Every paper, by date: page 13

4,974 papers with a page: 2,882 with their authors' code, 597 with code on request, 1,495 with data only. The most recent first, 100 a page. Page 13 of 50: 27 July 2026 to 23 July 2026.

Monday, 27 July 2026 (35 papers, 26 on this page)

[1201] doi:10.1038/s41378-026-01391-1 [paper, data]

High pressure transcranial focused ultrasound stimulation induces parameter-dependent cell-type specific effects.

Journal: Microsystems & nanoengineering

Status: data only, 1 dataset cited

[1202] doi:10.1038/s41398-026-04302-0 [paper]

Early life adversity shapes neural and behavioural responses to oxytocin during altruistic decision-making.

Journal: Translational psychiatry

Status: code on request

[1203] Code ↔ Paper doi:10.1038/s41467-026-75706-1 [paper, repository]

Dissociable roles of prefrontal plasticity in decision-making strategy and execution of habitual behavior.

Journal: Nature communications

Authors' code: Nozomi-Asaoka/Custom-code-for-Asaoka-et-al-2026 (MIT)

Status: code verified, 5 files readable

[1204] Code ↔ Paper doi:10.1038/s41467-026-75749-4 [paper, repository]

SLC26A11 is an atypical solute carrier with dual transport-channel function mediating lysosomal sulfate transport.

Journal: Nature communications

Authors' code: jugit.fz-juelich.de/computational-neurophysiology/slc26a11-ion-binding (no license)

Status: code verified

[1205] doi:10.1038/s41467-026-75941-6 [paper, data]

Structural and functional studies of inward rectifier Kir7.1 and its regulation by the Melanocortin-4 receptor.

Journal: Nature communications

Status: data only, 2 datasets cited

[1206] Code ↔ Paper doi:10.1038/s42003-026-10646-6 [paper, repository]

Energy paradox in REM sleep: balancing supply and consumption in brain metabolism.

Journal: Communications biology

Authors' code: ContextLab/seqnmf (MIT)

Status: code verified, 7 files readable

[1207] Code ↔ Paper doi:10.1038/s43856-026-01510-z [paper, repository]

Mapping genetic convergence across brain structure, mental health, and cardiometabolic disease.

Journal: Communications medicine

Authors' code: BioPsyk/cleansumstats (no license), bulik/ldsc (GPL-3.0), comorment/ldsc (GPL-3.0), precimed/mix3r (no license), GenomicSEM/GenomicSEM (GPL-3.0), precimed/pleiofdr (GPL-3.0)

Status: code verified, 313 files readable, 4 matches

[1208] Code ↔ Paper doi:10.1093/braincomms/fcag293 [paper, repository]

Visual processing of manipulable objects in the ventral stream is modulated by parietal action systems.

Journal: Brain communications

Authors' code: frankgarcea/GarceaColleagues_BrainComms (no license)

Status: code verified, 47 files readable, 4 matches

[1209] doi:10.1093/pnasnexus/pgag254 [paper, data]

Intermittent fasting rewires tissue-specific gene-transposable element regulatory networks.

Journal: PNAS nexus

Status: data only, 1 dataset cited

[1210] Code ↔ Paper doi:10.1162/imag.a.1309 [paper, repository]

Probing the content of semantic representations in body-selective regions.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: figshare 32348043 (CC-BY-4.0), amano-k-lab/interpret_semrep (MIT)

Status: code verified, 28 files readable, 25 matches

[1211] Code ↔ Paper doi:10.1162/imag.a.1313 [paper, repository]

Functional specialization of angular gyrus and precuneus subregions for perspective-guided autobiographical memory retrieval.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: OSF 4785r (no license)

Status: code verified, 3 files readable, 1 match

[1212] Code ↔ Paper doi:10.1162/imag.a.1317 [paper, repository]

Bayesian insights into exchange and restriction in gray matter diffusion MRI.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: mjallais/NEXI_SANDIX_uGUIDE (no license)

Status: code verified, 9 files readable, 1 match

[1213] Code ↔ Paper doi:10.1162/netn.a.555 [paper, repository]

Neural dynamics of mindfulness training: A longitudinal EEG network analysis of focused attention and open monitoring meditation.

Journal: Network neuroscience (Cambridge, Mass.)

