Every paper, by date: page 24

44,644 papers with a page: 24,189 with their authors' code, 4,955 with code on request, 15,495 with data only. The most recent first, 224 a page. Page 24 of 200: 10 April 2026 to 3 April 2026.

Friday, 10 April 2026 (50 papers, 26 on this page)

[5153] Code ↔ Paper doi:10.1038/s42003-025-09444-3 [paper, repository]

Decoupling of neurophysiological activity from structure mirrors global microarchitectural and neuromodulatory trends.

Journal: Communications biology

Authors' code: netneurolab/netneurotools (BSD-3-Clause), rmarkello/abagen (BSD-3-Clause), yaqiany/scfccoupling-high (no license)

Status: code verified, 148 files readable, 7 matches

[5154] doi:10.1038/s42003-026-09931-1 [paper, data]

Elovanoid neuroprotection targets cell transcriptomics and proteomics to sustain synaptic integrity after brain injury.

Journal: Communications biology

Status: code on request, 1 dataset cited

[5155] Code ↔ Paper doi:10.1038/s44318-026-00768-2 [paper, repository]

The H3K36me3 methyltransferase SETD2 contributes to PAF1C interactions with RNA Pol II and is required for neuronal differentiation.

Journal: The EMBO journal

Authors' code: FelixKrueger/TrimGalore (GPL-3.0), BaubecLab/Setd2 (no license)

Status: code verified, 37 files readable, 5 matches

[5156] doi:10.1038/s44319-026-00769-6 [paper]

Senescence-like cells recruit γδ T cells to drive prolonged hyposmia after SARS-CoV-2 infection in mice.

Journal: EMBO reports

Status: data only

[5157] doi:10.1080/21505594.2026.2654261 [paper, data]

<i>Toxoplasma gondii</i> effector GRA35 mediates neuronal damage <i>via</i> ER stress and mitochondria-associated apoptosis.

Journal: Virulence

Status: data only, 2 datasets cited

[5158] doi:10.1093/braincomms/fcag128 [paper, data]

EEG-motor correlation as early Alzheimer's disease index in herpes simplex virus type-1-infected mice.

Journal: Brain communications

Status: data only, 1 dataset cited

[5159] Code ↔ Paper doi:10.1093/psyrad/kkag015 [paper, repository]

Neurocomputational mechanisms of reward-based online mood regulation in adolescents with bipolar disorder and major depressive disorder.

Journal: Psychoradiology

Authors' code: GITSyfX/CCNN-23BPhappy (GPL-3.0)

Status: code verified, 66 files readable, 3 matches

[5160] doi:10.1126/sciadv.adz7708 [paper, data]

Miniaturized optically generated Bessel beam ultrasound for volumetric transcranial brain stimulation.

Journal: Science advances

Status: data only, 1 dataset cited

[5161] Code ↔ Paper doi:10.1126/sciadv.aeb5842 [paper, repository]

Regulation of autism-related self-injurious behavior by electrical stimulation of corticostriatal circuits in mice and humans.

Journal: Science advances

Authors' code: lead-dbs.org (no license), CoBrALab/twolevel_ants_dbm (other), CoBrALab/optimized_antsMultivariateTemplateConstruction (other)

Status: code verified, 19 files readable, 2 matches

[5162] doi:10.1159/000551973 [paper, data]

Age-Related Associations between Reactive-Balance Stepping Responses, Self-Induced Stepping, and Gray-Matter Volume.

Journal: Gerontology

Status: data only, 1 dataset cited

[5163] doi:10.1162/imag.a.1202 [paper]

Recurring transient brain-wide co-activation patterns from EEG spatially resembling time-averaged resting-state networks.

Journal: Imaging neuroscience (Cambridge, Mass.)

Status: code on request

[5164] doi:10.1186/s11689-026-09692-2 [paper, data]

Altered folate metabolism disrupts auditory function from neonatal vocalizations to adult perceptual precision.

Journal: Journal of neurodevelopmental disorders

Status: data only, 2 datasets cited

[5165] doi:10.1186/s12974-026-03761-y [paper, data]

Clostridium butyricum ameliorates Toxoplasma gondii-induced neuropsychiatric disorders by attenuating glial-mediated synaptic pruning via the gut-brain axis.

Journal: Journal of neuroinflammation

Status: data only, 1 dataset cited

[5166] Code ↔ Paper doi:10.1371/journal.pcbi.1013252 [paper, repository]

Dynamic cholinergic signaling differentially desynchronizes cortical microcircuits dependent on modulation rate and network connectivity.

Journal: PLoS computational biology

Authors' code: RichLabUConn/DynamicACh (GPL-3.0), Zenodo 15641814 (GPL-3.0)

Status: code verified, 26 files readable, 5 matches

[5167] doi:10.1371/journal.pntd.0014212 [paper, data]

Diagnosis and therapeutic outcomes of biopsy-confirmed Pure Neuritic Leprosy: A two-decade experience.

Journal: PLoS neglected tropical diseases

Status: data only, 1 dataset cited

[5168] doi:10.1371/journal.pone.0345793 [paper, data]

Evaluation of long-range temporal correlations during overt and covert attention in a steady state visual evoked potential based brain-computer interface.

Journal: PloS one

Status: data only, 1 dataset cited

[5169] Code ↔ Paper doi:10.17912/micropub.biology.001796 [paper, repository]

gPPIpred: A User-Friendly PPI Predictor Based on Protein Molecular Graphs.

Journal: microPublication biology

Authors' code: huggingface.co/spaces/1143joana/gppipredv2_2 (no license)

Status: code verified, 6 files readable, 4 matches

[5170] Code ↔ Paper doi:10.3389/fncom.2026.1761735 [paper, repository]

Adaptation modulates effective connectivity and network stability.

Journal: Frontiers in computational neuroscience

Authors' code: TomRichner/ConnectivityAdaptation (MIT)

Status: code verified, 60 files readable, 8 matches

[5171] Code ↔ Paper doi:10.3389/fnetp.2026.1784539 [paper, repository]

The amplitude-amplitude cross-frequency coupling method: a step-by-step guide to quantifying physiological network interactions.

Journal: Frontiers in network physiology

Authors' code: luphysics/MODA (GPL-3.0)

Status: code verified, 72 files readable, 1 match

[5172] doi:10.3389/fphar.2026.1792674 [paper, data]

Enhanced therapeutic potential of paeoniflorin and vitamin B12 in intracerebropeduncle ethidium bromide-induced multiple sclerosis-like pathology.

Journal: Frontiers in pharmacology

Status: data only, 6 datasets cited

[5173] doi:10.3390/brainsci16040405 [paper, data]

Benchmarking Multimodal Deep Fusion Strategies for Heterogeneous Neuroimaging and Cognitive Data Using a Controlled Sex Classification Task.

Journal: Brain sciences

Status: code on request, 1 dataset cited

[5174] doi:10.3390/jimaging12040165 [paper, data]

Probabilistic Short-Term Sky Image Forecasting Using VQ-VAE and Transformer Models on Sky Camera Data.

Journal: Journal of imaging

Status: data only, 1 dataset cited

[5175] doi:10.3390/nu18081200 [paper, data]

Neurological Effects of <i>Cleistocalyx nervosum</i> var. <i>paniala</i> Berry on Hippocampal Transcriptome, Neuritogenesis, and Synaptogenesis.

Journal: Nutrients

Status: data only, 1 dataset cited

[5176] doi:10.7554/elife.100451 [paper, data]

Translational control in the spinal cord regulates gene expression and pain hypersensitivity in the chronic phase of neuropathic pain.

Journal: eLife

Status: data only, 1 dataset cited

[5177] Code ↔ Paper doi:10.7554/elife.105482 [paper, repository]

Principles of gamma synchrony predict figure-ground perception in texture stimuli.

Journal: eLife

Authors' code: ccnmaastricht/TextureStimuli-FigureGround (MIT), ccnmaastricht/NeuralSynchrony-FigureGround (MIT)

Status: code verified, 41 files readable, 16 matches

[5178] Code ↔ Paper doi:10.7554/elife.106543 [paper, repository]

Stimulus dependencies-rather than next-word prediction-can explain pre-onset brain encoding in naturalistic listening designs.

Journal: eLife

Authors' code: InesSchoenmann/Lingpred (MIT)

Status: code verified, 20 files readable, 3 matches

Thursday, 9 April 2026 (50 papers)

[5179] Code ↔ Paper doi:10.1002/advs.202520773 [paper, repository]

Mild Focal Cooling Decouples Dendrites to Reconfigure Cortical Output.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Authors' code: shulanx1/simpl5pn_temperature_modulation (no license), Zenodo 14020643 (CC-BY-4.0)

Status: code verified, 35 files readable, 2 matches

[5180] doi:10.1007/s00285-026-02386-2 [paper]

A multiscale theory for network advection- reaction-diffusion.

Journal: Journal of mathematical biology

Status: code on request

[5181] doi:10.1007/s10439-026-04093-x [paper, data]

MEG Neural Decoding Pipeline: The Issues Residing Within The Data and Methods to Improve Your Decoding Accuracy.

