Every paper, by date: page 25

44,644 papers with a page: 24,189 with their authors' code, 4,955 with code on request, 15,495 with data only. The most recent first, 224 a page. Page 25 of 200: 3 April 2026 to 31 March 2026.

Friday, 3 April 2026 (37 papers, 1 on this page)

[5377] doi:10.3390/ijms27073253 [paper, data]

S-equol Modulates T3-Induced Transcription and Neurite Outgrowth in Neuronal Cells.

Journal: International journal of molecular sciences

Status: data only, 1 dataset cited

Thursday, 2 April 2026 (37 papers)

[5378] doi:10.1002/exp2.70160 [paper, data]

<i>RBFOX1</i> Dysfunction Unlocks <i>APOE4</i>-Associated Microglial Genesis and Exacerbates Alzheimer's Pathology in Human Cerebral Organoids.

Journal: Exploration (Beijing, China)

Status: data only, 1 dataset cited

[5379] Code ↔ Paper doi:10.1007/s00366-026-02313-5 [paper, repository]

A computational framework to predict the spreading of Alzheimer's disease.

Journal: Engineering with computers

Authors' code: mechmat.web.ox.ac.uk/codes (no license)

Status: code verified

[5380] doi:10.1007/s12031-026-02506-z [paper, data]

Striatal Dysregulation of Angpt2 and Circadian Gene Expression in a Rotenone Rat Model of Parkinson's Disease.

Journal: Journal of molecular neuroscience : MN

Status: data only, 1 dataset cited

[5381] doi:10.1016/j.bpj.2026.03.061 [paper]

Clustering hinders APP α-secretase processing in the plasma membrane.

Journal: Biophysical journal

Status: code on request

[5382] Code ↔ Paper doi:10.1016/j.isci.2026.115564 [paper, repository]

Octopamine regulates neural circuits in the mushroom body and central complex, influencing sleep and arousal.

Journal: iScience

Authors' code: Zenodo 18471737 (CC-BY-4.0), cgoina/pysolo-tools (GPL-3.0)

Status: code verified, 14 files readable

[5383] Code ↔ Paper doi:10.1016/j.isci.2026.115566 [paper, repository]

Virtual social interaction reveals that the dorsal habenula-IPN pathway is essential for targeting the opponent.

Journal: iScience

Authors' code: Zenodo 16809628 (CC-BY-4.0)

Status: code verified

[5384] Code ↔ Paper doi:10.1016/j.isci.2026.115575 [paper, repository]

Cyphers and cycles - A chemical basis of the differential attraction of mosquitoes to human odor.

Journal: iScience

Authors' code: ellis/gcead (no license)

Status: code verified, 369 files readable

[5385] Code ↔ Paper doi:10.1016/j.stemcr.2026.102872 [paper, repository]

A semi-automated MEA spike sorting method for high-throughput assessment of cultured neurons.

Journal: Stem cell reports

Authors' code: Zhao-Lab-UW/SAMS-Semi-Automatic-MEA-Spike-sorting-pipeline- (MIT)

Status: code verified, 76 files readable, 5 matches

[5386] Code ↔ Paper doi:10.1021/acsomega.6c01637 [paper, repository]

Exploring the Interactive Effect of Pectins from <i>Campomanesia xanthocarpa</i> with Galectin‑3.

Journal: ACS omega

Authors' code: rcsb.org/structure/9d62 (no license), rcsb.org/structure/9d63 (no license), rcsb.org/structure/9d64 (no license)

Status: code verified

[5387] doi:10.1038/s41380-026-03560-0 [paper, data]

Optimized multichannel 4 mA vs conventional transcranial direct current stimulation for major depressive disorder: A randomized sham-controlled trial.

Journal: Molecular psychiatry

Status: data only, 1 dataset cited

[5388] doi:10.1038/s41398-026-03996-6 [paper]

Fear learning in unmedicated patients with anxiety disorders: a comparison of delay conditioning, fear reversal, and trace conditioning.

Journal: Translational psychiatry

Status: code on request

[5389] doi:10.1038/s41467-026-71289-z [paper, data]

Descending inhibitory rostral ventromedial medulla neurons cause widespread antinociception and contribute to the pain-inhibits-pain phenomenon.

Journal: Nature communications

Status: data only, 1 dataset cited

[5390] Code ↔ Paper doi:10.1038/s41467-026-71360-9 [paper, repository]

Perinatal brain developmental transition revealed by transcriptomic and proteomic analyses of Bama miniature pigs.

Journal: Nature communications

Authors' code: lmfeng/PBAtlas_Perinatal_Multiome (no license)

Status: code verified, 8 files readable, 15 matches

[5391] Code ↔ Paper doi:10.1038/s41592-026-03057-2 [paper, repository]

CREsted: modeling genomic and synthetic cell-type-specific enhancers across tissues and species.

Journal: Nature methods

Authors' code: aertslab/CREsted (other), aertslab/create_cisTarget_databases (no license), Zenodo 17791463 (CC-BY-4.0), aertslab/CREsted-paper (MIT), Zenodo 17791384 (CC-BY-4.0), Zenodo 17202107 (MIT), aertslab/tf-mindi (other)

Status: code verified, 258 files readable, 40 matches

[5392] Code ↔ Paper doi:10.1038/s41598-026-45824-3 [paper, repository]

Solving multi-depot closed-path multiple traveling salesman problem using k-means++ hierarchical clustering and neural combinatorial networks.

Journal: Scientific reports

Authors' code: Zhao-Chunsheng/MDCP-MTSP-KHC-NCN (no license), wouterkool/attention-learn-to-route (MIT), yd-kwon/POMO (no license), fikisipi/elkai (other)

Status: code verified, 373 files readable, 8 matches

[5393] Code ↔ Paper doi:10.1038/s41598-026-46182-w [paper, repository]

How the influence of cingulate-lingual interactions on event segmentation changes from early to late adolescence.

Journal: Scientific reports

Authors' code: OSF 4q7sc (no license)

Status: code verified, 29 files readable, 10 matches

[5394] Code ↔ Paper doi:10.1038/s41598-026-46512-y [paper, repository]

Glucose-driven intra- and inter-islet beta cell synchronization in pancreatic tissue slices.

Journal: Scientific reports

Authors' code: MarkoSterk/beta_cell_analysis_suite (MIT)

Status: code verified, 28 files readable

[5395] Code ↔ Paper doi:10.1038/s42003-026-09955-7 [paper, repository]

Gestational choline supplementation regulates hippocampal granule neuron development and emotion-like behavior.

Journal: Communications biology

Authors' code: FelixKrueger/TrimGalore (GPL-3.0)

Status: code verified, 31 files readable

[5396] doi:10.1093/braincomms/fcag117 [paper, data]

Connectome disruptions after hypoxic-ischaemic injury associate with consciousness disorder severity.

Journal: Brain communications

Status: data only, 1 dataset cited

[5397] Code ↔ Paper doi:10.1093/braincomms/fcag120 [paper, repository]

The heartbeat evoked potential and the prediction of functional seizure semiology.

Journal: Brain communications

Authors' code: ClinicalAffectiveNeuroscienceLab/HEPPy (MIT)

Status: code verified, 6 files readable

[5398] doi:10.1155/humu/4033506 [paper, data]

SELL Marks an Effector-Deficient CD8<sup>+</sup> T Cell Subset That Promotes Intracerebral Hemorrhage and Responds to Rutin Therapy.

Journal: Human mutation

Status: data only, 1 dataset cited

[5399] doi:10.1162/imag.a.1109 [paper]

Simultaneous tDCS-fMRI reveals limited and inconsistent changes in functional connectivity: Insights from a temporal dynamics study.

Journal: Imaging neuroscience (Cambridge, Mass.)

Status: code on request

[5400] Code ↔ Paper doi:10.1162/imag.a.1174 [paper, repository]

Retinal nerve fibre layer thickness reflects characteristics of brain grey and white matter.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: n-ayyildiz/EyeBrain_project (no license)

Status: code verified, 27 files readable, 8 matches

[5401] doi:10.1162/imag.a.1195 [paper]

Age-dependent diffusion-relaxation coupling in the basal ganglia: Implications for iron deposition and microstructural dynamics.

Journal: Imaging neuroscience (Cambridge, Mass.)

Status: code on request

[5402] doi:10.1172/jci196112 [paper, data]

Aging-dependent microglial heterogeneity worsens outcomes in models of traumatic brain injury.

Journal: The Journal of clinical investigation

Status: data only, 1 dataset cited

[5403] doi:10.1186/s10020-026-01471-y [paper, data]

Modest rescue of RBFOX1 splicing function attenuates Huntington's disease features.

Journal: Molecular medicine (Cambridge, Mass.)

Status: data only, 3 datasets cited

[5404] doi:10.1186/s10194-026-02354-7 [paper, data]

DNA methylation signatures of treatment response in medication-overuse headache.