Authors' code: OSF buxah (no license)

Status: code verified, 2 files readable, 1 match

[1214] Code ↔ Paper doi:10.1162/netn.a.570 [paper, repository]

Higher-order statistics for constructing centered edge functional connectivity.

Journal: Network neuroscience (Cambridge, Mass.)

Authors' code: Junting-Wang/centered-eFC (no license)

Status: code verified, 7 files readable, 2 matches

[1215] Code ↔ Paper doi:10.1162/netn.a.571 [paper, repository]

Regional activity and interregional functional connectivity uniquely contribute to social cognitive judgments during movie-watching.

Journal: Network neuroscience (Cambridge, Mass.)

Authors' code: OSF 8bvu9 (no license), rcf004/edge-timeseries-linear-interaction (no license)

Status: code verified, 23 files readable, 1 match

[1216] doi:10.1186/s40478-026-02391-y [paper, data]

Neuro-glial lipid imbalance in a Drosophila model of amyotrophic lateral sclerosis 8.

Journal: Acta neuropathologica communications

Status: data only, 1 dataset cited

[1217] Code ↔ Paper doi:10.1364/boe.605821 [paper, repository]

Deep unfolding blind source unmixing for multicolor fluorescence imaging.

Journal: Biomedical optics express

Authors' code: ydeng805/DuBsUnmix (MIT)

Status: code verified, 19 files readable, 1 match

[1218] Code ↔ Paper doi:10.1371/journal.pcbi.1014555 [paper, repository]

Body surface potential driven personalisation of electrophysiological digital twins in hypertrophic cardiomyopathy.

Journal: PLoS computational biology

Authors' code: stelong/GPErks (MIT), CEMRG-publications (no license), Slicer/Slicer (other), wasserth/TotalSegmentator (Apache-2.0), aneic/meshtool (GPL-3.0)

Status: code verified, 1,620 files readable

[1219] doi:10.1371/journal.pone.0316959 [paper, data]

In vivo changes in zebrafish anesthetic sensitivity in response to the loss of kif5Aa are associated with the alteration of mitochondrial motility.

Journal: PloS one

Status: data only, 1 dataset cited

[1220] doi:10.3389/fpsyt.2026.1843959 [paper]

Resting-state functional connectivity of the sensorimotor network in medication-naïve Chinese children with ADHD: cross-sectional associations with hyperactivity/impulsivity and executive function.

Journal: Frontiers in psychiatry

Status: code on request

[1221] Code ↔ Paper doi:10.3390/genes17080874 [paper, repository]

Multi-Omic Analysis of Cerebrospinal Fluid Metabolites in Autism Spectrum Disorder: Biomarker Identification, Metabolic Genetics Insights, and Network Toxicology.

Journal: Genes

Authors' code: yanglab.westlake.edu.cn/software/smr (no license)

Status: code verified

[1222] doi:10.3390/life16081245 [paper, data]

Growth Hormone-Insulin-like Growth Factor Axis and GDF-15 in Critical Illness: Implications for Survival Stratification.

Journal: Life (Basel, Switzerland)

Status: data only, 1 dataset cited

[1223] Code ↔ Paper doi:10.3390/s26154773 [paper, repository]

EEG-Based Supported Diagnosis of ADHD Using Subject-Specific HMMs and Stationary RKHS Embeddings.

Journal: Sensors (Basel, Switzerland)

Authors' code: leonlpz/HMM_RKHS_Classification_Project (MIT)

Status: code verified, 9 files readable, 12 matches

[1224] Code ↔ Paper doi:10.7554/elife.107635 [paper, repository]

Stable excitatory-inhibitory synapse balance despite dynamic turnover.

Journal: eLife

Authors' code: datajamesallen/Garbett_2026_eLife (MIT)

Status: code verified, 69 files readable, 11 matches

[1225] Code ↔ Paper doi:10.7554/elife.110685 [paper, repository]

Sensory adaptation and pupil-linked arousal support flexible evidence accumulation during perceptual decision making.

Journal: eLife

Authors' code: TheGoldLab/ms_2026_mcgaughey_gold_elife (MIT)

Status: code verified, 40 files readable, 9 matches

[1226] Code ↔ Paper doi:10.7554/elife.89629 [paper, repository]

Active dendrites enable robust spiking computations despite timing jitter.