Journal: Annals of biomedical engineering

Status: data only, 2 datasets cited

[5182] doi:10.1016/j.celrep.2026.117255 [paper]

The atypical adhesion GPCR ADGRA1 controls hippocampal inhibitory circuit function.

Journal: Cell reports

Status: code on request

[5183] Code ↔ Paper doi:10.1016/j.cub.2026.03.031 [paper, repository]

Acute requirement for the hippocampus in putatively conscious vision revealed by a mouse model of blindsight.

Journal: Current biology : CB

Authors' code: nbhatla/micevr (no license), allensdk.readthedocs.io (no license)

Status: code verified, 1 file readable

[5184] doi:10.1016/j.isci.2026.115565 [paper, data]

Neuromuscular junction innervation and motor function are preserved by restoring muscarinic signaling in perisynaptic glia in ALS.

Journal: iScience

Status: code on request, 5 datasets cited

[5185] doi:10.1016/j.isci.2026.115687 [paper]

Wasteosomes (corpora amylacea) of the human brain accumulate in CD44-positive astrocytes.

Journal: iScience

Status: code on request

[5186] Code ↔ Paper doi:10.1016/j.isci.2026.115689 [paper, repository]

Unperturbed dye-based imaging of spontaneous synchronized calcium activity in iPSC-derived neuronal cultures.

Journal: iScience

Authors' code: stardist/stardist (BSD-3-Clause), DeVosLab/NeuroConnectivity (CC-BY-NC-SA-4.0)

Status: code verified, 64 files readable, 2 matches

[5187] doi:10.1016/j.neuroimage.2026.121920 [paper]

Test-retest reliability of FreeSurfer measures of neurodegeneration.

Journal: NeuroImage

Status: code on request

[5188] doi:10.1038/s41467-026-71021-x [paper, data]

Developing a multimodal therapy for glioblastoma using oncolytic virus delivering CD19 and EGFRvIII antigens and bi-specific CARs.

Journal: Nature communications

Status: data only, 1 dataset cited

[5189] Code ↔ Paper doi:10.1038/s41467-026-71415-x [paper, repository]

Regional BOLD variability reflects microstructural maturation and neuronal ensheathment in the preterm infant cortex.

Journal: Nature communications

Authors' code: ekaden/smt (BSD-2-Clause), fsl.fmrib.ox.ac.uk/fsl/fslwiki (no license), developingconnectome.org (no license), git.fmrib.ox.ac.uk/matteob/dhcp_neo_dmri_pipeline_release (no license), Zenodo 18875986 (CC-BY-4.0)

Status: code verified, 51 files readable, 11 matches

[5190] doi:10.1038/s41467-026-71524-7 [paper, data]

Gmppb-mutant mice exhibit dystroglycanopathy symptoms that are rescued with GSK3β inhibition or AAV-mediated GMPPB gene replacement.

Journal: Nature communications

Status: data only, 1 dataset cited

[5191] doi:10.1038/s41467-026-71666-8 [paper, data]

Distinct distributed neural dynamics predict pallium-dependent social approach.

Journal: Nature communications

Status: data only, 1 dataset cited

[5192] Code ↔ Paper doi:10.1038/s41467-026-71719-y [paper, repository]

Brain functional-structural gradient coupling reflects development, behavior and genetic influences.

Journal: Nature communications

Authors' code: sbci-brain/SBCI_Pipeline (no license), mica-mni/brainspace (BSD-3-Clause), Zhao-team/SF-Gradient-Coupling (MIT), Zenodo 18912522 (CC-BY-4.0)

Status: code verified, 329 files readable, 20 matches

[5193] Code ↔ Paper doi:10.1038/s41467-026-71732-1 [paper, repository]

Trajectories of plasma and CSF MTBR-tau243 and phosphorylated-tau species across the Alzheimer's disease continuum.

Journal: Nature communications

Authors' code: Betthauser-Neuro-Lab/SILA-AD-Biomarker (GPL-3.0)

Status: code verified, 11 files readable, 2 matches

[5194] Code ↔ Paper doi:10.1038/s41597-026-07120-7 [paper, repository]

PhysioMotion Artifact: A task-driven EEG dataset with point-wise motion artifact annotations.

Journal: Scientific data

Authors' code: JiangweiYu221/PhysioMotion_Artifact (MIT), neuracle/neuracle-api (LGPL-2.1)

Status: code verified, 23 files readable, 13 matches

[5195] Code ↔ Paper doi:10.1038/s41597-026-07138-x [paper, repository]

Medical Spine Sagittal MRI Dataset for Segmentation and Foraminal Stenosis detection.

Journal: Scientific data

Authors' code: AISSLab2025/LSS-MRI-AISSLab-Dataset (no license)

Status: code verified, 9 files readable, 7 matches

[5196] Code ↔ Paper doi:10.1038/s41598-026-43153-z [paper, repository]

ETX2Vec: a fraud detection algorithm for ethereum based on temporal biased random walk strategy.

Journal: Scientific reports

Authors' code: lujiarong1203/eth2vec](https: (no license)

Status: dead link

[5197] Code ↔ Paper doi:10.1038/s41598-026-43381-3 [paper, repository]

FusionLSTM-CNF: a confidence-calibrated multi-modal late fusion framework for robust stock movement prediction under uncertainty.

Journal: Scientific reports

Authors' code: veecky29/fusionlstm_cnf (no license)

Status: empty repository

[5198] Code ↔ Paper doi:10.1038/s41598-026-44063-w [paper, repository]

Neuronal silence as a predictive biomarker and target for epileptic seizures suppression.

Journal: Scientific reports

Authors' code: DiogoLeonai/Neuronal-silence-as-an-epileptic-seizure-biomarker (no license)

Status: code verified, 4 files readable, 1 match

[5199] Code ↔ Paper doi:10.1038/s41598-026-45966-4 [paper, repository]

Changes in visuocortical engagement and oscillatory brain activity during associative learning.

Journal: Scientific reports

Authors' code: OSF qr37b (no license)

Status: code verified, 2 files readable, 2 matches

[5200] Code ↔ Paper doi:10.1038/s41598-026-46419-8 [paper, repository]

Exploring the effect of different neural strategies on the knee joint contact forces during walking in adults.

Journal: Scientific reports

Authors' code: GiorgioD89/ProtoAgingMCMC (Apache-2.0), stanfordnmbl/MatlabStaticOptimization (Apache-2.0), HansUniVie/MuscleCoordinationRetraining (Apache-2.0)

Status: code verified, 32 files readable, 4 matches

[5201] Code ↔ Paper doi:10.1038/s41598-026-46803-4 [paper, repository]

BrainGraphNet-ViT model: a hybrid model combining vision transformers and graph convolutional networks for brain tumor diagnosis.

Journal: Scientific reports

Authors' code: kaggle.com/dsv/2645886 (no license)

Status: dead link

[5202] Code ↔ Paper doi:10.1038/s41598-026-47047-y [paper, repository]

Imaging-genetics-based dementia risk prediction using deep survival neural networks in the Rotterdam Study.

Journal: Scientific reports

Authors' code: yyyuj/Deep_Survival (no license)

Status: code verified, 29 files readable, 6 matches

[5203] doi:10.1038/s41598-026-47798-8 [paper, data]

Multi-scale covariance filtering for edge-preserving medical image fusion.

Journal: Scientific reports

Status: data only, 1 dataset cited

[5204] doi:10.1038/s41746-026-02603-8 [paper]

An EEG-based digital biomarker for personalizing transcranial magnetic stimulation in major depressive disorder.

Journal: NPJ digital medicine

Status: code on request

[5205] Code ↔ Paper doi:10.1038/s42003-026-09948-6 [paper, repository]

A scalable human-zebrafish xenotransplantation model reveals gastrosome-mediated processing of dying neurons by human microglia.

Journal: Communications biology

Authors' code: Zenodo 18997850 (GPL-3.0)

Status: code verified, 16 files readable, 2 matches

[5206] Code ↔ Paper doi:10.1038/s42003-026-09992-2 [paper, repository]

Dynamic competition between bottom-up saliency and top-down goals in early visual cortex.

Journal: Communications biology

Authors' code: OSF szuxa (no license)

Status: code verified, 9 files readable, 1 match

[5207] doi:10.1038/s43856-026-01566-x [paper]

Plasma acetic acid mediates the relationship between gut microbiome and various health measures in older adults.

Journal: Communications medicine

Status: code on request

[5208] Code ↔ Paper doi:10.1093/braincomms/fcag127 [paper, repository]

Individualized phenotyping of functional amyotrophic lateral sclerosis pathology in sensorimotor cortex.

Journal: Brain communications

Authors' code: avinashkalyani/ALS_PLSr (no license)

Status: code verified, 15 files readable, 11 matches

[5209] Code ↔ Paper doi:10.1097/pr9.0000000000001437 [paper, repository]

Electroencephalography during acute painful procedures in neonates: a scoping review.