Journal: The journal of headache and pain

Status: data only, 1 dataset cited

[5405] doi:10.1186/s11689-026-09686-0 [paper, data]

Mis-spliced FMR1 transcripts in human fragile X syndrome neural progenitors and neurons.

Journal: Journal of neurodevelopmental disorders

Status: data only, 1 dataset cited

[5406] Code ↔ Paper doi:10.1186/s13321-026-01177-7 [paper, repository]

A pipeline for developing AI-driven models to predict molecular initiating events: a case study on neural tube defects.

Journal: Journal of cheminformatics

Authors' code: MerelFlorian/NeuroTox-KPGT (Apache-2.0)

Status: code verified, 48 files readable, 16 matches

[5407] Code ↔ Paper doi:10.1371/journal.pbio.3003666 [paper, repository]

Emotion regulation success involves systematic gradient-based reconfigurations of large-scale activation patterns in the human brain.

Journal: PLoS biology

Authors' code: OSF yk85c (no license)

Status: code verified, 5 files readable, 2 matches

[5408] doi:10.1371/journal.pone.0345287 [paper, data]

Directional leads applied to spinal cord stimulation: A computational modelling study.

Journal: PloS one

Status: data only, 1 dataset cited

[5409] doi:10.1371/journal.pone.0345470 [paper, data]

Physics-informed graph neural networks for robust cross-patient epileptic seizure prediction via chimera state detection.

Journal: PloS one

Status: data only, 2 datasets cited

[5410] Code ↔ Paper doi:10.3389/fnagi.2026.1771822 [paper, repository]

Neuroanatomical patterns of dementia risk in autism spectrum disorder.

Journal: Frontiers in aging neuroscience

Authors' code: james-cole/brainageR (LGPL-3.0)

Status: code verified, 9 files readable, 1 match

[5411] doi:10.3389/fpsyt.2026.1796599 [paper, data]

Cerebellar dysconnectivity in schizophrenia spectrum: task-based functional connectivity analysis and cognitive stratification.

Journal: Frontiers in psychiatry

Status: data only, 1 dataset cited

[5412] doi:10.3390/bios16040203 [paper, data]

Multiscale Cosine Convolution Neural Network for Robust and Interpretable Epileptic EEG Detection.

Journal: Biosensors

Status: data only, 1 dataset cited

[5413] doi:10.3758/s13415-026-01436-y [paper]

Neural correlates of asymmetric switch costs during affective task switching.

Journal: Cognitive, affective & behavioral neuroscience

Status: code on request

[5414] Code ↔ Paper doi:10.64898/2026.04.01.26349523 [paper, repository]

Developmental brain age gap in prematurity and postnatally emerging delay in congenital heart disease

Journal: medRxiv (preprint)

Authors' code: Mishakaan-dorp/Developmental-brain-age-estimation (no license)

Status: dead link

Wednesday, 1 April 2026 (172 papers)

[5415] Code ↔ Paper doi:10.1002/acm2.70560 [paper, repository]

Hybrid CNN-GCN framework for brain tumor MRI classification: A graph-based approach to smart healthcare diagnostics.

Journal: Journal of applied clinical medical physics

Authors' code: kaggle.com/code/araraltawil (no license)

Status: dead link

[5416] doi:10.1002/alz.71232 [paper, data]

Neural embedding of frailty in cognitively unimpaired aging and dementia across Latin America.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Status: data only, 1 dataset cited

[5417] Code ↔ Paper doi:10.1002/alz.71271 [paper, repository]

Intracellular protein GBF1 displays significant associations with amyloid pathology in Alzheimer's disease.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: chapmanb/bcbio-nextgen (MIT)

Status: code verified, 318 files readable, 1 match

[5418] Code ↔ Paper doi:10.1002/alz.71273 [paper, repository]

Proteomic profiling of brain organoids and extracellular vesicles identifies early Alzheimer's disease biomarkers and drug response heterogeneity.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: daiyundong/Machairaki_2025_EV_Organoid_Proteomics (MIT)

Status: code verified, 4 files readable, 4 matches

[5419] Code ↔ Paper doi:10.1002/alz.71337 [paper, repository]

Tracking tau and cellular responses in human iPSC-microglia: from uptake to seedable secretion, including in extracellular vesicles.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: s-washer/karabova_2025_tracking_tau_and_cellular_responses_in_microglia_rnaseq (MIT)

Status: code verified, 5 files readable, 6 matches

[5420] Code ↔ Paper doi:10.1002/alz.71343 [paper, repository]

Health system patterns of imaging and fluid biomarker testing in the era of anti-amyloid therapies.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: RadGenLab/AmyloidVolume (no license)

Status: dead link

[5421] Code ↔ Paper doi:10.1002/alz.71365 [paper, repository]

Benchmarking speech biomarkers of Alzheimer's against cognitive and neural measures.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: OSF ad8jb (no license)

Status: code verified, 4 files readable, 1 match

[5422] Code ↔ Paper doi:10.1002/alz.71366 [paper, repository]

Divergent patterns of cognitive decline in preclinical Alzheimer's disease: Implications for secondary prevention trials.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: atri-biostats/a4learn (no license)

Status: code verified, 9 files readable, 14 matches

[5423] doi:10.1002/alz.71378 [paper, data]

Human iPSC-derived GABAergic interneuron transplantation restores circuit balance and cognitive function in an Alzheimer's disease model.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Status: data only, 1 dataset cited

[5424] Code ↔ Paper doi:10.1002/alz.71399 [paper, repository]

Mixture of organic pollutants is associated with cognitive aging.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Authors' code: vrindakalia/chemicals_and_reference_abilities (no license)

Status: code verified, 24 files readable, 9 matches

[5425] doi:10.1002/alz.71411 [paper, data]

Risk factors underlying brain structure change rate in cognitive decline: Results from genomewide and phenomewide investigations.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Status: data only, 1 dataset cited

[5426] doi:10.1002/alz.71433 [paper, data]

Genetic correlation analysis of Alzheimer's disease and stroke implicates PHLPP1 as a shared locus in individuals of African ancestry.

Journal: Alzheimer's & dementia : the journal of the Alzheimer's Association

Status: data only, 1 dataset cited

[5427] doi:10.1002/aur.70243 [paper]

Autism and Cortical Thickness Deviation From Neurotypical Controls: Evidence for a Spatial Association With Serotonin Receptors.

Journal: Autism research : official journal of the International Society for Autism Research

Status: code on request

[5428] doi:10.1002/brb3.71293 [paper]

EEG-Based Multifocal Tomographic Neurofeedback in Older Individuals With Chronic Tinnitus Does Not Lead to Persistent Electrophysiological Changes.

Journal: Brain and behavior

Status: code on request

[5429] doi:10.1002/brb3.71339 [paper]

Altered Dynamic Functional Connectivity of the Frontoparietal Network in Major Depressive Disorder: Evidence From a Large-Scale Resting-State fMRI Study.

Journal: Brain and behavior

Status: code on request

[5430] doi:10.1002/brb3.71358 [paper, data]

Willingness to Undergo Brain Health Testing and Motivation for Lifestyle Changes: Insights From a Survey of the Cuban Population.

Journal: Brain and behavior

Status: data only, 2 datasets cited

[5431] doi:10.1002/brb3.71363 [paper]

Brain Functional Connectivity as a Mediator Between Hematological Metrics and Cognitive Decline in Children With Beta-thalassemia Major.

Journal: Brain and behavior

Status: code on request

[5432] doi:10.1002/brb3.71366 [paper]

Integrative Multi-Omics Mendelian Randomization Highlights Causal Autophagy-Related Genes for Amyotrophic Lateral Sclerosis.

Journal: Brain and behavior

Status: code on request

[5433] Code ↔ Paper doi:10.1002/brb3.71376 [paper, repository]

Neurofunctional Correlates of Emotional Dysregulation: Systematic Review and ALE Meta-Analysis.

Journal: Brain and behavior

Authors' code: ErnWg/minBayes_ALE (no license), neurosynth/neurosynth (MIT)

Status: code verified, 39 files readable, 3 matches

[5434] doi:10.1002/brb3.71425 [paper]

Effect of Transcranial Direct Current Stimulation Targeting Brain Regions Identified Through Voxel-Based Morphometry on One-Legged Standing Balance With Eyes Closed.

Journal: Brain and behavior

Status: code on request

[5435] doi:10.1002/cns.70834 [paper]

Wnt5a-Induced Exosomes From Bone Marrow Mesenchymal Stem Cells Promote Spinal Cord Injury Repair by Modulating Immune Cell Phenotypes and Alleviating Neuroinflammation via the NF-κB Pathway.

Journal: CNS neuroscience & therapeutics

Status: data only

[5436] doi:10.1002/cns.70860 [paper, data]

RFWD2 Mitigates AD-Like Cognitive Impairments via the JNK-SGK1 Signaling Pathway in Mice.