Journal: eLife

Authors' code: olearylab/active_dendrites_robust_spiking (GPL-3.0)

Status: code verified, 160 files readable, 1 match

Sunday, 26 July 2026 (5 papers)

[1227] doi:10.1111/bpa.70125 [paper, data]

From patient to tumor organoid: Culture protocol choice controls glioblastoma tumor architecture and identity.

Journal: Brain pathology (Zurich, Switzerland)

Status: data only, 1 dataset cited

[1228] doi:10.1186/s40708-026-00325-x [paper, data]

CAE-BrainNet: a statistically validated class-adaptive attention ensemble model for explainable brain tumor classification from MRI.

Journal: Brain informatics

Status: data only, 4 datasets cited

[1229] Code ↔ Paper doi:10.3390/biomedicines14081677 [paper, repository]

Exploratory Genome and Transcriptome-Wide Association Analyses of Addiction-Related Phenotypes in a Twin Cohort.

Journal: Biomedicines

Authors' code: jared8844/code-for-addiction-paper (no license)

Status: code verified, 3 files readable, 5 matches

[1230] doi:10.3390/ijms27156671 [paper, data]

Inflamed Yet Immune-Evasive? A Transcriptomic Meta-Analysis Identifies Conserved Inflammatory, Developmental, and Neuronal Signatures Associated with Polyploid Giant Cancer Cells.

Journal: International journal of molecular sciences

Status: data only, 1 dataset cited

[1231] Code ↔ Paper doi:10.3390/nu18152441 [paper, repository]

Clinical Improvement and Taxonomic-Functional Gut Microbiome Remodeling After Six Months of Multi-Strain Synbiotic Supplementation in Mexican Children with Autism Spectrum Disorder.

Journal: Nutrients

Authors' code: biobakery/humann (MIT)

Status: code verified, 73 files readable, 2 matches

Saturday, 25 July 2026 (11 papers)

[1232] Code ↔ Paper doi:10.1007/s12021-026-09789-y [paper, repository]

Optimizing Photogrammetry Parameters for 3D Reconstruction of Fresh Brain Specimens.

Journal: Neuroinformatics

Authors' code: drive.google.com/drive/folders (no license)

Status: code verified

[1233] doi:10.1016/j.ibneur.2026.07.011 [paper, data]

Brain criticality and advanced meditation "cessation" events: An intensively sampled electroencephalography case study.

Journal: IBRO neuroscience reports

Status: data only, 1 dataset cited

[1234] Code ↔ Paper doi:10.1016/j.namjnl.2026.100121 [paper, repository]

Predicting blood-brain barrier permeability of chemicals by machine learning modeling.

Journal: NAM journal

Authors' code: sourceforge.net/openbabel (no license)

Status: code verified

[1235] Code ↔ Paper doi:10.1016/j.premed.2026.100050 [paper, repository]

From lipid dynamics to precision predictions: A new approach methodology for precision modeling of phosphoinositide signaling.

Journal: Journal of precision medicine (Amsterdam, Netherlands)

Authors' code: ClancyLabUCD/from-lipid-dynamics-to-precision-predictions (GPL-3.0)

Status: code verified, 23 files readable, 11 matches

[1236] doi:10.1038/s41420-026-03250-4 [paper, data]

Transcriptomic analysis reveals that neural stem cell-derived exosomes regulate the HMGB1/TLR2 signaling axis to promote astrocytic differentiation and mitochondrial biogenesis in the repair of radiation-induced blood-brain barrier damage.

Journal: Cell death discovery

Status: data only, 1 dataset cited

[1237] Code ↔ Paper doi:10.1038/s41467-026-75352-7 [paper, repository]

Mechanosensory encoding of surface mechanics optimizes locomotion.

Journal: Nature communications

Authors' code: gitlab.icfo.net/nmsb/track-live-close-loop (no license), gitlab.icfo.net/nmsb/cal-free-m-worm (no license), gitlab.icfo.net/nmsb/traction-force-worm (no license), gitlab.icfo.net/nmsb/net-sim-worm (no license)

Status: code verified, 43 files readable, 9 matches

[1238] Code ↔ Paper doi:10.1038/s41467-026-75945-2 [paper, repository]

Neural dynamics for working memory and evidence integration during olfactory navigation in Drosophila.