Journal: Pain reports

Authors' code: lukebax/neonate-eeg-pain-scr (Apache-2.0)

Status: code verified, 11 files readable, 1 match

[5210] Code ↔ Paper doi:10.1113/jp290593 [paper, repository]

Machine-learning classification of motor unit types in the adult mouse.

Journal: The Journal of physiology

Authors' code: Zenodo 18896999 (GPL-3.0)

Status: code verified

[5211] Code ↔ Paper doi:10.1162/imag.a.1197 [paper, repository]

Blood volume-sensitive laminar fMRI with VASO in human hippocampus: Capabilities and biophysical challenges at clinical 7T scanners.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: gitlab.ruhr-uni-bochum.de/neuropsy/vaso_hc (no license)

Status: code verified, 24 files readable, 9 matches

[5212] Code ↔ Paper doi:10.1177/11779322251411169 [paper, repository]

Comprehensive ceRNA Profiling Uncovers Clinically Relevant Hub lncRNAs in Glioblastoma.

Journal: Bioinformatics and biology insights

Authors' code: zz153/braincancer-ceRNA-network (no license)

Status: code verified, 14 files readable, 16 matches

[5213] Code ↔ Paper doi:10.1186/s12889-026-27289-1 [paper, repository]

UK dementia prevention policies and initiatives across the life-course: a scoping review (2009-2024).

Journal: BMC public health

Authors' code: OSF k89uf (no license)

Status: code found, still to be checked

[5214] doi:10.1186/s12964-026-02871-7 [paper]

Hematopoietic cell kinase regulates microglial/macrophage activation to drive neuroinflammation after traumatic brain injury.

Journal: Cell communication and signaling : CCS

Status: data only

[5215] doi:10.1186/s12974-026-03794-3 [paper, data]

Single-cell omics and flow cytometry identify distinct immune states of dural and brain-infiltrating IL-17-producing γδ T cells after experimental stroke.

Journal: Journal of neuroinflammation

Status: data only, 5 datasets cited

[5216] Code ↔ Paper doi:10.1186/s12987-026-00788-4 [paper, repository]

Brain ventricle morphology markers in predicting shunt surgery outcome in idiopathic normal-pressure hydrocephalus.

Journal: Fluids and barriers of the CNS

Authors' code: AP-environment/3D-Mesh-Feature-Extraction (CC0-1.0)

Status: code verified, 3 files readable, 3 matches

[5217] doi:10.1186/s13059-026-04050-w [paper, data]

Transposable element-mediated evolutionary expansion of Sox2- and Brn2-binding regulatory modules for mammalian neural-cell differentiation.

Journal: Genome biology

Status: data only, 2 datasets cited

[5218] doi:10.1186/s13148-026-02124-x [paper, data]

Comparison of DNA methylation measured in saliva and peripheral blood as a marker of exposure and outcome: a scoping review.

Journal: Clinical epigenetics

Status: data only, 1 dataset cited

[5219] doi:10.1371/journal.pone.0346730 [paper, data]

Day-night variation and age-related differences in gadolinium-based contrast media enhancement in the brain: A T1 mapping study.

Journal: PloS one

Status: data only, 1 dataset cited

[5220] Code ↔ Paper doi:10.1523/eneuro.0076-26.2026 [paper, repository]

Exogenously Driven Neural Reactivation of Spatially Matching Visual Working-Memory Contents.

Journal: eNeuro

Authors' code: OSF e3gxj (no license)

Status: code verified, 21 files readable, 15 matches

[5221] doi:10.3389/fnhum.2026.1763477 [paper, data]

Toward precision EEG: assessing the reliability of individual-level ERPs across EEG systems.

Journal: Frontiers in human neuroscience

Status: data only, 1 dataset cited

[5222] doi:10.3389/fnhum.2026.1811759 [paper, data]

MCFANet: a multi-class fusion attention network for motor imagery EEG classification.

Journal: Frontiers in human neuroscience

Status: data only, 1 dataset cited

[5223] doi:10.3389/frai.2026.1777236 [paper, data]

Design of a deep learning prediction model for Alzheimer's and Parkinson's Disease using MRI images.

Journal: Frontiers in artificial intelligence

Status: data only, 1 dataset cited

[5224] doi:10.3390/biomedicines14040859 [paper]

Current Perspectives on the Inflammatory Bowel Disease Pathogenesis of Microbiota and the Gut-Brain Axis, and Emerging Therapeutics.

Journal: Biomedicines

Status: code on request

[5225] Code ↔ Paper doi:10.34133/csbj.0036 [paper, repository]

HYG-mol: An Interpretable Multimodal Hypergraph Framework for Molecular Property Prediction.

Journal: Computational and structural biotechnology journal

Authors' code: sutera777/HYG-mol (no license)

Status: code verified, 16 files readable, 11 matches

[5226] Code ↔ Paper doi:10.64898/2026.04.08.26350384 [paper, repository]

JARVIS, should this study be selected for full-text screening? Performance of a Joint AI-ReViewer Interactive Screening tool for systematic reviews

Journal: medRxiv (preprint)

Authors' code: gabsbarreto/JARVIS-R (no license)

Status: code verified, 9 files readable, 4 matches

[5227] Code ↔ Paper doi:10.7554/elife.100674 [paper, repository]

The dominance of large-scale phase dynamics in human cortex, from delta to gamma.

Journal: eLife

Authors' code: duguelab/traveling-wave-analysis (GPL-3.0)

Status: code verified, 12 files readable, 7 matches

[5228] Code ↔ Paper doi:10.7554/elife.108023 [paper, repository]

Challenges in replay detection by TDLM in post-encoding resting state.

Journal: eLife

Authors' code: identifiers.org/rrid:scr_002630 (no license), cimh-clinical-psychology/desmrrest-tdlm-simulation (GPL-3.0), Zenodo 12623445 (CC-BY-4.0)

Status: code verified, 57 files readable, 19 matches

Wednesday, 8 April 2026 (29 papers)

[5229] doi:10.1002/epi4.70260 [paper, data]

A multicenter, video-EEG-based validation of a multimodal wearable device for focal seizure detection in adults: The SeizeIT2 study.

Journal: Epilepsia open

Status: data only, 1 dataset cited

[5230] doi:10.1007/s12035-026-05845-5 [paper, data]

Leukocytes Transcriptome Analysis of Genes Associated with Epilepsy Duration and Age of Onset.

Journal: Molecular neurobiology

Status: data only, 1 dataset cited

[5231] Code ↔ Paper doi:10.1016/j.isci.2026.115657 [paper, repository]

Integration of machine learning to develop a disulfidptosis model for predicting glioma prognosis, immunotherapy response, and drug.

Journal: iScience

Authors' code: clarozhong/Rdata (no license), IOBR/IOBR (GPL), paulgeeleher/pRRophetic (no license), cailab-tamu/scTenifoldKnk (GPL)

Status: code verified, 171 files readable, 27 matches

[5232] doi:10.1016/j.omton.2026.201201 [paper]

Enable CAR T cell immunotherapy in glioblastoma by modifying its microenvironment via oncolytic adenovirus encoding bispecific T cell engager.

Journal: Molecular therapy. Oncology

Status: code on request

[5233] Code ↔ Paper doi:10.1038/s41467-026-71414-y [paper, repository]

Bed nucleus of the stria terminalis connectivity during food cue and taste processing under stress.

Journal: Nature communications

Authors' code: evaghreins/Gustometer_Stress_BNST_DCM (no license), Zenodo 18738387 (CC-BY-4.0)

Status: code verified, 26 files readable, 9 matches

[5234] Code ↔ Paper doi:10.1038/s41467-026-71542-5 [paper, repository]

Astrocyte fatty acid metabolism as a driver of risk for major depressive disorder.

Journal: Nature communications

Authors' code: Zenodo 10181579 (CC-BY-4.0)

Status: code verified, 16 files readable, 8 matches

[5235] doi:10.1038/s41467-026-71574-x [paper, data]

CB1 receptor signaling at the cingulate-striatal circuit is anxiogenic.

Journal: Nature communications

Status: data only, 1 dataset cited

[5236] doi:10.1038/s41531-026-01316-9 [paper]

Distinct finger-tapping feature in progressive supranuclear palsy correlates with motor function and brain atrophy.

Journal: NPJ Parkinson's disease

Status: code on request

[5237] Code ↔ Paper doi:10.1038/s41586-026-10329-6 [paper, repository]

Synthetic super-enhancers enable precision viral immunotherapy.

Journal: Nature

Authors' code: alhafidzhamdan/sse_gene_therapy (MIT), Zenodo 18676096 (MIT)

Status: code verified, 32 files readable, 8 matches

[5238] Code ↔ Paper doi:10.1038/s41586-026-10345-6 [paper, repository]

Population-scale repeat expansions elucidate disease risk and brain atrophy.

Journal: Nature

Authors' code: rgcgithub/regenie (MIT), gymreklab/GangSTR (GPL-3.0), Illumina/ExpansionHunter (MIT), chrchang/plink-ng (GPL)

Status: code verified, 1,569 files readable, 6 matches

[5239] Code ↔ Paper doi:10.1038/s41594-026-01787-7 [paper, repository]

Microtubules in the axon are GDP bound but adopt a stable GTP-like expanded state.