Journal: CNS neuroscience & therapeutics

Status: data only, 1 dataset cited

[5437] doi:10.1002/cns.70872 [paper, data]

The Small Molecule Compound Eupalinolide B Ameliorates Depressive Behaviors and Neuropathic Pain in Mice With Spared Nerve Injury: Integrating Network Pharmacology, Molecular Docking, Bioinformatics, Molecular Dynamics Simulation and Experimental Verification.

Journal: CNS neuroscience & therapeutics

Status: data only, 24 datasets cited

[5438] doi:10.1002/ctm2.70674 [paper, data]

Physical exercise mitigates chronic psychological stress-induced vascular inflammation via the BDNF-Kif4-TARM1 axis.

Journal: Clinical and translational medicine

Status: data only, 1 dataset cited

[5439] Code ↔ Paper doi:10.1002/dad2.70360 [paper, repository]

Investigating the amyloid-tau-neurodegeneration framework in Alzheimer's disease using semi-supervised multimodal imaging data fusion.

Journal: Alzheimer's & dementia (Amsterdam, Netherlands)

Authors' code: ANSR-laboratory/SuperBigFLICA_McL (MIT)

Status: code verified, 13 files readable, 1 match

[5440] Code ↔ Paper doi:10.1002/dad2.70366 [paper, repository]

Redefining the norms: an interdisciplinary perspective on language testing in multilinguals with acquired and progressive neurogenic disorders.

Journal: Alzheimer's & dementia (Amsterdam, Netherlands)

Authors' code: TalkBank/batchalign2 (BSD-3-Clause)

Status: code verified, 147 files readable, 1 match

[5441] Code ↔ Paper doi:10.1002/dneu.70019 [paper, repository]

A Longitudinal Study of Children's Hippocampal Development: Investigating Maternal Physical Activity, Depression, and Education.

Journal: Developmental neurobiology

Authors' code: OSF z82pu (no license)

Status: empty repository

[5442] doi:10.1002/dneu.70027 [paper, data]

The Intriguingly Social N400 of Preverbal Infants.

Journal: Developmental neurobiology

Status: data only, 1 dataset cited

[5443] Code ↔ Paper doi:10.1002/hbm.70425 [paper, repository]

Brain Age Estimation on T2-FLAIR Scans for Application to Multiple Sclerosis.

Journal: Human brain mapping

Authors' code: jordan-colman/FLAIR-Brain-Age (MIT)

Status: code verified, 25 files readable, 2 matches

[5444] Code ↔ Paper doi:10.1002/hbm.70491 [paper, repository]

Multi-Centre Reproducibility of DTI and NODDI in White Matter Tracts Segmented Using TractFinder Across Three MRI Scanners of the Same Model.

Journal: Human brain mapping

Authors' code: aga-sierhej/inter_scanner_reproducibility (no license)

Status: code verified, 1 file readable

[5445] Code ↔ Paper doi:10.1002/hbm.70493 [paper, repository]

Testing for Network Specificity in Brain-Behavior Associations Using Ordinal Dominance Curves.

Journal: Human brain mapping

Authors' code: smweinst/NEST (no license), Nhillman19/NETDOM (no license)

Status: code verified, 27 files readable, 5 matches

[5446] Code ↔ Paper doi:10.1002/hbm.70496 [paper, repository]

Transdiagnostic Profiles of BOLD Signal Variability in Autism and Schizophrenia Spectrum Disorders: Associations With Cognition and Functioning.

Journal: Human brain mapping

Authors' code: tsecara/BOLD_signal_variability_Autism_Schizophrenia_TDC (no license)

Status: code verified, 11 files readable, 4 matches

[5447] Code ↔ Paper doi:10.1002/hbm.70506 [paper, repository]

Revisiting Amplitude of Low-Frequency Fluctuations (ALFF) in Resting-State fMRI: Clarifications and Improvements.

Journal: Human brain mapping

Authors' code: lejianhuang/ALFF (no license)

Status: code verified, 1 file readable

[5448] Code ↔ Paper doi:10.1002/hbm.70508 [paper, repository]

Cyclic 2.5D Perceptual Loss for Cross-Modal 3D Medical Image Synthesis: T1w MRI to Tau PET.

Journal: Human brain mapping

Authors' code: labhai/Cyclic-2.5D-Perceptual-Loss (no license)

Status: code verified, 6 files readable, 3 matches

[5449] doi:10.1002/hbm.70511 [paper]

Contributions of Gray Matter Microstructure to Differences in Fluid Cognition and Episodic Memory Across the Healthy Adult Lifespan.

Journal: Human brain mapping

Status: code on request

[5450] Code ↔ Paper doi:10.1002/hbm.70512 [paper, repository]

Precision Imaging for Intraindividual Investigation of the Reward Response.

Journal: Human brain mapping

Authors' code: DVS-Lab/night-owls (MIT)

Status: code verified, 164 files readable, 7 matches

[5451] Code ↔ Paper doi:10.1002/hbm.70513 [paper, repository]

Deep Learning Empowered Microstructure Codebook: New Paradigm for Multi-Parameter Tissue Characterization Estimation.

Journal: Human brain mapping

Authors' code: 1nlandempire/Microstructure-codebook-imaging (no license)

Status: code verified, 6 files readable, 3 matches

[5452] Code ↔ Paper doi:10.1002/hbm.70516 [paper, repository]

Effects of Age on Resting-State Cortical Networks.

Journal: Human brain mapping

Authors' code: OHBA-analysis/Gohil2025_AgeEffectsRSNs (no license), Zenodo 6875060 (BSD-3-Clause)

Status: code verified, 96 files readable, 12 matches

[5453] doi:10.1002/hbm.70518 [paper, data]

Voluntary Attention Selectively Modulates Omission Responses.

Journal: Human brain mapping

Status: data only, 1 dataset cited

[5454] doi:10.1002/hbm.70520 [paper, data]

Bridging Histology and Tractography: First In Vivo Visualization of Short-Range Prefrontal Connections Informed by Primate Tract-Tracing.

Journal: Human brain mapping

Status: data only, 1 dataset cited

[5455] Code ↔ Paper doi:10.1002/hbm.70522 [paper, repository]

Investigating Emotional Reactivity in Experienced Users of Psychedelics: A Cross-Sectional fMRI Study.

Journal: Human brain mapping

Authors' code: OSF 46gmu (no license)

Status: code verified, 1 file readable, 2 matches

[5456] Code ↔ Paper doi:10.1002/hbm.70525 [paper, repository]

Spatial Entropy of Brain Network Landscapes: A Novel Method to Assess Spatial Disorder in Brain Networks.

Journal: Human brain mapping

Authors' code: rlyday/brain-network-spatial-entropy (no license)

Status: code verified, 1 file readable

[5457] Code ↔ Paper doi:10.1002/hbm.70526 [paper, repository]

Resting-State and Task Functional Magnetic Resonance Imaging Network Topology Metrics With no Threshold Selection to Predict Cognition.

Journal: Human brain mapping

Authors' code: chabld/Topology_study_2025 (no license)

Status: code verified, 12 files readable, 13 matches

[5458] Code ↔ Paper doi:10.1002/hbm.70528 [paper, repository]

Explainable AI Insights Into EEG Classification and Its Alignment to Neural Correlates.

Journal: Human brain mapping

Authors' code: hendrik-eilts/XAI-EEGNet (no license)

Status: code verified, 38 files readable, 12 matches

[5459] Code ↔ Paper doi:10.1002/hbm.70534 [paper, repository]

Longitudinal Multimodal Neuroimaging After Traumatic Brain Injury.

Journal: Human brain mapping

Authors' code: anaradanovic/MultiMod_TBI (no license)

Status: code verified, 27 files readable

[5460] Code ↔ Paper doi:10.1002/hbm.70536 [paper, repository]

The Neural Processes Underpinning Flexible Semantic Retrieval in Visual and Auditory Modalities.

Journal: Human brain mapping

Authors' code: OSF swzvr (no license)

Status: code verified, 1 file readable, 1 match

[5461] Code ↔ Paper doi:10.1002/jbio.70260 [paper, repository]

Cell-MICS: Detecting Immune Cells With Label-Free Two-Photon Autofluorescence and Deep Learning.

Journal: Journal of biophotonics

Authors' code: lucaskreiss/multiphoton_imaging_with_computational_specificity (MIT)

Status: code verified, 16 files readable, 9 matches

[5462] Code ↔ Paper doi:10.1002/mp.70419 [paper, repository]

Comparing deep learning stroke segmentation in NCCT, CTA, and CTP: Accuracy, domain transfer, and temporal sampling effect.

Journal: Medical physics

Authors' code: ac74esiw/stroke_segmentation (no license)

Status: code verified, 2 files readable, 1 match

[5463] Code ↔ Paper doi:10.1002/trc2.70257 [paper, repository]

Blood DNA methylation signature of cognitive reserve moderates the association between CSF tau pathology and memory in prodromal Alzheimer's disease.