Journal: Nature communications

Authors' code: nagellab/AlvarezSalvado_ElementaryTransformations (MIT), nagellab/Mathesonetal2022 (BSD-2-Clause), nagellab/Kathmanetal2025 (GPL-3.0)

Status: code verified, 238 files readable, 8 matches

[1239] doi:10.1038/s41598-026-62854-z [paper, data]

House price prediction using a hybrid GRU-MLP based on binary whale optimization algorithm and ant colony optimization for hyperparameter tuning.

Journal: Scientific reports

Status: data only, 1 dataset cited

[1240] Code ↔ Paper doi:10.1113/jp291217 [paper, repository]

Transcranial direct current stimulation enhances delayed retention after 5 days of lower-limb motor skill learning.

Journal: The Journal of physiology

Authors' code: MovementAndNeuroscience/TrackIt-LiteV2 (MIT)

Status: code verified, 91 files readable

[1241] doi:10.3390/antiox15080926 [paper, data]

NRF2 Deletion Results in Mobility Impairment in A53TSyn Model of Synucleinopathy.

Journal: Antioxidants (Basel, Switzerland)

Status: data only, 1 dataset cited

[1242] doi:10.3390/bios16080405 [paper]

A Low-Power PLL-Less Wideband OOK Wireless Neural-Signal Transmitter for Miniaturized Neural Interfaces with In Vivo Validation in Freely Moving Mice.

Journal: Biosensors

Status: code on request

Friday, 24 July 2026 (34 papers)

[1243] Code ↔ Paper doi:10.1002/epi4.70311 [paper, repository]

Bridging computational and clinical strategies for presurgical identification of epileptogenic networks.

Journal: Epilepsia open

Authors' code: Swiss-Epilepsy-Center/epinetmap (MIT)

Status: code verified, 9 files readable, 2 matches

[1244] doi:10.1007/s00415-026-13999-4 [paper, data]

Right hemisphere involvement in intensive aphasia therapy outcomes: a multimodal neuroimaging concept study.

Journal: Journal of neurology

Status: data only, 1 dataset cited

[1245] Code ↔ Paper doi:10.1007/s10519-026-10274-0 [paper, repository]

ADHD and Student Grades in Children from the ABCD Study<sup>®</sup>: A Twin and Siblings Study.

Journal: Behavior genetics

Authors' code: lf-araujo/2023-mrdoc2-EA-ADHD (no license)

Status: empty repository

[1246] Code ↔ Paper doi:10.1007/s12021-026-09795-0 [paper, repository]

Temporal Topology Provides an Interpretable Framework for Neuronal Morphogenesis.

Journal: Neuroinformatics

Authors' code: Zenodo 20813267 (CC-BY-4.0)

Status: code verified, 10 files readable, 2 matches

[1247] Code ↔ Paper doi:10.1007/s13755-026-00468-5 [paper, repository]

SpeechDETECT: an explainable automated speech processing pipeline for early detection of neurological and health changes.

Journal: Health information science and systems

Authors' code: SpeechCARE/SpeechDETECT-Toolkit (no license)

Status: code verified, 14 files readable, 14 matches

[1248] Code ↔ Paper doi:10.1016/j.celrep.2026.117707 [paper, repository]

Bidirectional control of vesicular GABA release, LTP, and amotivation by GluN2D-selective allosteric modulators and ketamine.

Journal: Cell reports

Authors' code: microcircuitprojects/presynaptic_glun2d (no license)

Status: code verified, 3 files readable

[1249] Code ↔ Paper doi:10.1016/j.dcn.2026.101789 [paper, repository]

Feasibility of precision functional mapping in youth multi-echo fMRI data.

Journal: Developmental cognitive neuroscience

Authors' code: OSF kgvsb (no license)

Status: code verified, 29 files readable, 6 matches

[1250] doi:10.1016/j.jbc.2026.113363 [paper, data]

The Src family kinase YES regulates DNAJB6b chaperone activity to modulate tau aggregation in Alzheimer's disease.

Journal: The Journal of biological chemistry

Status: data only, 1 dataset cited

[1251] doi:10.1016/j.omta.2026.201818 [paper]

Antisense oligonucleotide treatment following viral delivery of artificial SOD1-targeting miRNA shows improved efficacy in SOD1-G93A mice.