Journal: Nature structural & molecular biology

Authors' code: rui--zhang/Microtubule (no license), RollmecakLab/Layer-Line-Analysis (no license), bioinformatics.ccr.cancer.gov/btep/classes (no license)

Status: code verified, 30 files readable, 2 matches

[5240] Code ↔ Paper doi:10.1038/s42003-026-09956-6 [paper, repository]

Linking changes in sulcal morphometry to cognitive development from childhood to adolescence.

Journal: Communications biology

Authors' code: rmarkello/abagen (BSD-3-Clause), murraylab/brainsmash (GPL-3.0), yijinshan1/sulcus2025 (no license)

Status: code verified, 93 files readable, 13 matches

[5241] doi:10.1038/s42003-026-09988-y [paper, data]

Thalamic involvement defines distinct slow-wave subtypes in NREM sleep.

Journal: Communications biology

Status: code on request, 1 dataset cited

[5242] Code ↔ Paper doi:10.1093/nargab/lqag039 [paper, repository]

SpNeigh: spatial neighborhood and differential expression analysis for high-resolution spatial transcriptomics.

Journal: NAR genomics and bioinformatics

Authors' code: jinming-cheng/cheng_annotation_bmc_bioinfo (no license), jinming-cheng/SpNeigh (GPL-3.0), Zenodo 17505217 (GPL-3.0), jinming-cheng/Rcodes_for_figures_SpNeigh_ms (no license), Zenodo 19109340 (CC-BY-4.0)

Status: code verified, 88 files readable, 40 matches

[5243] Code ↔ Paper doi:10.1093/nc/niag011 [paper, repository]

Towards a bridge between intracerebral and surface EEG signatures of conscious report.

Journal: Neuroscience of consciousness

Authors' code: jianghao-liu/attentionconscious-report (no license), Zenodo 8113973 (other-open), jianghao-liu/attention-conscious-report (no license)

Status: code verified, 8 files readable, 2 matches

[5244] doi:10.1126/sciadv.ady2696 [paper, data]

Pulmonary neuroendocrine cell-derived exosomes regulate iron homeostasis and oxidative stress in lung neurons.

Journal: Science advances

Status: data only, 3 datasets cited

[5245] Code ↔ Paper doi:10.1155/da/7682055 [paper, repository]

Striosome-Like Structural Connectivity Is Reduced in the Rostral Putamen in Anxiety Disorder.

Journal: Depression and anxiety

Authors' code: jeff-waugh/Striatal-Connectivity-based-Parcellation (no license)

Status: code verified, 17 files readable, 2 matches

[5246] doi:10.1162/imag.a.1209 [paper]

Naturalistic movie viewing is an effective functional localizer of the fusiform face area in adolescents with and without autism.

Journal: Imaging neuroscience (Cambridge, Mass.)

Status: code on request

[5247] doi:10.1172/jci.insight.202639 [paper, data]

8-Aminoguanine protects against paclitaxel-induced neural degeneration and mechanical allodynia.

Journal: JCI insight

Status: code on request, 1 dataset cited

[5248] Code ↔ Paper doi:10.1186/s13293-026-00885-x [paper, repository]

A transient sex-biased transcriptional program shapes early postnatal L2/3 neuron development.

Journal: Biology of sex differences

Authors' code: emarcosgra/RNAseq-scripts (GPL-3.0)

Status: empty repository, 2 files readable

[5249] doi:10.1371/journal.pone.0343962 [paper, data]

Leprosy neuropathy and demyelinating impairment: How should we interpret this neurophysiological pattern?

Journal: PloS one

Status: data only, 1 dataset cited

[5250] Code ↔ Paper doi:10.1371/journal.pone.0346255 [paper, repository]

Single-cell analysis of inhibitory efferent neurons of the zebrafish lateral line.

Journal: PloS one

Authors' code: Zenodo 1400710 (MIT), nf-core (no license), nf-core/rnaseq (MIT)

Status: code verified, 30 files readable, 1 match

[5251] Code ↔ Paper doi:10.1371/journal.ppat.1014115 [paper, repository]

Venezuelan equine encephalitis virus infection causes chronic neurobehavioral outcomes, cellular remodeling, and hippocampal single-cell transcriptomic changes.

Journal: PLoS pathogens

Authors' code: Gavin-Yinld/VEEV_scRNA-seq (no license)

Status: code verified, 2 files readable, 3 matches

[5252] Code ↔ Paper doi:10.21203/rs.3.rs-9200088/v1 [paper, repository]

Intrinsic cortical geometry is associated with individual differences in local functional organization

Journal: Research Square (preprint)

Authors' code: alberti-f/VarioGrad (MIT)

Status: code verified, 38 files readable, 5 matches

[5253] Code ↔ Paper doi:10.3389/fncir.2026.1741762 [paper, repository]

Task-dependent increases and decreases of BOLD signal in theory of mind brain regions during strategic social interaction.

Journal: Frontiers in neural circuits

Authors' code: IHB-IBR-department/TMFC_toolbox (GPL-3.0)

Status: code verified, 84 files readable, 4 matches

[5254] doi:10.3389/fnmol.2026.1750882 [paper, data]

Exploring the molecular mechanism of dexmedetomidine in alleviating blood-brain barrier disruption in rats with cerebral ischemia reperfusion injury based on network pharmacology.

Journal: Frontiers in molecular neuroscience

Status: data only, 1 dataset cited

[5255] Code ↔ Paper doi:10.3390/biom16040552 [paper, repository]

Electrophysiological Characterization of the Venom and Toxins from the Scorpion <i>Tityus championi</i> Targeting Voltage-Gated Sodium Channels and Molecular Modeling of Tch3, a Toxin with Therapeutic Potential for Pain Relief.

Journal: Biomolecules

Authors' code: GalitAkerman/Statistics-Helix-Article (no license), GalitAkerman/CR-ScorpionVenom-Nav (MIT)

Status: code verified, 7 files readable

[5256] doi:10.64898/2026.04.08.26350385 [paper]

Associations between corticolimbic glutamatergic metabolites and functional connectivity in people at clinical high-risk for psychosis

Journal: medRxiv (preprint)

Status: code on request

[5257] Code ↔ Paper doi:10.7554/elife.105710 [paper, repository]

Neuropeptidergic circuit modulation of developmental sleep in <i>Drosophila</i>.

Journal: eLife

Authors' code: Zenodo 18996367 (MIT), chikayo2020-2024/drosophila-larval-sleep-code (MIT)

Status: code verified, 14 files readable

Tuesday, 7 April 2026 (37 papers)

[5258] Code ↔ Paper doi:10.1002/mrm.70366 [paper, repository]

Mesoscale Whole-Brain T<sub>2</sub>*-Weighted and Associated Quantitative MRI in Humans at 10.5 T.

Journal: Magnetic resonance in medicine

Authors' code: jiaen-liu/moco (no license)

Status: code verified, 276 files readable, 2 matches

[5259] Code ↔ Paper doi:10.1016/j.celrep.2026.117235 [paper, repository]

Integration of aged brain multi-omics reveals cross-system mechanisms underlying Alzheimer's disease heterogeneity.

Journal: Cell reports

Authors' code: Zenodo 18842083 (GPL-2.0), RushAlz/ROSMAP_MOFA_public_release (GPL-2.0), Zenodo 18842084 (GPL-2.0)

Status: code verified, 69 files readable, 12 matches

[5260] Code ↔ Paper doi:10.1016/j.dcn.2026.101721 [paper, repository]

Neonatal amygdala microstructure and structural connectivity are associated with autistic traits at 2 years of age.

Journal: Developmental cognitive neuroscience

Authors' code: git.ecdf.ed.ac.uk/jbrl/amy-neurodev (no license)

Status: code verified

[5261] Code ↔ Paper doi:10.1017/s0033291726104103 [paper, repository]

Linking brain structure to stress reactivity: cingulate surface area predicts acute cortisol responses.

Journal: Psychological medicine

Authors' code: eminSerin/stress-fs-paper (GPL-3.0)

Status: code verified, 22 files readable, 6 matches

[5262] Code ↔ Paper doi:10.1038/s41380-026-03571-x [paper, repository]

Convergent coexpression reveals shared biological mechanisms underlying common and rare variant risk in six neuropsychiatric disorders.

Journal: Molecular psychiatry

Authors' code: FinucaneLab/gene_features (GPL-3.0), ajaynadig/bhr (MIT), FinucaneLab/pops (GPL-3.0), hakyimlab/MetaXcan (MIT), RuderferLab/coexpression_convergence (no license), bulik/ldsc (GPL-3.0), YuLab-SMU/clusterProfiler (no license)

Status: code verified, 358 files readable, 6 matches

[5263] doi:10.1038/s41392-026-02648-x [paper, data]

Prostaglandin E<sub>2</sub>-driven dedifferentiation of Schwann cells leads to perineural invasion in pancreatic ductal adenocarcinoma.