Journal: Alzheimer's & dementia (New York, N. Y.)

Authors' code: TransBioInfoLab/ad-cr (MIT)

Status: code verified, 42 files readable, 9 matches

[5464] Code ↔ Paper doi:10.1002/trc2.70264 [paper, repository]

Single-subject proteomic signatures in Alzheimer's disease reflect clinical phenotypes and distinguish asymptomatic from symptomatic cases.

Journal: Alzheimer's & dementia (New York, N. Y.)

Authors' code: avijitpodder-ap.github.io/ssproteomics-workflow (no license), avijitpodder-AP/ssproteomics-workflow (no license)

Status: code verified, 1 file readable

[5465] Code ↔ Paper doi:10.1002/trc2.70278 [paper, repository]

A combination of ketones and NAD<sup>+</sup> precursor preserves white matter integrity in mild cognitive impairment.

Journal: Alzheimer's & dementia (New York, N. Y.)

Authors' code: scilus/rbx_flow (MIT)

Status: empty repository, 2 files readable

[5466] Code ↔ Paper doi:10.1007/s10827-026-00927-8 [paper, repository]

Resolving non-identifiability mitigates systematic errors in simultaneous models of neural tuning and functional coupling.

Journal: Journal of computational neuroscience

Authors' code: BouchardLab/neuroerrors (no license)

Status: dead link

[5467] Code ↔ Paper doi:10.1007/s12021-025-09759-w [paper, repository]

Limitations of Variational Laplace-Based Dynamic Causal Modelling for Multistable Cortical Circuits.

Journal: Neuroinformatics

Authors' code: asadpouretal/DCM_Multistabilityor (GPL-3.0)

Status: code verified, 122 files readable, 8 matches

[5468] Code ↔ Paper doi:10.1016/j.cpblue.2026.100007 [paper, repository]

An integrated single-cell and spatial proteotranscriptomics atlas of fibroblast-driven immunoregulation within the human adult oral cavity.

Journal: Cell press blue

Authors' code: cellgeni/reprocess_public_10x (GPL-3.0), cellgeni/STARsolo (GPL-3.0), ventolab/CellphoneDB (MIT), saeyslab/multinichenetr (GPL-3.0), Loci-lab/Oral-Craniofacial-Atlas (no license), Zenodo 18474758 (CC-BY-4.0)

Status: code verified, 181 files readable, 11 matches

[5469] Code ↔ Paper doi:10.1016/j.ijchp.2026.100699 [paper, repository]

Sensory modality affects emotional dimension perception and frontoparietal brain responses.

Journal: International journal of clinical and health psychology : IJCHP

Authors' code: k-brainnet.kbri.re.kr (no license)

Status: code verified

[5470] doi:10.1016/j.ijchp.2026.100712 [paper, data]

Exercise-related changes in depressive symptoms and their association with anterior cingulate cortical thickness.

Journal: International journal of clinical and health psychology : IJCHP

Status: data only, 1 dataset cited

[5471] Code ↔ Paper doi:10.1016/j.ijchp.2026.100713 [paper, repository]

Capturing the multimodal dynamics of acute stress responses: Evidence from the Montreal Imaging Stress Task (MIST).

Journal: International journal of clinical and health psychology : IJCHP

Authors' code: ElioS-S/pupil-size (GPL-3.0)

Status: code verified, 17 files readable

[5472] doi:10.1016/j.isci.2026.115324 [paper]

The GPCR Smoothened on cholinergic interneurons modulates dopamine-associated acetylcholine dynamics, learning, and effort management.

Journal: iScience

Status: code on request

[5473] Code ↔ Paper doi:10.1016/j.isci.2026.115488 [paper, repository]

An integrated <i>i</i> <i>n vitro</i> platform and biophysical modeling approach for studying synaptic transmission in isolated neuronal pairs.

Journal: iScience

Authors' code: altiki/TE_code (no license), altiki/cmos_toolbox_w_spike_sorter (no license), gitlab.ethz.ch/vvasiliau/single_synapse (no license)

Status: code verified, 284 files readable, 13 matches

[5474] Code ↔ Paper doi:10.1016/j.isci.2026.115552 [paper, repository]

Physical and cognitive contributions to fatigue perception: The interplay between local muscle fatigue and sensory prediction error.

Journal: iScience

Authors' code: OSF pycxr (no license)

Status: code verified, 19 files readable

[5475] doi:10.1016/j.isci.2026.115554 [paper, data]

Computationally guided discovery of Ly6e/LY6E-dependent AAV capsid variants.

Journal: iScience

Status: code on request, 3 datasets cited

[5476] doi:10.1016/j.omtn.2026.102922 [paper, data]

Vacuolar ATPase subunit Atp6v0c transgene promotes neuroprotection and long-distance axon regeneration in injured retinal ganglion neurons.

Journal: Molecular therapy. Nucleic acids

Status: code on request, 1 dataset cited

[5477] doi:10.1016/j.xcrm.2026.102700 [paper]

Checkpoint blockade-related CNS adverse events are characterized by neurotoxic T helper cells with sustained neuroantigen reactivity.

Journal: Cell reports. Medicine

Status: code on request

[5478] doi:10.1016/j.xpro.2026.104469 [paper]

Protocol for monitoring cytoplasmic Ca<sup>2+</sup> dynamics using Fura Red-AM on a Zeiss Axio Observer microscope.

Journal: STAR protocols

Status: code on request

[5479] doi:10.1038/s41380-026-03576-6 [paper]

Sex-specific neurodevelopmental pathways to depressive symptoms.

Journal: Molecular psychiatry

Status: code on request

[5480] Code ↔ Paper doi:10.1038/s41398-026-03965-z [paper, repository]

Disentangling individual heterogeneity reveals robust network and molecular signatures of major depressive disorder with suicidal ideation.

Journal: Translational psychiatry

Authors' code: juryxy/juspace (no license), UMDataScienceLab/LBMAM_perpca (no license), Diego999/pyGAT (MIT), Yunheng-Diao/Paper_Code (no license)

Status: code verified, 45 files readable, 3 matches

[5481] doi:10.1038/s41420-026-03084-0 [paper]

Brain metastases exhibit distinct spatial patterns of resident and infiltrating macrophages.

Journal: Cell death discovery

Status: code on request

[5482] Code ↔ Paper doi:10.1038/s41467-026-70989-w [paper, repository]

MIC-Drop-seq: scalable single-cell phenotyping of mutant vertebrate embryos.

Journal: Nature communications

Authors' code: clay-carey/MIC-Drop-seq (MIT), Zenodo 18615355 (MIT)

Status: code verified, 12 files readable, 20 matches

[5483] Code ↔ Paper doi:10.1038/s41467-026-71129-0 [paper, repository]

Sgk1 upregulation in hippocampus-projecting amygdala neurons underlies the delayed onset of PTSD-like avoidance behavior.

Journal: Nature communications

Authors' code: Zenodo 15009455 (CC-BY-4.0)

Status: code verified

[5484] doi:10.1038/s41467-026-71252-y [paper, data]

Genetic architecture of sleep in a genome wide association study of device measured sleep traits.

Journal: Nature communications

Status: code on request, 1 dataset cited

[5485] Code ↔ Paper doi:10.1038/s41467-026-71267-5 [paper, repository]

Human-like cognitive generalization for large models via mental representation-guided supervision.

Journal: Nature communications

Authors' code: JxuanC/mental-representation-guided-learning (no license)

Status: code verified, 34 files readable, 7 matches

[5486] Code ↔ Paper doi:10.1038/s41467-026-71317-y [paper, repository]

TNF alpha unmasks enteric malate aspartate shuttle dysfunction bridging Parkinson disease and intestinal inflammation.

Journal: Nature communications

Authors' code: data.mendeley.com/datasets/v8dknj466y (no license)

Status: code verified

[5487] Code ↔ Paper doi:10.1038/s41514-026-00374-w [paper, repository]

Individual differences reveal distinct age-related reorganizations in spatial channels for luminance and texture processing.

Journal: npj aging

Authors' code: smin95.github.io/dataviz (no license)

Status: code verified

[5488] doi:10.1038/s41586-026-10290-4 [paper, data]

Expansion of outer cortical CUX2 neurons requires adaptations for DNA repair.

Journal: Nature

Status: data only, 1 dataset cited

[5489] doi:10.1038/s41586-026-10295-z [paper, data]

AhR inhibition promotes axon regeneration via a stress-growth switch.

Journal: Nature

Status: data only, 1 dataset cited

[5490] Code ↔ Paper doi:10.1038/s41586-026-10296-y [paper, repository]

Deconstruction of a spino-brain-spinal cord circuit that drives chronic pain.

Journal: Nature

Authors' code: sites.google.com/view/brain-mapping (no license), thepenglab/posTracker (no license)

Status: code verified, 8 files readable

[5491] Code ↔ Paper doi:10.1038/s41586-026-10299-9 [paper, repository]

A µ-opioid receptor superagonist analgesic with minimal adverse effects.