Journal: Molecular therapy. Advances

Status: code on request

[1252] doi:10.1016/j.omtn.2026.103037 [paper]

PIWIL2 drives stroke progression via modulation of NF-κB signaling.

Journal: Molecular therapy. Nucleic acids

Status: code on request

[1253] Code ↔ Paper doi:10.1038/s41467-026-75492-w [paper, repository]

Place and behavioral modulation of hippocampal neurons during immobility.

Journal: Nature communications

Authors' code: BurgalossiPublic/HP-BehModulation (no license)

Status: code verified, 19 files readable, 23 matches

[1254] Code ↔ Paper doi:10.1038/s41598-026-52672-8 [paper, repository]

Validation of portable, semi-dry electrode-based electroencephalography device for its application in brain-computer interface solutions.

Journal: Scientific reports

Authors' code: MelindaRacz/VSN_validation_supplementary (no license)

Status: code verified, 12 files readable, 5 matches

[1255] Code ↔ Paper doi:10.1038/s42003-026-10485-5 [paper, repository]

Dopamine dynamics as a regulatory mechanism for shifting between defensive and reward-seeking behaviors.

Journal: Communications biology

Authors' code: itk2219/TSdopamine_behavior_photometry_optogenetics (no license)

Status: code verified, 3 files readable

[1256] Code ↔ Paper doi:10.1073/pnas.2610049123 [paper, repository]

A unified machine-learning framework for ab initio multiscale modeling of liquids.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Authors' code: annatbui/mlip-neuraldft (GPL-3.0), annatbui/GCMC (GPL-3.0)

Status: code verified, 24 files readable, 4 matches

[1257] Code ↔ Paper doi:10.1162/imag.a.1301 [paper, repository]

MEG-GPT: A transformer-based foundation model for magnetoencephalography data.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: OHBA-analysis/osl-foundation (MIT), Zenodo 11099418 (CC-BY-4.0)

Status: code verified, 82 files readable, 13 matches

[1258] Code ↔ Paper doi:10.1162/imag.a.1306 [paper, repository]

Beneficial effects of foreign language learning and aerobic exercise on dentate gyrus volume and mnemonic discrimination in healthy older adults: Results from a randomized controlled trial.

Journal: Imaging neuroscience (Cambridge, Mass.)

Authors' code: OSF mz83w (no license)

Status: code verified, 4 files readable, 1 match

[1259] doi:10.1186/s12987-026-00840-3 [paper, data]

Spatiotemporal arising of molecular and functional blood-brain barrier properties in the developing Gallus gallus optic tectum.

Journal: Fluids and barriers of the CNS

Status: data only, 1 dataset cited

[1260] Code ↔ Paper doi:10.1242/dmm.052747 [paper, repository]

Cell death analysis of inducible, titratable neurodegenerative disease models in zebrafish and human stem cell-derived retinal organoids.

Journal: Disease models & mechanisms

Authors' code: mummlab/Cell-Death-in-NTR2.0-mediated-RGC-Ablation (no license)

Status: code verified, 6 files readable, 3 matches

[1261] doi:10.1242/dmm.052810 [paper, data]

Fos regulates age-dependent neuroinflammation in a VAPP58S model of amyotrophic lateral sclerosis.

Journal: Disease models & mechanisms

Status: data only, 1 dataset cited

[1262] Code ↔ Paper doi:10.1371/journal.pbio.3003922 [paper, repository]

Competing value signals impair reward-learning via dopaminergic mechanisms and increase exploration.

Journal: PLoS biology

Authors' code: Zenodo 21261694 (CC-BY-4.0), linwenwei6915/reward-punishment-interference-stan-models (MIT)

Status: code verified, 16 files readable

[1263] Code ↔ Paper doi:10.1371/journal.pcbi.1014521 [paper, repository]

Whisker stimulation reinforces a resting-state network in the barrel cortex: Nested oscillations and avalanches.

Journal: PLoS computational biology

Authors' code: benedetta-mariani (no license)

Status: code verified

[1264] Code ↔ Paper doi:10.1371/journal.pcbi.1014563 [paper, repository]

Single pulse electrical stimulation in white matter modulates iEEG visual responses in human early visual cortex.