Journal: Signal transduction and targeted therapy

Status: data only, 1 dataset cited

[5264] Code ↔ Paper doi:10.1038/s41467-026-71112-9 [paper, repository]

Modelling synaptic dysfunction in childhood dementia using human iPSC-derived cortical networks.

Journal: Nature communications

Authors' code: bardylab/MPSIIIA_snRNAseq_Synaptic_Paper_2026 (no license)

Status: code verified, 4 files readable, 13 matches

[5265] Code ↔ Paper doi:10.1038/s41467-026-71270-w [paper, repository]

Spatiotemporal dynamics of the human cortical functional hierarchy across the lifespan.

Journal: Nature communications

Authors' code: sunlianglong/brainchart-fc-lifespan (no license), QionglingLi/LifespanGradient (BSD-3-Clause), gitlab.qunex.yale.edu/ (no license), DCAN-Labs/abcd-hcp-pipeline (BSD-3-Clause), BioMedIA/dhcp-structural-pipeline (Apache-2.0), iBEAT-V2/iBEAT-V2.0-Docker (no license), ecr05/MSM_HOCR (no license), StuartJO/plotSurfaceROIBoundary (GPL-3.0), NeuroanatomyAndConnectivity/gradient_analysis (MIT), Zenodo 18764982 (BSD-3-Clause)

Status: code verified, 1,377 files readable, 14 matches

[5266] Code ↔ Paper doi:10.1038/s41467-026-71555-0 [paper, repository]

A deep representation learning model to predict response to vagus nerve stimulation.

Journal: Nature communications

Authors' code: gmilab/VQVNS (no license), huggingface.co/hsuresh/vqvns (apache), Zenodo 18510266 (CC-BY-4.0)

Status: code verified, 51 files readable, 3 matches

[5267] Code ↔ Paper doi:10.1038/s41467-026-71604-8 [paper, repository]

Respiration as a dynamic modulator of sensory sampling.

Journal: Nature communications

Authors' code: OSF qasvp (no license)

Status: code verified, 8 files readable, 5 matches

[5268] Code ↔ Paper doi:10.1038/s41593-026-02255-7 [paper, repository]

Neural circuits encode prior knowledge of temporal statistics.

Journal: Nature neuroscience

Authors' code: JorritMontijn/zetatest (GPL-3.0), BarbourLab/lussac (AGPL-3.0), cortex-lab/allenCCF (no license), Zenodo 18434825 (MIT), narainneuro/koppenetal2026 (MIT)

Status: code verified, 2,055 files readable, 13 matches

[5269] Code ↔ Paper doi:10.1038/s41598-026-45730-8 [paper, repository]

Gestalt laws enhance the representation of figures over backgrounds in the visual cortex and influence contrast perception.

Journal: Scientific reports

Authors' code: OSF t5rcu (no license)

Status: code verified, 1 file readable

[5270] doi:10.1038/s41684-026-01712-x [paper, data]

Ontogeny of zebrafish behaviors: comparative evaluation of locomotor, social and anxiety parameters in larval, juvenile and adult stages.

Journal: Lab animal

Status: data only, 1 dataset cited

[5271] Code ↔ Paper doi:10.1038/s44400-026-00074-y [paper, repository]

Methylomic signatures of tau and amyloid-beta in transgenic mouse models of Alzheimer's disease neuropathology.

Journal: NPJ dementia

Authors' code: SziKayLeung/AD_mouse_methylation (no license), Zenodo 15741353 (CC-BY-4.0)

Status: code verified, 93 files readable, 16 matches

[5272] Code ↔ Paper doi:10.1073/pnas.2528851123 [paper, repository]

Sender-receiver subdivisions of the default mode network in perceptual and memory-guided cognition.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: OSF 9rk6m (no license)

Status: code verified, 1 file readable, 1 match

[5273] Code ↔ Paper doi:10.1073/pnas.2535986123 [paper, repository]

The colors of images preferred by individual voxels can be used to delineate functionally distinct visually responsive brain areas.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: OSF v5wxn (no license)

Status: code verified, 18 files readable

[5274] Code ↔ Paper doi:10.1093/pnasnexus/pgag074 [paper, repository]

Decomposing the neurocomputational mechanisms of deontological moral preferences.

Journal: PNAS nexus

Authors' code: OSF 2huxq (no license)

Status: code verified, 6 files readable, 1 match

[5275] Code ↔ Paper doi:10.1101/gr.281113.125 [paper, repository]

Single-nucleus multiomic profiling of the aging mouse substantia nigra reveals conserved gene alterations linked to Parkinson's disease.

Journal: Genome research

Authors' code: wkl1990/SN_aging (no license)

Status: code verified, 46 files readable, 12 matches

[5276] Code ↔ Paper doi:10.1101/gr.281350.125 [paper, repository]

High-fidelity bidirectional translation between single-cell transcriptomes and DNA methylomes with scBOND.

Journal: Genome research

Authors' code: mcgilldinglab/scCross (MIT), tanlabcode/MAPLE.1.0 (no license), BioX-NKU/scBOND (MIT), Zenodo 17699419 (CC-BY-4.0)

Status: code verified, 79 files readable, 9 matches

[5277] Code ↔ Paper doi:10.1159/000551467 [paper, repository]

Safety of 3 Tesla Magnetic Resonance Imaging in Active Peripheral Nerve Field Stimulation Device for Facial Pain.

Journal: Stereotactic and functional neurosurgery

Authors' code: Zenodo 10685481 (MIT)

Status: empty repository

[5278] doi:10.1162/imag.a.1191 [paper, data]

Robust functional ultrasound imaging in the awake and behaving brain: A systematic framework for motion artifact removal.

Journal: Imaging neuroscience (Cambridge, Mass.)

Status: data only, 1 dataset cited

[5279] Code ↔ Paper doi:10.1162/imag.a.1196 [paper, repository]

Failure to detect entorhinal grid-like signals in a passive navigation human fMRI study.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: jokran/GLS_fMRI_Analysis_Kransberg_2025 (MIT)

Status: code verified, 3 files readable, 2 matches

[5280] Code ↔ Paper doi:10.1162/imag.a.1199 [paper, repository]

Sustained alpha oscillations serve attentional prioritization in working memory, not maintenance.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: OSF dtknz (no license)

Status: code verified, 59 files readable, 7 matches

[5281] Code ↔ Paper doi:10.1186/s12967-026-08069-2 [paper, repository]

Interpretative diagnostic model for neuroblastoma metastases using bone marrow cytology.

Journal: Journal of translational medicine

Authors' code: dr-jenna/cMIL (no license)

Status: code verified, 33 files readable, 1 match

[5282] Code ↔ Paper doi:10.1186/s13059-026-04052-8 [paper, repository]

Sex and tissue resolved co-expression networks reveal a female placental-brain axis protective against prenatal PCB exposure.

Journal: Genome biology

Authors' code: kellychau/RNAseqWeightedGeneCorrelationNetworksPCBBrainPlacenta (MIT), Zenodo 19011412 (MIT)

Status: code verified, 20 files readable, 2 matches

[5283] Code ↔ Paper doi:10.1371/journal.pbio.3003740 [paper, repository]

Sleep strengthens successor representations of learned sequences in humans.

Journal: PLoS biology

Authors' code: OSF sn9kv (no license)

Status: code verified, 12 files readable, 4 matches

[5284] Code ↔ Paper doi:10.1371/journal.pcbi.1014157 [paper, repository]

Modeling spatial contrast sensitivity in responses of primate retinal ganglion cells to natural movies.

Journal: PLoS computational biology

Authors' code: gollischlab/SpatiotemporalSCModel (MIT), dimokaramanlis/KiloSortMEA (GPL-2.0)

Status: code verified, 135 files readable, 23 matches

[5285] doi:10.1371/journal.pone.0346417 [paper, data]

Muscle activation and intermuscular coordination adaptations to early strength training during maximal force production.

Journal: PloS one

Status: data only, 1 dataset cited

[5286] Code ↔ Paper doi:10.18632/aging.206369 [paper, repository]

Association of epigenetic age acceleration with MRI biomarkers of aging and Alzheimer's disease neurodegeneration.

Journal: Aging

Authors' code: danbelsky/DunedinPACE (GPL-3.0)

Status: code verified, 7 files readable

[5287] doi:10.21203/rs.3.rs-9235100/v1 [paper, data]

Structural Brain Changes Across the Female Lifespan: Puberty, Pregnancy, and Menopause Show Shared and Distinct Trajectories

Journal: Research Square (preprint)

Status: data only, 1 dataset cited

[5288] doi:10.26508/lsa.202503455 [paper, data]

Catalytic activity of KMT5B promotes ciliogenesis without affecting global chromatin accessibility.

Journal: Life science alliance

Status: data only, 1 dataset cited

[5289] doi:10.3389/fmicb.2026.1765079 [paper, data]

Inulin ameliorates chronic ketamine-induced anxiety-like behaviors and impairments in spatial learning and memory: involvement of gut microbiota, microbial metabolite short-chain fatty acids, and the BDNF-TrkB-ERK1/2-CREB pathway.