Journal: Nature

Authors' code: wdunne3/Calcium-Fiber-Photometry-Analysis (no license), BonaventuraLab/fiber-photometry (no license)

Status: code verified, 21 files readable, 2 matches

[5492] Code ↔ Paper doi:10.1038/s41586-026-10301-4 [paper, repository]

Dopaminergic mechanisms of dynamical social specialization.

Journal: Nature

Authors' code: Zenodo 17121126 (CC-BY-4.0)

Status: code verified, 10 files readable, 3 matches

[5493] Code ↔ Paper doi:10.1038/s41586-026-10310-3 [paper, repository]

DNA damage burden causes selective CUX2 neuron loss in neuroinflammation.

Journal: Nature

Authors' code: RowitchLab/Code_for_Cux2_Atf4_paper (no license)

Status: code verified, 14 files readable, 5 matches

[5494] Code ↔ Paper doi:10.1038/s41586-026-10312-1 [paper, repository]

Flexible ensheathment of axons enables myelination of complex CNS networks.

Journal: Nature

Authors' code: clcall/Call_ParanodalBridge_2022 (GPL-3.0)

Status: code verified, 56 files readable, 1 match

[5495] Code ↔ Paper doi:10.1038/s41586-026-10331-y [paper, repository]

Active dissociation of intracortical spiking and high gamma activity.

Journal: Nature

Authors' code: abidlabs/contrastive (MIT), caraido/spike-highgamma (CC-BY-4.0)

Status: code verified, 27 files readable, 6 matches

[5496] Code ↔ Paper doi:10.1038/s41586-026-10348-3 [paper, repository]

An enteric neuron ionotropic receptor regulates salt stress resistance.

Journal: Nature

Authors' code: venkatachalamlab/Yeon-2025-pumping-analysis (MIT), Zenodo 13748735 (CC-BY-4.0)

Status: code verified, 208 files readable

[5497] Code ↔ Paper doi:10.1038/s41593-026-02232-0 [paper, repository]

Entorhinal cortex represents task-relevant remote locations independently of CA1.

Journal: Nature neuroscience

Authors' code: emilyasterjones/X_maze (MIT), petersaj/AP_histology (GPL-3.0), emilyasterjones/ecephys_spike_sorting (BSD-2-Clause), jenniferColonell/ecephys_spike_sorting (BSD-2-Clause), emilyasterjones/bombcell (GPL-3.0), LorenFrankLab/track_linearization (MIT), Eden-Kramer-Lab/ripple_detection (MIT), emilyasterjones/AeryJones_2025 (GPL-3.0)

Status: code verified, 538 files readable, 19 matches

[5498] Code ↔ Paper doi:10.1038/s41597-026-07129-y [paper, repository]

Dataset of cortical and subcortical single neuron activity during value-based tasks in macaque monkey.

Journal: Scientific data

Authors' code: RudebeckLab/FlavorProba-dataset (no license)

Status: code verified, 7 files readable, 9 matches

[5499] doi:10.1038/s41598-026-41250-7 [paper, data]

Cross-domain multimodal learning for stress-level prediction: a hybrid deep learning framework integrating independent EEG and facial expression datasets.

Journal: Scientific reports

Status: data only, 1 dataset cited

[5500] Code ↔ Paper doi:10.1038/s41598-026-43301-5 [paper, repository]

Automated analysis of zebrafish vascular networks using the VISTA-Z pipeline.

Journal: Scientific reports

Authors' code: fishyvessels/VISTA-Z (MIT)

Status: code verified, 8 files readable, 6 matches

[5501] Code ↔ Paper doi:10.1038/s41598-026-45192-y [paper, repository]

Cortical firing dynamics during micro-arousals vary with sleep/wake history and micro-arousal duration.

Journal: Scientific reports

Authors' code: nhauglund/automatic-micro-arousal-detection (no license)

Status: empty repository, 1 file readable

[5502] doi:10.1038/s41598-026-45549-3 [paper, data]

Effects of single-session anodal transcranial direct current stimulation (tDCS) on cognitive and motor performance in athletes and healthy adults: a systematic review and meta-analysis.

Journal: Scientific reports

Status: data only, 1 dataset cited

[5503] Code ↔ Paper doi:10.1038/s41598-026-45990-4 [paper, repository]

Multi-platform profiling reveals host- and cell -type-specific pseudorabies virus gene expression.

Journal: Scientific reports

Authors' code: Balays/Rlyeh (MIT), Balays/VALAR-PRV-MDBIO-4cell (no license)

Status: code verified, 44 files readable

[5504] Code ↔ Paper doi:10.1038/s41598-026-46642-3 [paper, repository]

Joint MVMD-based optimal feature selection and FW-LS-TWSVM for motor imagery recognition.

Journal: Scientific reports

Authors' code: Luser-hub/FW-LS-TWSVM (no license)

Status: code verified, 24 files readable, 1 match

[5505] doi:10.1038/s41598-026-46657-w [paper, data]

ELF3 drives glioblastoma multiforme progression through the regulation of MXRA8 expression.

Journal: Scientific reports

Status: data only, 1 dataset cited

[5506] doi:10.1038/s42003-026-09915-1 [paper, data]

Single cell and spatial sequencing analysis of cancer associated fibroblasts in the brain metastasis tumor microenvironment.

Journal: Communications biology

Status: code on request, 1 dataset cited

[5507] Code ↔ Paper doi:10.1038/s42003-026-09923-1 [paper, repository]

Scalable discovery of spatial multicellular patterns via neighborhood-to-sequence transformation.

Journal: Communications biology

Authors' code: zhengli09/BASS-Analysis (no license), zhaofangyuan98/FDPMining (no license), Zenodo 18902032 (CC-BY-4.0)

Status: code verified, 63 files readable, 1 match

[5508] Code ↔ Paper doi:10.1038/s44319-026-00731-6 [paper, repository]

Multifaceted conserved functions of Notch during post-embryonic neurogenesis in the annelid Platynereis.

Journal: EMBO reports

Authors' code: StemDevEvo/Notch-2025 (no license), Zenodo 18341641 (CC-BY-4.0)

Status: code verified, 16 files readable, 3 matches

[5509] doi:10.1038/s44321-026-00400-0 [paper, data]

Tomatidine is a senotherapeutic compound that improves cognitive function and reduces cellular senescence in aged mice.

Journal: EMBO molecular medicine

Status: data only, 1 dataset cited

[5510] doi:10.1073/pnas.2516293123 [paper, data]

Distinct laminar origins of sensory-evoked high-gamma and low-frequency ECoG signals revealed by optogenetics.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Status: data only, 1 dataset cited

[5511] Code ↔ Paper doi:10.1093/bioinformatics/btag153 [paper, repository]

MAISNet: a multi-species integrated graph neural network for acetylcholinesterase inhibitor screening.

Journal: Bioinformatics (Oxford, England)

Authors' code: liangshengjie111/MAISNet (no license)

Status: code verified, 32 files readable, 4 matches

[5512] doi:10.1093/brain/awaf307 [paper, data]

Brain signatures of nociplastic pain: Fibromyalgia Index and descending modulation at population level.

Journal: Brain : a journal of neurology

Status: data only, 1 dataset cited

[5513] Code ↔ Paper doi:10.1093/brain/awaf375 [paper, repository]

Reference proteins to improve Core 1 and Core 2 Alzheimer's disease CSF and plasma biomarkers.

Journal: Brain : a journal of neurology

Authors' code: DeMONLab-BioFINDER/karlsson_refprot_normalization (no license)

Status: code verified, 4 files readable, 4 matches

[5514] Code ↔ Paper doi:10.1093/brain/awaf412 [paper, repository]

Multimodal multicentre investigation of diagnostic and prognostic markers in disorders of consciousness.

Journal: Brain : a journal of neurology

Authors' code: DraganaMana/multimod_doc (no license)

Status: code verified, 38 files readable, 4 matches

[5515] Code ↔ Paper doi:10.1093/braincomms/fcag116 [paper, repository]

Multi-level language deficits in behavioural frontotemporal degeneration and related disorders.

Journal: Brain communications

Authors' code: OSF bychj (no license)

Status: code verified, 4 files readable

[5516] Code ↔ Paper doi:10.1093/cercor/bhag034 [paper, repository]

Individual differences in adolescent cortical development are associated with neighborhood characteristics: Longitudinal findings from the ABCD study.

Journal: Cerebral cortex (New York, N.Y. : 1991)

Authors' code: OSF avu29 (no license)

Status: code verified, 5 files readable, 5 matches

[5517] Code ↔ Paper doi:10.1093/cercor/bhag040 [paper, repository]

BOLD response delays represent local cortical processing.