Journal: PLoS computational biology

Authors' code: hharveygit/SPES_Visual (GPL-3.0)

Status: code verified, 242 files readable, 9 matches

[1265] Code ↔ Paper doi:10.1371/journal.pcbi.1014573 [paper, repository]

Cell-type-specific m1A dynamics are associated with microglial phenotypic transition and neuronal metabolic adaptation during spinal cord injury.

Journal: PLoS computational biology

Authors' code: Magetutor/m1A_score_manuscript (MIT)

Status: code verified, 28 files readable, 15 matches

[1266] doi:10.1371/journal.pone.0352503 [paper, data]

G-protein coupled receptor, signal and signal-transduction related transcript mapping in nigral volume and pigmented neurons reveals a potential deficit of nigral feedback signals associated with Parkinson's disease.

Journal: PloS one

Status: data only, 1 dataset cited

[1267] Code ↔ Paper doi:10.21203/rs.3.rs-10384174/v1 [paper, repository]

Maternal separation recalibrates prefrontal mitochondrial function and protects against stress-induced negative cognitive bias

Journal: Research Square (preprint)

Authors' code: Jeff-Dalley-Github (no license)

Status: code verified

[1268] doi:10.3389/fonc.2026.1823895 [paper, data]

Phosphorylation of tumour suppressor Amotl2 by IKBKE kinase promotes YAP1 signalling, enhancing glioblastoma growth.

Journal: Frontiers in oncology

Status: data only, 1 dataset cited

[1269] doi:10.3389/fpsyg.2026.1873912 [paper]

Emotional interference and right prefrontal hemodynamic responses in adult cannabis users: a pilot fNIRS study.

Journal: Frontiers in psychology

Status: code on request

[1270] Code ↔ Paper doi:10.3389/fpsyt.2026.1803720 [paper, repository]

NeuroCon-AutismNet: a privacy-preserving multimodal framework toward autism screening via diffusion-regularized EEG biomarkers and empathy-aware multilingual dialogue.

Journal: Frontiers in psychiatry

Authors' code: mkarthiga2211/NeuroCon-AutismNet (no license)

Status: code verified, 2 files readable, 12 matches

[1271] doi:10.3389/fradi.2026.1847193 [paper, data]

Image-conditioned latent rectified flow models for 3D medical anomaly localisation.

Journal: Frontiers in radiology

Status: data only, 2 datasets cited

[1272] doi:10.3390/antiox15080921 [paper, data]

Pyrroloquinoline Quinone Improves Cognitive-Related Behavioral Performance Associated with Enhanced Mitochondrial Bioenergetics in Naturally Aged Mice.

Journal: Antioxidants (Basel, Switzerland)

Status: data only, 1 dataset cited

[1273] Code ↔ Paper doi:10.3390/biomedicines14081670 [paper, repository]

Limited Detectability of Network Functional Alterations in a Tauopathy Model Using Mouse Primary Cortical Cultures.

Journal: Biomedicines

Authors' code: Zenodo 1119025 (MIT)

Status: code verified, 949 files readable, 3 matches

[1274] Code ↔ Paper doi:10.3390/brainsci16080781 [paper, repository]

A Comparison of Machine Learning Models for Classification of Parkinson's Disease During a Working Memory and Sustained Attention Task.

Journal: Brain sciences

Authors' code: mercedesterry/EEG-and-Pupillary-Feature-Extraction-Toolbox (no license)

Status: dead link

[1275] Code ↔ Paper doi:10.3390/diseases14080268 [paper, repository]

Common Inflammatory Pathways Between Periodontal Disease and Multiple Sclerosis: A Systematic Review.

Journal: Diseases (Basel, Switzerland)

Authors' code: OSF qmex2 (no license)

Status: code found, not verified yet

[1276] Code ↔ Paper doi:10.3390/ijms27156614 [paper, repository]

Candidalysin Inhibits <i>Porphyromonas gingivalis</i> Lipoprotein-Induced IL-1β Production in BV-2 Microglia via Hydrophobic Microbial Interactions.