Journal: Frontiers in microbiology

Status: data only, 1 dataset cited

[5290] Code ↔ Paper doi:10.3389/fped.2026.1777561 [paper, repository]

Development and validation of a machine learning model to predict prognostic outcomes in infantile epileptic spasms syndrome.

Journal: Frontiers in pediatrics

Authors' code: mdbrown/rmda (no license)

Status: code verified, 11 files readable, 1 match

[5291] Code ↔ Paper doi:10.3390/bioengineering13040430 [paper, repository]

Configurable Modular EEG Classification Framework with Multiscale Features and Ensemble Learning: A Reproducible Evaluation for Schizophrenia Detection.

Journal: Bioengineering (Basel, Switzerland)

Authors' code: zhang470 (no license)

Status: code verified

[5292] doi:10.3758/s13415-026-01428-y [paper]

Role of the inferior frontal gyrus and impulsivity in approach motivation: A low-frequency repetitive transcranial magnetic stimulation study.

Journal: Cognitive, affective & behavioral neuroscience

Status: code on request

[5293] Code ↔ Paper doi:10.64898/2026.04.02.26349812 [paper, repository]

9.4 Tesla MRI in focal epilepsy patients with high-resolution surface-based profiling of focal cortical dysplasias

Journal: medRxiv (preprint)

Authors' code: ckronlage/3T9T_profiling_pub (no license)

Status: code verified, 15 files readable, 8 matches

[5294] doi:10.7759/cureus.106581 [paper, data]

Structural Alterations in Cortical Thickness and Volume in Attention Deficit Hyperactivity Disorder (ADHD): An Exploratory Surface-Based Morphometric Study.

Journal: Cureus

Status: data only, 2 datasets cited

Monday, 6 April 2026 (28 papers)

[5295] Code ↔ Paper doi:10.1002/dad2.70323 [paper, repository]

The primary care brain health navigator: A perspective on implementation.

Journal: Alzheimer's & dementia (Amsterdam, Netherlands)

Authors' code: aafp.org/pubs/fpm (no license)

Status: code verified

[5296] doi:10.1002/epi.70239 [paper]

Sodium-glucose cotransporter 2 inhibitors and the risk of late onset epilepsy: A real-world cohort study.

Journal: Epilepsia

Status: code on request

[5297] Code ↔ Paper doi:10.1007/s00787-025-02931-2 [paper, repository]

The association between motor coordination, behavior, cognition and brain structure in children: an ABCD study.

Journal: European child & adolescent psychiatry

Authors' code: pnlbwh/ukftractography (other), SlicerDMRI/whitematteranalysis (other)

Status: code verified, 226 files readable, 2 matches

[5298] doi:10.1007/s10565-026-10177-0 [paper]

Multi-omics analysis and experimental validation reveal the IRF7-CXCL10 axis as a master regulator of microglial PCD in ischemic stroke.

Journal: Cell biology and toxicology

Status: data only

[5299] Code ↔ Paper doi:10.1007/s10916-026-02374-5 [paper, repository]

Attention-Enhanced U-Net for Sensor-Efficient High-Density EEG Reconstruction in Wearable Brain Monitoring Systems.

Journal: Journal of medical systems

Authors' code: IASlab526/VEEG-A-U-Net (MIT), IASlab526/VEEG-A-U-NetAdditional (no license)

Status: code verified, 8 files readable

[5300] doi:10.1016/j.isci.2026.115629 [paper]

Neuronal Igfbp2 deficiency in the prefrontal cortex impairs cognition through synaptic dysfunction in male mice.

Journal: iScience

Status: code on request

[5301] doi:10.1021/acsptsci.5c00821 [paper, data]

Blood-Brain Barrier (BBB)-Penetrable Androgen Receptor (AR) Degrader as a Potential Therapeutic Agent for Glioblastoma.

Journal: ACS pharmacology & translational science

Status: data only, 1 dataset cited

[5302] Code ↔ Paper doi:10.1038/s41398-026-04025-2 [paper, repository]

Brain energetic landscapes shape state dysregulation in major depressive disorder: a morphological network controllability perspective.

Journal: Translational psychiatry

Authors' code: netneurolab/neuromaps (CC-BY-NC-SA-4.0), thomasyeolab/cbig (MIT), isebenius/MIND (no license), NeuroenergeticsLab/control_costs (no license), smweinst.github.io/nest-method (no license), singlesp/energy_landscape (no license), rmarkello/pyls (GPL-2.0)

Status: code verified, 2,319 files readable, 1 match

[5303] Code ↔ Paper doi:10.1038/s41467-026-71281-7 [paper, repository]

Downregulated transcription in chromosomal domains of midbrain dopamine neurons linked to schizophrenia.

Journal: Nature communications

Authors' code: codeocean:2247653 (no license), GabrielHoffman/mvIC (no license), cran.r-project.org/package=remacor (no license)

Status: code verified, 16 files readable, 3 matches

[5304] Code ↔ Paper doi:10.1038/s41467-026-71406-y [paper, repository]

CellLoop: Identifying single-cell 3D genome chromatin loops.

Journal: Nature communications

Authors' code: YusenYe/CellLoop (no license), Zenodo 18784293 (CC-BY-4.0)

Status: code verified, 24 files readable, 7 matches

[5305] doi:10.1038/s41539-026-00420-y [paper]

Neurophysiological prediction of competitive orientation via EEG during outcome evaluation in gamified learning.

Journal: NPJ science of learning

Status: code on request

[5306] Code ↔ Paper doi:10.1038/s41540-026-00699-y [paper, repository]

Inferring relationships among major psychiatric disorders in a resting-state functional connectivity-informed embedding space.

Journal: NPJ systems biology and applications

Authors' code: LeonBai/rsFC_embedding (no license)

Status: code verified, 3 files readable

[5307] Code ↔ Paper doi:10.1038/s41591-026-04287-9 [paper, repository]

An international mega-analysis of psychedelic drug effects on brain circuit function.

Journal: Nature medicine

Authors' code: banilo/BOLD_psychedelics_consortium (no license)

Status: code verified, 2 files readable, 2 matches

[5308] Code ↔ Paper doi:10.1038/s41597-026-07193-4 [paper, repository]

A single-nucleus RNA-seq dataset of the colon in Pink1-deficient and wild-type mice.

Journal: Scientific data

Authors' code: figshare 30702425 (CC-BY-4.0)

Status: code verified, 1 file readable, 7 matches

[5309] Code ↔ Paper doi:10.1038/s41598-026-47179-1 [paper, repository]

Wavelet-enhanced autoencoder based image denoising with CNN fusion.

Journal: Scientific reports

Authors' code: Zenodo 19081947 (CC-BY-4.0)

Status: code verified, 3 files readable, 6 matches

[5310] Code ↔ Paper doi:10.1038/s41598-026-47945-1 [paper, repository]

GACNet: A graph attention-based neural network for electroencephalography localization via contrastive learning.

Journal: Scientific reports

Authors' code: timeseriessignal/GACNet (no license)

Status: code verified, 5 files readable, 2 matches

[5311] Code ↔ Paper doi:10.1038/s41746-026-02600-x [paper, repository]

Towards a physics informed digital twin to predict cerebral blood flow and cerebral vascular regulation.

Journal: NPJ digital medicine

Authors' code: jenniferkbriggs/CereBRLSIM (MIT)

Status: code verified, 16 files readable, 1 match

[5312] Code ↔ Paper doi:10.1038/s42003-026-09971-7 [paper, repository]

Extensive genetic interactions (epistasis) linked to alcohol use disorder in a high-risk population.

Journal: Communications biology

Authors' code: staslist/Biclustering_Epistasis (no license), njdjyxz/geno-bicluster (no license), Zenodo 18960797 (CC-BY-4.0), Zenodo 18961359 (CC-BY-4.0)

Status: code verified, 42 files readable, 2 matches

[5313] doi:10.1038/s44321-026-00422-8 [paper, data]

Hyperglycemia impairs cognitive function by inducing mitochondrial damage through lactylation of LRPPRC at K223.

Journal: EMBO molecular medicine

Status: code on request, 1 dataset cited

[5314] doi:10.1073/pnas.2516807123 [paper, data]

AI-derived therapeutic development of a serotonin receptor-targeting drug for the treatment of opioid use disorder.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Status: data only, 1 dataset cited

[5315] Code ↔ Paper doi:10.1073/pnas.2530482123 [paper, repository]

The detection of episodic memory in others biases social choice.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: OSF p2kjs (no license)

Status: code verified, 3 files readable, 5 matches

[5316] Code ↔ Paper doi:10.1093/braincomms/fcag123 [paper, repository]

Traumatic brain injury recovery prediction by harmonizing real brain CT and synthetic brain MRI: a pilot study.