Journal: Cerebral cortex (New York, N.Y. : 1991)

Authors' code: kendrickkay.net/glmdenoise (no license), proulx-s/hrdelay (CC-BY-4.0), Zenodo 6568435 (CC-BY-4.0)

Status: code verified, 84 files readable, 3 matches

[5518] doi:10.1093/cercor/bhag041 [paper, data]

Pain suppresses corticospinal excitability, independent of tactile afferent inhibition.

Journal: Cerebral cortex (New York, N.Y. : 1991)

Status: data only, 1 dataset cited

[5519] Code ↔ Paper doi:10.1093/g3journal/jkag037 [paper, repository]

Visual recognition of the anteroposterior female body axis drives spatial elements of male courtship in Drosophila.

Journal: G3 (Bethesda, Md.)

Authors' code: Zenodo 18274754 (MIT), benshahary/drosophila-courtship (MIT)

Status: code verified, 130 files readable, 2 matches

[5520] Code ↔ Paper doi:10.1093/gbe/evag086 [paper, repository]

Genome Scans Reveal Species-Specific Selection in the Genus Lynx.

Journal: Genome biology and evolution

Authors' code: lorenalorenzo/selection_scan_lynx (no license)

Status: code verified, 5 files readable, 2 matches

[5521] doi:10.1093/geronb/gbag047 [paper, data]

Event-related potentials reveal age-related differences in sensitivity to positive and negative feedback from social and nonsocial sources.

Journal: The journals of gerontology. Series B, Psychological sciences and social sciences

Status: data only, 2 datasets cited

[5522] doi:10.1093/immhor/vlag015 [paper, data]

ZBP1 mediated restriction of Toxoplasma gondii in both the early acute and chronic brain stages of infection.

Journal: ImmunoHorizons

Status: data only, 1 dataset cited

[5523] Code ↔ Paper doi:10.1093/nar/gkag287 [paper, repository]

Divalent siRNA for prion disease.

Journal: Nucleic acids research

Authors' code: ericminikel/divalent (CC-BY-4.0), Zenodo 18960176 (CC-BY-4.0)

Status: code verified, 4 files readable, 14 matches

[5524] Code ↔ Paper doi:10.1093/nar/gkag294 [paper, repository]

Developmental stage dominates cell-type identity and reveals a chromatin regulatory function for Rad50 in Drosophila.

Journal: Nucleic acids research

Authors' code: ThomasBLMN/260611_transcriptomePaper (no license), Zenodo 18978512 (CC-BY-4.0)

Status: code verified, 9 files readable, 8 matches

[5525] Code ↔ Paper doi:10.1093/nar/gkag368 [paper, repository]

Single-cell trajectory inference for detecting transient events in biological processes.

Journal: Nucleic acids research

Authors' code: xomicsdatascience/scTransient_notebooks (no license)

Status: code verified, 8 files readable, 10 matches

[5526] doi:10.1093/nar/gkag374 [paper, data]

Dual role of ZIC2 during neural induction: from priming transcription factor to enhancer activator.

Journal: Nucleic acids research

Status: data only, 1 dataset cited

[5527] Code ↔ Paper doi:10.1093/narmme/ugag028 [paper, repository]

MCVAE-based multi-omic anomaly detection in Fragile X Syndrome.

Journal: NAR molecular medicine

Authors' code: gitlab.inria.fr/wkhatir/mcvae_anomaly_detection (no license)

Status: code verified, 42 files readable, 14 matches

[5528] Code ↔ Paper doi:10.1093/neuonc/noaf296 [paper, repository]

Distinct molecular profiles characterize the spontaneous growth rate of IDHmt low-grade astrocytomas and oligodendrogliomas.

Journal: Neuro-oncology

Authors' code: badozor/methyltools (GPL)

Status: code verified, 1 file readable

[5529] Code ↔ Paper doi:10.1093/sleep/zsaf410 [paper, repository]

Does twitch-spindle coupling differ between N2 and N3 sleep in 6-month-olds?

Journal: Sleep

Authors' code: Blumberg-Lab/Chirstiansen-et-al-2026 (no license)

Status: code verified, 9 files readable, 2 matches

[5530] doi:10.1093/sleep/zsag022 [paper]

Mamba-based deep learning approach for sleep staging on a wireless multimodal wearable system without electroencephalography.

Journal: Sleep

Status: code on request

[5531] doi:10.1093/toxsci/kfag022 [paper, data]

Integration of human microbiota (SIHUMIx) and zebrafish models reveals microbiome-mediated host responses to azoxystrobin.

Journal: Toxicological sciences : an official journal of the Society of Toxicology

Status: data only, 2 datasets cited

[5532] Code ↔ Paper doi:10.1096/fj.202504113r [paper, repository]

Brain Proteomic Responses to Glucocorticoids and Their Relationship With Transcriptome: A Systematic Meta-Analysis.

Journal: FASEB journal : official publication of the Federation of American Societies for Experimental Biology

Authors' code: Grzegorz-R-Juszczak/Scripts-for-Brain-proteomic-responses-to-GCs (MIT), Grzegorz-R-Juszczak/Protein-coding-gene-IDs-human-mouse-rat-pig (MIT)

Status: code verified, 35 files readable, 7 matches

[5533] doi:10.1096/fj.202504243r [paper, data]

Maternal Choline Supplementation in a Mouse Model of Down Syndrome and Alzheimer's Disease Generates Unique Expression Profile Mosaics Within Three Hippocampal Excitatory Neuronal Populations.

Journal: FASEB journal : official publication of the Federation of American Societies for Experimental Biology

Status: data only, 1 dataset cited

[5534] doi:10.1111/acel.70459 [paper, data]

Differential Gene Expression in Human Hippocampus With Aging.

Journal: Aging cell

Status: data only, 1 dataset cited

[5535] doi:10.1111/acel.70470 [paper]

Serum-Derived Extracellular Vesicles as Biological Indicator of Mobility Resilience in Older Adults.

Journal: Aging cell

Status: data only

[5536] Code ↔ Paper doi:10.1111/apha.70202 [paper, repository]

Signal Amplification in the HPT Axis-Evidence for Its Existence, Location, Significance, and Molecular Mechanisms.

Journal: Acta physiologica (Oxford, England)

Authors' code: pulsatility/2025-signal-amplification-in-HPT-axis (no license)

Status: code verified, 3 files readable

[5537] doi:10.1111/ejn.70471 [paper]

Sub-Anesthetic Ketamine Administration Decreases Deviance Detection Responses at the Cellular, Population- and Mesoscale Levels.

Journal: The European journal of neuroscience

Status: code on request

[5538] Code ↔ Paper doi:10.1111/ejn.70475 [paper, repository]

Neural and Mechanical Adaptations During Static Stretching With Different Amplitudes.

Journal: The European journal of neuroscience

Authors' code: denisclvieira/STRETCHAMPLITUDE (no license)

Status: empty repository

[5539] Code ↔ Paper doi:10.1111/ejn.70480 [paper, repository]

Astrocyte Proximity Protects Synapses From Human Amyloid-Beta Induced Degeneration in a Mouse Ex Vivo Model of Early Alzheimer's Disease.

Journal: The European journal of neuroscience

Authors' code: francesco-gobbo/astrocyte-proximity-protects-synapses-in-ad (Apache-2.0)

Status: code verified, 6 files readable, 4 matches

[5540] Code ↔ Paper doi:10.1111/ejn.70481 [paper, repository]

Neural and Behavioral Tracking of Musical Phrases Occurs Without Temporal Regularity.

Journal: The European journal of neuroscience

Authors' code: OSF btmxa (no license)

Status: code verified, 22 files readable, 11 matches

[5541] doi:10.1111/ejn.70486 [paper, data]

Dopamine in the Nucleus Accumbens Signals Salience of Auditory Deviance.

Journal: The European journal of neuroscience

Status: data only, 1 dataset cited

[5542] doi:10.1111/ejn.70489 [paper, data]

Noninvasive Stimulation of Contralateral Primary Motor Cortex Reduces the Amount of Skill Generalization to the Untrained Arm: Primary Motor Cortex and Intermanual Skill Generalization.

Journal: The European journal of neuroscience

Status: data only, 1 dataset cited

[5543] doi:10.1111/ejn.70490 [paper, data]

Analysis of Task Demand Effects on Visual and Auditory Mismatch Negativity (MMN) Across Autistic and Schizotypal Traits.

Journal: The European journal of neuroscience

Status: data only, 2 datasets cited

[5544] doi:10.1111/ejn.70503 [paper, data]

Modulation of Predictive Coding in Auditory Paradigms of Varying Complexity in Children With Developmental Language Disorder.

Journal: The European journal of neuroscience

Status: data only, 1 dataset cited

[5545] Code ↔ Paper doi:10.1111/ejn.70511 [paper, repository]

The Effect of Caffeine Consumption and Acute Withdrawal on Resting-State fMRI Brain Connectivity, Mood and Cognition.