Journal: International journal of molecular sciences

Authors' code: sokrypton/colabfold (MIT)

Status: code verified, 64 files readable, 2 matches

Thursday, 23 July 2026 (38 papers, 24 on this page)

[1277] Code ↔ Paper doi:10.1002/advs.76596 [paper, repository]

DDSurfer: A Weakly-Supervised Dual-Stream Deep Learning Framework for Cortical Surface Reconstruction From Diffusion MRI.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Authors' code: ChengjinLii/DDSurfer (no license), pnlbwh/pnlpipe (other)

Status: code verified, 96 files readable, 13 matches

[1278] doi:10.1002/advs.76778 [paper, data]

A Blood-Derived Factor Rescues ALS: Platelet Factor 4 Activates OPTN-Dependent Autophagy to Clear SOD1 Aggregates Independently of PINK1.

Journal: Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Status: data only, 2 datasets cited

[1279] Code ↔ Paper doi:10.1002/mrm.70439 [paper, repository]

Group-Patch Joint Compression: Compressing Dynamic B<sub>0</sub> and Static RF Spatial Modulations Across k-Space Subregion Groups for Highly Accelerated MRI.

Journal: Magnetic resonance in medicine

Authors' code: Zenodo 20533698 (BSD-3-Clause), ruitianwater/GroupPatchJCS_v1.0 (BSD-3-Clause), harmonizedmri.github.io/projects (no license)

Status: code verified, 216 files readable, 10 matches

[1280] Code ↔ Paper doi:10.1007/s00422-026-01047-3 [paper, repository]

Frequency-dependent coupling in response to oscillatory inputs in minimal networks of electrically coupled nodes: Gap junction networks and spatially extended neurons.

Journal: Biological cybernetics

Authors' code: BioDatanamics-Lab/Coupling_Coefficient-25_05 (no license)

Status: dead link

[1281] doi:10.1007/s10103-026-04962-w [paper]

Comparative efficacy and safety of photobiomodulation, transcranial direct current stimulation, and repetitive transcranial magnetic stimulation in Alzheimer's disease: a network meta-analysis of randomized controlled trials.

Journal: Lasers in medical science

Status: code on request

[1282] doi:10.1016/j.bbih.2026.101316 [paper]

Peripheral blood DNA methylation partially reports on immune cell type composition in the frontal brain.

Journal: Brain, behavior, & immunity - health

Status: data only

[1283] Code ↔ Paper doi:10.1016/j.isci.2026.116906 [paper, repository]

Evaluating exon skipping in the central nervous system in Duchenne muscular dystrophy using spatial transcriptomics.

Journal: iScience

Authors' code: Qirongmao97/Xenium_DMD_brain (GPL-3.0)

Status: code verified, 12 files readable, 8 matches

[1284] doi:10.1016/j.isci.2026.116926 [paper]

Organization, neuronal composition, and dynamics of neuronal ensembles in the songbird auditory forebrain.

Journal: iScience

Status: code on request

[1285] Code ↔ Paper doi:10.1016/j.molcel.2026.07.006 [paper, repository]

DeorphaNN: Virtual screening of GPCR peptide agonists using AlphaFold-predicted active-state complexes and deep learning embeddings.

Journal: Molecular cell

Authors' code: Zebreu/DeorphaNN (MIT), Zenodo 20862123 (CC-BY-4.0), Zenodo 20865768 (MIT), Maryam-Haghani/NEFFy (GPL-3.0), facebookresearch/esm (MIT), ElofssonLab/FoldDock (Apache-2.0), huhlim/alphafold-multistate (no license), google-deepmind/alphafold (Apache-2.0)

Status: code verified, 569 files readable, 15 matches

[1286] Code ↔ Paper doi:10.1016/j.patter.2026.101619 [paper, repository]

Sampling bias corrections for discrete and Gaussian partial information decompositions.

Journal: Patterns (New York, N.Y.)

Authors' code: Zenodo 20085438 (GPL-3.0), panzerilab/sampling_bias_corrections_syn_red (GPL-3.0)

Status: code verified, 99 files readable, 10 matches

[1287] doi:10.1016/j.stemcr.2026.103020 [paper, data]

Brain corticogenesis promotes SARS-CoV-2 neuro-glial tropism through lipid-dependent viral replication.

Journal: Stem cell reports

Status: data only, 1 dataset cited

[1288] doi:10.1016/j.xcrm.2026.102937 [paper]

A biomimetic hybrid membrane vesicle nanoplatform attenuates tendinopathy through neuroinflammation modulation and tendon regeneration.

Journal: Cell reports. Medicine

Status: code on request

[1289] doi:10.1016/j.xpro.2026.104716 [paper]

Protocol for studying Chemerin 15-enhanced microglial phagocytosis in cerebral ischemia-reperfusion injury via the ChemR23/p38 MAPK pathway.