Journal: Brain communications

Authors' code: SoloChe/TBI-Recovery-Prediction-Harmonization (no license)

Status: code verified, 38 files readable, 2 matches

[5317] Code ↔ Paper doi:10.1162/imag.a.1198 [paper, repository]

MEPrep: A robust pipeline for multi-echo fMRI denoising and preprocessing.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: zswang-brainimaging/MEPrep (no license)

Status: code verified, 99 files readable, 6 matches

[5318] doi:10.1186/s12888-026-07934-0 [paper, data]

Disgust-reduction evaluative conditioning (DREC) and tDCS in contamination-based OCD: a randomized controlled trial.

Journal: BMC psychiatry

Status: data only, 1 dataset cited

[5319] Code ↔ Paper doi:10.1186/s12911-026-03460-x [paper, repository]

Latent pain class identification, longitudinal transitions, and machine learning prediction of incident low back pain in middle-aged and older Chinese adults.

Journal: BMC medical informatics and decision making

Authors' code: vizhub.healthdata.org/gbd-results (no license)

Status: code verified

[5320] doi:10.1186/s13195-026-02030-7 [paper, data]

Moderating role of executive function in the relationship between specific white matter changes and long-term delayed recall in aMCI patients.

Journal: Alzheimer's research & therapy

Status: data only, 1 dataset cited

[5321] Code ↔ Paper doi:10.1371/journal.pcbi.1014123 [paper, repository]

Subunit-specific behavioral modulation of sensory tuning in the visual cortex.

Journal: PLoS computational biology

Authors' code: Mlynarski-Group/behavioral-visual-tuning (no license)

Status: code verified, 2 files readable

[5322] doi:10.2196/78300 [paper, data]

Deep Learning for Content-Based Medical Image Retrieval in Picture Archiving and Communication Systems for Brain Tumor Detection: Algorithm Development and Validation.

Journal: JMIR medical informatics

Status: data only, 1 dataset cited

Sunday, 5 April 2026 (2 papers)

[5323] doi:10.1038/s41598-026-45845-y [paper, data]

Identification of natural FGFR3 inhibitor for glioma using integrated computational and microRNA regulatory analysis.

Journal: Scientific reports

Status: data only, 1 dataset cited

[5324] doi:10.1186/s13041-026-01300-7 [paper, data]

Hippocampal transcriptome profiling in a 22q11.2 deletion syndrome mouse model: comparison with human schizophrenia.

Journal: Molecular brain

Status: code on request, 7 datasets cited

Saturday, 4 April 2026 (16 papers)

[5325] Code ↔ Paper doi:10.1016/j.cnp.2026.03.007 [paper, repository]

The impact of Independent Component Analysis on TMS-evoked potentials: a within-subject comparison across motor and prefrontal areas.

Journal: Clinical neurophysiology practice

Authors' code: emiledangremont/TMS-EEG (no license)

Status: code verified, 3 files readable, 2 matches

[5326] Code ↔ Paper doi:10.1016/j.isci.2026.115604 [paper, repository]

FOXP1 is differentially active during development of murine vasopressin and oxytocin magnocellular neurons.

Journal: iScience

Authors' code: jberkh/2025_Avp_Oxt_Diff (no license)

Status: code verified, 19 files readable, 17 matches

[5327] doi:10.1016/j.redox.2026.104155 [paper]

Ferroptosis-related mechanisms in prion diseases provide insights into neurodegeneration and reveal therapeutic implications.

Journal: Redox biology

Status: data only

[5328] Code ↔ Paper doi:10.1038/s41380-026-03578-4 [paper, repository]

Assessing molecular gene by treatment interactions using a population of neural progenitors exposed to valproic acid and lithium.

Journal: Molecular psychiatry

Authors' code: steinlabunc/clinical_rqtls (no license)

Status: code verified, 200 files readable, 20 matches

[5329] Code ↔ Paper doi:10.1038/s41467-026-71151-2 [paper, repository]

Common and distinct neural correlates of social interaction processing and theory of mind in narratives.

Journal: Nature communications

Authors' code: canlab/canlabcore (GPL-2.0), canlab/neuroimaging_pattern_masks (GPL-3.0), Zenodo 18315909 (MIT), canlab (no license), zizhuang-miao/miao2025_social-tom (MIT)

Status: code verified, 2,376 files readable, 9 matches

[5330] doi:10.1038/s41598-026-47035-2 [paper, data]

Propagation of electrical spike trains in substrates colonised by oyster fungi.

Journal: Scientific reports

Status: data only, 1 dataset cited

[5331] Code ↔ Paper doi:10.1038/s41746-026-02594-6 [paper, repository]

A neural-symbolic AI agent system for biomedical concept mapping.

Journal: NPJ digital medicine

Authors' code: ebmlab/MedicalConceptMapping (no license)

Status: code verified, 13 files readable, 3 matches

[5332] Code ↔ Paper doi:10.1038/s42003-026-09938-8 [paper, repository]

Representation Transfer via Invariant Input-driven Continuous Attractors for Fast Domain Adaptation.

Journal: Communications biology

Authors' code: Zenodo 16441066 (CC-BY-4.0)

Status: code verified

[5333] doi:10.1038/s42003-026-09951-x [paper, data]

Quantitative comparison of methods for widespread delivery of small molecules across the blood-brain barrier.

Journal: Communications biology

Status: data only, 1 dataset cited

[5334] Code ↔ Paper doi:10.1038/s42003-026-09990-4 [paper, repository]

Head stabilization behavior and underlying circuit mechanisms in larval zebrafish.

Journal: Communications biology

Authors' code: Zenodo 18832196 (CC-BY-4.0)

Status: code verified

[5335] doi:10.1038/s44319-026-00766-9 [paper]

Proteolytic cleavage of G3BP1 by calpain 1 couples NMDAR activation to mTOR-dependent local translation.

Journal: EMBO reports

Status: data only

[5336] Code ↔ Paper doi:10.1186/s13293-026-00891-z [paper, repository]

Sex differences in dynamic and static measures of brain integration derived from resting-state functional magnetic resonance imaging.

Journal: Biology of sex differences

Authors' code: Zenodo 4035081 (Apache-2.0), OSF 286fb (no license), OSF c3xvt (no license), OSF 6gswx (no license), OSF mu3st (no license), nipy/nipype (Apache-2.0)

Status: code verified, 2,721 files readable, 2 matches

[5337] Code ↔ Paper doi:10.1186/s40478-026-02286-y [paper, repository]

AI guided discovery of a murine model of asymptomatic Alzheimer's disease.

Journal: Acta neuropathologica communications

Authors' code: sahoo00/adnet](https: (no license)

Status: dead link

[5338] Code ↔ Paper doi:10.1186/s40478-026-02287-x [paper, repository]

Cellular signatures of melanocortin pathway genes across the locus coeruleus.

Journal: Acta neuropathologica communications

Authors' code: fmbetul/LC-melanocortin-analysis (MIT)

Status: code verified, 11 files readable, 27 matches

[5339] Code ↔ Paper doi:10.3390/e28040410 [paper, repository]

Intrinsic Cause-Effect Power: The Tradeoff Between Differentiation and Specification.

Journal: Entropy (Basel, Switzerland)

Authors' code: wmayner/intrinsic-information (no license)

Status: code verified, 8 files readable

[5340] doi:10.3390/s26072245 [paper, data]

An Intelligent Evaluation Algorithm for Pilot Flight Training Ability Based on Multimodal Information Fusion.

Journal: Sensors (Basel, Switzerland)

Status: data only, 3 datasets cited

Friday, 3 April 2026 (37 papers, 36 on this page)

[5341] Code ↔ Paper doi:10.1002/advs.202523984 [paper, repository]

INB<sup>3</sup>P: A Multi-Modal and Interpretable Co-Attention Framework Integrating Property-Aware Explanations and Memory-Bank Contrastive Fusion for Blood-Brain Barrier Penetrating Peptide Discovery.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Authors' code: EuclidLv/INB-P (no license), bioai-lab.com/inbp (no license)

Status: code verified, 15 files readable, 14 matches

[5342] Code ↔ Paper doi:10.1002/advs.75097 [paper, repository]

Remote Magnetomechanical Neuromodulation Uncovers Therapeutic Mechanisms for Alleviating Parkinsonian Symptoms in Freely Moving Mice.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Authors' code: spikeinterface.readthedocs.io (no license), Zenodo 18886278 (CC-BY-4.0), Zenodo 18886279 (CC-BY-4.0)

Status: code verified

[5343] doi:10.1016/j.isci.2026.115587 [paper]

Exploratory metabolomic profiling in migraine with PFO reveals dysregulated pathways and highlights indoleacrylic acid.

Journal: iScience

Status: code on request

[5344] doi:10.1016/j.jnha.2026.100836 [paper, data]

Accelerated biological aging and brain structural alterations linking air pollution to dementia risk: a prospective cohort study.

Journal: The journal of nutrition, health & aging

Status: data only, 1 dataset cited

[5345] doi:10.1016/j.omta.2026.201729 [paper]

Swine reporter model for preclinical evaluation and characterization of gene delivery vectors.

Journal: Molecular therapy. Advances

Status: code on request

[5346] doi:10.1038/s41398-026-04015-4 [paper]

Chemogenetic modulation of the prelimbic cortex to the nucleus accumbens core pathway reduces cocaine-induced increase of risk preference.

