: PloS one

Status: data only

[493] Code ↔ Paper doi:10.1523/eneuro.0121-26.2026 [paper, repository]

Hippocampal Gene Expression in Zebra Finches Reveals Sex- and Subregion-Specific Topographies.

Journal: eNeuro

Authors' code: ATayl4908/ZB-DGE-analysis (no license)

Status: dead link

[494] Code ↔ Paper doi:10.1523/eneuro.0362-25.2026 [paper, repository]

Similarities between <i>Ciona</i> Dorsal Motor Ganglion and Vertebrate Cerebellum: Did a Chordate Ancestor Already Show D/V Subdivision within a Hindbrain Precursor?

Journal: eNeuro

Authors' code: scverse/scvi-tools (BSD-3-Clause)

Status: code verified, 345 files readable, 1 match

[495] Code ↔ Paper doi:10.1523/eneuro.0370-25.2026 [paper, repository]

Pretraining for Large-Scale Functional Connectome Fingerprinting Supports Generalization and Transfer Learning in Functional Neuroimaging.

Journal: eNeuro

Authors' code: OSF wfdkx (no license)

Status: code verified, 2 files readable, 5 matches

[496] Code ↔ Paper doi:10.1523/eneuro.0379-25.2026 [paper, repository]

Next-Generation Neural Mass Models Reproduce Features of Speech Processing.

Journal: eNeuro

Authors' code: Modelling-Speech-Processing/Shannon_et_al (MIT)

Status: code verified, 21 files readable, 21 matches

[497] doi:10.3389/fncom.2026.1844662 [paper, data]

Quantifying cortex-wide traveling brain waves of complex patterns with a graph-based algorithm.

Journal: Frontiers in computational neuroscience

Status: data only, 1 dataset cited

[498] doi:10.3389/fonc.2026.1927290 [paper, data]

Arylsulfatase D promotes malignant phenotypes in glioblastoma cells and is linked to altered Hippo pathway phosphorylation.

Journal: Frontiers in oncology

Status: data only, 1 dataset cited

[499] doi:10.3390/biology15171446 [paper, data]

Chronic Stress Induces Retinal Ganglion Cell Degeneration Featuring Reduced Density, Altered Intrinsic Electrophysiology, and Light Responses.

Journal: Biology

Status: data only, 1 dataset cited

[500] Code ↔ Paper doi:10.34133/research.1392 [paper, repository]

Neuroimaging Epicenters as Vulnerable Nodes in Plasma p-tau217/Aβ42-Positive Alzheimer's Disease.

Journal: Research (Washington, D.C.)

Authors' code: Jiamingglyy/neuroepicenter-gof (MIT)

Status: code verified, 25 files readable

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