Journal: STAR protocols

Status: code on request

[1290] Code ↔ Paper doi:10.1016/j.yjsbx.2026.100154 [paper, repository]

Bipixel rotation method: An algorithm for chirality analysis of biological mesh network.

Journal: Journal of structural biology: X

Authors' code: Koichimts/Bipixel_Method (MIT), Zenodo 21439490 (MIT)

Status: code verified, 8 files readable, 4 matches

[1291] doi:10.1038/s41467-026-74958-1 [paper, data]

Acute rapamycin treatment reveals distinct mechanisms of dysfunction in a maternal inflammation mouse model.

Journal: Nature communications

Status: data only, 2 datasets cited

[1292] Code ↔ Paper doi:10.1038/s41467-026-74968-z [paper, repository]

Activity-dependent ribosome profiling reveals the landscape of canonical and non-canonical translation in brain tissue.

Journal: Nature communications

Authors' code: nayanvs/Suryawanshi_et_al._2026 (no license), Zenodo 21273040 (CC-BY-4.0)

Status: code verified, 6 files readable

[1293] Code ↔ Paper doi:10.1038/s41467-026-75162-x [paper, repository]

Dyscoordination of thalamic reticular spindles is associated with social memory deficits in mice and humans with autism spectrum disorder.

Journal: Nature communications

Authors' code: Zenodo 20755328 (CC-BY-4.0)

Status: code verified, 5 files readable, 3 matches

[1294] Code ↔ Paper doi:10.1038/s41467-026-75653-x [paper, repository]

Concept2Brain: an AI model for predicting neurophysiological responses to text and pictures.

Journal: Nature communications

Authors' code: ASantosMayo/Concept2Brain (GPL-3.0)

Status: code verified, 5 files readable, 8 matches

[1295] Code ↔ Paper doi:10.1038/s41467-026-75723-0 [paper, repository]

Spatial transcriptomics reveals distinct cell type dynamics following opioid dependence in female mice with the common human μ-opioid receptor variant Oprm1 A118G.

Journal: Nature communications

Authors' code: GoogleXie/CellDynamicST (other)

Status: code verified, 36 files readable, 40 matches

[1296] Code ↔ Paper doi:10.1038/s41467-026-75837-5 [paper, repository]

A hierarchical framework for cortical and subcortical gray-matter parcellation across rodents, primates, and humans.

Journal: Nature communications

Authors' code: Zenodo 17653308 (MIT), sivaven/omniconnectmodel (MIT)

Status: code verified, 38 files readable, 22 matches

[1297] Code ↔ Paper doi:10.1038/s41593-026-02354-5 [paper, repository]

Focal astrocyte loss reveals nuclear translocation during lesion repopulation.

Journal: Nature neuroscience

Authors' code: alasne-uzh/migratory-astrocytes-ST (no license), doi:10.17632/xw8fv8gt8f.1 (no license)

Status: code verified, 9 files readable, 6 matches

[1298] Code ↔ Paper doi:10.1038/s41593-026-02362-5 [paper, repository]

Replay of procedural memory is independent of the hippocampus.

Journal: Nature neuroscience

Authors' code: SainsburyWellcomeCentre/BakingTray (LGPL-3.0), Zenodo 363160 (no license), lindermanlab/ppseq.jl (MIT), stephensonjoneslab/thompson_et_al_2026 (MIT)

Status: code verified, 404 files readable, 19 matches

[1299] Code ↔ Paper doi:10.1038/s41598-026-61560-0 [paper, repository]

An automated derivative-based method for detection of motor evoked potential onset latencies in multi-muscle transcranial magnetic stimulation studies.

Journal: Scientific reports

Authors' code: Zenodo 16966802 (CC-BY-4.0), rowbe1/mep_latency (no license)

Status: code verified, 4 files readable, 3 matches

[1300] doi:10.1083/jcb.202509110 [paper, data]

The missing link: Piccolino is essential for tethering synaptic vesicles to rod photoreceptor ribbons.

Journal: The Journal of cell biology

Status: data only, 1 dataset cited

Also: by category, author, journal, institution, tool or dataset; the search; the DOI lookup for any paper read, with or without a page.