Journal: The European journal of neuroscience

Authors' code: OSF 8ju76 (no license)

Status: empty repository

[5546] doi:10.1111/gbb.70049 [paper, data]

Whisking Behaviour Reveals Stronger Evidence of Habituation in Homozygous Reeler Mice Compared to Controls.

Journal: Genes, brain, and behavior

Status: data only, 1 dataset cited

[5547] doi:10.1111/jnc.70420 [paper]

Loss of Kv8.2 in the Mouse Retina Is Associated With Altered One-Carbon Metabolism.

Journal: Journal of neurochemistry

Status: code on request

[5548] doi:10.1111/jnc.70430 [paper]

Peri-Microvascular Glycogen and Lactate Regulate Capillary Constrictions and Ischemia Outcome in Mice.

Journal: Journal of neurochemistry

Status: code on request

[5549] Code ↔ Paper doi:10.1111/jne.70185 [paper, repository]

Testosterone, cortisol, and fNIRS-based cortical activation associated with competitive task persistence and difficulty.

Journal: Journal of neuroendocrinology

Authors' code: OSF djwkv (no license)

Status: code verified, 12 files readable, 4 matches

[5550] Code ↔ Paper doi:10.1111/mec.70350 [paper, repository]

Divergent Selection on Dispersal Targets Chemosensory and Neuronal Genes in Tribolium castaneum.

Journal: Molecular ecology

Authors' code: mdpointer/Tribolium_dispersal_genomics (no license), doi:10.5061/dryad.v6wwpzh8b (no license)

Status: dead link

[5551] Code ↔ Paper doi:10.1111/nyas.70250 [paper, repository]

Structure, Dynamics, and Neural Codes in a Bat Social Network.

Journal: Annals of the New York Academy of Sciences

Authors' code: Zenodo 13938638 (CC-BY-4.0)

Status: code verified

[5552] Code ↔ Paper doi:10.1111/psyp.70286 [paper, repository]

Partially Different Mechanisms of Social and Nonsocial Attention: Evidence From Changes in Cueing Effects and Underlying Frontal Cortex Processing Over Time.

Journal: Psychophysiology

Authors' code: OSF p7cx4 (no license)

Status: code verified, 2 files readable, 2 matches

[5553] Code ↔ Paper doi:10.1111/psyp.70297 [paper, repository]

Heartbeat-Evoked Responses in M/EEG: A Systematic Review of Methods With Suggestions for Analysis and Reporting.

Journal: Psychophysiology

Authors' code: PaulSteinfath/systematic-hep-review (no license), liobaenk/citation-diversity-tracking (CC0-1.0), paulsteinfath.shinyapps.io/her-systematic-review (no license), PaulSteinfath/systematic-hep (no license)

Status: code verified, 73 files readable, 17 matches

[5554] Code ↔ Paper doi:10.1111/psyp.70303 [paper, repository]

Misinterpreting Electrophysiology in Human Cognitive Neuroscience.

Journal: Psychophysiology

Authors' code: OSF q4mez (no license)

Status: code verified

[5555] doi:10.1117/1.nph.13.2.025004 [paper]

Data-driven optimization of preschoolers' hemodynamic response in a VR setup: advancing analytic methods for children's fNIRS naturalistic data with the AICopt method.

Journal: Neurophotonics

Status: code on request

[5556] doi:10.1117/1.nph.13.2.025009 [paper]

Distinct neural signatures of phonemic and semantic verbal fluency: a double dissociation in cortical activation and functional connectivity revealed by fNIRS.

Journal: Neurophotonics

Status: code on request

[5557] Code ↔ Paper doi:10.1117/1.nph.13.2.025011 [paper, repository]

Measurement of the absolute value of the optical birefringence of myelin in primate brain tissue.

Journal: Neurophotonics

Authors' code: Ting24k/Myelin-Birefringence-measurement (MIT)

Status: code verified, 7 files readable

[5558] Code ↔ Paper doi:10.1126/sciadv.adz3398 [paper, repository]

Copper deficiency impairs oligodendrocyte maturation and social behavior via mitophagy and mTOR suppression in ASD.

Journal: Science advances

Authors' code: Zenodo 17730406 (CC-BY-4.0), BertoLabMUSC/Usui_Metallome_2023 (no license)

Status: code verified, 32 files readable, 2 matches

[5559] doi:10.1158/0008-5472.can-25-3092 [paper, data]

Nerves Stimulate Cross-talk Between Gastric Cancer and Group 3 Innate Lymphoid Cells to Enhance Immunosuppression.

Journal: Cancer research

Status: data only, 1 dataset cited

[5560] Code ↔ Paper doi:10.1162/imag.a.1190 [paper, repository]

Canonical Hidden Markov Model Networks for studying M/EEG.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: Zenodo 10401793 (CC-BY-4.0), Zenodo 6875060 (BSD-3-Clause)

Status: code verified, 72 files readable, 6 matches

[5561] Code ↔ Paper doi:10.1167/iovs.67.4.45 [paper, repository]

Mean Apparent Propagator MRI: A Potential Imaging Biomarker of Brain Microstructural Alterations in Basic-Type Intermittent Exotropia.

Journal: Investigative ophthalmology & visual science

Authors' code: anonymous.4open.science/r/mapmri-et-c520 (no license)

Status: code found, still to be checked

[5562] doi:10.1172/jci193475 [paper, data]

Conserved sleep disturbances in FOXP1 syndrome originate from developmental dysregulation of peptidergic signaling.

Journal: The Journal of clinical investigation

Status: data only, 1 dataset cited

[5563] Code ↔ Paper doi:10.1177/20552173261448282 [paper, repository]

The constrained brain in multiple sclerosis: Cognitive impairment is related to network-specific coupling of structural and functional connectivity.

Journal: Multiple sclerosis journal - experimental, translational and clinical

Authors' code: marloesbet/SC-FC (no license)

Status: dead link

[5564] doi:10.1186/s12860-026-00584-w [paper, data]

A role for PaxB in regulating blebbing: experimental insights and theoretical perspectives from Dictyostelium discoideum.

Journal: BMC molecular and cell biology

Status: data only, 1 dataset cited

[5565] doi:10.1186/s12866-026-05013-8 [paper, data]

Cold environment is associated with worse outcomes in ischemic stroke patients and the underlying gut microbial mechanism.

Journal: BMC microbiology

Status: data only, 1 dataset cited

[5566] Code ↔ Paper doi:10.1186/s12943-026-02612-x [paper, repository]

Modeling pediatric low-grade glioma heterogeneity using human forebrain organoids.

Journal: Molecular cancer

Authors' code: LTiberiLab/pLGG_Leva_Santomaso_2026 (no license)

Status: dead link

[5567] doi:10.1186/s13041-026-01298-y [paper, data]

Repeated sleep deprivation selectively reactivates hippocampal CA1 pyramidal neurons.

Journal: Molecular brain

Status: data only, 2 datasets cited

[5568] doi:10.1242/dmm.052681 [paper, data]

Transcriptomic and proteomic insights into progressive myoclonus epilepsy type 1.

Journal: Disease models & mechanisms

Status: data only, 1 dataset cited

[5569] Code ↔ Paper doi:10.1371/journal.pcbi.1014112 [paper, repository]

Opposing cortical forces: Alpha slowing and sensorimotor mu acceleration during motor-related BCI training.

Journal: PLoS computational biology

Authors' code: kyriakikostoglou/EKF-Oscillator-Tracking (MIT), graz-bci/EKF-Oscillator-Tracking (MIT)

Status: code verified, 16 files readable, 3 matches

[5570] Code ↔ Paper doi:10.1371/journal.pdig.0001316 [paper, repository]

Reliability of a convolutional neural network in segmenting multiple sclerosis lesions from MRI: Impact of data augmentation, image modality and tolerance with U-Net architecture.

Journal: PLOS digital health

Authors' code: Zenodo 16211828 (CC-BY-4.0), adamhillingerszekely/unetbrainms (no license)

Status: code verified, 18 files readable

[5571] doi:10.1371/journal.pgen.1012081 [paper, data]

ADNP regulates chromatin architecture and lineage fidelity during neural differentiation.

Journal: PLoS genetics

Status: data only, 1 dataset cited

[5572] Code ↔ Paper doi:10.1371/journal.pgen.1012090 [paper, repository]

Delta family protocadherins contribute to protoglomerular targeting of olfactory sensory neuron axons in the olfactory bulb.

Journal: PLoS genetics

Authors' code: DanielTBarnes/sc-RNAseq-of-Zebrafish-Olfactory-Sensory-Neurons (no license)

Status: code verified, 2 files readable, 4 matches

[5573] doi:10.14814/phy2.70856 [paper, data]

STAT4-dependent regulation of neuroinflammation in atherosclerosis.

Journal: Physiological reports

Status: data only, 1 dataset cited

[5574] Code ↔ Paper doi:10.1523/eneuro.0423-25.2026 [paper, repository]

Cortically Mediated Muscle Responses to Balance Perturbations Increase with Perturbation Magnitude in Older Adults with and without Parkinson's Disease.