Journal: Translational psychiatry

Status: code on request

[5347] doi:10.1038/s41419-025-08391-5 [paper, data]

TMBIM6 enhances dopaminergic neuron survival by modulating the IRE1a pathway in Parkinson's disease.

Journal: Cell death & disease

Status: data only, 1 dataset cited

[5348] doi:10.1038/s41467-026-70469-1 [paper, data]

Circulating extracellular vesicle microRNAs mediate immune modulation of social behavior in male mice.

Journal: Nature communications

Status: data only, 1 dataset cited

[5349] doi:10.1038/s41467-026-71046-2 [paper, data]

Enhanced reward coding and condition-independent dynamics in optogenetically identified corticostriatal neurons in monkeys.

Journal: Nature communications

Status: code on request, 1 dataset cited

[5350] Code ↔ Paper doi:10.1038/s41467-026-71356-5 [paper, repository]

Generalization of fear learning is shaped by inhibitory sensory processing in mice.

Journal: Nature communications

Authors' code: Zenodo 18809357 (CC-BY-4.0), Zenodo 18809358 (CC-BY-4.0)

Status: code verified, 2 files readable

[5351] Code ↔ Paper doi:10.1038/s41467-026-71357-4 [paper, repository]

Social reward outcompetes drug seeking dopaminergic ensembles to prevent relapse.

Journal: Nature communications

Authors' code: zhoupc/CNMF_E (GPL-3.0), zivlab/CellReg (GPL-2.0), Zenodo 18279500 (CC-BY-4.0)

Status: code verified, 328 files readable, 1 match

[5352] Code ↔ Paper doi:10.1038/s41467-026-71426-8 [paper, repository]

Distinct modes of dopamine modulation on striatopallidal synaptic transmission.

Journal: Nature communications

Authors' code: Zenodo 18608880 (MIT), yelee03153/Striatopallidalsynapse (MIT)

Status: code verified, 122 files readable, 11 matches

[5353] Code ↔ Paper doi:10.1038/s41539-026-00419-5 [paper, repository]

Home numeracy experiences are associated with number-related brain activity and connectivity in early childhood.

Journal: NPJ science of learning

Authors' code: OSF vuar8 (no license), BBL-lab/BBL-batch-system (no license)

Status: code verified, 221 files readable, 6 matches

[5354] Code ↔ Paper doi:10.1038/s41539-026-00421-x [paper, repository]

Student teacher inter brain coupling forecast cross semester academic fluctuation in real world classrooms.

Journal: NPJ science of learning

Authors' code: cloud.tsinghua.edu.cn/d/6f6bed7043f844d69079 (no license)

Status: code verified

[5355] doi:10.1038/s41598-026-38002-y [paper]

Tsunami inversion using deep neural representations.

Journal: Scientific reports

Status: code on request

[5356] Code ↔ Paper doi:10.1038/s41598-026-42120-y [paper, repository]

Qualitative EEG abnormalities in ASD reflect inhibition-dominated brain dynamics.

Journal: Scientific reports

Authors' code: figshare 31634182 (MIT), rhardstone/fei](https: (no license)

Status: code verified, 10 files readable, 1 match

[5357] Code ↔ Paper doi:10.1038/s41598-026-45675-y [paper, repository]

Multi-class classification of brain tumor using a ResNet101 backbone integrated with multi-scale deformable attention module and advanced data augmentations.

Journal: Scientific reports

Authors' code: bathinisiddareddy-arch/siddareddy (no license)

Status: code verified, 1 file readable, 5 matches

[5358] doi:10.1038/s41598-026-47044-1 [paper, data]

MRI-based brain tumor prediction using convolutional neural network framework.

Journal: Scientific reports

Status: data only, 1 dataset cited

[5359] Code ↔ Paper doi:10.1038/s42003-026-09917-z [paper, repository]

Dynamic spatiotemporal features in action recognition: a multimodal study.

Journal: Communications biology

Authors' code: Zenodo 18978813 (CC-BY-4.0)

Status: code verified, 11 files readable, 12 matches

[5360] Code ↔ Paper doi:10.1038/s43587-026-01096-0 [paper, repository]

Neuronal APOE4-induced early hippocampal network hyperexcitability in Alzheimer's disease pathogenesis.

Journal: Nature aging

Authors' code: dtabuena/TabuenaJangGrone (no license)

Status: code verified, 1 file readable

[5361] Code ↔ Paper doi:10.1038/s43856-026-01555-0 [paper, repository]

Mechanistically driven transnidal hemodynamic manipulations enhance simulated endovascular transvenous treatments for brain AVMs.

Journal: Communications medicine

Authors' code: kellenvu/massoud-avm (no license)

Status: code verified, 2 files readable, 5 matches

[5362] Code ↔ Paper doi:10.1093/braincomms/fcag121 [paper, repository]

Anterior insular co-activation patterns associated with stress markers in chronic primary pain.

Journal: Brain communications

Authors' code: FND-ResearchGroup/CAP_in_CPP (no license)

Status: code verified, 7 files readable, 10 matches

[5363] doi:10.1126/sciadv.adz6495 [paper, data]

Pupil-linked arousal heterogeneously modulates cell-type-specific sensory processing.

Journal: Science advances

Status: data only, 1 dataset cited

[5364] Code ↔ Paper doi:10.1126/sciadv.aeb1134 [paper, repository]

Selective vulnerability of cerebral vasculature to <i>NOTCH3</i> variants in small vessel disease and rescue by phosphodiesterase-5 inhibitor.

Journal: Science advances

Authors' code: zhaoaite/ActinDetection (MIT), doi:10.5061/dryad.2280gb66p (no license)

Status: code verified, 5 files readable, 2 matches

[5365] doi:10.1128/msphere.00908-25 [paper, data]

Integrated bioinformatics analysis of the shared molecular mechanisms between Parkinson's disease and COVID-19.

Journal: mSphere

Status: data only, 1 dataset cited

[5366] doi:10.1159/000551068 [paper, data]

Associations between Body Composition Patterns, Brain Diseases and Injuries, and Risk of Epilepsy: A Prospective Cohort Study.

Journal: Neuroepidemiology

Status: data only, 1 dataset cited

[5367] Code ↔ Paper doi:10.1162/imag.a.1185 [paper, repository]

Musical groove listening does not enhance primary motor cortex activation.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: OSF fyq8d (no license)

Status: code verified, 60 files readable, 5 matches

[5368] doi:10.1162/imag.a.1193 [paper]

Linking local and large-scale salient events with oscillatory and broadband arrhythmic activities in the resting human brain.

Journal: Imaging neuroscience (Cambridge, Mass.)

Status: code on request

[5369] Code ↔ Paper doi:10.1186/s12880-026-02335-x [paper, repository]

Automatic lateral ventricle and choroid plexus segmentation method in infant brain MR images.

Journal: BMC medical imaging

Authors' code: jhkang0526/Infant_LVCPseg (no license), MIC-DKFZ/nnUNet (Apache-2.0)

Status: code verified, 238 files readable, 3 matches

[5370] doi:10.1186/s13578-026-01562-7 [paper, data]

Gordonibacter-associated regulatory T cell dysfunction and S100A11-mediated neural impairment in Hirschsprung's disease: a microbiota-immune-neural axis.

Journal: Cell & bioscience

Status: data only, 1 dataset cited

[5371] doi:10.1186/s40246-026-00956-5 [paper, data]

Rare variants in FAT3 as possible contributors to non-syndromic orofacial cleft risk.

Journal: Human genomics

Status: data only, 1 dataset cited

[5372] doi:10.1186/s40708-026-00299-w [paper, data]

Pipeline evaluation of a state-of-the-art AI algorithm for detection of focal cortical dysplasia: insights into potential failure sources.

Journal: Brain informatics

Status: code on request, 2 datasets cited

[5373] Code ↔ Paper doi:10.1371/journal.pcbi.1014022 [paper, repository]

Emergence of multifrequency activity in a laminar neural mass model.

Journal: PLoS computational biology

Authors' code: dsb-lab/LaNMM (CC0-1.0)

Status: code verified, 6 files readable

[5374] Code ↔ Paper doi:10.1371/journal.pcbi.1014162 [paper, repository]

Exploring neural manifolds across a wide range of intrinsic dimensions.

Journal: PLoS computational biology

Authors' code: JFadanni/ExploringNeuralManifolds (MIT)

Status: code verified, 18 files readable, 1 match

[5375] Code ↔ Paper doi:10.1371/journal.pone.0346132 [paper, repository]

Analysis of cortical dysplasias using b-tensor encoding diffusion MRI in an animal model.

Journal: PloS one

Authors' code: lconcha/Displasias (no license)

Status: code verified, 126 files readable, 1 match

[5376] doi:10.3390/biomimetics11040243 [paper, data]

A Novel Starfish Optimization Algorithm for Secure STAR-RIS Communications.

Journal: Biomimetics (Basel, Switzerland)

Status: data only, 1 dataset cited

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