Journal: eNeuro

Authors' code: Neuromechanics-Lab/HOA_PD_SRM (no license)

Status: code verified, 46 files readable, 5 matches

[5575] doi:10.1523/jneurosci.0409-25.2026 [paper, data]

The Role of Disulfide Bonds in the GluN1 Subunit in the Early Trafficking and Functional Properties of GluN1/GluN2 and GluN1/GluN3 NMDA Receptors.

Journal: The Journal of neuroscience : the official journal of the Society for Neuroscience

Status: data only, 2 datasets cited

[5576] doi:10.2147/jpr.s566042 [paper]

Quantum Mechanical Mechanisms in the Therapeutic Effects of Spinal Cord Stimulation to Treat Chronic Neuropathic Pain: A Quantum Computational Model.

Journal: Journal of pain research

Status: code on request

[5577] Code ↔ Paper doi:10.3389/fnins.2026.1605209 [paper, repository]

Spiking neural networks provide accurate and time-efficient models for whisker stimulus classification of the awake mouse.

Journal: Frontiers in neuroscience

Authors' code: IGITUGraz/LSM (GPL-3.0), gitlab.rlp.net/salbrec/sdrpml (no license)

Status: code verified, 21 files readable, 3 matches

[5578] doi:10.3389/fonc.2026.1771697 [paper, data]

EMILIN-1 in the tumor microenvironment: insights from CNS tumors and beyond.

Journal: Frontiers in oncology

Status: data only, 1 dataset cited

[5579] doi:10.3389/fphar.2026.1790866 [paper]

Akkermansia muciniphila improving depression-like behaviors by regulating glycerophospholipid metabolism in gut-brain axis.

Journal: Frontiers in pharmacology

Status: data only

[5580] Code ↔ Paper doi:10.3389/frai.2026.1771088 [paper, repository]

Few-shot deployment of pretrained MRI transformers in brain imaging tasks.

Journal: Frontiers in artificial intelligence

Authors' code: MengyuLiGit/MAE-FUnet-MRI-finetune (MIT)

Status: code verified, 543 files readable, 10 matches

[5581] Code ↔ Paper doi:10.3390/bioengineering13040413 [paper, repository]

HIV-Associated Microstructural Abnormalities in Default Mode, Executive Control, and Salience Networks: Insights from Tensor-Valued Diffusion Encoding.

Journal: Bioengineering (Basel, Switzerland)

Authors' code: filip-szczepankiewicz/fwf_seq_resources (BSD-3-Clause)

Status: code verified, 12 files readable

[5582] doi:10.3390/cimb48040369 [paper]

Elucidating the Multi-Target Anti-Pruritic Mechanism of <i>Polygonatum odoratum</i> via Integrated Network Pharmacology, Molecular Simulations, and GEO Dataset Validation.

Journal: Current issues in molecular biology

Status: data only

[5583] doi:10.3390/e28040390 [paper]

Age-Related Changes in EEG Signal Complexity and Behavioral Variability from Childhood to Adulthood: A Multiscale Entropy Approach.

Journal: Entropy (Basel, Switzerland)

Status: code on request

[5584] Code ↔ Paper doi:10.64898/2026.03.30.714220 [paper, repository]

An integrated single cell and spatial omics atlas of human prenatal development

Journal: bioRxiv (preprint)

Authors' code: haniffalab/hdca-paper (no license), theislab/idtrack (BSD-3-Clause), cellgeni/OMERO_tools (no license), haniffalab/cherita-react (MIT), theislab/sctram (BSD-3-Clause)

Status: code verified, 136 files readable, 19 matches

[5585] Code ↔ Paper doi:10.64898/2026.03.30.715222 [paper, repository]

Synthetic lumen rounding directs neural progenitor division mode

Journal: bioRxiv (preprint)

Authors' code: mebisuya/BrainOrganoidShape (no license)

Status: code verified, 7 files readable, 1 match

[5586] Code ↔ Paper doi:10.64898/2026.03.31.26349848 [paper, repository]

Mapping Individual Neuroanatomical Alterations to Schizophrenia Psychopathology with Normative Modeling

Journal: medRxiv (preprint)

Authors' code: OSF etdvu (no license), predictive-clinical-neuroscience/braincharts (GPL-3.0)

Status: code verified, 11 files readable, 6 matches

Tuesday, 31 March 2026 (40 papers, 14 on this page)

[5587] Code ↔ Paper doi:10.1002/advs.202517738 [paper, repository]

SKOOTS: Skeleton-Oriented Object Segmentation for Mitochondria in High-Resolution Cochlear EM Datasets.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Authors' code: indzhykulianlab/bism (MIT), indhzkyulianlab/bism (no license), indzhykulianlab/skoots (MIT)

Status: code verified, 105 files readable, 15 matches

[5588] Code ↔ Paper doi:10.1002/advs.202521101 [paper, repository]

Endoplasmic Reticulum Geometry Dictates Neuronal Bursting via Calcium Store Refill Rates and Exposes Selective Neuronal Vulnerability.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Authors' code: lenafabr/networkSpreadFVM (GPL-3.0), lenafabr/aspatialCaERrefill (no license)

Status: code verified, 52 files readable, 3 matches

[5589] Code ↔ Paper doi:10.1007/s00259-026-07868-5 [paper, repository]

Bayesian modelling demonstrates clinically relevant heterogeneity in Tau PET patterns in Alzheimer's disease.

Journal: European journal of nuclear medicine and molecular imaging

Authors' code: thomasyeolab/cbig (MIT)

Status: code verified, 2,000 files readable

[5590] Code ↔ Paper doi:10.1007/s00415-026-13777-2 [paper, repository]

Genotype-phenotype correlations and protein domain-level predictors of cerebrovascular malformations in hereditary hemorrhagic telangiectasia.

Journal: Journal of neurology

Authors' code: Zenodo 22100478 (CC-BY-4.0), Zenodo 22100477 (CC-BY-4.0)

Status: code verified

[5591] Code ↔ Paper doi:10.1016/j.bpj.2026.03.028 [paper, repository]

Astral architecture can enhance mechanical strength of cytoskeletal networks by modulating percolation thresholds.

Journal: Biophysical journal

Authors' code: Zenodo 18970832 (GPL-3.0), Zenodo 18970060 (CC-BY-4.0), bcberg/berg_astralmikado (no license), bcberg/cytosim-bcb (GPL-3.0)

Status: code verified, 1,143 files readable, 9 matches

[5592] doi:10.1016/j.celrep.2026.117093 [paper]

Pharmacological administration of FGF21 reverses obesity through a parabrachial-projecting neuron population in the hindbrain.

Journal: Cell reports

Status: code on request

[5593] Code ↔ Paper doi:10.1016/j.dcn.2026.101717 [paper, repository]

Number words recruit numerosity-related cortex in 3- to 5-year-old children.

Journal: Developmental cognitive neuroscience

Authors' code: support.brainvoyager.com/available-tools/52 (no license)

Status: code verified

[5594] doi:10.1016/j.jbc.2026.111420 [paper, data]

CTRP10 is required for optimal motor function.

Journal: The Journal of biological chemistry

Status: data only, 1 dataset cited

[5595] Code ↔ Paper doi:10.1016/j.neuroimage.2026.121899 [paper, repository]

Alcohol impacts an fMRI marker of neural inhibition in humans and rodents.

Journal: NeuroImage

Authors' code: monami-nishio/alcohol_effect_hurst (no license), Zenodo 19020258 (CC-BY-4.0)

Status: code verified, 28 files readable, 4 matches

[5596] doi:10.1016/j.xcrm.2026.102705 [paper]

Multisensory integration in peripersonal space indexes consciousness states in sleep and disorders of consciousness.

Journal: Cell reports. Medicine

Status: code on request

[5597] doi:10.1016/j.xcrm.2026.102711 [paper, data]

Bed nucleus of the stria terminalis-nucleus accumbens stimulation for depression: A randomized, double-blind, crossover trial.

Journal: Cell reports. Medicine

Status: code on request, 1 dataset cited

[5598] doi:10.1016/j.xcrm.2026.102723 [paper]

Identifying the role of NLRP3 inflammasome in stroke progression and outcome before recanalization.

Journal: Cell reports. Medicine

Status: code on request

[5599] Code ↔ Paper doi:10.1038/s41380-026-03554-y [paper, repository]

A longitudinal DNA methylation atlas and its link to brain structure and mental health.

Journal: Molecular psychiatry

Authors' code: dichen27/dnam_pattern (no license)

Status: code verified, 141 files readable, 7 matches

[5600] doi:10.1038/s41380-026-03568-6 [paper]

Anti-NMDAR encephalitis impairs intrinsic hippocampal dynamics through neuronal hypercoupling, hub dominance, and aberrant ensembles.

Journal: Molecular psychiatry

Status: code on request

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